View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10300_low_2 (Length: 439)
Name: NF10300_low_2
Description: NF10300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10300_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 14 - 329
Target Start/End: Original strand, 39110538 - 39110853
Alignment:
| Q |
14 |
ttaaccctatggtaaccattcaatctacagcatactgtattgctagtaaaattgcagaatcacttaaggaagaatagacagagattgatgaataataatg |
113 |
Q |
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| T |
39110538 |
ttaaccctatggtaaccattcaatctacagcatactgtattgctagtaaaattgcagaatcacttaaggaagaatagacagagattgatgaataataatg |
39110637 |
T |
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| Q |
114 |
aagtttgtattatttcaataaaagaatttcattgaaaatgtacatgtacttttcgnnnnnnnacatgatgtaactagtattgctggtgttaacaaaataa |
213 |
Q |
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| T |
39110638 |
aagtttgtattatttcaataaaagaatttcattgaaaatgtacatgtacttttcgtttttttacatgatgtaactagtattgctggtgttaacaaaataa |
39110737 |
T |
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| Q |
214 |
agtttcatgtaaatgtgtcaaagtttattatgcgagactaactagcaatgaaatttaaatcctctcgtaactaaatccaatcggaggggtgattctattg |
313 |
Q |
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| T |
39110738 |
agtttcatgtaaatgtgtcaaagtttattatgcgagactaactagcaatggaatttaaatcctctcgtaactaaatccaatcggaggggtgattctattg |
39110837 |
T |
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| Q |
314 |
gtgatttcacccttaa |
329 |
Q |
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| T |
39110838 |
gtgatttcacccttaa |
39110853 |
T |
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