View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10301_2D_low_61 (Length: 226)
Name: NF10301_2D_low_61
Description: NF10301_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10301_2D_low_61 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 37055341 - 37055133
Alignment:
| Q |
18 |
cttggttcctttatcatcatcacaaaggactcacattttgagtgttggtgctttaatcaatgcagctggaagcttccatgttcatactttacaagataac |
117 |
Q |
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| T |
37055341 |
cttggttcctttatcatcatcacaaaggactcacattttgagtgttggtgctttaatcaatgcagctggaagcttccatgttcatactttacaagataac |
37055242 |
T |
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| Q |
118 |
tattacatgaaagaacaagaaaatgaaaagaagcaggttcagaaaatctcaggtttagatgagaatgaagagaaacaaggttttatagttggaaagttta |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
37055241 |
tattacatgaaagaacaagaaaatgaaaagaagcaggttcagaaaatctcaggtttagatgagaatgaagagaaacaaggttttatagttgaaaagttta |
37055142 |
T |
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| Q |
218 |
gatctttac |
226 |
Q |
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||||||||| |
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| T |
37055141 |
gatctttac |
37055133 |
T |
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