View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10300_low_4 (Length: 306)
Name: NF10300_low_4
Description: NF10300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10300_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 8 - 292
Target Start/End: Complemental strand, 28527024 - 28526740
Alignment:
| Q |
8 |
gagcagagacataaatgatttgagcgcaacatcttcacttcaaaaccctaagacaatgagtatatgaatcgcctcactttgttgttcaacacttacatat |
107 |
Q |
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| T |
28527024 |
gagcaaagacataaatgatttgagcgcaacatcttcacttcaaaaccctaagacaatgagtatatggatcgcctcactttgttgttcaacacttacatat |
28526925 |
T |
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| Q |
108 |
ttatttaatgcgagacttctaactcacttctattttccaacactttcaccagaacttgagctgcaacaactaatggatcatgcttggataagtaatgggg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
28526924 |
ttatttaatgcgagacttctaactcacttctattttccaacactttcaccagaacttgagctgcaacaactaatggatcatgcttggataagtaatgagg |
28526825 |
T |
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| Q |
208 |
tatttgggtagtttgtacagtatcattcaaggtatgaagcaaaaataatcatcttgatgcttctgttacttatataagtaacata |
292 |
Q |
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||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
28526824 |
tatttaggtagtttgcacagtatcattcaaggtatgaagcaaaaataatcctcttgatgcttctgttacttatataagtaacata |
28526740 |
T |
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