View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1029_low_1 (Length: 381)

Name: NF1029_low_1
Description: NF1029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1029_low_1
NF1029_low_1
[»] chr2 (45 HSPs)
chr2 (11-381)||(45235742-45236109)
chr2 (90-246)||(14530295-14530452)
chr2 (90-245)||(10543676-10543832)
chr2 (82-228)||(10546157-10546303)
chr2 (83-228)||(14444724-14444867)
chr2 (90-246)||(23397743-23397896)
chr2 (85-246)||(17896236-17896397)
chr2 (90-246)||(8455319-8455474)
chr2 (103-246)||(44643499-44643642)
chr2 (83-246)||(25249734-25249895)
chr2 (99-246)||(4516363-4516509)
chr2 (103-246)||(11514413-11514554)
chr2 (100-248)||(99278-99423)
chr2 (90-245)||(5841006-5841162)
chr2 (98-243)||(19977725-19977869)
chr2 (90-251)||(9671152-9671311)
chr2 (107-246)||(21377093-21377231)
chr2 (90-246)||(24200626-24200783)
chr2 (103-246)||(39914322-39914464)
chr2 (118-246)||(12023950-12024076)
chr2 (90-246)||(25079720-25079876)
chr2 (90-246)||(14544040-14544198)
chr2 (90-243)||(21779264-21779414)
chr2 (91-246)||(7214511-7214667)
chr2 (103-246)||(17623541-17623683)
chr2 (98-200)||(30826060-30826159)
chr2 (104-151)||(31158456-31158503)
chr2 (107-226)||(32781308-32781426)
chr2 (82-159)||(36871555-36871631)
chr2 (121-245)||(5450263-5450387)
chr2 (84-246)||(17667979-17668140)
chr2 (103-162)||(23488541-23488602)
chr2 (90-200)||(40762237-40762346)
chr2 (90-159)||(25632572-25632641)
chr2 (103-159)||(24890474-24890530)
chr2 (103-147)||(34766330-34766374)
chr2 (100-158)||(24059009-24059067)
chr2 (106-192)||(26684639-26684725)
chr2 (99-157)||(31525771-31525829)
chr2 (90-148)||(40579752-40579810)
chr2 (107-243)||(17380257-17380391)
chr2 (107-148)||(33795359-33795400)
chr2 (90-138)||(8575979-8576027)
chr2 (103-159)||(24860004-24860060)
chr2 (98-178)||(39499241-39499321)
[»] chr1 (51 HSPs)
chr1 (83-246)||(18724542-18724703)
chr1 (84-246)||(46247950-46248111)
chr1 (103-251)||(14617033-14617180)
chr1 (84-246)||(46991804-46991965)
chr1 (103-246)||(27474281-27474422)
chr1 (91-246)||(6925100-6925254)
chr1 (103-246)||(23768336-23768478)
chr1 (90-246)||(34725101-34725254)
chr1 (98-246)||(47214511-47214656)
chr1 (98-246)||(32632568-32632714)
chr1 (84-247)||(38478279-38478439)
chr1 (83-159)||(45402182-45402258)
chr1 (83-246)||(18944643-18944808)
chr1 (90-246)||(30395729-30395886)
chr1 (103-228)||(35253203-35253325)
chr1 (103-246)||(27201647-27201791)
chr1 (103-245)||(45812553-45812692)
chr1 (103-246)||(18741973-18742119)
chr1 (90-246)||(20004093-20004250)
chr1 (103-246)||(35117781-35117926)
chr1 (111-246)||(41319830-41319964)
chr1 (81-243)||(8197046-8197207)
chr1 (90-246)||(19414439-19414592)
chr1 (90-159)||(4349724-4349793)
chr1 (103-246)||(2435802-2435945)
chr1 (107-246)||(11596513-11596650)
chr1 (98-248)||(19701568-19701718)
chr1 (103-225)||(45264415-45264537)
chr1 (109-247)||(25468285-25468422)
chr1 (103-244)||(9939463-9939606)
chr1 (90-228)||(10668243-10668382)
chr1 (103-246)||(12126853-12126993)
chr1 (90-228)||(35005141-35005280)
chr1 (83-159)||(1517307-1517383)
chr1 (83-159)||(31382210-31382286)
chr1 (103-147)||(33594147-33594191)
chr1 (83-151)||(50606497-50606565)
chr1 (111-246)||(20036220-20036355)
chr1 (103-152)||(6358215-6358264)
chr1 (82-159)||(23796551-23796628)
chr1 (106-159)||(43768225-43768278)
chr1 (107-248)||(44485129-44485269)
chr1 (107-159)||(15505650-15505702)
chr1 (103-151)||(42304223-42304271)
chr1 (104-245)||(18335305-18335445)
chr1 (93-150)||(30682907-30682963)
chr1 (103-152)||(43207589-43207638)
chr1 (103-159)||(10378751-10378807)
chr1 (103-246)||(17470363-17470504)
chr1 (107-214)||(31442409-31442517)
chr1 (103-159)||(35019316-35019371)
[»] chr7 (51 HSPs)
chr7 (103-246)||(47077871-47078011)
chr7 (83-246)||(32758238-32758398)
chr7 (103-247)||(10693089-10693230)
chr7 (90-251)||(40463849-40464008)
chr7 (103-246)||(2541035-2541178)
chr7 (91-246)||(33871914-33872067)
chr7 (103-246)||(35334832-35334972)
chr7 (85-246)||(42805501-42805663)
chr7 (90-246)||(21172012-21172165)
chr7 (90-246)||(42476850-42477003)
chr7 (90-246)||(29907394-29907550)
chr7 (83-241)||(42391096-42391251)
chr7 (83-218)||(7879643-7879777)
chr7 (83-246)||(19426886-19427047)
chr7 (103-246)||(42798646-42798788)
chr7 (81-246)||(11617582-11617746)
chr7 (103-246)||(23419690-23419832)
chr7 (104-246)||(34626225-34626365)
chr7 (107-246)||(13805079-13805216)
chr7 (107-225)||(16341276-16341394)
chr7 (107-246)||(28362165-28362303)
chr7 (83-246)||(43557449-43557614)
chr7 (90-246)||(48735125-48735279)
chr7 (107-224)||(18512473-18512588)
chr7 (106-243)||(28078151-28078286)
chr7 (85-246)||(27629611-27629771)
chr7 (103-228)||(38262212-38262336)
chr7 (90-244)||(47716438-47716593)
chr7 (103-246)||(19265792-19265932)
chr7 (107-159)||(27889336-27889388)
chr7 (90-246)||(39123867-39124027)
chr7 (103-246)||(3469191-3469337)
chr7 (108-246)||(19266427-19266564)
chr7 (90-147)||(45018926-45018983)
chr7 (106-246)||(5180174-5180315)
chr7 (205-248)||(6736865-6736908)
chr7 (127-246)||(8148985-8149104)
chr7 (111-246)||(14099030-14099164)
chr7 (111-246)||(14409047-14409181)
chr7 (103-246)||(22698983-22699128)
chr7 (83-134)||(36602535-36602586)
chr7 (106-200)||(38604550-38604642)
chr7 (83-138)||(42495858-42495913)
chr7 (180-246)||(44123713-44123779)
chr7 (109-212)||(2662958-2663057)
chr7 (181-246)||(7193062-7193127)
chr7 (103-228)||(18747481-18747606)
chr7 (90-244)||(11741774-11741925)
chr7 (103-151)||(33500586-33500634)
chr7 (125-246)||(46354171-46354293)
chr7 (134-246)||(48123531-48123642)
[»] chr5 (30 HSPs)
chr5 (83-246)||(24448867-24449029)
chr5 (85-246)||(43334179-43334341)
chr5 (90-246)||(38879558-38879715)
chr5 (106-246)||(27328729-27328870)
chr5 (90-246)||(41014296-41014450)
chr5 (84-246)||(35710290-35710449)
chr5 (90-228)||(32703419-32703554)
chr5 (85-246)||(8169982-8170140)
chr5 (90-165)||(16957371-16957446)
chr5 (90-243)||(12006331-12006485)
chr5 (105-218)||(43574611-43574723)
chr5 (103-147)||(39801591-39801635)
chr5 (110-251)||(2838750-2838890)
chr5 (90-246)||(4619107-4619264)
chr5 (107-246)||(22600431-22600569)
chr5 (90-246)||(28516436-28516592)
chr5 (106-152)||(10306493-10306539)
chr5 (103-149)||(25622533-25622579)
chr5 (180-246)||(37024646-37024712)
chr5 (98-159)||(7097771-7097832)
chr5 (90-151)||(21784335-21784396)
chr5 (180-245)||(22861758-22861823)
chr5 (103-175)||(30006372-30006444)
chr5 (103-198)||(16880663-16880757)
chr5 (103-200)||(5873338-5873433)
chr5 (103-212)||(19142959-19143066)
chr5 (103-246)||(208943-209085)
chr5 (90-159)||(34154817-34154886)
chr5 (96-152)||(4654424-4654480)
chr5 (103-159)||(13774928-13774984)
[»] chr8 (43 HSPs)
chr8 (103-245)||(29521701-29521842)
chr8 (80-246)||(36720773-36720938)
chr8 (103-246)||(13160679-13160820)
chr8 (103-246)||(28817642-28817784)
chr8 (84-246)||(35261656-35261817)
chr8 (103-246)||(12670266-12670406)
chr8 (90-246)||(45071242-45071396)
chr8 (84-246)||(30454094-30454253)
chr8 (83-246)||(8897760-8897922)
chr8 (90-246)||(39460997-39461154)
chr8 (103-246)||(44781520-44781664)
chr8 (98-246)||(2626496-2626646)
chr8 (103-246)||(20284085-20284231)
chr8 (107-246)||(24365079-24365218)
chr8 (80-246)||(44742511-44742677)
chr8 (107-217)||(5135309-5135418)
chr8 (103-246)||(21070713-21070860)
chr8 (90-246)||(12625866-12626022)
chr8 (103-246)||(44530126-44530268)
chr8 (103-246)||(26954109-26954254)
chr8 (82-246)||(6760799-6760964)
chr8 (110-246)||(20869523-20869654)
chr8 (98-200)||(29877117-29877218)
chr8 (103-243)||(18164776-18164914)
chr8 (82-159)||(26102580-26102657)
chr8 (106-227)||(36918120-36918240)
chr8 (98-246)||(22598134-22598280)
chr8 (106-150)||(28407475-28407519)
chr8 (105-212)||(8483956-8484062)
chr8 (103-200)||(19729365-19729459)
chr8 (103-246)||(7136543-7136687)
chr8 (103-151)||(16013527-16013575)
chr8 (90-246)||(17823553-17823708)
chr8 (83-200)||(20869946-20870064)
chr8 (85-246)||(25250499-25250661)
chr8 (103-241)||(31457155-31457291)
chr8 (103-224)||(389642-389764)
chr8 (180-246)||(28407393-28407459)
chr8 (106-246)||(24245428-24245565)
chr8 (171-244)||(30962857-30962929)
chr8 (90-159)||(40604909-40604977)
chr8 (84-136)||(27468089-27468141)
chr8 (103-147)||(27507985-27508029)
[»] scaffold0057 (3 HSPs)
scaffold0057 (81-246)||(46808-46972)
scaffold0057 (103-246)||(24788-24925)
scaffold0057 (106-152)||(46726-46772)
[»] chr4 (56 HSPs)
chr4 (85-200)||(25629072-25629186)
chr4 (103-246)||(5648236-5648377)
chr4 (105-246)||(6430644-6430783)
chr4 (90-246)||(14983811-14983966)
chr4 (83-243)||(17043391-17043549)
chr4 (103-246)||(30639357-30639498)
chr4 (103-246)||(40915806-40915947)
chr4 (88-246)||(21646941-21647100)
chr4 (90-246)||(16911539-16911696)
chr4 (82-200)||(20639653-20639771)
chr4 (90-246)||(44363133-44363290)
chr4 (85-246)||(48598823-48598981)
chr4 (110-240)||(7385499-7385628)
chr4 (90-246)||(20224961-20225114)
chr4 (103-246)||(54730226-54730371)
chr4 (83-246)||(11054144-11054304)
chr4 (83-246)||(47528526-47528686)
chr4 (103-246)||(35567147-35567289)
chr4 (107-246)||(47441550-47441688)
chr4 (83-246)||(16408597-16408761)
chr4 (103-228)||(41018810-41018933)
chr4 (103-242)||(19027829-19027967)
chr4 (105-246)||(39029078-39029219)
chr4 (103-229)||(47443951-47444076)
chr4 (90-233)||(29207901-29208041)
chr4 (82-151)||(30352575-30352644)
chr4 (98-159)||(30690187-30690248)
chr4 (80-149)||(33836480-33836549)
chr4 (81-158)||(38786673-38786750)
chr4 (83-246)||(23501770-23501928)
chr4 (90-149)||(38755911-38755970)
chr4 (105-148)||(44718641-44718684)
chr4 (105-244)||(49938611-49938746)
chr4 (107-246)||(54966998-54967135)
chr4 (140-246)||(14590814-14590920)
chr4 (83-246)||(25343164-25343328)
chr4 (85-228)||(9832311-9832451)
chr4 (103-152)||(20908652-20908701)
chr4 (180-245)||(23580300-23580365)
chr4 (83-148)||(32484307-32484372)
chr4 (106-159)||(51865057-51865110)
chr4 (90-150)||(11394924-11394984)
chr4 (90-150)||(11404651-11404711)
chr4 (99-151)||(16494290-16494342)
chr4 (107-151)||(47482870-47482914)
chr4 (103-243)||(54175043-54175184)
chr4 (103-200)||(7909296-7909392)
chr4 (107-158)||(32478811-32478862)
chr4 (108-159)||(49796860-49796911)
chr4 (103-149)||(8820581-8820627)
chr4 (107-237)||(25463108-25463237)
chr4 (103-192)||(30581481-30581571)
chr4 (83-137)||(35532077-35532131)
chr4 (90-148)||(40553940-40553998)
chr4 (107-152)||(21489158-21489203)
chr4 (83-152)||(36816380-36816449)
[»] chr3 (49 HSPs)
chr3 (84-246)||(40272809-40272970)
chr3 (82-246)||(13730597-13730762)
chr3 (90-244)||(13628793-13628948)
chr3 (106-246)||(46421054-46421195)
chr3 (103-248)||(34420659-34420804)
chr3 (98-246)||(26573126-26573273)
chr3 (83-246)||(26869706-26869867)
chr3 (106-246)||(8247706-8247847)
chr3 (85-200)||(54484735-54484850)
chr3 (108-246)||(12914056-12914193)
chr3 (90-246)||(22122920-22123073)
chr3 (103-246)||(29366736-29366880)
chr3 (90-246)||(39203515-39203668)
chr3 (90-246)||(22609765-22609919)
chr3 (138-246)||(45620879-45620987)
chr3 (85-246)||(1217089-1217247)
chr3 (85-237)||(516417-516571)
chr3 (90-246)||(33235529-33235685)
chr3 (103-246)||(6411838-6411979)
chr3 (103-246)||(16735440-16735581)
chr3 (90-217)||(10795426-10795554)
chr3 (90-159)||(25517173-25517242)
chr3 (84-248)||(25944466-25944630)
chr3 (104-228)||(54374362-54374486)
chr3 (83-159)||(52926215-52926291)
chr3 (103-246)||(53996581-53996724)
chr3 (85-244)||(5173717-5173876)
chr3 (103-242)||(7942993-7943131)
chr3 (103-154)||(44403571-44403622)
chr3 (103-218)||(45948854-45948968)
chr3 (180-246)||(7696977-7697043)
chr3 (100-150)||(10300585-10300635)
chr3 (180-246)||(10870043-10870109)
chr3 (104-246)||(9607202-9607345)
chr3 (103-246)||(829458-829600)
chr3 (90-212)||(31592882-31593001)
chr3 (103-159)||(34771380-34771436)
chr3 (103-151)||(40968611-40968659)
chr3 (103-213)||(43114884-43114995)
chr3 (90-199)||(45786217-45786327)
chr3 (84-159)||(15797305-15797380)
chr3 (84-159)||(24578010-24578085)
chr3 (83-150)||(24851297-24851364)
chr3 (103-228)||(33926100-33926224)
chr3 (98-159)||(31904867-31904929)
chr3 (103-212)||(14986990-14987100)
chr3 (103-159)||(24577920-24577976)
chr3 (83-135)||(47624208-47624260)
chr3 (194-246)||(53062037-53062089)
[»] chr6 (24 HSPs)
chr6 (83-246)||(1346941-1347101)
chr6 (90-246)||(1354760-1354913)
chr6 (107-246)||(12221935-12222075)
chr6 (85-240)||(29355853-29356009)
chr6 (83-246)||(9161100-9161263)
chr6 (90-258)||(32728160-32728326)
chr6 (103-246)||(3815093-3815235)
chr6 (84-247)||(2166407-2166571)
chr6 (84-247)||(2178040-2178204)
chr6 (84-150)||(24097649-24097715)
chr6 (90-151)||(12885984-12886045)
chr6 (104-159)||(32579488-32579543)
chr6 (85-159)||(13267788-13267862)
chr6 (80-149)||(12892082-12892151)
chr6 (90-246)||(15866042-15866195)
chr6 (106-155)||(18277212-18277261)
chr6 (90-159)||(23930130-23930199)
chr6 (85-149)||(6808468-6808532)
chr6 (82-138)||(20906781-20906837)
chr6 (108-159)||(383781-383832)
chr6 (104-152)||(10734922-10734970)
chr6 (104-152)||(11395831-11395879)
chr6 (109-246)||(14553489-14553626)
chr6 (106-138)||(29016301-29016333)
[»] scaffold0311 (1 HSPs)
scaffold0311 (103-246)||(10787-10929)
[»] scaffold0258 (1 HSPs)
scaffold0258 (85-251)||(13022-13186)
[»] scaffold0168 (1 HSPs)
scaffold0168 (85-246)||(30556-30714)
[»] scaffold0049 (1 HSPs)
scaffold0049 (103-246)||(58954-59098)
[»] scaffold1176 (1 HSPs)
scaffold1176 (91-246)||(1591-1743)
[»] scaffold0018 (1 HSPs)
scaffold0018 (90-218)||(72870-72998)
[»] scaffold0223 (1 HSPs)
scaffold0223 (90-228)||(11126-11261)
[»] scaffold0187 (2 HSPs)
scaffold0187 (109-246)||(10072-10206)
scaffold0187 (109-246)||(20400-20534)
[»] scaffold0005 (1 HSPs)
scaffold0005 (140-246)||(226458-226564)
[»] scaffold0015 (1 HSPs)
scaffold0015 (90-159)||(48637-48706)
[»] scaffold0180 (1 HSPs)
scaffold0180 (103-159)||(24149-24205)
[»] scaffold0031 (1 HSPs)
scaffold0031 (180-246)||(43106-43172)
[»] scaffold0254 (1 HSPs)
scaffold0254 (178-247)||(4133-4202)


Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 11 - 381
Target Start/End: Original strand, 45235742 - 45236109
Alignment:
Q  11 agaatattaaaaagtgtgtgctaggattagtgttacttgcactttgtgctttattgttgcaccaactagaataaaaaaggggcaacttggtacactaaag 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45235742 agaatattaaaaagtgagtgctaggattagtgttacttgcactttgtgctttattgttgcaccaactagaataaaa-aggggcaacttggtacactaaag 45235840  T
Q  111 ctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttga 210  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  45235841 ctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggacttga 45235940  T
Q  211 actcgtgatctttcagtcgcacgacaacaactttactggttacaccaactaaaatgtgaaaaacattttacacgcagggacgcccatagttccctgccct 310  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45235941 actcgtgatctttcagtcacatgagaacaactttactggttacaccaactaaaatgtgaaaaacattttacacgcagggatgcccatagttccctgccct 45236040  T
Q  311 aactcctgagatagtataggtgaatagaagagaccctctcatnnnnnnntgaataggacttcaaacatcaa 381  Q
     | |  | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  45236041 tattttttagatagtataggtgaatagaagagaccctctcat--aaaaatgaataggacttcaaacatcaa 45236109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 14530452 - 14530295
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||||||||  || |||||||| || |||| ||||||| || ||||| |     
T  14530452 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtt-ttttatac 14530354  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  14530353 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 14530295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 10543832 - 10543676
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||||  |||||||| ||  ||| ||||||| || |||||||     
T  10543832 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt-ttttacac 10543734  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    ||||| | ||||| || |||||||| ||||| ||||||||| || |||||||||||||    
T  10543733 aagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 82 - 228
Target Start/End: Complemental strand, 10546303 - 10546157
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatt 181  Q
    ||||||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| || ||    
T  10546303 taaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 10546204  T
Q  182 ttacagaagagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    ||| | |||||  |||||| || |||||||| ||||| |||||||||    
T  10546203 ttatacaagaggatgtttccaggacttgaacccgtgacctttcagtc 10546157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 14444867 - 14444724
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| ||||||| |||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||| | ||| ||| ||||||| |  |||    
T  14444867 aaaaaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt--ttt 14444770  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    |||| ||||| ||||||| || |||||||| ||||| ||| |||||    
T  14444769 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtc 14444724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 23397896 - 23397743
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| |||||||| | |||||| ||||||||||| |||||||| || |||| ||||||   ||||||||| ||    
T  23397896 gggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccc---tattttacacaa 23397800  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| | ||| ||||||||| || ||||||||||||||    
T  23397799 gaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttac 23397743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 17896397 - 17896236
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||| | | ||||||||||||| |||||| |||||| | |||||| ||||||||||| || ||||| ||  ||| |||||||||| |||||    
T  17896397 aaaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctattttttta 17896298  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || |||||  ||||||||| |||||||  ||||| ||||| ||| || ||||||||||||||    
T  17896297 cacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttac 17896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 8455319 - 8455474
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||| ||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| |||||||  | ||||||| ||    
T  8455319 gggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtgttttacacaa 8455417  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  8455418 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 8455474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 44643642 - 44643499
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||| ||  |||| ||  ||| |||| || || |||||| |||||| || ||||||    
T  44643642 cactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttttacggaagaggctctttcta 44643543  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||||| ||||| ||||||||| || ||  ||||||||||    
T  44643542 gaacttgaacacgtgacctttcagtcacatgatgacaactttac 44643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 25249734 - 25249895
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||||||||| |||||||| |||||  |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||     
T  25249734 aaaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgt--ttg 25249831  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||||||||||| |  |||||||| ||||| ||| ||||| || ||||||||||||||    
T  25249832 tacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaactttac 25249895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 4516363 - 4516509
Alignment:
Q  99 ggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtt 198  Q
    |||||||||||||| || |||||| |||||| |||||||| |||||||| || |||||||| ||  ||| || |||| || ||||||| ||||| |||||    
T  4516363 ggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgtt-ttttacacaagaggctgtt 4516461  T
Q  199 tctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||||||||   |||| ||||||||| |  ||||||||||||||    
T  4516462 tctagaacttgaatatgtgacctttcagtcacgtgacaacaactttac 4516509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 11514554 - 11514413
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| ||  ||| ||||  | || ||||||| ||||| ||||||| |    
T  11514554 cactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttactttgtt-ttttacacaagaggctgtttcca 11514457  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | | |||||| ||||| ||| ||||| || ||||||||||||||    
T  11514456 ggagttgaacccgtgaccttccagtcacatgacaacaactttac 11514413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 248
Target Start/End: Original strand, 99278 - 99423
Alignment:
Q  100 gtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgttt 199  Q
    ||||||||||||||||||||||  |||||||| |||||| | ||||||||| |||||||| ||  ||| || || | || ||||||  ||||| ||||||    
T  99278 gtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtt-ttttac--aagaggctgttt 99374  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    |||| |||||||| ||||| ||||||||| |  ||||||||||||||||    
T  99375 ctaggacttgaacccgtgacctttcagtcacgtgacaacaactttactg 99423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 5841162 - 5841006
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt-ttg-tgtattgcacatagctttaccctattattttacag 187  Q
    |||||||| ||| |||||||||||||||||| |  ||||| |||||||| |||||||||| ||| ||||||| ||  | | |||||||||| |||||||     
T  5841162 gggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatt-ttttacac 5841064  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    || || |||||||||| |||||||| ||||| ||| ||||| || |||||||||||||    
T  5841063 aaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 19977725 - 19977869
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| |||||||||||||||||||  | |||  |||||||| ||||||||||| |||||||| ||  | | ||| |||||| ||||||| ||||| ||||    
T  19977725 tggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatt-ttttacaaaagaggctgt 19977823  T
Q  198 ttctagaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    ||| ||||||||||| ||||| ||||| ||| || |||||||||||    
T  19977824 ttccagaacttgaacccgtgacctttcggtcacatgacaacaactt 19977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 9671311 - 9671152
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  9671311 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 9671215  T
Q  190 gagactgtttctagaacttgaactcgtgatcttt-cagtcgcacgacaacaactttactggtt 251  Q
    ||| ||||||| || | |||||| |||||  ||| ||||| || |||||||||||||| ||||    
T  9671214 gaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaactttaccggtt 9671152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 21377093 - 21377231
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    ||||||||| |||||| |||||  |||||||| ||||||||||| ||| |||| ||  ||| ||||||| || ||||||| |||||  ||||||||  ||    
T  21377093 aaagctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgtt-ttttacacaagaggatgtttctatgac 21377191  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||||| | ||||||||| || ||||||||||||||    
T  21377192 ttgaactcgtaacctttcagtcacatgacaacaactttac 21377231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 24200626 - 24200783
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| ||||||||||| | |||||  |||||| |||||||| ||||||||||||  |||||||| ||  ||| ||||||| || |||||||     
T  24200626 gggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtt-ttttacac 24200724  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || |||||||| |||||  |||||||| || ||||||||||||||    
T  24200725 aagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttac 24200783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 39914322 - 39914464
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||||  |||||||| ||| | | ||||||| || ||||||| |||||  |||||| |    
T  39914322 cactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttcca 39914420  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||| | ||||| ||| ||||| || ||||||||||||||    
T  39914421 gtacttgatcccgtgaccttccagtcacatgacaacaactttac 39914464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 12023950 - 12024076
Alignment:
Q  118 atacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtg 217  Q
    ||||| |||||| |||| ||| ||||||||||| |||||||| ||  ||| ||||||| ||  |||||| ||||| ||||||| || |||||||| ||||    
T  12023950 atacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtt--tttacacaagaggctgtttccaggacttgaacccgtg 12024047  T
Q  218 atctttcagtcgcacgacaacaactttac 246  Q
    | ||||||||| || ||||||||||||||    
T  12024048 acctttcagtcacatgacaacaactttac 12024076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 25079720 - 25079876
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||  ||||||| |||||| |||||||| ||||||||||  |||||||| ||  | | ||||| | || ||||||| ||    
T  25079720 gggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaa 25079819  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||  ||||||||  |||||||| ||||| ||| ||||| || ||||||||||||||    
T  25079820 gaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttac 25079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 14544198 - 14544040
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtg--tattgcacatagctttaccctattattttacag 187  Q
    |||||||||||| |||||||||||||||||||| ||||||  ||||||| ||| |||||||| ||  ||||||||  ||  ||||||| || || ||||     
T  14544198 gggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctacac 14544099  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || || || ||  || | ||||||||| || ||||||||||||||    
T  14544098 aagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttac 14544040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 21779264 - 21779414
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  | | ||||||   | ||||||| ||    
T  21779264 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccc---tgttttacacaa 21779360  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    ||| |||| || || |||||||| ||||| ||||||||| || |||||||||||    
T  21779361 gaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaactt 21779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 246
Target Start/End: Complemental strand, 7214667 - 7214511
Alignment:
Q  91 ggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacaga 188  Q
    |||||| |||| ||||||| ||| |||||||| || ||| | |||||| || |||||||||  |||||||| ||  ||| ||||||| | |||||||| |    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgt-attttacaca 7214569  T
Q  189 agagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||||||| |  |||||||| | ||| ||||||||| || ||||||||||||||    
T  7214568 agagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttac 7214511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 17623683 - 17623541
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||| || |||||| ||| |  |||||||| | ||||||||| |||||||| ||  ||| |||||||  | ||||||| |||||  |||||| |    
T  17623683 cactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgat-ttttacacaagaggttgtttcga 17623585  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||| |||||||| ||||||||||||||    
T  17623584 ggacttgaacccgtgaccttccagtcgcatgacaacaactttac 17623541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 30826159 - 30826060
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| |||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||| ||  | | |||||||||  ||||||| ||||| ||||    
T  30826159 tggtgcactaaagctcccgcatatgtagggtctgggaaggg-ttccaccatttggtgtattgtacgcaaccttaccctat--ttttacacaagaggctgt 30826063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 31158456 - 31158503
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  31158456 actaaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 31158503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 226
Target Start/End: Original strand, 32781308 - 32781426
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||  ||||||||||||||| ||||||||||| |||||||| ||  ||  ||||||| || ||||||| |||||  ||||||    ||    
T  32781308 aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagaggttgtttccgagac 32781406  T
Q  207 ttgaactcgtgatctttcag 226  Q
    |||||||||||| |||||||    
T  32781407 ttgaactcgtgacctttcag 32781426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 36871631 - 36871555
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||| |||||||  ||| |||||||||||||||||||| | |||| |||||||| ||||||||||| ||||||||    
T  36871631 taaaaaaagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccatttggtgtattg 36871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 5450387 - 5450263
Alignment:
Q  121 cgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatc 220  Q
    |||||||||  ||||||| ||||||| ||| |||||||| ||  ||| ||||| | || ||||||| |||||  |||||| || | |||||| ||||| |    
T  5450387 cgtagggtccaggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacc 5450288  T
Q  221 tttcagtcgcacgacaacaacttta 245  Q
    |||||||| || |||||||||||||    
T  5450287 tttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 17668140 - 17667979
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| |||||||||||||  ||||| |||||  | |||||| | ||||||||| |||||||| ||  ||| |||||||  | ||||    
T  17668140 aaaaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgat-tttt 17668042  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| |||||  | |||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  17668041 acacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 17667979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 23488602 - 23488541
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccacca--ttttgtgtattgcac 162  Q
    ||||||||||| |||||||| |||||| |||||||| ||||||||  |||||||||||||||    
T  23488602 cactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcac 23488541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 40762237 - 40762346
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||||||||||| |||||| ||||||  |||| || ||||||||||| |||||||| || |||| |||||| | | ||||||| ||    
T  40762237 gggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttaccc-agttttttacacaa 40762335  T
Q  190 gagactgtttc 200  Q
    ||| |||||||    
T  40762336 gaggctgtttc 40762346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 25632641 - 25632572
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||  ||| |||||||||||||||||||||| |||  |||||||  ||||||||||| ||||||||    
T  25632641 gggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattg 25632572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 24890530 - 24890474
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||| || ||||||||    
T  24890530 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattg 24890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 34766374 - 34766330
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccacca 147  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||    
T  34766374 cactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 24059009 - 24059067
Alignment:
Q  100 gtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtatt 158  Q
    |||||||||||||||| |||||| |||||| || ||||| ||||||||| | |||||||    
T  24059009 gtacactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 26684639 - 26684725
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagag 192  Q
    ||||||||||||||||| |||||  |||||| | ||||||||||| || ||||| ||  ||| ||||| |||| ||||||| |||||    
T  26684639 taaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagag 26684725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 31525829 - 31525771
Alignment:
Q  99 ggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtat 157  Q
    |||||||||||||||||||||| | ||||||||| || || ||||| ||||| ||||||    
T  31525829 ggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 40579752 - 40579810
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat 148  Q
    |||||||  ||| |||||||||||||||||||  |||||| |||||||| |||||||||    
T  40579752 gggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 243
Target Start/End: Original strand, 17380257 - 17380391
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    ||||||||||||| || ||||||  ||||||| | ||| ||||| |||||||||||| | | ||||||| |  || |||| |||||  |||||| |  ||    
T  17380257 aaagctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgt--ttatacacaagaggttgtttccaagac 17380354  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    |||||| ||||| ||||| ||| || |||||||||||    
T  17380355 ttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 33795400 - 33795359
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccat 148  Q
    |||||||||||||||  ||||||||||||||| |||||||||    
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccat 33795359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 8576027 - 8575979
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaaggg 138  Q
    ||||||| |||| ||||||||||||| |||||| |||||| ||||||||    
T  8576027 gggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggg 8575979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 24860004 - 24860060
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||||||||||| |||||| | |||||| | | ||||||| ||||||||    
T  24860004 cactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattg 24860060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 39499241 - 39499321
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctatt 178  Q
    |||| |||||||||||||||||||| ||| |  |  ||||| |||||||||||  ||||||| ||  ||||||||||||||    
T  39499241 tggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctatt 39499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 18724542 - 18724703
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||||||||| |||||| ||| |||||||||||||| |||||||| |||||||| |||||  |||| |||||||| ||| ||| ||||||| || |||    
T  18724542 aaaaaaggggcagcttggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtt-ttt 18724639  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  18724640 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 18724703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 46247950 - 46248111
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  |||||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||  ||||||| || ||||    
T  46247950 aaaaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtt-tttt 46248048  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||| ||||||| |  |||||||| |||||  |||||||| || ||||||||||||||    
T  46248049 acacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttac 46248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 14617180 - 14617033
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  | | ||||| | |||||| ||| ||||| ||||||| |    
T  14617180 cactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttattt-acacaagaggctgtttcca 14617082  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttactggtt 251  Q
    | |||||||||||||| ||||||||| || |||||||||||||| ||||    
T  14617081 ggacttgaactcgtgacctttcagtcacatgacaacaactttaccggtt 14617033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 46991965 - 46991804
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| ||||||||||||| |||||| |||||| |||||||| ||||||||||  |||||||| ||| ||| ||||||| || ||||    
T  46991965 aaaaatgggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtt-tttt 46991867  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| |||||  |||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  46991866 acacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 46991804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 27474422 - 27474281
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||  |||||||| ||  |||||| |||| |  ||||||| ||||||||||||| |    
T  27474422 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgt--ttttacacaagagactgtttcca 27474325  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      ||||||||  |||| ||||||||| || ||||||||||||||    
T  27474324 agacttgaacctgtgacctttcagtcacatgacaacaactttac 27474281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 246
Target Start/End: Complemental strand, 6925254 - 6925100
Alignment:
Q  91 ggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaag 190  Q
    ||||||| ||| |||||||||||||||||||| |||| | |||||||| ||||||||||  ||||||||  |  ||| |||||||||| ||||||| |||    
T  6925254 ggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatt-ttttacacaag 6925156  T
Q  191 agactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || || |||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  6925155 aggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 6925100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 23768336 - 23768478
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||| ||  ||| ||||||| || ||||||| ||||| ||||||| |    
T  23768336 cactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttcca 23768434  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      ||||||||  |||| ||| ||||| || ||||||||||||||    
T  23768435 tgacttgaacctgtgaccttacagtcacatgacaacaactttac 23768478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 34725101 - 34725254
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   ||||| ||    
T  34725101 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgtt---ttacacaa 34725197  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  34725198 gaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 34725254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 47214656 - 47214511
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| ||||| |||||||||||| | ||||||||||||||| ||||||||||| |||||||| ||  | | ||||||   | ||||| | ||||||||||    
T  47214656 tggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccc---tgttttaaacaagagactgt 47214560  T
Q  198 ttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  47214559 ttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 47214511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 32632568 - 32632714
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| |||| ||||||||||||| | ||||| ||||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||||    
T  32632568 tggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgt 32632665  T
Q  198 ttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| || |||||||| ||||| |||||||||  | ||||||||||||||    
T  32632666 ttccaggacttgaacccgtgacctttcagtcatatgacaacaactttac 32632714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 38478279 - 38478439
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| ||||| |||||||||||| | |||||| | |||||| | ||||||||| |||||||| ||  ||| ||||||   | ||||    
T  38478279 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccc---tgtttt 38478375  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    ||| ||||| |||||||||| |||||||| ||||| ||||||||| || |||||||| ||||||    
T  38478376 acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttact 38478439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 45402258 - 45402182
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||| |||||||  ||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  45402258 aaaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattg 45402182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 18944808 - 18944643
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaa-gctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctatta 179  Q
    |||||| |||||||  ||| ||||||| ||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| ||     
T  18944808 aaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgtt- 18944710  T
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| ||  |||||||  |||| ||||||||| || ||||||||||||||    
T  18944709 ttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttac 18944643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 30395729 - 30395886
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||| ||| |||||||||||||||||| |  ||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || |||||||     
T  30395729 gggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacac 30395827  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || |||||||| ||||| |||  |||| || ||||||||||||||    
T  30395828 aagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttac 30395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 35253203 - 35253325
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||||| ||||||| |    
T  35253203 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaagaggctgtttcga 35253299  T
Q  203 gaacttgaactcgtgatctttcagtc 228  Q
    | |||||||| |||||||||||||||    
T  35253300 ggacttgaacccgtgatctttcagtc 35253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 27201791 - 27201647
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| | |||| |||||||| ||||||||||||  |||||||| ||  ||| ||||||| || | | ||| ||||| |||||||    
T  27201791 cactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt-tctgacacaagaggctgtttc 27201693  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| | ||| ||||||||| || ||||||||||||||    
T  27201692 caggacttgaacccatgacctttcagtcacatgacaacaactttac 27201647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 45812553 - 45812692
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | ||||| ||||||||| ||||||||||| |||||||| |   ||| ||||||   | ||||||| ||||||||||||  |    
T  45812553 cactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccc---tcttttacacaagagactgttttca 45812649  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    | ||||||||  |||| ||||||||| || |||||||||||||    
T  45812650 ggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 18741973 - 18742119
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgttt- 199  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||  |||||||| ||  ||| ||||||| || ||||| | || |||||||||     
T  18741973 cactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttatacaaaagactgtttc 18742072  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |  | |||||| | ||| ||||||||| || ||||||||||||||    
T  18742073 ccaagatttgaacccttgacctttcagtcacatgacaacaactttac 18742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 20004093 - 20004250
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||| |  |||||||||||||| |||||||||  || |||||||| ||  ||| ||||| | || |||||||     
T  20004093 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtt-ttttacac 20004191  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     |||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  20004192 gagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 20004250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 35117781 - 35117926
Alignment:
Q  103 cactaaagctcccgcat-acgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgttt 199  Q
    |||||||||||| |||| ||| |||||| |||||||| ||||| ||||||  |||||||| ||| ||| ||||||| | |||||||| ||||| || |||    
T  35117781 cactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgt-attttacacaagaggctattt 35117879  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | || |||||||| ||||| ||||||||| |  ||||||||||||||    
T  35117880 ccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 35117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 41319830 - 41319964
Alignment:
Q  111 ctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttga 210  Q
    |||||||||| | |||||  |||||||| ||||| ||||| |||||||| ||  ||| ||||||| || ||||||| ||||||||||||| || |||| |    
T  41319830 ctcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtt-ttttacacaagagactgtttccaggacttaa 41319928  T
Q  211 actcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||  |||| ||||||||| || ||||||||||||||    
T  41319929 acctgtgacctttcagtcacatgacaacaactttac 41319964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 243
Target Start/End: Complemental strand, 8197207 - 8197046
Alignment:
Q  81 ataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattat 180  Q
    |||||||| |||||||  ||||||||||||||||  |||||| |||||| | |||||| ||| ||||||| ||||| || || |||| ||||| | || |    
T  8197207 ataaaaaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgtt-t 8197109  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    |||||| ||||| |  || | || |||||||| ||||| ||||||||| || |||||||||||    
T  8197108 tttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaactt 8197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 19414592 - 19414439
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||  |||||||| ||||||||||| |||||||| ||  ||| ||| ||| ||   ||||| ||    
T  19414592 gggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgtt---ttacataa 19414496  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| || ||||||| |||||||| ||||| |||||||||  | ||||||||||||||    
T  19414495 gaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttac 19414439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 4349793 - 4349724
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| ||||||||    
T  4349793 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattg 4349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 2435802 - 2435945
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||||||||| || |||||  || ||||| |||||||||||| |||||||| ||  ||  |||||||||| ||| ||| | ||| |||||||     
T  2435802 cactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatt-tttcacacaggaggctgtttcc 2435900  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || |||||||| ||||| ||||||||| |  ||||||||||||||    
T  2435901 aggacttgaacccgtgacctttcagtcacgtgacaacaactttac 2435945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 11596650 - 11596513
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||| |||||||  ||  ||| ||||||| |  ||||||| |||||  ||||||||| ||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt--ttttacacaagaggttgtttctaggac 11596553  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||  |||||||| || |||| | |||||||    
T  11596552 ttgaacccgtgacatttcagtcacatgacagccactttac 11596513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 19701718 - 19701568
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactg 196  Q
    |||| |||||||||||||||||||| |||||| ||||||||  ||||||||||| |||||||| ||  | | ||| || | | ||||||| ||||| |||    
T  19701718 tggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatcctta-ccaagttttttacacaagaggctg 19701620  T
Q  197 tttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    |||  |  |||| ||| |||||  |||||||| |||||||||||||||||||    
T  19701619 ttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttactg 19701568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 45264415 - 45264537
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    |||||||||||||||||| | |||||||| |||||| |||||||||||| |||||||||||| ||| |||| || || |||| || |||||  ||||||     
T  45264415 cactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgtt-ttttgcacaagaggttgtttcc 45264513  T
Q  202 agaacttgaactcgtgatctttca 225  Q
    || ||||||||  |||| ||||||    
T  45264514 aggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 25468285 - 25468422
Alignment:
Q  109 agctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaactt 208  Q
    |||||||||||||| ||||||||||||| | ||| ||||||| |||||||| ||  | | |||||||  | ||||||| |||||  |||||| || ||||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgat-ttttacacaagaggttgtttccaggactt 25468383  T
Q  209 gaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    |||| | ||| |||||| || || |||||||||||||||    
T  25468384 gaacccatgacctttcaatcacatgacaacaactttact 25468422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 244
Target Start/End: Complemental strand, 9939606 - 9939463
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggc-tcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgttt 199  Q
    |||||||||||||||||||| |||||| | ||||||  ||||||||||||  |||||||||||  | | ||||| | || | ||| | |||||  |||||    
T  9939606 cactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtt-tcttaaacaagaggttgttt 9939508  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    | || |||||||||||||| ||||||||| || ||||||||||||    
T  9939507 ccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 10668382 - 10668243
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||| | |||||||| |||||||||  || |||||||| ||  | | ||||| | || |||||||     
T  10668382 gggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtt-ttttacac 10668284  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    ||||| ||||||| || |||||||| ||||| |||||||||    
T  10668283 aagaggctgtttccaggacttgaacccgtgacctttcagtc 10668243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 12126853 - 12126993
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | |||||| |||||||| |||||| |||| |||||||| ||  ||| ||||||   | ||||||| ||||  ||||||| |    
T  12126853 cactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccc---tgttttacacaagaagctgtttcca 12126949  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||| ||||| |||||| |  || ||||||||||||||    
T  12126950 gaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 35005280 - 35005141
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| ||||||||| |||||||||| |||||| |||||||| ||||||||||||  |||||||| |   ||| ||||||| || |||||||     
T  35005280 gggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtt-ttttacac 35005182  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    ||||| ||||||  |  |||||||| ||||| |||||||||    
T  35005181 aagaggctgttttcaagacttgaacccgtgacctttcagtc 35005141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 1517307 - 1517383
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||| |||||||  ||| |||||||||||| ||||||| |||||||| |||||| |||||||| || ||||||||    
T  1517307 aaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattg 1517383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 31382210 - 31382286
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||| |||||||  |||||| ||||||||||||||| | ||||||  ||||||| ||||||||||| ||||||||    
T  31382210 aaaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattg 31382286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 33594147 - 33594191
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccacca 147  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  33594147 cactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 50606565 - 50606497
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||| |||||||  ||| |||||||||||||||||| | |||||| |||||||| ||||||||||||    
T  50606565 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttt 50606497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 246
Target Start/End: Complemental strand, 20036355 - 20036220
Alignment:
Q  111 ctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttga 210  Q
    |||| ||||||| |||||| |||||||| | ||||||||| |||||||| ||  |   ||||||| |   |||||| |||||  |||||| || ||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttga 20036256  T
Q  211 actcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||| ||||||||| || ||||||||||||||    
T  20036255 acccgtgacctttcagtcacatgacaacaactttac 20036220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 6358264 - 6358215
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    |||||||| ||| ||||||| ||||||||||||||| |||||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccattttg 6358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 23796628 - 23796551
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||| ||||| |  ||| |||||||||||| ||||| | ||||||||||||||| || |||||||| ||||||||    
T  23796628 taaaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattg 23796551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 43768278 - 43768225
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||| ||||| ||||||||||||||| |||||||| || ||||||||    
T  43768278 taaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattg 43768225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 248
Target Start/End: Original strand, 44485129 - 44485269
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||||||| || |||||||| ||| ||||||| |||||||| ||  ||| ||||| |  | ||||||| ||| |  |||||| || ||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccat-gtcttttacacaagtggttgtttccaggac 44485227  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    |  ||| ||||| |||||| || || ||||||||||||||||    
T  44485228 tataacccgtgacctttcaatcacatgacaacaactttactg 44485269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 15505702 - 15505650
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||||||| |||||  |||||||| ||||||||||| ||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattg 15505650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 42304223 - 42304271
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    ||||||||||||| |||||| |||||| |||||||| ||||||||||||    
T  42304223 cactaaagctcccacatacgcagggtccgggaaggggtcccaccatttt 42304271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 245
Target Start/End: Original strand, 18335305 - 18335445
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||||||| ||||  | ||||| |||| || ||||| |||||  ||||||| ||  | |||||||||| | ||||| | ||||||||||||| ||    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaat-ttttaaacaagagactgtttccag 18335403  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
     |||| |||| |||| ||||||| | || ||||| |||||||    
T  18335404 gactttaacttgtgacctttcagacacatgacaaaaacttta 18335445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 30682963 - 30682907
Alignment:
Q  93 caacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    ||||||||| ||| |||||||||||||||| | |||| |||||||| |||||||||||    
T  30682963 caacttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 43207638 - 43207589
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    ||||||||||| ||||||| |||||||||||||| | |||||||| ||||    
T  43207638 cactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttg 43207589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 10378751 - 10378807
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||||||||| | ||||||   |||||| ||||||||||| ||||||||    
T  10378751 cactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattg 10378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 17470363 - 17470504
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg-tgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||||| |||||| ||| || || | ||| |||||| |||||| ||||||| ||  ||| ||||||| || ||||||| ||||| ||||||||    
T  17470363 cactaaagctcccacatacgcagg-tcaggaacggg-tcccactattttggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttct 17470459  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || |||||||| | ||| | ||||||| |  ||||||||||||||    
T  17470460 aggacttgaacccatgaccattcagtcacgtgacaacaactttac 17470504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 31442409 - 31442517
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttctagaa 205  Q
    ||||||||| |||||  || ||| |||||||| |||||||||||| |||||||| ||  | | ||||||| || ||||||| || || |||||||||  |    
T  31442409 aaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttttacataaaaggctgtttctaaga 31442508  T
Q  206 cttgaactc 214  Q
    |||||||||    
T  31442509 cttgaactc 31442517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 35019371 - 35019316
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||| |||||||| |||||||||| |||| |||||||| || ||||||||    
T  35019371 cactaaagctctcgcatacgcagggtctggg-aggggtcccaccaattggtgtattg 35019316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 47077871 - 47078011
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||  | |||||| |   ||||||||| ||||||||||||| |    
T  47077871 cactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactc---tattttacacaagagactgtttcca 47077967  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||||||||| || ||||||||||||||    
T  47077968 ggacttgaacccgtgacctttcagtcacatgacaacaactttac 47078011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 32758398 - 32758238
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||| ||| ||||||   | |||    
T  32758398 aaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccc---tgttt 32758302  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  32758301 tacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttac 32758238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 10693089 - 10693230
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   ||||| ||||| ||||||| |    
T  10693089 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctt---ttacacaagaggctgtttcca 10693185  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    | |||||||| ||||| ||||||||| || |||||||||||||||    
T  10693186 ggacttgaacccgtgacctttcagtcacatgacaacaactttact 10693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 40464008 - 40463849
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||| ||| |||| ||||||||||||||| |||||| | |||||| ||||||||||| |||||||  ||  ||| ||||||  |  ||||||| ||    
T  40464008 gggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagt--ttttacacaa 40463911  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactggtt 251  Q
    |||||||||||||  |||||||| ||||| ||| ||||| || |||||||||||||| ||||    
T  40463910 gagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttaccggtt 40463849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 2541035 - 2541178
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||| | |||||||| ||||||||||| |||||| | ||  ||| ||||||| || ||||||| ||||| ||||||| |    
T  2541035 cactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgtt-ttttacacaagaggctgtttcca 2541133  T
Q  203 gaacttgaactcgtgatcttt-cagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| |||| ||||| || ||||||||||||||    
T  2541134 ggacttgaacccgtgacctttccagtcacatgacaacaactttac 2541178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 246
Target Start/End: Original strand, 33871914 - 33872067
Alignment:
Q  91 ggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaag 190  Q
    |||||| |||| ||||||||||| |||||||  ||||||||||||||| ||||||||||| |||||||| ||  ||| ||| ||| |  ||||||| |||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgt--ttttacacaag 33872011  T
Q  191 agactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||  |||||| || |||||||| || || ||||||||| || ||||||||||||||    
T  33872012 aggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttac 33872067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 35334832 - 35334972
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||| ||| ||  ||||||| || ||||||  | ||||||||||| |    
T  35334832 cactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgtt-ttttac--acgagactgtttcca 35334928  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||||||||| ||| ||||| || ||||||||||||||    
T  35334929 ggacttgaactcgtgaccttccagtcacatgacaacaactttac 35334972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 42805663 - 42805501
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattt 182  Q
    |||| |||||||  ||| |||||||||||||||||| |  ||||| |||||||| |||||||||| |  |||||||| ||| ||| ||||||| || |||    
T  42805663 aaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtt-ttt 42805565  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  42805564 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 42805501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 21172012 - 21172165
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  21172012 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 21172108  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| ||||| ||||||||  || ||||||||||||||    
T  21172109 gaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttac 21172165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 42477003 - 42476850
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| |||| ||||| |||||||||||| | || | || ||||||| ||||||||||| |||||||| ||  ||| |||||   || ||||||| ||    
T  42477003 gggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttacc---ttgttttacacaa 42476907  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||||||| ||||||||||  ||||| |||| |||| || ||||||||||||||    
T  42476906 gagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaactttac 42476850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 29907550 - 29907394
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacaga 188  Q
    |||||||  ||| |||||||||||||||||||  |||||| |||| ||| |||||||||||| |||||||| ||  ||| |||| ||||| ||||||| |    
T  29907550 gggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactatt-ttttacaca 29907454  T
Q  189 agagactgtttctagaacttgaactcgtgatctttcagtcgcacg--acaacaactttac 246  Q
    |||| |||||||||| |||||||| ||||| ||||||||| || |  |||||||||||||    
T  29907453 agaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttac 29907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 42391096 - 42391251
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | |||    
T  42391096 aaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttt 42391192  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaac 241  Q
    |||| ||||  ||||||| || |||||||| ||||| ||||||||| || |||||||||    
T  42391193 tacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 7879777 - 7879643
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||| | || |||    
T  7879777 aaaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtt-ttt 7879679  T
Q  183 tacagaagagactgtttctagaacttgaactcgtga 218  Q
    |||| |||||| |||||| || |||||||| |||||    
T  7879678 tacacaagagattgtttccaggacttgaacccgtga 7879643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 19426886 - 19427047
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| |||| |||||| |||||| | |||||| | |||||| ||||||||||| |||||||| ||  ||  |||||||||| |||    
T  19426886 aaaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctatt-ttt 19426983  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||| || |||||||| ||||| ||||| ||| || ||||||||||||||    
T  19426984 tacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttac 19427047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 42798788 - 42798646
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | |||||| ||||| || ||||||||||| |||||||| ||  ||| ||||| | || ||||||| ||||||||||||| |    
T  42798788 cactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgtt-ttttacacaagagactgtttcca 42798690  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| ||||| ||| ||||| || ||||||||||||||    
T  42798689 agacttgaacccgtgaccttccagtcacatgacaacaactttac 42798646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 11617582 - 11617746
Alignment:
Q  81 ataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattat 180  Q
    |||||| | |||||||  ||| |||||||| ||| ||||||| ||||||  ||||||| ||||||||||| |||||||| ||  ||  ||||||| || |    
T  11617582 ataaaataagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtt-t 11617680  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||  |||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  11617681 tttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttac 11617746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 23419690 - 23419832
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||| |||||| ||| | ||||| ||||||| ||||||||||| |||||||| ||  ||  ||||||| || ||||||| ||||| ||||||| |    
T  23419690 cactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtt-ttttacacaagaggctgtttcca 23419788  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||||||  |||| |||| |||| || |||| |||||||||    
T  23419789 gaacttgaacctgtgaccttttagtcacatgacagcaactttac 23419832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 246
Target Start/End: Original strand, 34626225 - 34626365
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| | ||| ||||||| ||    
T  34626225 actaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgt--ttttacacaggaggctgtttccag 34626322  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     |||||||   |||  |||||| || || ||||||||||||||    
T  34626323 gacttgaatctgtggcctttcaatcacatgacaacaactttac 34626365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 13805216 - 13805079
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||| ||||||  ||||| | ||||||||||| |||||||| ||| ||| ||||||   | |||||||  |||| || |||| || ||    
T  13805216 aaagctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttaccc--ctgttttacaccagaggctatttccaggac 13805119  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||| | ||||||||| || ||||||||||||||    
T  13805118 ttgaacccgttacctttcagtcacatgacaacaactttac 13805079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 16341394 - 16341276
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttg-tgtattgcacatagctttaccctattattttacagaagagactgtttctagaa 205  Q
    |||||||||||||| |   |||| |||||| |  |||||||||||| ||||||| || |||| ||||||| || ||||||| ||||| ||||||||||||    
T  16341394 aaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgtt-ttttacacaagaggctgtttctagaa 16341296  T
Q  206 cttgaactcgtgatctttca 225  Q
    ||||||| ||||| ||||||    
T  16341295 cttgaacccgtgacctttca 16341276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 28362165 - 28362303
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    ||||||||| |||| | | ||||||||||||| ||||||||||| |||||||| ||  ||| ||| || | | ||||||| ||||| | |||||||| ||    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagcctta-ccaagttttttacacaagaggcagtttctaggac 28362263  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||  |||| ||||||| | || ||||||||||||||    
T  28362264 ttgaacctgtgacctttcagccacatgacaacaactttac 28362303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 43557614 - 43557449
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaa-gctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctatta 179  Q
    |||||| |||||||  ||| ||||||| ||||||||||||| || ||| |||| ||| |||||||||| |  |||||||| ||  ||| |||| || ||     
T  43557614 aaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtt- 43557516  T
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| | ||| ||||||||| || ||||||||||||||    
T  43557515 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttac 43557449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 48735125 - 48735279
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| |||||    | ||||||| ||    
T  48735125 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc---gtgttttacacaa 48735221  T
Q  190 gagactgttt-ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||  ||||| | || |||||||| ||||| ||||||||| || ||||||||||||||    
T  48735222 gaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaactttac 48735279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 224
Target Start/End: Original strand, 18512473 - 18512588
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||| |||||| |||||||| ||||||||||  |||||||| ||  ||| |||||||||  ||||||| ||||   |||||| || ||    
T  18512473 aaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctat--ttttacacaagatgttgtttccaggac 18512570  T
Q  207 ttgaactcgtgatctttc 224  Q
    |||||| ||||| |||||    
T  18512571 ttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 243
Target Start/End: Original strand, 28078151 - 28078286
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaa 205  Q
    |||||||| |||||| | ||| |  |||||||| ||||||||||| ||||||||||   | | ||||||| || |||||||   |||||||||||||| |    
T  28078151 taaagctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttttttacac--gagactgtttctagga 28078248  T
Q  206 cttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    ||||||| ||||| ||| ||||| || |||||||||||    
T  28078249 cttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 27629771 - 27629611
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| |||| ||||| ||||||| | |||| | |||||||| ||||||||||| |||||||  ||  | | ||||||| || |||||    
T  27629771 aaaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgtt-tttta 27629673  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||| ||||||| || |||||||| ||||| ||||| |||  | ||||||||||||||    
T  27629672 cacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttac 27629611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 38262212 - 38262336
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| || ||  |||||||| ||||| ||||| |||||||| |   | | ||||| |||| ||||||| ||||||||||||| |    
T  38262212 cactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatatt-ttttacacaagagactgtttcca 38262310  T
Q  203 gaacttgaactcgtgatctttcagtc 228  Q
    | |||||||| ||||| ||| |||||    
T  38262311 ggacttgaacccgtgaccttccagtc 38262336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 47716593 - 47716438
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| ||| |||||||||||||| |  ||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || |||||||     
T  47716593 gggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacac 47716495  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    ||||| ||||||| || |||||||| ||||| ||| ||||| || | ||||||||||    
T  47716494 aagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 19265932 - 19265792
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||||||| |||| ||||| || |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||  |||||| ||| | |||| || |    
T  19265932 cactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctctt--tttacacaagcggctgtatcca 19265836  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| ||||| ||||||||| |  ||||||||||||||    
T  19265835 agacttgaacccgtgacctttcagtcacgtgacaacaactttac 19265792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 27889336 - 27889388
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||    
T  27889336 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattg 27889388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 39124027 - 39123867
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttacccta---ttatttta 184  Q
    ||||| |||||| ||| ||||||||| |||||| |||||| |||||||| ||||||||||||  |||||||  ||  ||| || |||||   |  |||||    
T  39124027 gggcagcttggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgttttta 39123929  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||||| |||||||| |||||||| ||||   |||||||| || ||||||||||||||    
T  39123928 cacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttac 39123867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 3469191 - 3469337
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccct-attattttacagaagagactgttt 199  Q
    |||||||||||||||||||  ||||||| ||||||| |||| |||||||  |||||||| ||  | |  ||||||  || ||||||| |||||| |||||    
T  3469191 cactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgttt 3469290  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||||    |||| ||||||||| || ||||||||||||||    
T  3469291 ctaggacttgagtctgtgacctttcagtcacatgacaacaactttac 3469337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 246
Target Start/End: Complemental strand, 19266564 - 19266427
Alignment:
Q  108 aagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaact 207  Q
    ||||||||||||||| |||||| |||||||| |||||| |||| |||||||| ||  ||| ||||||| || ||||||  ||| | || |||  || |||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgtt-ttttacgcaagtggctattttcaggact 19266466  T
Q  208 tgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| |  || ||||||||| || ||||||||||||||    
T  19266465 tgaacccacgacctttcagtcacatgacaacaactttac 19266427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 45018926 - 45018983
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccacca 147  Q
    ||||||| |||| |||||||||||||||||||| |||||| |||||||| | ||||||    
T  45018926 gggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccacca 45018983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 5180174 - 5180315
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||| ||||||||||| | ||| ||||| ||| | ||||||  |||| ||| ||| ||  ||||||| || ||| ||| ||||| ||||||| ||    
T  5180174 taaagctcctgcatacgtaggatttggaaaggggtccaatcatttttggtgtgttgtacacagtcttaccctgtt-tttgacacaagaggctgtttccag 5180272  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || |||||| | ||| ||||||||| || ||||||||||||||    
T  5180273 aagttgaacccttgacctttcagtcacatgacaacaactttac 5180315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 6736908 - 6736865
Alignment:
Q  205 acttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||    
T  6736908 acttgaacccgtgacctttcagtcgcatgacaacaactttactg 6736865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 8148985 - 8149104
Alignment:
Q  127 gtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctttcag 226  Q
    |||||||||||| ||||||||||| |||||||| ||  | | |||||||||| ||| ||| |||||   ||||  || ||||||||||||||  || |||    
T  8148985 gtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcag 8149084  T
Q  227 tcgcacgacaacaactttac 246  Q
    || || ||||||||| ||||    
T  8149085 tcacatgacaacaacattac 8149104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 14099030 - 14099164
Alignment:
Q  111 ctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttga 210  Q
    |||| |||||||||||||  |||||||| ||||||||||| |||||||| ||  ||  ||| ||| || ||||||| || || || |||| || |||| |    
T  14099030 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgtt-ttttacacaaaaggctatttccaggacttca 14099128  T
Q  211 actcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || | ||| ||||||||| || ||||||||||||||    
T  14099129 acccatgacctttcagtcacatgacaacaactttac 14099164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 246
Target Start/End: Original strand, 14409047 - 14409181
Alignment:
Q  111 ctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttga 210  Q
    |||| |||||||||||||  |||||||| ||||||||||| |||||||| ||  ||  ||| ||| || ||||||| || || || |||| || |||| |    
T  14409047 ctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgtt-ttttacacaaaaggctatttccaggacttca 14409145  T
Q  211 actcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || | ||| ||||||||| || ||||||||||||||    
T  14409146 acccatgacctttcagtcacatgacaacaactttac 14409181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 22698983 - 22699128
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaag-ggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgttt 199  Q
    ||||| |||||||||||||  |||||| |||||  || ||||||||||||  |||||||| ||  ||  ||||||| || ||||||| |||||||| |||    
T  22698983 cactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtt-ttttacacaagagactattt 22699081  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | || |||||||| | | | ||||||||| || ||||||||||||||    
T  22699082 ccaggacttgaacccataacctttcagtcacatgacaacaactttac 22699128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 36602586 - 36602535
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctggga 134  Q
    |||||| |||||||  ||| |||||||||||||||||||| |||||||||||    
T  36602586 aaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 38604642 - 38604550
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    ||||||||||||||||| |||||| || ||||| || |||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| |||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 42495858 - 42495913
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaaggg 138  Q
    ||||| ||||||||  ||| |||||||||||||||||||| |||||| ||||||||    
T  42495858 aaaaagggggcaacggggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 44123713 - 44123779
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||| ||||||||||| || |||| |||||||||    
T  44123713 ttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttac 44123779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 2662958 - 2663057
Alignment:
Q  109 agctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaactt 208  Q
    |||||||||||| | ||||||||  ||||| ||||||||||| |||||||| ||  ||| ||||||   ||||||||| ||||| ||||||| || ||||    
T  2662958 agctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccc---tattttacacaagaggctgtttccaggactt 2663053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 7193127 - 7193062
Alignment:
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||  |||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 18747606 - 18747481
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||   ||||||| |||||||| || |||||||  ||  ||| |||||||  | ||||||| || || ||||||| |    
T  18747606 cactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttcca 18747507  T
Q  203 gaacttgaactcgtgatctttcagtc 228  Q
      |||||| | ||||| |||||||||    
T  18747506 agacttgatcccgtgacctttcagtc 18747481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 244
Target Start/End: Complemental strand, 11741925 - 11741774
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||  | ||  || |||||||| ||||||||||| |||||||| ||  ||| ||||||||||   |||||  |    
T  11741925 gggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctatt---ttacacta 11741829  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    ||  ||||||  || |||||||| | ||| ||||||||| || ||||||||||||    
T  11741828 gaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 33500634 - 33500586
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||| ||| ||||||||||| |||||| |||||||| ||||||||||||    
T  33500634 cactgaagatcccgcatacgcagggtccgggaaggggtcccaccatttt 33500586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 246
Target Start/End: Complemental strand, 46354293 - 46354171
Alignment:
Q  125 gggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctt 222  Q
    ||||| |||||||| |||||||||| |  |||||||| ||  ||| ||||||| || ||||||| |||||  |||||| || |||||||| ||||| |||    
T  46354293 gggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T
Q  223 tcagtcgcacgacaacaactttac 246  Q
     || || || ||||||||||||||    
T  46354194 ccaatcacatgacaacaactttac 46354171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 48123531 - 48123642
Alignment:
Q  134 aagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacg 233  Q
    ||||| ||||||||||| |||||||| |   || |||||||| |||||| ||| ||||| ||||||| || |||||||| | ||| ||||||| | || |    
T  48123531 aaggggtcccaccatttggtgtattgtatgcagttttaccctgttattt-acacaagaggctgtttccaggacttgaacccatgacctttcagacacatg 48123629  T
Q  234 acaacaactttac 246  Q
    | |||||||||||    
T  48123630 ataacaactttac 48123642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 24449029 - 24448867
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| |||||||||||| ||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| |||||||||| |||    
T  24449029 aaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatt-ttt 24448931  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| || || ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  24448930 tacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 24448867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 43334341 - 43334179
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattt 182  Q
    |||| |||||||  ||| ||||||||||||||||| || |||||| |||||||| ||||||||||||  |||||||| ||  ||| ||||||| || |||    
T  43334341 aaaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 43334243  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| | ||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  43334242 tacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 43334179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 38879715 - 38879558
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || ||||| |     
T  38879715 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttatac 38879617  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  38879616 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 38879558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 27328870 - 27328729
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||||||||||| |||||  |||||||| |||||||||| |  |||||||| ||  ||| ||||||| || ||||||| ||||||||||||| ||    
T  27328870 taaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacacaagagactgtttccag 27328772  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     ||||||||  |||| ||||||||| || ||||||||||||||    
T  27328771 gacttgaacctgtgacctttcagtcacatgacaacaactttac 27328729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 41014450 - 41014296
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||||||||| |  |||||  ||||||| ||||||||||| |||||||| ||  ||| ||||||| ||  |||||| ||    
T  41014450 gggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt--tttacacaa 41014353  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  41014352 gaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 41014296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 35710449 - 35710290
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| ||||| |||||||||||| | | | || |||||||| ||||||||||| |||||||| ||  ||| ||||||||||   ||    
T  35710449 aaaaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctatt---tt 35710353  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||| ||||||| || |||||||| ||||| ||||||||  || ||||||||||||||    
T  35710352 acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttac 35710290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 32703554 - 32703419
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  32703554 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 32703458  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    ||| ||||||| || |||||||| ||||| |||||||||    
T  32703457 gaggctgtttccaggacttgaacccgtgacctttcagtc 32703419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 8169982 - 8170140
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| |||| || |||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | |||||    
T  8169982 aaaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgtttta 8170078  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || || || ||||||| || |||||||| ||||| ||||| ||| || ||||||||||||||    
T  8170079 cacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttac 8170140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 16957446 - 16957371
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacata 165  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |||||    
T  16957446 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacata 16957371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 12006331 - 12006485
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||| | ||||||||||||||| |||||||||  || |||||||| |   ||| |||||||||| |||||||     
T  12006331 gggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctatt-ttttacat 12006429  T
Q  188 aagagactgtttctagaacttgaa-ctcgtgatctttcagtcgcacgacaacaactt 243  Q
    |||||  |||||| || ||||||| | ||||| ||||||||| || |||||||||||    
T  12006430 aagaggttgtttccag-acttgaaccccgtgacctttcagtcacatgacaacaactt 12006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 43574723 - 43574611
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctaga 204  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||| || ||||| ||  ||| ||||||| || || |||| |||||| |||||| ||     
T  43574723 ctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgtt-ttctacacaagagattgtttccagg 43574625  T
Q  205 acttgaactcgtga 218  Q
    |||||||| |||||    
T  43574624 acttgaacacgtga 43574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 39801635 - 39801591
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccacca 147  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  39801635 cactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 251
Target Start/End: Complemental strand, 2838890 - 2838750
Alignment:
Q  110 gctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttg 209  Q
    ||||||||||||| |||||| | |||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||  ||||||||   |||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagatgctgtttctgagacttg 2838793  T
Q  210 aactcgtgatcttt-cagtcgcacgacaacaactttactggtt 251  Q
    | ||||||| |||| ||||| || |||||||||||||| ||||    
T  2838792 acctcgtgacctttacagtcacatgacaacaactttaccggtt 2838750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 4619107 - 4619264
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| ||||||||||| |||||| |  ||||| |||||||| |||||||||| |  |||||||| ||  ||| ||||||| || |||||||     
T  4619107 gggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacac 4619205  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| || |||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  4619206 aagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 4619264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 22600569 - 22600431
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||||| ||| || |||||||| ||||||||||| |||||||| ||| ||| |||||||  | ||||||| || | | |||||| || ||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccct-gtgttttacacaaaatattgtttccaggac 22600471  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||| | ||| ||||| || || |||||||||||    
T  22600470 ttgaacccgtaaccttccagtcacatgataacaactttac 22600431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 28516436 - 28516592
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg-tgtattgcacatagctttaccctattattttacaga 188  Q
    ||||||| |||| |||||||||||| |||| || |||||||||||| || ||||||||||||| ||||||| ||  |||  || ||| || ||||||| |    
T  28516436 gggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgtt-ttttacaca 28516534  T
Q  189 agagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||  |||||| |  |||||||| ||||| ||||||| | |  ||||||||||||||    
T  28516535 agaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttac 28516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 10306493 - 10306539
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  10306493 taaagctcccgcatacgcagggtccgggaaggggtcccaccattttg 10306539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 25622579 - 25622533
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  25622579 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 37024646 - 37024712
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 37024712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 7097771 - 7097832
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||| |||||||||||||||||||| |||||  |||||||| || |||||||| ||||||||    
T  7097771 tggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattg 7097832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 21784335 - 21784396
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||| ||| ||||||| |||||||||||| |||||| || ||||| ||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 22861758 - 22861823
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    ||||||| ||||||||| |||||| |||||||  ||||| ||||||||| || |||||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 30006444 - 30006372
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccct 175  Q
    ||||||||||||||||||| ||||  | |||||||| ||||||||||| ||||| || ||| ||| |||||||    
T  30006444 cactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccct 30006372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 198
Target Start/End: Original strand, 16880663 - 16880757
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtt 198  Q
    |||||||||||||||||||| | |||| |||||| | || |||||||| |||||||| ||  ||| ||||||| || ||||||| ||||| |||||    
T  16880663 cactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 5873338 - 5873433
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| || ||| ||| |||  |||||||| || ||||| || || |||| |||||||||  ||||||| ||||| |||||||    
T  5873338 cactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccctat--ttttacacaagaggctgtttc 5873433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 19142959 - 19143066
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||| |||||||||||| | |||| |||||||| ||||||||||| ||||| || ||  ||| ||||||| |  ||||||| |||||  |||||| |    
T  19142959 cactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgt--ttttacacaagaggttgtttcca 19143056  T
Q  203 gaacttgaac 212  Q
    | ||||||||    
T  19143057 ggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 208943 - 209085
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg-tgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    |||||||||||  ||||||  ||||||  ||||||| ||||||||||||| ||||||| |   ||| ||||||| ||  |||||| |||||  |||| |     
T  208943 cactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtt--tttacacaagaggttgttgcc 209040  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||||||| |||| |||| |||| || ||||||||||||||    
T  209041 aggacttgaacttgtgaccttttagtcacatgacaacaactttac 209085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 34154817 - 34154886
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||  ||| ||||| |||| ||||||| | |||||| |||||||| ||||||||||| ||||||||    
T  34154817 gggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattg 34154886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 4654424 - 4654480
Alignment:
Q  96 cttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    |||||| |||||||||||||||||| | |||||  | |||||| |||||||||||||    
T  4654424 cttggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccattttg 4654480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 13774984 - 13774928
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||||||||||||||| |||||| || ||||| |||  |||||| ||||||||    
T  13774984 cactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattg 13774928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 29521701 - 29521842
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||| ||  ||| ||||||| || ||||| | ||||| ||||||| |    
T  29521701 cactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgtt-ttttaaacaagaggctgtttcca 29521799  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    | |||||||| ||||| ||| ||||| ||||||||||||||||    
T  29521800 ggacttgaacccgtgaccttccagtcacacgacaacaacttta 29521842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 36720938 - 36720773
Alignment:
Q  80 aataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctatta 179  Q
    ||||| ||| |||||||  ||| |||||||||| ||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||     
T  36720938 aataataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt- 36720840  T
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  36720839 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 36720773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 13160820 - 13160679
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| |||||||||    
T  13160820 cactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttcta 13160723  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||| ||||| || ||||||||||||||    
T  13160722 ggacttgaacccgtgaccttacagtcacatgacaacaactttac 13160679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 28817642 - 28817784
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||  |||||||| ||  ||| ||||||| || ||||||| ||||| ||||||| |    
T  28817642 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttcca 28817740  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||| ||||| || ||||||||||||||    
T  28817741 ggacttgaacccgtgaccttccagtcacatgacaacaactttac 28817784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 246
Target Start/End: Complemental strand, 35261817 - 35261656
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| |||||||||||||||||||| ||||||  ||||||| ||||||||||| |||||||| ||  | | ||||||| || ||||    
T  35261817 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtt-tttt 35261719  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||||||||| ||  ||||||| ||||| ||| ||||| || ||||||||||||||    
T  35261718 acacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaactttac 35261656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 12670266 - 12670406
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   ||||| ||||| ||||||| |    
T  12670266 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt---ttacacaagaggctgtttcca 12670362  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||||||||| || ||||||||||||||    
T  12670363 ggacttgaacccgtgacctttcagtcacatgacaacaactttac 12670406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 45071396 - 45071242
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||| ||||||||||||||| | |||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||    
T  45071396 gggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaa 45071299  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| ||||||||||| ||||| ||| || || || ||||||||||||||    
T  45071298 gaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaactttac 45071242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 30454094 - 30454253
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||| | ||  ||| |||||   || ||||    
T  30454094 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttacc---ttgtttt 30454190  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  30454191 acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 30454253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 8897760 - 8897922
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| || ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||| || |||| |||||||||| |||    
T  8897760 aaaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctatt-ttt 8897858  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||| |  |||||| || |||| ||| ||||| ||| | ||| || ||||||||||||||    
T  8897859 tacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttac 8897922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 39460997 - 39461154
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| || ||||||| |  |||||||| ||  ||| |||| || || |||||||     
T  39460997 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgtt-ttttacac 39461095  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  39461096 aagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttac 39461154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 44781520 - 44781664
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| ||||||||||| ||| ||||| ||||||  |||||||| ||| ||| |||||||  | ||||||| |||||  ||||||    
T  44781520 cactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccct-gtcttttacacaagaggttgtttc 44781618  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| ||||| ||||||||| |  ||||||||||||||    
T  44781619 caggacttgaacccgtgaactttcagtcacgtgacaacaactttac 44781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 2626646 - 2626496
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccc--tattattttacagaagagact 195  Q
    |||| |||| ||||||||||||| | ||||||||||||||| ||||| ||||| |||||||| ||  ||  ||||||  | || ||||||| ||||| ||    
T  2626646 tggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggct 2626547  T
Q  196 gtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| || |||||||| ||||| ||||| ||| || ||||||||||||||    
T  2626546 gtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttac 2626496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 20284085 - 20284231
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccc-tattattttacagaagagactgttt 199  Q
    ||||||| |||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| |||||| | || ||||| | ||||| ||||||    
T  20284085 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaagaggctgttt 20284184  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | || |||||||| ||||| ||||||||| || ||||||||||||||    
T  20284185 ccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 20284231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 24365079 - 24365218
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    ||||||||| |||||| |||||| |||||||| ||||||||||| ||||||||  |  ||| |||||||  | ||||||| ||||| ||||||||||  |    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggc 24365178  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||  ||| |||| || ||||||||||||||    
T  24365179 ttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 246
Target Start/End: Original strand, 44742511 - 44742677
Alignment:
Q  80 aataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctatt 178  Q
    |||| |||||||||| |  ||| |||||| |||||||||| |||||||||   |||||| |||||||||||| |||||||| ||  ||| ||||||| ||    
T  44742511 aatataaaaggggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgtt 44742610  T
Q  179 attttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     ||||||| | |||| |||||| ||||||||||||| ||| ||| || || | |||||||||||||||    
T  44742611 -ttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaacaactttac 44742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 5135309 - 5135418
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||| |||||||| ||| ||| ||||||| || ||||||| ||||| ||||||| || ||    
T  5135309 aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctctt-ttttacacaagaggctgtttccaggac 5135407  T
Q  207 ttgaactcgtg 217  Q
    |||||| ||||    
T  5135408 ttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 21070713 - 21070860
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattatttt--acagaagagactgtt 198  Q
    ||||||| |||||||||||| |||||| |||||||| |||||||||| |  |||||||| ||  ||| ||||||| || ||||  | | ||||| |||||    
T  21070713 cactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtt 21070812  T
Q  199 tctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || || |||||||| ||||| ||||||||| || ||||||||||||||    
T  21070813 tccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 21070860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 12626022 - 12625866
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||| ||| ||||||||||| |||||||| |   ||  ||||||| || ||||||| ||    
T  12626022 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaa 12625923  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||  |||||| || |||||| | ||||| ||   |||| |||||||||||||||||    
T  12625922 gaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactttac 12625866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 44530268 - 44530126
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| ||||||  ||||||| ||||||||||| |||||||| ||  ||| ||||||| || ||||||| |||||  |||||| |    
T  44530268 cactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-ttttacacaagaggttgtttcca 44530170  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| ||||| |||  |||| || |||| |||||||||    
T  44530169 agacttgaacccgtgaccttctagtcacatgacagcaactttac 44530126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 26954254 - 26954109
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||| |   ||||||||||||| |||||||||| |  |||||||| ||  ||| ||||||| || ||||||| ||||| |||||||    
T  26954254 cactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttc 26954155  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| ||||| |||  | || || ||||||||||||||    
T  26954154 caggacttgaacccgtgaccttctaatcacatgacaacaactttac 26954109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 6760964 - 6760799
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctatta 179  Q
    ||||||| |||||||  ||| |||||||||||||||||| |  ||||| | |||||| |||||||||  || |||||||| ||  ||| ||||||| ||     
T  6760964 taaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtt- 6760866  T
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| |||  ||||  | ||||||||||||||    
T  6760865 ttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttac 6760799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 20869523 - 20869654
Alignment:
Q  110 gctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttg 209  Q
    ||||||||||| | |||||| |||||||| || ||||  || |||||||| ||| ||| ||||||| ||   ||||| ||||| ||||||| || |||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgtt---ttacacaagaggctgtttccaggacttg 20869617  T
Q  210 aactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||| ||||||||| || ||||||||||||||    
T  20869618 aacccgtgacctttcagtcacatgacaacaactttac 20869654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 29877218 - 29877117
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| |||||| ||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| || ||||||| || || ||||    
T  29877218 tggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-ttttacacaaaaggctgt 29877120  T
Q  198 ttc 200  Q
    |||    
T  29877119 ttc 29877117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 18164776 - 18164914
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| |||||  | || || | ||| |||||||| ||  | | ||||||| ||  |||||| ||||| ||||||| |    
T  18164776 cactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtt--tttacacaagaggctgtttcca 18164873  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    | |||||||| ||||| ||||||||| || |||||||||||    
T  18164874 ggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 26102657 - 26102580
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| ||||||||    
T  26102657 taaaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattg 26102580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 227
Target Start/End: Complemental strand, 36918240 - 36918120
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaa 205  Q
    |||||||| ||||||| |||||| ||||||||  ||| || |||| |||||||| ||| ||| ||||||| || ||||||| |||| | |||||| ||||    
T  36918240 taaagctctcgcatacatagggtttgggaaggaatcctactatttggtgtattgtacacagccttaccctgtt-ttttacataagaaattgtttccagaa 36918142  T
Q  206 cttgaactcgtgatctttcagt 227  Q
    |||||||  |||| ||||||||    
T  36918141 cttgaacatgtgacctttcagt 36918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 22598280 - 22598134
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| |||||||| ||||||||||| | |||| ||||| || || ||||| || |||||||| ||||||| ||||||| || ||||||| |||||  |||    
T  22598280 tggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgtt-ttttacacaagaggttgt 22598183  T
Q  198 ttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| || | |||||| ||||| |||||||||    ||||||||||||||    
T  22598182 ttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttac 22598134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 28407519 - 28407475
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  28407519 taaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 8483956 - 8484062
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctaga 204  Q
    |||||||||||||||||| ||||||||||| ||| |||||||| || |||||||| ||  ||| || |||| || ||||||| |||||  |||||| ||     
T  8483956 ctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgtt-ttttacacaagaggttgtttccagg 8484054  T
Q  205 acttgaac 212  Q
    ||||||||    
T  8484055 acttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 19729459 - 19729365
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    ||||| |||||||| ||| | |||||| |||||||| ||||||||||| |||||||| ||| ||| ||||||   | ||||||| |||||||||||||    
T  19729459 cactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccc---tgttttacataagagactgtttc 19729365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 7136543 - 7136687
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||| |  ||||| |||||||| |||||||||  || |||||||| ||  ||| |||||||  | ||||||| |||||  ||||||    
T  7136543 cactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggt-ttttacacaagaggttgtttc 7136641  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| | ||| ||| ||||| || ||||||||||||||    
T  7136642 caggacttgaacccatgaccttccagtcacatgacaacaactttac 7136687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 16013575 - 16013527
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||||||||||||| | ||||||||||||||| || |||||||||    
T  16013575 cactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttt 16013527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 17823708 - 17823553
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||| ||||| | |||||  |||||||| | ||||||||| |||||||  ||  ||  ||| |||  | ||||||| ||    
T  17823708 gggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggt-ttttacacaa 17823610  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || |||||||| ||||| ||||| ||| || ||||||||||||||    
T  17823609 gaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttac 17823553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 20870064 - 20869946
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattat 180  Q
    |||||| |||||||  ||| |||||||||||||||||| |  |||||  ||||||| |||||||||  || |||||||| ||  ||| ||||||| || |    
T  20870064 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-t 20869966  T
Q  181 tttacagaagagactgtttc 200  Q
    |||||| |||||||||||||    
T  20869965 tttacacaagagactgtttc 20869946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 25250661 - 25250499
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattt 182  Q
    |||| |||||||  ||| ||||||| |||||||||| |  ||||  |||||||| |||||||||| |  |||||||| ||  |||  ||||||||| |||    
T  25250661 aaaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatt-ttt 25250563  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| || || ||||||| || ||||||||  |||| ||| ||||| || ||||||||||||||    
T  25250562 tacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttac 25250499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 241
Target Start/End: Complemental strand, 31457291 - 31457155
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||| |||||||||||||| ||||| ||||||||| ||| |||||||  ||||||| ||  ||| ||  |||||  ||||||| |||||  |||||  |    
T  31457291 cactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcctat--ttttacacaagaggttgtttaca 31457194  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaac 241  Q
    | |||||||| ||||| ||||||| | || |||||||||    
T  31457193 ggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 389764 - 389642
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt-acagaagagactgtttct 201  Q
    ||||||||||| |||||||| |||||| || ||||| ||||| ||||| |||||||| ||  | | ||||||| || |||| ||| |||||  ||||||     
T  389764 cactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttcc 389665  T
Q  202 agaacttgaactcgtgatctttc 224  Q
    || |||||||| ||||| |||||    
T  389664 aggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 28407459 - 28407393
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  28407459 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 28407393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 246
Target Start/End: Complemental strand, 24245565 - 24245428
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccatttt---gtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||||||||||| ||||||  ||||||| |||||| |||||   ||| |||| || |||  ||||||| |||     || ||||||| ||||| |    
T  24245565 taaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctgtta-----cataagagac-gtttcca 24245472  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||||||||| || ||||||||||||||    
T  24245471 ggacttgaacccgtgacctttcagtcacatgacaacaactttac 24245428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 30962857 - 30962929
Alignment:
Q  171 accctattattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    |||||||| ||||||| ||||| ||||||| || ||||||| |||||| |||||| || || ||||||||||||    
T  30962857 accctatt-ttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 40604909 - 40604977
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||| | ||| |||||||||||||||||||||||||| | ||||||| | ||| ||||| ||||||||    
T  40604909 gggcaattcggtgcactaaagctcccgcatacgtagggtttcggaagggat-ccatcatttagtgtattg 40604977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 27468089 - 27468141
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaag 136  Q
    ||||| |||||||  ||| |||||||||||||||||||| |||||| ||||||    
T  27468089 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 27508029 - 27507985
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccacca 147  Q
    |||||||||||||||||||| |||||  |||||||| ||||||||    
T  27508029 cactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 46972 - 46808
Alignment:
Q  81 ataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattat 180  Q
    |||||||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  | | |||||||||| |    
T  46972 ataaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatt-t 46874  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||  |||||| || |||||||| ||||| |||  |||| || ||||||||||||||    
T  46873 tttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttac 46808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 24788 - 24925
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||  |||||||| ||||||||||| |||| ||| ||  ||| ||||||| || ||||||| ||||| |||||        
T  24788 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtt-ttttacacaagaggctgtt---- 24882  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| | ||| ||||||||| || ||||||||||||||    
T  24883 -gacttgaacccatgacctttcagtcacatgacaacaactttac 24925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 46726 - 46772
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  46726 taaagctcccgcatacgcagggtctgggaaggggtcccaccattttg 46772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 25629186 - 25629072
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| |||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||| ||| ||| |||||||||| |||||    
T  25629186 aaaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctatt-tttta 25629088  T
Q  185 cagaagagactgtttc 200  Q
    || |||||||||||||    
T  25629087 cacaagagactgtttc 25629072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 5648377 - 5648236
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||| ||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||||||| |    
T  5648377 cactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttcca 5648280  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| ||| ||||| || ||||||||||||||    
T  5648279 ggacttgaacccgtgaccttacagtcacatgacaacaactttac 5648236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 6430644 - 6430783
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctaga 204  Q
    |||||||||||||||||| |||||| |||||| | ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||||||| |      
T  6430644 ctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttccatg 6430741  T
Q  205 acttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||| ||||| ||||||||| || ||||||||||||||    
T  6430742 acttgaacccgtgacctttcagtcacatgacaacaactttac 6430783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 14983966 - 14983811
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| |   | | |||||||||| ||||||| ||    
T  14983966 gggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctatt-ttttacacaa 14983868  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| |  |||||||  ||||| ||| || ||  | ||||||||||||||    
T  14983867 gaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttac 14983811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 17043391 - 17043549
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||||||||| | |||| || ||||||||| ||||| | ||||||||||||||| ||||||||||| |||||||| ||  ||| |||||||  |||||    
T  17043391 aaaaaaggggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-gtattt 17043488  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    |||| ||||| ||||||| || ||||||||  |||| ||||||||| |  |||||||||||    
T  17043489 tacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 30639498 - 30639357
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||| | |||||| |||||||| || |||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||||||| |    
T  30639498 cactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt--ttttacacaagagtctgtttcca 30639401  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | ||||||||  |||| ||||||||| || ||||||||||||||    
T  30639400 ggacttgaaccagtgacctttcagtcacaagacaacaactttac 30639357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 40915947 - 40915806
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||  ||| ||||| | |  ||||||| ||||| ||||||| |    
T  40915947 cactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgt--ttttacacaagaggctgtttcca 40915850  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| ||||| |||  |||| || ||||||||||||||    
T  40915849 ggacttgaacccgtgaccttatagtcacatgacaacaactttac 40915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 246
Target Start/End: Complemental strand, 21647100 - 21646941
Alignment:
Q  88 aggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttac 185  Q
    |||||||||  ||| |||||||||||||||||| |  |||||||||||||| |||||||||  || || ||||| ||  ||| |||||||||| ||||||    
T  21647100 aggggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctatt-ttttac 21647002  T
Q  186 agaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | ||||| ||||||| || ||||||||  |||| ||| ||||| || ||||||||||||||    
T  21647001 acaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttac 21646941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 16911696 - 16911539
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  |||| |||||||||||||| |||| |||||| |||||||| |||||||||| |  |||||||| ||  ||| |||||||  | || ||||     
T  16911696 gggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgat-ttgtacac 16911598  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||| |||||||||| |||||||| ||||| |||| |||| || ||||||||||||||    
T  16911597 aagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttac 16911539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 20639653 - 20639771
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattat 180  Q
    ||||||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||||||||||| |||||||| ||  ||| ||||||| || |    
T  20639653 taaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtt-t 20639751  T
Q  181 tttacagaagagactgtttc 200  Q
    |||||| ||||| |||||||    
T  20639752 tttacacaagaggctgtttc 20639771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 44363133 - 44363290
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||||  |||  ||| ||  |||  |||||| || |||||||     
T  44363133 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgtt-ttttacac 44363231  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | ||| ||||||  || |||||||||||||| ||||||||| || ||||||||||||||    
T  44363232 acgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttac 44363290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 246
Target Start/End: Original strand, 48598823 - 48598981
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| ||||| |||||| ||||| | | |||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   |||    
T  48598823 aaaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt---tta 48598919  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  48598920 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 48598981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 240
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  110 gctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttg 209  Q
    ||||||||||||  |||||| ||||| || ||||||||||| |||||||||||| | | |||||||||| ||||||| | ||| ||||||| ||  ||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattgcacacaaccttaccctatt-ttttacacatgaggctgtttccagggcttg 7385597  T
Q  210 aactcgtgatctttcagtcgcacgacaacaa 240  Q
    ||| ||||| ||||||||| || ||||||||    
T  7385598 aacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 20225114 - 20224961
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  20225114 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 20225018  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||  |||||| || |||||||| | ||| ||||||||| || ||||||||||||||    
T  20225017 gaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttac 20224961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 54730371 - 54730226
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| |||||| |||||||| | ||| |||| |  |||||||  ||  ||| ||| |||||| ||||||| ||||| |||||||    
T  54730371 cactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatcctatttttttacacaagaggctgtttc 54730272  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| |||||||| ||||| ||||  ||| || ||||||||||||||    
T  54730271 taggacttgaacccgtgaccttttggtcacatgacaacaactttac 54730226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 11054144 - 11054304
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| | || |||||| |||||||| ||  ||  ||||||| ||   |    
T  11054144 aaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgtt---t 11054240  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||||||||||  || |||||||| ||||| ||||||||| || ||||||||||||||    
T  11054241 tacacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttac 11054304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 47528526 - 47528686
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||| ||||||| ||||   |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   |    
T  47528526 aaaaaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt---t 47528622  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  47528623 tacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttac 47528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 35567289 - 35567147
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||| ||| |||||  |||||||| ||||||||||| |||| ||| ||| ||| ||||||| || ||||||| ||| | ||||||| |    
T  35567289 cactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtt-ttttacacaagtggctgtttcca 35567191  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| | ||| ||||||||  || ||||||||||||||    
T  35567190 agacttgaacccatgacctttcagttacatgacaacaactttac 35567147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 47441550 - 47441688
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||| || |||  |||||| |||||||| ||| ||||||| |||||||| ||| ||| |||||||  | ||||||| |||||||||||||| | ||    
T  47441550 aaagctcctgcttactcagggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgat-ttttacaaaagagactgtttcttggac 47441648  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||  |||| ||||||||| |  ||||||||||||||    
T  47441649 ttgaacctgtgacctttcagtcacgtgacaacaactttac 47441688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 16408597 - 16408761
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattat 180  Q
    |||||| |||||||  ||| |||||||||||||||||| |  ||||| |||||||| | |||||||| |  |||||||| ||  ||  ||||||| || |    
T  16408597 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtt-t 16408695  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  16408696 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 16408761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 41018810 - 41018933
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||| ||  |||||| | ||||||||||||| |||||| |||| |||||||| || |||| ||||||||  |||||||| |||||  |||||| |    
T  41018810 cactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttacccta--attttacacaagaggttgtttcca 41018907  T
Q  203 gaacttgaactcgtgatctttcagtc 228  Q
    | |||||||| ||||| |||||||||    
T  41018908 ggacttgaacccgtgacctttcagtc 41018933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 19027967 - 19027829
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||||||| |||||| || |||||| ||||| |||||||| || |||||||| ||  ||| ||||||| || ||||||| ||||   |||||| |    
T  19027967 cactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgtt-ttttacacaagatgttgtttcca 19027869  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaact 242  Q
    | |||||||| ||||| ||||||||| |  ||||||||||    
T  19027868 ggacttgaacccgtgacctttcagtcacgtgacaacaact 19027829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 39029078 - 39029219
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    |||||||||||||||| | |||||| || ||| | |||||||||||| |||||||| ||| ||| ||||||| || ||||||| ||||| ||||||| |     
T  39029078 ctaaagctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtt-ttttacacaagaggctgtttccaa 39029176  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||   ||| |||| |||| |||||||||||||||||    
T  39029177 ggcttgaacctatgaccttttagtcacacgacaacaactttac 39029219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 47444076 - 47443951
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||| ||||||| ||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| || ||||||  ||||| ||||||| |    
T  47444076 cactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-ttttacgcaagaggctgtttcca 47443978  T
Q  203 gaacttgaactcgtgatctttcagtcg 229  Q
    | |||||||| ||||| ||||| ||||    
T  47443977 ggacttgaacccgtgacctttcggtcg 47443951  T

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Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 29207901 - 29208041
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  29207901 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 29207997  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacg 233  Q
    ||| |  |||| || |||||||| ||||| ||||||||| ||||    
T  29207998 gaggcaatttccaggacttgaacccgtgacctttcagtcacacg 29208041  T

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Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 30352575 - 30352644
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    ||||||| |||||||  ||| |||||||||||||||||||| |||||| | |||||| ||||||||||||    
T  30352575 taaaaaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttt 30352644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 30690187 - 30690248
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||| |||||||||||||||||||| |||||| |||||||| |||||||| || ||||||||    
T  30690187 tggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattg 30690248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 33836480 - 33836549
Alignment:
Q  80 aataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    ||||||||| |||||||  | | |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  33836480 aataaaaaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 38786750 - 38786673
Alignment:
Q  81 ataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtatt 158  Q
    |||||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||    
T  38786750 ataaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 23501928 - 23501770
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattat 180  Q
    |||||| |||||||  ||| |||||||||||||||||| | |||||| |||||||| |||||||||  || |||||||| ||  | | ||||||| || |    
T  23501928 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtt-t 23501830  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||||| ||||       |||||||| ||||| ||||||||| || ||||||||||||||    
T  23501829 tttacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttac 23501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 38755911 - 38755970
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||    
T  38755911 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 44718684 - 44718641
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccat 148  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  44718684 ctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 49938611 - 49938746
Alignment:
Q  105 ctaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    |||||||||||||||| | ||||| ||||||||| |||||||||||| |||||||| |||   | ||||||  |  ||||||| ||||| ||||||| ||    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtaca---ccttaccccgt--ttttacacaagaggctgtttccag 49938705  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
     ||||||||  |||| ||||||||| |  ||||||||||||    
T  49938706 gacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 54967135 - 54966998
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||| |||||||  |||||||| ||||||||||| || ||||| |   | | ||||||| || ||||||| |||||  | |||| |||||    
T  54967135 aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgtt-ttttacacaagaggttctttccagaac 54967038  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||  |||| ||||||||| || ||||||||||||||    
T  54967037 ttgaacatgtgacctttcagtcacatgacaacaactttac 54966998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 14590920 - 14590814
Alignment:
Q  140 tcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaaca 239  Q
    |||||||||||  ||||||| |   ||| ||||||| || ||||| | ||||| |||||||||| |||||||  ||||| ||||||||| || |||||||    
T  14590920 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 14590821  T
Q  240 actttac 246  Q
    |||||||    
T  14590820 actttac 14590814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 25343328 - 25343164
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattat 180  Q
    |||||||||||| |  ||| | ||||||||| | |||||| ||| ||| ||||||| ||| ||| ||||  |||||||| ||  ||| ||||||| || |    
T  25343328 aaaaaaggggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagccttaccctgtt-t 25343230  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||||||| |||| |||||||||||  |||| || |||||| |  ||||||||||||||    
T  25343229 tttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttac 25343164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 9832311 - 9832451
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| ||||| || ||| ||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | |||||    
T  9832311 aaaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgtttta 9832407  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    || ||||| ||||||  || |||||||| ||||| |||||||||    
T  9832408 cacaagaggctgttttcaggacttgaacccgtgacctttcagtc 9832451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 20908652 - 20908701
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||    
T  20908652 cactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttg 20908701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 23580300 - 23580365
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttta 245  Q
    ||||||| ||||| || |||||||||||||||| ||||| ||||||||| |  |||||||||||||    
T  23580300 ttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 32484372 - 32484307
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat 148  Q
    |||||| |||||||  ||| |||||||||||||||||| | |||||| |||||||| |||||||||    
T  32484372 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 51865057 - 51865110
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||||||||| |||||| ||||||||  |||||||||| ||||||||    
T  51865057 taaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattg 51865110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 11394984 - 11394924
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    |||||||  ||| |||||||||||||||||||| |||||| || ||||| |||||||||||    
T  11394984 gggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 11404711 - 11404651
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    |||||||  ||| |||||||||||||||||||| |||||| || ||||| |||||||||||    
T  11404711 gggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 16494342 - 16494290
Alignment:
Q  99 ggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||||||||| ||||||||  |||||||||||| || ||||||||||||    
T  16494342 ggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttt 16494290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 47482870 - 47482914
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  47482870 aaagctcccgcatacgcagggtccgggaaggggtcccaccatttt 47482914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 54175184 - 54175043
Alignment:
Q  103 cactaaagctcccgcatacgtagggt-ctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactg-ttt 199  Q
    |||||||||||||||||| | ||||| | |||||||| |||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||| |||    
T  54175184 cactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttt 54175087  T
Q  200 ctagaacttgaactcgtgatctttcagtcgcacgacaacaactt 243  Q
    | || |||||||  |||||  |||||||| || |||||||||||    
T  54175086 ccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 7909296 - 7909392
Alignment:
Q  103 cactaaagctccc-gcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    ||||||||||||| ||||||| |||||  |||||||| ||||||||||| |||||||| ||  | | ||||||| |  ||||||| |||||||||||||    
T  7909296 cactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgt--ttttacacaagagactgtttc 7909392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 158
Target Start/End: Original strand, 32478811 - 32478862
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtatt 158  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||| |||||||    
T  32478811 aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt 32478862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 49796911 - 49796860
Alignment:
Q  108 aagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||||||| |||||  |||||||| ||||||||||| ||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattg 49796860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 8820627 - 8820581
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    ||||||| ||| |||||||| ||||||||||||||| ||||||||||    
T  8820627 cactaaaactctcgcatacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 25463237 - 25463108
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||| | |||||| |||||||| ||||||||||| |||| ||| ||  | | || ||| | | ||||||| |||||  |||||| || ||    
T  25463237 aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttccc-agttttttacacaagaggttgtttccaggac 25463139  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaa 237  Q
    |||||| ||||| ||||||||| || |||||    
T  25463138 ttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 30581481 - 30581571
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagag 192  Q
    ||||||||||||  |||| | |||||| |||||||| |||||||||||| |||||||| ||| | | ||||||| || ||||||| |||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagag 30581571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 35532131 - 35532077
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagg 137  Q
    |||||| |||||||  ||| |||||||||||||||||||| |||||| |||||||    
T  35532131 aaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 40553940 - 40553998
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat 148  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| || ||||||    
T  40553940 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 21489203 - 21489158
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||    
T  21489203 aaagctcccgcatacgcagggttcgggaaggggtcccaccattttg 21489158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 36816380 - 36816449
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    |||||| |||||||  |||||||||||||||||||||||  ||||||  ||||||  ||||||| |||||    
T  36816380 aaaaaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttg 36816449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 246
Target Start/End: Original strand, 40272809 - 40272970
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttt 183  Q
    ||||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| || ||||    
T  40272809 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt-tttt 40272907  T
Q  184 acagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| |||||  |||||| || |||||||| | ||| ||| ||||| || ||||||||||||||    
T  40272908 acacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttac 40272970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 13730597 - 13730762
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctatta 179  Q
    ||||||| |||||||  ||| |||||||||||||||||| |  ||||| |||||||| |||||||||  || |||||||| ||| ||| ||||||| ||     
T  13730597 taaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtt- 13730695  T
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| ||| ||||| || ||||||||||||||    
T  13730696 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttac 13730762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 13628793 - 13628948
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || | |||||     
T  13628793 gggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-tcttacac 13628891  T
Q  188 aagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||    
T  13628892 aagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 46421054 - 46421195
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || ||||||| ||||| ||||||| ||    
T  46421054 taaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttccag 46421152  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     |||||||| ||||| |||| |||| || ||||||||||||||    
T  46421153 gacttgaacccgtgacctttaagtcacatgacaacaactttac 46421195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 103 - 248
Target Start/End: Original strand, 34420659 - 34420804
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttg-tgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||||| |||||| | |||| |||||||| ||||||||||||| ||||| | ||  ||| ||||||| || ||||||| ||||| |||||||     
T  34420659 cactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtt-ttttacacaagaggctgtttcc 34420757  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    || |||||||| ||||| ||||||||| |  ||||||||||||||||    
T  34420758 aggacttgaacccgtgacctttcagtcacgtgacaacaactttactg 34420804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 26573273 - 26573126
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgt 197  Q
    |||| ||||||||||| |||||||| |||||| |||| ||| |||||||| || |||||||| ||  ||| ||||||| || ||||||| | ||| ||||    
T  26573273 tggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtt-ttttacacaggaggctgt 26573175  T
Q  198 ttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| || |||||||| ||||| ||||||||| |  ||||||||||||||    
T  26573174 ttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 26573126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 26869867 - 26869706
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||| |||||||||||||||| | |||| || ||||| ||||||||||| |||||||| ||  ||| ||||||| |  |||    
T  26869867 aaaaaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttt 26869770  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||  |||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  26869769 tacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttac 26869706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 8247706 - 8247847
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttctag 203  Q
    ||||||||||||||||| |||||| |||||||  |||||||||| |  |||||||| ||  | | ||||||| || ||||||| ||||| ||||||| ||    
T  8247706 taaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtt-ttttacacaagaggctgtttccag 8247804  T
Q  204 aacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     |||||||| ||||| ||||||||| || ||||||||||||||    
T  8247805 gacttgaacccgtgacctttcagtcacatgacaacaactttac 8247847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 54484850 - 54484735
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||| | || |||||    
T  54484850 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttttta 54484751  T
Q  185 cagaagagactgtttc 200  Q
    || ||||| |||||||    
T  54484750 cacaagaggctgtttc 54484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 246
Target Start/End: Original strand, 12914056 - 12914193
Alignment:
Q  108 aagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaact 207  Q
    ||||||||||||| | ||||||||||||||| || |||||||| |||||||| ||   || ||||||| || ||||||| ||||| ||||||| || |||    
T  12914056 aagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgtt-ttttacacaagaggctgtttccaggact 12914154  T
Q  208 tgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| |||| ||||| ||| ||  |||||||||||||    
T  12914155 tgaacttgtgacctttcggtcacattacaacaactttac 12914193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 22122920 - 22123073
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| ||||| |||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| ||   ||||| ||    
T  22122920 gggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt---ttacacaa 22123016  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||||||| || |||||||| || || ||||||||| || |||||||| |||||    
T  22123017 gagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaatttac 22123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 29366736 - 29366880
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    ||||||||||||| |||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || ||||| | ||||| |||||||    
T  29366736 cactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttatacaagaggctgtttc 29366834  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| ||||| |||| |||| || ||||||||||||||    
T  29366835 caggacttgaacccgtgaccttttagtcacatgacaacaactttac 29366880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 39203668 - 39203515
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||||||||||||||||| | | |||| |||||||| ||||||||||| |||||||| ||  | | ||||||   | ||||||| ||    
T  39203668 gggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccc---tgttttacacaa 39203572  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  39203571 gaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttac 39203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 22609919 - 22609765
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| |||| ||||||||||||||| | |||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| |  ||||||| ||    
T  22609919 gggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt--ttttacacaa 22609822  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| |  |||||||| ||| | ||| ||||| || ||||||||||||||    
T  22609821 gaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttac 22609765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 45620879 - 45620987
Alignment:
Q  138 gctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaa 237  Q
    |||||||||| || |||||||| ||  ||| ||||||| || ||||||| ||||| ||||||| ||||||||||| ||||| ||||||||| |  |||||    
T  45620879 gctcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaa 45620978  T
Q  238 caactttac 246  Q
    |||||||||    
T  45620979 caactttac 45620987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 1217247 - 1217089
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| |||| |||||| |||||||| ||  ||| ||||||   | |||||    
T  1217247 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccc---tgtttta 1217151  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||| ||||||| || |||||||| ||||| ||||||||  || ||| ||||||||||    
T  1217150 cacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttac 1217089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 516571 - 516417
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt---gtgtattgcacatagctttaccctattatt 181  Q
    |||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||| |||||||   || |||||  |  ||| ||||||| || ||    
T  516571 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgtt-tt 516473  T
Q  182 ttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaa 237  Q
    ||||| ||||| ||||||| || |||||||| ||||| ||||||||| || |||||    
T  516472 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 33235685 - 33235529
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| |||| |||||||||| ||||||||||| |||||| | |||| ||||||||||| |||||||| ||| ||  ||||||| || ||||||| ||    
T  33235685 gggcaacctggtgcactaaagcttccgcatacgtaaggtctgcg-aggggtcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaa 33235587  T
Q  190 gagactgtttctagaacttgaactcgtgatctttca-gtcgcacgacaacaactttac 246  Q
    ||| || |||  |  | ||||||| |||| |||||| ||| || ||||||||||||||    
T  33235586 gaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaacaactttac 33235529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 6411838 - 6411979
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| | ||||||||||||| ||||| ||||| |||||||| ||  ||| ||||||| |  ||||||| ||||| ||||||  |    
T  6411838 cactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgt--ttttacacaagaggctgtttaca 6411935  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
      |||||||| | ||| || |||||  || ||||||||||||||    
T  6411936 agacttgaacccatgacctatcagttacatgacaacaactttac 6411979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 16735581 - 16735440
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||| ||||| ||||||||| || ||| |||||||| ||||||||||| |||||||| ||  ||| ||||||| || || |||  ||||| ||||||| |    
T  16735581 cactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttctac--aagaggctgtttcga 16735484  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| |||||  || ||||| || ||||||||||||||    
T  16735483 ggacttgaacccgtgacgttacagtcacatgacaacaactttac 16735440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 10795426 - 10795554
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    ||||||| |||| |||| ||||||||||||||| ||||||  ||||||| ||||||||||||  |||||||| ||  ||| |||||||  | |||||||     
T  10795426 gggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccct-gtcttttacac 10795524  T
Q  188 aagagactgtttctagaacttgaactcgtg 217  Q
    ||||| ||||||| || |||||||| ||||    
T  10795525 aagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 25517173 - 25517242
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||  ||| |||||||||||| ||||||| ||| || |||||||| ||||||||||||||||||||    
T  25517173 gggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattg 25517242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 25944630 - 25944466
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattt 182  Q
    ||||| ||||| | |||| | ||||||||||| |||||| |||||| |||||||| |||||||||||| |||||||| ||  ||| || ||| | | |||    
T  25944630 aaaaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgccc-agttttt 25944532  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactg 248  Q
    ||||  |||| | ||||| || |||||||| | ||| ||||||||| |  ||||||||||||||||    
T  25944531 tacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttactg 25944466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 54374362 - 54374486
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    ||||||||||||||||| | |||||| |||||||| |||||||||||| ||| |||| ||  ||| |||||||||| ||||||| |||||  |||||| |    
T  54374362 actaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctatt-ttttacacaagaggttgtttcca 54374460  T
Q  203 gaacttgaactcgtgatctttcagtc 228  Q
      ||||||||  |||| |||||||||    
T  54374461 agacttgaacctgtgacctttcagtc 54374486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 52926215 - 52926291
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||| |||||||  ||| | |||||||||||||||||| |||||| |||||||  ||||||||||| ||||||||    
T  52926215 aaaaaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattg 52926291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 53996581 - 53996724
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||||| |||||| || ||| |||||||| |||||||||||| |||||||| |   ||| ||||||| || ||||||| |||||  ||||||     
T  53996581 cactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtt-ttttacacaagaggttgtttcc 53996679  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |  |||||||| ||||| |||||||||  | |||||||| |||||    
T  53996680 acgacttgaacacgtgacctttcagtcaaatgacaacaaatttac 53996724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 244
Target Start/End: Original strand, 5173717 - 5173876
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattt 182  Q
    |||| |||||||  ||| |||||||||||||||||||| | |||| ||||||||  |||||||||||  ||||||||||   | | |||  || |  |||    
T  5173717 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaacctta--ctttgtttt 5173814  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaacttt 244  Q
    |||| |||||  |||||| || |||||||| ||||| ||||||||| || ||||||||||||    
T  5173815 tacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 7943131 - 7942993
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| | ||||||| ||||| |||||||||||  ||||||| ||  ||  ||||||| || ||||| | ||||  ||||||| |    
T  7943131 cactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtt-ttttagacaagatgctgtttcca 7943033  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaact 242  Q
    | |||||||  ||||| ||| ||||| || ||||||||||    
T  7943032 ggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 44403571 - 44403622
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtg 154  Q
    |||||||||| | |||||||||||||| |||||||| |||||||||||||||    
T  44403571 cactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtg 44403622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 218
Target Start/End: Original strand, 45948854 - 45948968
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| | |||||| |||||||| || |||||||| |   ||| |||||||||| ||||||| |||||  |||||| |    
T  45948854 cactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctatt-ttttacacaagaggttgtttcca 45948952  T
Q  203 gaacttgaactcgtga 218  Q
    | | |||||| |||||    
T  45948953 ggaattgaacccgtga 45948968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 7696977 - 7697043
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||||||||||| || |||||||| ||||| |||| |||| || ||||||||||||||    
T  7696977 ttttacacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttac 7697043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 10300635 - 10300585
Alignment:
Q  100 gtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||| |||||    
T  10300635 gtacattaaagctcccgcatacgtagggtctgggaaggagtcccatcattt 10300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 10870043 - 10870109
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  10870043 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 10870109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 9607345 - 9607202
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||||||||| |  |||||||||||||| ||||| |||  || |||||||  ||  ||| ||||||| || ||||||  ||||| |||||||     
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgtt-ttttacgcaagaggctgtttcc 9607247  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||||||   ||| ||||||||| || ||||||||||||||    
T  9607246 aggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 829458 - 829600
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt-gtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    |||||||||||| ||||||| |||||  |||||||| |||||||||||| |||||||| ||  | ||||||  | ||  |||| | |||||  |||||||    
T  829458 cactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcaactttactatgtt-ctttagacaagaggttgtttct 829556  T
Q  202 agaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||||||||| | ||||||| || |  ||||||||||||||    
T  829557 agaacttgaactcg-ggtctttcaatcacgtgacaacaactttac 829600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 31593001 - 31592882
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||  ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  31593001 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 31592905  T
Q  190 gagactgtttctagaacttgaac 212  Q
    ||| ||||||| || ||||||||    
T  31592904 gaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 34771380 - 34771436
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||| |||||||||||| | |||||| |||||||| ||||||||||| ||||||||    
T  34771380 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattg 34771436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 40968659 - 40968611
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||||||||||||| ||||||||| ||||||| || |||||||||    
T  40968659 cactaaagctcccgcatatgtagggtctaggaaggggtctcaccatttt 40968611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 213
Target Start/End: Original strand, 43114884 - 43114995
Alignment:
Q  103 cactaaagctcccgcatacgta-gggtctgggaagggctcccaccattttgtgtattgcacatag-ctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| | |||||  ||||||| ||||||||||| |||||||| |  ||| | ||||||| || ||||||| ||||| |||||||    
T  43114884 cactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttc 43114982  T
Q  201 tagaacttgaact 213  Q
     || |||||||||    
T  43114983 caggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 199
Target Start/End: Original strand, 45786217 - 45786327
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacag 187  Q
    |||||||  ||| |||||||||||| |||| || |||||| |||||||| ||||||||||||  |||||||| ||  ||| ||||||| || |||||||     
T  45786217 gggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtt-ttttacac 45786315  T
Q  188 aagagactgttt 199  Q
    ||||| ||||||    
T  45786316 aagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 15797380 - 15797305
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||| |||||||  ||| ||||| ||||||| |||| | |||||| |||||||| ||||||||||| ||||||||    
T  15797380 aaaaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattg 15797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 24578085 - 24578010
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||| |||||||  ||| ||||| || ||||||||| |||||||||||||| |  ||||||||||| ||||||||    
T  24578085 aaaaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattg 24578010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 24851297 - 24851364
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    |||||| |||||||  ||| |||||||||||||||||| | ||| || |||||||| |||||||||||    
T  24851297 aaaaaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 33926224 - 33926100
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatt-ttgtgtattgcacatagctttaccctattattttacagaagagactgtttct 201  Q
    ||||||||||| |||||| | ||||||  ||||||| |||||||||| | |||||||| ||| ||| ||||||| |  ||||||| ||||| || ||||     
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgt--ttttacacaagaggctatttcc 33926127  T
Q  202 agaacttgaactcgtgatctttcagtc 228  Q
    || |||||||| | ||| |||||||||    
T  33926126 aggacttgaacccatgacctttcagtc 33926100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 31904867 - 31904929
Alignment:
Q  98 tggtacactaaagctcccgcatacgtagggtctgggaa-gggctcccaccattttgtgtattg 159  Q
    |||| |||||||||||||||| ||||| | |||||||| ||| ||||||||||| ||||||||    
T  31904867 tggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattg 31904929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 14987100 - 14986990
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||| | | |||| ||||| || |||||||||  || |||||||| ||  ||| ||||||| || ||||||| ||||| |||||||    
T  14987100 cactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttc 14987002  T
Q  201 tagaacttgaac 212  Q
     || ||||||||    
T  14987001 caggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 24577976 - 24577920
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||| |||||||| ||| | |||||||||||| || ||||||||||| ||||||||    
T  24577976 cactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattg 24577920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 47624260 - 47624208
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaa 135  Q
    |||||| |||||||  ||| |||||||||||||||||||| |||||| |||||    
T  47624260 aaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 53062089 - 53062037
Alignment:
Q  194 ctgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  53062089 ctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttac 53062037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 1347101 - 1346941
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattt 182  Q
    |||||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | |||    
T  1347101 aaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttt 1347005  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||| | ||||||| || |||||||| ||||| ||||||||| || ||||||||||||||    
T  1347004 tacacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 1346941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 1354760 - 1354913
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  ||| ||||||   | ||||||| ||    
T  1354760 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc---tgttttacacaa 1354856  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  1354857 gaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaactttac 1354913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 246
Target Start/End: Original strand, 12221935 - 12222075
Alignment:
Q  107 aaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattttacagaagagactgtttctaga 204  Q
    |||||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || ||||||| ||||| ||||||| |      
T  12221935 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-ttttacacaagaggctgtttccaag 12222033  T
Q  205 acttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||||| ||||| ||||||||| || ||||||||||||||    
T  12222034 acttgaacccgtgacctttcagtcacatgacaacaactttac 12222075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 240
Target Start/End: Original strand, 29355853 - 29356009
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattattt 182  Q
    |||| |||||||  ||| |||||||||||||||||||| |||||| |||||||| |||||||||  || |||||||| ||  ||| ||||||| || | |    
T  29355853 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtt-tct 29355951  T
Q  183 tacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaa 240  Q
    |||| ||||| ||||||| || |||||||| ||||| ||||||||| || ||||||||    
T  29355952 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 246
Target Start/End: Complemental strand, 9161263 - 9161100
Alignment:
Q  83 aaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt-ttg-tgtattgcacatagctttaccctattat 180  Q
    |||||| ||||||| |||| |||||||||| ||||||||| |||||| | |||||| |||||||||| ||| ||||||| ||  ||| |||| || ||      
T  9161263 aaaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtt-- 9161166  T
Q  181 tttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||||| ||||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  9161165 tttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttac 9161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 258
Target Start/End: Original strand, 32728160 - 32728326
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||| ||   |||| |||| || ||||| ||| ||  ||||||| || ||||||| ||    
T  32728160 gggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaagg-gaccactatttggtatattgtacacagtcttaccctgtt-ttttacataa 32728257  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactggttacaccaa 258  Q
    |||  |||||| | ||||||||   |||| ||||||||| || ||||||||||||||| ||| ||||||    
T  32728258 gaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttactcgttccaccaa 32728326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 3815093 - 3815235
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||| |||||||||||||||  ||||| || ||||||||||| |||||||| ||  ||   |||| |||| ||||||| || || ||||||| |    
T  3815093 cactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatatt-ttttacacaatagtctgtttcca 3815191  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    | |||||||| |||||  |||||||| || ||||||||||||||    
T  3815192 ggacttgaacccgtgacatttcagtcacatgacaacaactttac 3815235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 2166407 - 2166571
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattatt 181  Q
    ||||| |||||||  ||| |||||||||||||| |||  ||||||| |||||||| |||||||||  || |||||||| ||  | | ||| |||  ||||    
T  2166407 aaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcct-gtatt 2166505  T
Q  182 ttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    ||||| |||||  |||||| || |||||||| ||||| ||||||||| ||  ||||||||||||||    
T  2166506 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttact 2166571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 2178040 - 2178204
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccat--tttgtgtattgcacatagctttaccctattatt 181  Q
    ||||| |||||||  ||| |||||||||||||| |||  ||||||| |||||||| |||||||||  || |||||||| ||  | | ||| |||  ||||    
T  2178040 aaaaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcct-gtatt 2178138  T
Q  182 ttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    ||||| |||||  |||||| || |||||||| ||||| ||||||||| ||  ||||||||||||||    
T  2178139 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttact 2178204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 24097715 - 24097649
Alignment:
Q  84 aaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattt 150  Q
    ||||| ||||||| ||| ||||||||||| ||||||||| |||||| |||||||| |||||||||||    
T  24097715 aaaaaagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 12886045 - 12885984
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt 151  Q
    |||||||  ||| ||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  12886045 gggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccatttt 12885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 32579543 - 32579488
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||||| | ||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattg 32579488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Complemental strand, 13267862 - 13267788
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||| |||||||  ||| |||| ||||||||||||||| ||||||  ||||||| ||||||||||| ||||||||    
T  13267862 aaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 12892151 - 12892082
Alignment:
Q  80 aataaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    ||||||||| |||||||  ||| |||||||||||||||||| |  ||||| |||||||| ||||||||||    
T  12892151 aataaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 246
Target Start/End: Original strand, 15866042 - 15866195
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||||  || ||||| || ||||||| ||| |||||| |||||||| ||||||||||| |||||||  ||  ||||||||||| || ||||||  ||    
T  15866042 gggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgtt-ttttacttaa 15866138  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||| ||||||| || | |||||| | ||| |||||| || || | ||||||||||||    
T  15866139 gaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttac 15866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 18277212 - 18277261
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgt 155  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||| ||||    
T  18277212 taaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgt 18277261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 23930130 - 23930199
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||| ||| |||||||||||||||||| | |||||| | |||||| ||||||||| | ||||||||    
T  23930130 gggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattg 23930199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 6808532 - 6808468
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccatt 149  Q
    |||| |||||||  ||| |||||||||||||||||||  |||||| |||||||| ||||||||||    
T  6808532 aaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 20906781 - 20906837
Alignment:
Q  82 taaaaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaaggg 138  Q
    ||||||| | |||||||||| |||||||||||||||||| |  ||||||||||||||    
T  20906781 taaaaaaagagcaacttggttcactaaagctcccgcatatgcggggtctgggaaggg 20906837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 383781 - 383832
Alignment:
Q  108 aagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||||||||||||| |||||||| |||||| |||||| |||| ||||||||    
T  383781 aagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattg 383832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 10734922 - 10734970
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    ||||||||||||||||||| |||||| ||||||||  ||||||| ||||    
T  10734922 actaaagctcccgcatacgcagggtccgggaagggggcccaccactttg 10734970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 11395879 - 11395831
Alignment:
Q  104 actaaagctcccgcatacgtagggtctgggaagggctcccaccattttg 152  Q
    ||||||||||||||||||| ||| || |||||||| |||||||| ||||    
T  11395879 actaaagctcccgcatacgcaggatccgggaaggggtcccaccactttg 11395831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 14553626 - 14553489
Alignment:
Q  109 agctcccgcatacgtagggtctgggaagggctcccacca--ttttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaac 206  Q
    |||||||||||||  |||||||  |||||| ||||||||  ||| |||||||  ||| ||| |||||||||| ||||||| ||||  || |||| || ||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctatt-ttttacacaagaagctatttccaggac 14553528  T
Q  207 ttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||  |||| |||| |||| || ||||||||||||||    
T  14553527 ttgaacctgtgaccttt-agtcacatgacaacaactttac 14553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 29016301 - 29016333
Alignment:
Q  106 taaagctcccgcatacgtagggtctgggaaggg 138  Q
    ||||||||||||||||| |||||||||||||||    
T  29016301 taaagctcccgcatacgcagggtctgggaaggg 29016333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 10929 - 10787
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttcta 202  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||| ||  |||  |||||| || ||||||| |||||  |||||  |    
T  10929 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgtt-ttttacacaagaggttgttttca 10831  T
Q  203 gaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||||| ||||| ||| ||||| || ||||||||||||||    
T  10830 gaccttgaacccgtgaccttccagtcacatgacaacaactttac 10787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 85 - 251
Target Start/End: Original strand, 13022 - 13186
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| ||||||||| |||||||||| ||||||||||||||| ||||||||||  |||||||| ||  ||| ||||| | |  |||||    
T  13022 aaaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgt--tttta 13119  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttactggtt 251  Q
    |  ||||| ||||||| || ||||||||  |||| ||||||||| || |||||||||||||| ||||    
T  13120 cgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttaccggtt 13186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 30714 - 30556
Alignment:
Q  85 aaaaggggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattatttta 184  Q
    |||| |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| |||||||| ||  |||  |||||   | |||||    
T  30714 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccc---tgtttta 30618  T
Q  185 cagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    || ||||| ||||||| || ||||||||  |||| ||||||||| || ||||||||||||||    
T  30617 cacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttac 30556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 59098 - 58954
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccatttt--gtgtattgcacatagctttaccctattattttacagaagagactgtttc 200  Q
    |||||||||||||||||||| || |||||||||||| ||||||||||||  |||||||| ||  ||  ||||||| || ||||| | ||||| |||||||    
T  59098 cactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtt-ttttatacaagaggctgtttc 59000  T
Q  201 tagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
     || |||||||| ||||| ||||||||| || ||||| || |||||    
T  58999 caggacttgaacccgtgacctttcagtcacatgacaataagtttac 58954  T

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Target: scaffold1176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 246
Target Start/End: Original strand, 1591 - 1743
Alignment:
Q  91 ggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaag 190  Q
    |||||| |||| ||||||||||||||||||||  ||||| |||||||| ||||| ||||| |||||||| |   ||| ||| ||   | ||||||| |||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcc---tgttttacacaag 1687  T
Q  191 agactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||  |||||  || |||||||| | ||| ||||||||| || ||||||||||||||    
T  1688 aggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttac 1743  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 72870 - 72998
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| |||| |||||||||||||||||||| ||| || |||||||| | | ||||||| |||||||| |   ||| ||||| | || ||||||| ||    
T  72870 gggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgtt-ttttacacaa 72968  T
Q  190 gagac-tgtttctagaacttgaactcgtga 218  Q
    ||||| ||||||||| |||||||| |||||    
T  72969 gagacttgtttctaggacttgaacccgtga 72998  T

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Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 228
Target Start/End: Complemental strand, 11261 - 11126
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaa 189  Q
    ||||||| |||| ||||| |||||||||||| | |||||| |||||||  ||||||||||| |||||||| |   ||| ||||    || ||||||| ||    
T  11261 gggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttac---tttgttttacacaa 11165  T
Q  190 gagactgtttctagaacttgaactcgtgatctttcagtc 228  Q
    ||| ||||||| || |||||||| ||||| |||||||||    
T  11164 gaggctgtttccaggacttgaacccgtgacctttcagtc 11126  T

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Target: scaffold0187 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 10072 - 10206
Alignment:
Q  109 agctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaactt 208  Q
    |||||| ||||| | |||||| |||||||| |||||| |||| |||||||| ||  ||  |||| || ||   ||||| ||||| ||||||| || ||||    
T  10072 agctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtt---ttacacaagaggctgtttccaggactt 10168  T
Q  209 gaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||||| || ||||||||||||||    
T  10169 gaacccgtgacctttcagtcacatgacaacaactttac 10206  T

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Target: scaffold0187; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 20400 - 20534
Alignment:
Q  109 agctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaactt 208  Q
    |||||| ||||| | |||||| |||||||| |||||| |||| |||||||| ||  ||  |||| || ||   ||||| ||||| ||||||| || ||||    
T  20400 agctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgtt---ttacacaagaggctgtttccaggactt 20496  T
Q  209 gaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    |||| ||||| ||||||||| || ||||||||||||||    
T  20497 gaacccgtgacctttcagtcacatgacaacaactttac 20534  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 226458 - 226564
Alignment:
Q  140 tcccaccattttgtgtattgcacatagctttaccctattattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaaca 239  Q
    |||||||||||  ||||||| |   ||| ||||||| || ||||| | ||||| |||||||||| |||||||  ||||| ||||||||| || |||||||    
T  226458 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 226557  T
Q  240 actttac 246  Q
    |||||||    
T  226558 actttac 226564  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 48637 - 48706
Alignment:
Q  90 gggcaacttggtacactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    |||||||  ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||| ||||||||    
T  48637 gggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattg 48706  T

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Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 24149 - 24205
Alignment:
Q  103 cactaaagctcccgcatacgtagggtctgggaagggctcccaccattttgtgtattg 159  Q
    ||||| |||||||||||| | |||||| |||||||| ||||||||||| ||||||||    
T  24149 cactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattg 24205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 43172 - 43106
Alignment:
Q  180 ttttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttac 246  Q
    ||||||| ||||| |||||||||| || ||||||||||| |||||| || || ||||| ||||||||    
T  43172 ttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttac 43106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 4202 - 4133
Alignment:
Q  178 tattttacagaagagactgtttctagaacttgaactcgtgatctttcagtcgcacgacaacaactttact 247  Q
    ||||||||| |||||  |||||| || |||||||| ||||| ||||||||| ||  ||||||||||||||    
T  4202 tattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttact 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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