View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10301_2D_low_63 (Length: 221)
Name: NF10301_2D_low_63
Description: NF10301_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10301_2D_low_63 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 4419428 - 4419631
Alignment:
| Q |
1 |
tttcgaaatattccaatacaatgtacaaatacaaatacatgcaatatatattccttacactaacctcatcaatattttgtcaaagaaaaaccttcagaaa |
100 |
Q |
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| T |
4419428 |
tttcgaaatattccaatacaatgtacaaatacaaatacatgcaatatatattccttacactaacctcatcaatattttgtcaaagaaaaaccttcagaaa |
4419527 |
T |
|
| Q |
101 |
tttctccttacacatctcataaaattattattaatttctccttcatccttactcgttatcttagattgctaccatctctaaacaagttttataagtcatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
4419528 |
tttctccttacacatctcataaaattattattaatttctccttcatccttactcgttatcttagattgctaccatctctaaaaaagttttataagtcatc |
4419627 |
T |
|
| Q |
201 |
acat |
204 |
Q |
| |
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|||| |
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|
| T |
4419628 |
acat |
4419631 |
T |
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