View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1030-Insertion-5 (Length: 327)
Name: NF1030-Insertion-5
Description: NF1030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1030-Insertion-5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 8 - 327
Target Start/End: Complemental strand, 2631205 - 2630886
Alignment:
| Q |
8 |
ccattaagtacgttttgacaatctggaggcaaattaatgtcgacgggcccatggaagttaatttgatttaaacagtttcatgataacaacttcgcgggag |
107 |
Q |
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| T |
2631205 |
ccattaagtacgttttgacaatctggaggcaaattaatgtcgacgggcccatggaagttaatttgatttaaacagtttcatgataacaacttcgcgggag |
2631106 |
T |
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| Q |
108 |
tttggagtagatcgattaggtgcatgtcatatgcaatcaacaaatcgaattcagcattatatttataatgttagctttatccatttggctctgaaaggat |
207 |
Q |
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| T |
2631105 |
tttggagttgatcgattagatgcatgtcatatgcaatcaacaaatcgaattcagcattatatttataatgttagctttatccatttggctctgaaaggat |
2631006 |
T |
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| Q |
208 |
ctttaagaaacgaatggttgaatattgactcaaatttgatgggcgaagtgctgccaaaatcgtggttagcattttggtgtctttgccttcgatgcttttg |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |
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| T |
2631005 |
ctttaagaaacgaatggttgaatattgactcaaatttgatgggcgaagtgctgccaaaatcgtggttagcacttcggtgtctttgtcttcgatgcttttg |
2630906 |
T |
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| Q |
308 |
agtgtctttgttaattcttg |
327 |
Q |
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|||||||||||||||||||| |
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| T |
2630905 |
agtgtctttgttaattcttg |
2630886 |
T |
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