View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10301_2D_low_13 (Length: 417)
Name: NF10301_2D_low_13
Description: NF10301_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10301_2D_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 344; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 1 - 405
Target Start/End: Original strand, 34087652 - 34088045
Alignment:
| Q |
1 |
ttctttaacaacagcaactccaaaaccatcatagttatcacttttagagttccgttattcaagatcttttgactaaagctatcagagggtgtcaaacact |
100 |
Q |
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| T |
34087652 |
ttctttaacaacagcaactccaaaaccatcatagttatcacttttagagttccgttattcaagatcttttgactaa-gctatcagagggtgtcaaacact |
34087750 |
T |
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| Q |
101 |
gaaactaatgattaacatgtgataatcttgatttagtctttaatcatgattagcgtgacatgctgctattgctaatccaaaactaaaaacttaacttgga |
200 |
Q |
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| T |
34087751 |
gaaactaatgattaacatgtgataatcttcatttagtctttaatcatgattagcgtgacatgct---attgctaatccaaaactaaaaacttaacttgga |
34087847 |
T |
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| Q |
201 |
aattgaagtgtgaagaaaacgcaatgatgtaaacatggtaatattaattagttaatctaataataatcctacggacaaaaataatgaatgtacagcgtac |
300 |
Q |
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| T |
34087848 |
aattgaagtgtgaagaaaacgcaatgatgtaaacatggtaatattaatta----atctaataataatcctacggacaaaaataatgaatgtacagcgtac |
34087943 |
T |
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| Q |
301 |
gataagaagaagggatgaattccatccaatcaattgaaatggaaatggaattgagattgatgggacttggcaccactatttttattgcttgatcttgttg |
400 |
Q |
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| T |
34087944 |
gataaga---agggatgaattccatccaatcaattgaaatggaattggaattgagattgatgggacttggcaccactatttttattgcttgatcttgttg |
34088040 |
T |
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