View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10301_1D_low_28 (Length: 219)
Name: NF10301_1D_low_28
Description: NF10301_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10301_1D_low_28 |
 | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 1282737 - 1282934
Alignment:
| Q |
3 |
caaagagttggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaagg |
102 |
Q |
| |
|
||||||| ||||||| ||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||||| || |
|
|
| T |
1282737 |
caaagagaaggtacatgttgactaacatcaccatcaccttctagtgatgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatctaggg |
1282836 |
T |
|
| Q |
103 |
catttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || |||||||||||| |
|
|
| T |
1282837 |
catttggacctcttgatttgagcaagcgtttgtgattgtattcagtattaacaaaggttatgtaaaagcctctaaggtgaagtagttttgctagtttg |
1282934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 35776276 - 35776316
Alignment:
| Q |
129 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
169 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35776276 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35776316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 35842083 - 35842123
Alignment:
| Q |
129 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
169 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35842083 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35842123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 35854591 - 35854631
Alignment:
| Q |
129 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
169 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35854591 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35854631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 35869200 - 35869240
Alignment:
| Q |
129 |
cgtttgtgattgtattcagtgttaacaaaggttatgtgaaa |
169 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
35869200 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaa |
35869240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 122; Significance: 9e-63; HSPs: 29)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 4618605 - 4618802
Alignment:
| Q |
3 |
caaagagttggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaagg |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||| | || ||||| ||||||||| || | || ||| |||| || || |||||||| || | |
|
|
| T |
4618605 |
caaagagttggtacatcttgactaacatcaccatcaccttccattggtgttaaaccatctggaatgctctcaaagttaaagtccgtgaaaccatcaaaag |
4618704 |
T |
|
| Q |
103 |
catttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4618705 |
cctttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
4618802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 4594329 - 4594511
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || ||||| | || ||||||||||||||| || ||||| ||||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
4594329 |
tcttgactaacatcaccatcaccttccattggtgttagaccatctggtatggtttcaaagctaaaaccagggaaaccatctaaggcatttggacctcttg |
4594428 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
4594429 |
atttgagcaaacgtttatgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagaagttttgcaagtttg |
4594511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 4603423 - 4603610
Alignment:
| Q |
12 |
ggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggac |
111 |
Q |
| |
|
||||||||||||||||||| | | || ||||| | | |||||| ||||||||||||||||| |||||||||||||| || || ||||||||||| |||| |
|
|
| T |
4603423 |
ggtacatcttgactaacattatcatcaccttccatcggtgttagtccatctgggattgtttcaaagctaaaatcagtgaagccgtctaaggcattaggac |
4603522 |
T |
|
| Q |
112 |
ctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
4603523 |
ctcttgatttgagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaaggtgaaatagttttgctagttt |
4603610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 4489007 - 4488825
Alignment:
| Q |
17 |
atcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctctt |
116 |
Q |
| |
|
||||||||||||||| || || || ||| || |||| ||||||||| || || || |||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
4489007 |
atcttgactaacatcgccatcaccatctgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaaccatcaaaggcatttggacctctt |
4488908 |
T |
|
| Q |
117 |
gatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||| ||||||| |
|
|
| T |
4488907 |
gatttgagcaagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagtagttttcctagttt |
4488825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 4517659 - 4517840
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || ||||||| | |||| ||||||||| || || || ||| |||||||||| |||||||| ||||| ||||||||||||| |
|
|
| T |
4517659 |
tcttgactaacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttg |
4517758 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4517759 |
atttgagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaagatgaagaagttttgctagttt |
4517840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 4565342 - 4565530
Alignment:
| Q |
12 |
ggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggac |
111 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| | ||||||||||||||| || ||||| |||| |||| || ||||||||||||||||||||| |
|
|
| T |
4565342 |
ggtacatcttgactaacatcaccatcaccttctatcggtgttagaccatctggtatggtttcaaagcaaaaaccacgggaaccatctaaggcatttggac |
4565441 |
T |
|
| Q |
112 |
ctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
4565442 |
ctcttgattttagcaatcgtttatgattgtattcagtgttgacaaaggttatatgaaatcctctaaggtgaagaagttttgcaagtttg |
4565530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 4623626 - 4623808
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || ||||| | || ||||| ||||||||| || || || ||| |||| || || |||||||| ||||| ||||||||||||| |
|
|
| T |
4623626 |
tcttgactaacatcaccatcaccttccattggtgttaaaccatctggaatggtctcaaagttaaagtccgtgaaaccatcaaaggcctttggacctcttg |
4623725 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
4623726 |
atttgagcaagcgtttgtgattgtattcggtgtgaccaaaggttatgtgaaagcctttaaggtaaagaagctttgctagtttg |
4623808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 197
Target Start/End: Original strand, 4581333 - 4581512
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
|||||| ||||||||| || ||||||| | |||| ||||||||| || || || ||| ||||||| || |||||||| || || ||||||||||||| |
|
|
| T |
4581333 |
tcttgattaacatcactatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcggtgaaaccatcaaacgcttttggacctcttg |
4581432 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagt |
197 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581433 |
atttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagt |
4581512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 3173322 - 3173503
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || ||||| | || |||| ||||||||| || || || ||| |||||||| | |||||||| |||||||||||||| ||| |
|
|
| T |
3173322 |
tcttgactaacatcaccatcaccttccattgaagttaaaccatctggtatagtctcaaagttaaaatcattgaaaccatcaaaggcatttggaccctttg |
3173421 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||| |
|
|
| T |
3173422 |
atttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagttt |
3173503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 4507291 - 4507412
Alignment:
| Q |
79 |
taaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaag |
178 |
Q |
| |
|
|||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
4507291 |
taaaatcagtgaaaccatcaaaggcattttcacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctcgaag |
4507390 |
T |
|
| Q |
179 |
gtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||||| ||||||||| |
|
|
| T |
4507391 |
gtgaagaagcttagctagtttg |
4507412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 197
Target Start/End: Original strand, 4627455 - 4627648
Alignment:
| Q |
4 |
aaagagttggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggc |
103 |
Q |
| |
|
|||||| ||||| |||||| ||||||| || || |||||||||| ||||| ||||||||| || || || ||| |||||||| |||||||| ||||| |
|
|
| T |
4627455 |
aaagagatggtatgtcttgagtaacatcgccatcaccttctagtggtgttaaaccatctggtatggtctcaaaggtaaaatcatcgaaaccatcaaaggc |
4627554 |
T |
|
| Q |
104 |
atttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagt |
197 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
4627555 |
attttcacctcttgatttgagcaaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagtaattttgctagt |
4627648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 4612492 - 4612345
Alignment:
| Q |
53 |
tagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgtta |
152 |
Q |
| |
|
|||||||||||| || | || ||| |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4612492 |
tagaccatctggtatagcctcaaaggtaaaatcagtgaaaccaacaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttg |
4612393 |
T |
|
| Q |
153 |
acaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4612392 |
acgaatgttatgtgaaagcctctaaggtgaagaagttttgctagtttg |
4612345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 199
Target Start/End: Original strand, 4558501 - 4558625
Alignment:
| Q |
75 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
174 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||| |||| |
|
|
| T |
4558501 |
aagctaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaatcctc |
4558600 |
T |
|
| Q |
175 |
taaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
||||||||||||| ||||||||||| |
|
|
| T |
4558601 |
taaggtgaagaagttttgctagttt |
4558625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 195
Target Start/End: Original strand, 4575807 - 4575951
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| ||||||||| || || || ||| |||| ||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4575807 |
gttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgt |
4575906 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgcta |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
4575907 |
taacaaaggttatgtgaaagcctctaaggtgaagcagttttgcta |
4575951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 4265833 - 4265688
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||||||||||||| || || || || |||| ||| | |||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4265833 |
gttagaccatctggtatggtctcaaacttaaagtcactgaaaccatcaagagaatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
4265734 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctag |
196 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4265733 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttcctag |
4265688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 4503102 - 4502943
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || ||||| | | |||| ||||||||| || || || ||| |||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
4503102 |
tcttgactaacatcaccatcaccttccaccggagttaaaccatctggtatggtctcaaaggtaaaatcattgaaaccatcaaaggcatttggacctcttg |
4503003 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaa |
177 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
4503002 |
atttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaa |
4502943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 4482217 - 4482350
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| ||||||||| || ||||| ||| |||||||||| |||||||| ||||| |||||||| |||||||| ||||| ||||||||||||||||| |||| |
|
|
| T |
4482217 |
gttaaaccatctggtatcgtttcaaaggtaaaatcagtgaaaccatcaaaggcttttggaccccttgattttagcaaacgtttgtgattgtattcggtgt |
4482316 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaag |
184 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |
|
|
| T |
4482317 |
tgacaaaggttatgtgaaagcctctaaggtgaag |
4482350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 4586951 - 4587132
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| || || || || |||| ||||||||| || || || |||||||||||||| ||| |||| |||||||||||| |||||| |
|
|
| T |
4586951 |
tcttgactaacatcaccatcaccatccgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaatcatcaaaggcatttggagctcttg |
4587050 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
| || ||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| || |||||||| |
|
|
| T |
4587051 |
acttaagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaatcctcgaaggtgaagaagtttagctagttt |
4587132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 4513731 - 4513611
Alignment:
| Q |
75 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
174 |
Q |
| |
|
|||| |||||| || |||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4513731 |
aagcgaaaatcggtgaaaccatcaaaagcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctc |
4513632 |
T |
|
| Q |
175 |
taaggtgaagaagctttgcta |
195 |
Q |
| |
|
|||||||||| || ||||||| |
|
|
| T |
4513631 |
taaggtgaagtagttttgcta |
4513611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 51 - 199
Target Start/End: Original strand, 4569426 - 4569570
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| ||||||||| || || || ||| |||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
4569426 |
gttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttgatttgagcaaatgtttgtgat----ttcggtgt |
4569521 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4569522 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagttttgctagttt |
4569570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 4258991 - 4258803
Alignment:
| Q |
12 |
ggtacatcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggac |
111 |
Q |
| |
|
||||| |||||| ||||||| || || ||||| | || || ||||||||| | || || || ||| |||||||| | |||||||| | ||||||| || |
|
|
| T |
4258991 |
ggtacgtcttgagtaacatcgccatcaccttccactggagtcagaccatcttgaatagtctcaaaggtaaaatcaatgaaaccatcaacggcattttcac |
4258892 |
T |
|
| Q |
112 |
ctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||| ||| |||||||||||| ||||||||| |
|
|
| T |
4258891 |
ctcttgatttgagcaaacgtttgtgattatattcagtgttgacaaaggttatgtgaaaacctttaaagtgaagaagcttagctagtttg |
4258803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 4572357 - 4572465
Alignment:
| Q |
90 |
aaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagct |
189 |
Q |
| |
|
|||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| | |
|
|
| T |
4572357 |
aaaccatcaaaggcattttgacctcttgacttgagcaaccgtttgtgattgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaaatt |
4572456 |
T |
|
| Q |
190 |
ttgctagtt |
198 |
Q |
| |
|
||||||||| |
|
|
| T |
4572457 |
ttgctagtt |
4572465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 4471323 - 4471414
Alignment:
| Q |
108 |
ggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4471323 |
ggacctcttgaattgagcaaggctttgtgattgtattcagtgttgacaaacgttatgtgaaagcctctaaggtgaagaagctttgctagttt |
4471414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 195
Target Start/End: Original strand, 4562014 - 4562158
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| ||||||||| || || || ||| |||| ||||| |||||||| ||||||||| |||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
4562014 |
gttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttgattt-agcaaacgtttgtgattgtattcagtgt |
4562112 |
T |
|
| Q |
151 |
taacaaagg-ttatgtgaaagcctctaaggtgaagaagctttgcta |
195 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| || ||||||| |
|
|
| T |
4562113 |
taacaaaggtttatgtgaaagcctcttaggtgaagcagttttgcta |
4562158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 200
Target Start/End: Original strand, 4599489 - 4599664
Alignment:
| Q |
25 |
taacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaag-gcatttggacctcttgatttga |
123 |
Q |
| |
|
|||||||||| || || |||| || |||| ||||||||| || || |||||| ||||||||| ||||||| || | | ||| |||||||||||||||| |
|
|
| T |
4599489 |
taacatcaccatcaccatctattggagttaaaccatctggaatagtctcgaaggaaaaatcagtgaaaccat-tacgagaattaggacctcttgatttga |
4599587 |
T |
|
| Q |
124 |
gcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
||||||||||||||||||| || ||||| || |||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
4599588 |
gcaagcgtttgtgattgtactcggtgttcacgaaggttatgtaaaatcctctaaggtgaagaatctttgctagtttg |
4599664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 4462587 - 4462707
Alignment:
| Q |
79 |
taaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaag |
178 |
Q |
| |
|
|||| ||||| |||||||||| | ||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
4462587 |
taaagtcagtgaaaccatctagagaattaggacctcttgaattgagcaagcaattgtgattgtattcagtgttgacaaaggttatgtgaaaacctctaag |
4462686 |
T |
|
| Q |
179 |
gtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||||| || ||| ||||||| |
|
|
| T |
4462687 |
gtgaagtagttttcctagttt |
4462707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 4255545 - 4255478
Alignment:
| Q |
91 |
aaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaag |
158 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
4255545 |
aaccatcaaaggcttttggacctcttgattcgagcaagcgtttgtgattgtattcggtgttgacaaag |
4255478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 4298271 - 4298174
Alignment:
| Q |
54 |
agaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgtt |
151 |
Q |
| |
|
||||||||||| || || || |||||||| | || |||||||| || || |||||||| ||||||| ||||| | |||||||||||||||| ||||| |
|
|
| T |
4298271 |
agaccatctggaatagtctcaaagctaaagttggtgaaaccatcaaaagcttttggaccccttgattcgagcaggtgtttgtgattgtattcggtgtt |
4298174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 144
Target Start/End: Complemental strand, 4483569 - 4483534
Alignment:
| Q |
109 |
gacctcttgatttgagcaagcgtttgtgattgtatt |
144 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4483569 |
gacctcttgatttgagcaaacgtttgtgattgtatt |
4483534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 1079 - 1259
Alignment:
| Q |
20 |
ttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgat |
119 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
1079 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1178 |
T |
|
| Q |
120 |
ttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||| ||| |||||||||||| |
|
|
| T |
1179 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttg |
1259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 1675842 - 1676022
Alignment:
| Q |
20 |
ttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgat |
119 |
Q |
| |
|
||||||||||||||| || |||||||||| |||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| |||||||||||||| |
|
|
| T |
1675842 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1675941 |
T |
|
| Q |
120 |
ttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||| ||| |||||||||||| |
|
|
| T |
1675942 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttg |
1676022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 20862562 - 20862438
Alignment:
| Q |
75 |
aagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctc |
174 |
Q |
| |
|
|||| ||| ||||| |||||||| |||| ||||||| |||| || |||||||||||||||||||||||||| || ||||| ||||||| |||||||| |
|
|
| T |
20862562 |
aagcgaaagtcagtgaaaccatcaaagggtattggacccattgacttaagcaagcgtttgtgattgtattcagtattgacaaatgttatgtaaaagcctc |
20862463 |
T |
|
| Q |
175 |
taaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||||||||| || ||||||||||| |
|
|
| T |
20862462 |
taaggtgaagtagttttgctagttt |
20862438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 51 - 200
Target Start/End: Original strand, 2176 - 2325
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| |||||| || || || ||||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2176 |
gttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgt |
2275 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2276 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
2325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 51 - 200
Target Start/End: Complemental strand, 2227 - 2078
Alignment:
| Q |
51 |
gttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgt |
150 |
Q |
| |
|
|||| |||||| || || || ||||||| |||||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2227 |
gttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgt |
2128 |
T |
|
| Q |
151 |
taacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2127 |
tgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
2078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 24104414 - 24104596
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
|||||| |||||||||| | ||||| | || |||||||||||||| || || || ||| |||| ||| | |||||||| | | ||| ||| |||||| |
|
|
| T |
24104414 |
tcttgagtaacatcaccattgccttccattggagttagaccatctggtatggtctcaaagttaaagtcattgaaaccatcaagagaattaggatctcttg |
24104513 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttg |
200 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24104514 |
attcgagcaagcgtttgtgattgtattcggtgttcacgaaggttatgtgaaagcctctaaggtgaagaagctttcctagtttg |
24104596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 26903639 - 26903670
Alignment:
| Q |
129 |
cgtttgtgattgtattcagtgttaacaaaggt |
160 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26903639 |
cgtttgtgattgtattcagtgttaacaaaggt |
26903670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 3088064 - 3088245
Alignment:
| Q |
18 |
tcttgactaacatcaccgtctccttctagtgttgttagaccatctgggattgtttcgaagctaaaatcagtcaaaccatctaaggcatttggacctcttg |
117 |
Q |
| |
|
||||||||||||||||| | ||||| | || |||||||||||| |||| || || ||| ||||||||| |||||||| | | ||| | |||||||| |
|
|
| T |
3088064 |
tcttgactaacatcaccattaccttccattggagttagaccatcttggatagtctcaaagacaaaatcagtgaaaccatcaagagaattagaacctcttg |
3088163 |
T |
|
| Q |
118 |
atttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagttt |
199 |
Q |
| |
|
|||| ||||| || |||||||||||||| || || ||||||||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
3088164 |
atttaagcaaacggttgtgattgtattcggtattgacaaaggttatgtgaaagcctttaaggtgaagaagttttgctagttt |
3088245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 1349641 - 1349579
Alignment:
| Q |
103 |
catttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttaacaaaggttatgt |
165 |
Q |
| |
|
|||| |||||| | |||||||| ||||||||||| ||| |||||||||| ||||| ||||||| |
|
|
| T |
1349641 |
cattaggacctatggatttgagtaagcgtttgtggttgaattcagtgttgacaaatgttatgt |
1349579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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