View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10302_low_5 (Length: 378)

Name: NF10302_low_5
Description: NF10302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10302_low_5
NF10302_low_5
[»] chr4 (102 HSPs)
chr4 (190-286)||(46484656-46484747)
chr4 (287-356)||(36871159-36871228)
chr4 (288-359)||(9095949-9096020)
chr4 (286-359)||(1868881-1868954)
chr4 (286-355)||(31413778-31413847)
chr4 (287-359)||(7795025-7795097)
chr4 (287-359)||(24310509-24310581)
chr4 (288-364)||(54848150-54848226)
chr4 (288-359)||(46791979-46792050)
chr4 (286-359)||(21766557-21766630)
chr4 (286-359)||(45678273-45678346)
chr4 (287-355)||(8848711-8848779)
chr4 (287-363)||(37731926-37732002)
chr4 (285-359)||(9827971-9828045)
chr4 (284-359)||(32294748-32294820)
chr4 (287-364)||(39241284-39241361)
chr4 (299-359)||(46799779-46799839)
chr4 (285-360)||(41010156-41010231)
chr4 (309-359)||(4577590-4577640)
chr4 (287-359)||(8614190-8614259)
chr4 (286-324)||(29577470-29577508)
chr4 (286-359)||(4511824-4511897)
chr4 (286-359)||(27384186-27384259)
chr4 (287-324)||(36110134-36110171)
chr4 (286-355)||(46686244-46686312)
chr4 (287-359)||(1580271-1580342)
chr4 (287-364)||(15515795-15515874)
chr4 (311-359)||(55960735-55960783)
chr4 (285-324)||(43864032-43864071)
chr4 (285-324)||(48791631-48791670)
chr4 (309-359)||(6126886-6126936)
chr4 (285-359)||(7161513-7161586)
chr4 (317-359)||(9162107-9162149)
chr4 (309-359)||(29577424-29577474)
chr4 (286-364)||(33776907-33776984)
chr4 (286-364)||(46173549-46173627)
chr4 (309-359)||(54803316-54803366)
chr4 (317-359)||(55996463-55996505)
chr4 (286-359)||(1728075-1728148)
chr4 (287-359)||(42169712-42169785)
chr4 (287-320)||(43511685-43511718)
chr4 (311-360)||(48650243-48650292)
chr4 (287-335)||(4974111-4974159)
chr4 (285-317)||(8485575-8485607)
chr4 (284-324)||(31318750-31318790)
chr4 (311-359)||(36364773-36364821)
chr4 (288-324)||(38960694-38960730)
chr4 (285-353)||(39605977-39606044)
chr4 (319-359)||(40755964-40756004)
chr4 (286-355)||(43982905-43982976)
chr4 (287-359)||(44133544-44133616)
chr4 (285-324)||(1987747-1987786)
chr4 (286-337)||(4106053-4106103)
chr4 (285-324)||(4577555-4577594)
chr4 (285-364)||(26440674-26440753)
chr4 (288-359)||(28676140-28676211)
chr4 (287-330)||(36488492-36488535)
chr4 (317-359)||(9472501-9472543)
chr4 (317-359)||(17805493-17805535)
chr4 (287-337)||(19748648-19748698)
chr4 (287-337)||(19791108-19791158)
chr4 (286-324)||(22893868-22893906)
chr4 (286-324)||(22945536-22945574)
chr4 (317-359)||(23347816-23347858)
chr4 (285-359)||(32621636-32621710)
chr4 (309-359)||(36110167-36110217)
chr4 (317-359)||(39881018-39881060)
chr4 (286-344)||(42490919-42490977)
chr4 (287-357)||(49906143-49906212)
chr4 (286-324)||(54803362-54803400)
chr4 (287-320)||(4949272-4949305)
chr4 (287-324)||(9776366-9776403)
chr4 (287-344)||(28899218-28899275)
chr4 (287-324)||(36488358-36488395)
chr4 (286-364)||(37022271-37022351)
chr4 (290-359)||(40983160-40983229)
chr4 (290-359)||(48326555-48326624)
chr4 (286-315)||(50890116-50890145)
chr4 (286-359)||(54036517-54036590)
chr4 (311-359)||(1688416-1688464)
chr4 (311-359)||(4878002-4878050)
chr4 (288-344)||(5386385-5386441)
chr4 (285-313)||(9472558-9472586)
chr4 (317-357)||(18880826-18880866)
chr4 (311-359)||(18944314-18944362)
chr4 (285-329)||(22007831-22007875)
chr4 (311-359)||(22893903-22893951)
chr4 (311-359)||(22945571-22945619)
chr4 (311-359)||(34537965-34538013)
chr4 (285-313)||(35017151-35017179)
chr4 (287-359)||(36413314-36413386)
chr4 (285-313)||(40629385-40629413)
chr4 (286-322)||(41849690-41849726)
chr4 (286-314)||(42853938-42853966)
chr4 (286-314)||(44272854-44272882)
chr4 (311-359)||(45521567-45521615)
chr4 (284-320)||(46355331-46355367)
chr4 (285-313)||(47014937-47014965)
chr4 (285-317)||(48650297-48650329)
chr4 (311-359)||(53763799-53763847)
chr4 (285-313)||(53781881-53781909)
chr4 (309-353)||(54801481-54801525)
[»] chr7 (65 HSPs)
chr7 (287-365)||(33465021-33465099)
chr7 (285-359)||(49142505-49142579)
chr7 (287-359)||(25272602-25272674)
chr7 (287-359)||(27866525-27866597)
chr7 (285-359)||(24380709-24380783)
chr7 (286-359)||(40108134-40108207)
chr7 (287-359)||(37848608-37848680)
chr7 (290-360)||(29923685-29923755)
chr7 (286-359)||(6822521-6822594)
chr7 (286-359)||(30391158-30391231)
chr7 (288-359)||(38547278-38547349)
chr7 (309-359)||(17039190-17039240)
chr7 (286-359)||(43213318-43213391)
chr7 (286-347)||(43942648-43942708)
chr7 (311-364)||(48639366-48639419)
chr7 (309-357)||(1709317-1709365)
chr7 (309-361)||(41538515-41538567)
chr7 (286-360)||(5905952-5906026)
chr7 (286-364)||(21589932-21590009)
chr7 (286-364)||(23848088-23848166)
chr7 (286-320)||(27704434-27704468)
chr7 (286-324)||(41538481-41538519)
chr7 (286-359)||(2469702-2469775)
chr7 (309-362)||(28081767-28081820)
chr7 (286-359)||(37351978-37352051)
chr7 (287-320)||(40207838-40207871)
chr7 (296-364)||(10619682-10619750)
chr7 (288-324)||(17039158-17039194)
chr7 (288-324)||(23034347-23034383)
chr7 (311-359)||(41910173-41910221)
chr7 (285-345)||(45420062-45420122)
chr7 (311-359)||(47945018-47945066)
chr7 (311-359)||(47950448-47950496)
chr7 (312-359)||(22331199-22331246)
chr7 (309-364)||(35212938-35212993)
chr7 (312-359)||(41666948-41666995)
chr7 (290-324)||(640395-640429)
chr7 (286-356)||(19510348-19510418)
chr7 (317-359)||(26153686-26153728)
chr7 (286-320)||(28548259-28548293)
chr7 (309-359)||(41458888-41458938)
chr7 (285-315)||(45154582-45154612)
chr7 (286-320)||(48522155-48522189)
chr7 (286-347)||(3937121-3937182)
chr7 (287-324)||(7295450-7295487)
chr7 (287-352)||(8459614-8459679)
chr7 (286-355)||(22330623-22330692)
chr7 (286-319)||(23389632-23389665)
chr7 (286-359)||(26041320-26041393)
chr7 (286-359)||(27778078-27778151)
chr7 (287-360)||(34264594-34264667)
chr7 (286-359)||(37856153-37856226)
chr7 (285-359)||(38197666-38197744)
chr7 (314-364)||(39415456-39415508)
chr7 (285-314)||(40693572-40693601)
chr7 (287-324)||(42598242-42598279)
chr7 (311-359)||(11070263-11070311)
chr7 (285-337)||(27570353-27570405)
chr7 (311-359)||(28548209-28548257)
chr7 (288-320)||(34349065-34349097)
chr7 (287-359)||(37832450-37832522)
chr7 (311-359)||(37969966-37970014)
chr7 (311-359)||(41030318-41030366)
chr7 (312-360)||(44185214-44185262)
chr7 (288-324)||(44564757-44564792)
[»] chr2 (84 HSPs)
chr2 (285-359)||(22296117-22296191)
chr2 (286-359)||(6885468-6885541)
chr2 (286-359)||(40115525-40115598)
chr2 (287-359)||(27538904-27538976)
chr2 (287-359)||(45202120-45202192)
chr2 (288-359)||(24491665-24491738)
chr2 (290-359)||(38598337-38598406)
chr2 (287-359)||(8757555-8757627)
chr2 (286-359)||(43205106-43205176)
chr2 (286-360)||(13881105-13881179)
chr2 (286-360)||(14021230-14021304)
chr2 (290-355)||(11828812-11828877)
chr2 (286-359)||(38724306-38724379)
chr2 (288-357)||(38777903-38777972)
chr2 (287-359)||(305957-306029)
chr2 (287-355)||(24727426-24727494)
chr2 (285-359)||(35008089-35008160)
chr2 (285-359)||(15141471-15141545)
chr2 (287-359)||(23141367-23141436)
chr2 (287-359)||(23553157-23553226)
chr2 (289-355)||(43076312-43076378)
chr2 (311-364)||(17999781-17999834)
chr2 (286-359)||(1096331-1096401)
chr2 (309-360)||(9384408-9384459)
chr2 (312-359)||(19523389-19523436)
chr2 (309-359)||(3366062-3366112)
chr2 (285-347)||(9647142-9647203)
chr2 (286-360)||(42607517-42607591)
chr2 (286-359)||(694279-694352)
chr2 (286-364)||(4263845-4263924)
chr2 (287-355)||(7428433-7428508)
chr2 (286-359)||(27329097-27329170)
chr2 (311-359)||(4723601-4723649)
chr2 (285-337)||(10550469-10550521)
chr2 (311-359)||(12256936-12256984)
chr2 (319-359)||(16051405-16051445)
chr2 (285-359)||(16463302-16463373)
chr2 (311-359)||(27529564-27529612)
chr2 (290-357)||(28264541-28264609)
chr2 (287-359)||(43725216-43725288)
chr2 (317-364)||(5167723-5167770)
chr2 (312-359)||(35798245-35798292)
chr2 (286-344)||(4138188-4138246)
chr2 (317-359)||(5455441-5455483)
chr2 (286-320)||(12208441-12208475)
chr2 (286-324)||(18531600-18531638)
chr2 (286-320)||(30339992-30340026)
chr2 (317-359)||(34372888-34372930)
chr2 (309-359)||(34373038-34373088)
chr2 (309-359)||(37827773-37827823)
chr2 (286-344)||(40700206-40700264)
chr2 (317-359)||(41868357-41868399)
chr2 (287-325)||(44897626-44897664)
chr2 (287-320)||(5852474-5852507)
chr2 (286-343)||(10711735-10711792)
chr2 (322-359)||(11126510-11126547)
chr2 (287-324)||(18749397-18749434)
chr2 (286-359)||(28013966-28014039)
chr2 (285-314)||(28494857-28494886)
chr2 (286-355)||(29795446-29795515)
chr2 (287-324)||(35705950-35705987)
chr2 (287-324)||(38021356-38021393)
chr2 (311-360)||(42554811-42554860)
chr2 (286-330)||(305000-305044)
chr2 (285-313)||(4319767-4319795)
chr2 (286-314)||(8352834-8352862)
chr2 (285-313)||(10288148-10288176)
chr2 (309-357)||(13850174-13850222)
chr2 (285-313)||(14891123-14891151)
chr2 (323-359)||(16051376-16051412)
chr2 (288-324)||(17159567-17159603)
chr2 (323-359)||(18508125-18508161)
chr2 (311-359)||(19637264-19637312)
chr2 (311-359)||(19835857-19835905)
chr2 (311-359)||(20247855-20247903)
chr2 (285-313)||(23045091-23045119)
chr2 (287-359)||(25801801-25801873)
chr2 (285-325)||(26387892-26387932)
chr2 (311-359)||(28679163-28679211)
chr2 (274-306)||(36383449-36383481)
chr2 (311-359)||(38027603-38027651)
chr2 (287-351)||(38600825-38600889)
chr2 (311-359)||(40721806-40721854)
chr2 (312-359)||(41156991-41157036)
[»] chr8 (62 HSPs)
chr8 (286-359)||(14233632-14233705)
chr8 (286-359)||(13924021-13924094)
chr8 (287-364)||(32777896-32777973)
chr8 (287-360)||(41776186-41776259)
chr8 (287-359)||(6243045-6243117)
chr8 (286-359)||(25430656-25430729)
chr8 (287-359)||(37471654-37471726)
chr8 (287-357)||(23265344-23265414)
chr8 (286-360)||(43590704-43590778)
chr8 (286-355)||(38939181-38939250)
chr8 (290-357)||(42768112-42768179)
chr8 (287-359)||(38174221-38174294)
chr8 (287-359)||(36675336-36675408)
chr8 (285-359)||(37294605-37294677)
chr8 (285-360)||(45405806-45405881)
chr8 (289-359)||(8233484-8233554)
chr8 (286-351)||(37392124-37392189)
chr8 (287-360)||(45081398-45081471)
chr8 (311-359)||(4148643-4148691)
chr8 (311-359)||(22836127-22836175)
chr8 (311-359)||(34838258-34838306)
chr8 (287-357)||(35345953-35346023)
chr8 (313-359)||(43605641-43605687)
chr8 (285-337)||(7010683-7010735)
chr8 (286-353)||(9963695-9963763)
chr8 (311-359)||(27300381-27300429)
chr8 (288-344)||(32020468-32020524)
chr8 (317-364)||(22767173-22767220)
chr8 (285-320)||(34578415-34578450)
chr8 (290-365)||(42658648-42658723)
chr8 (287-317)||(1646256-1646286)
chr8 (290-324)||(3893432-3893466)
chr8 (285-359)||(5502369-5502443)
chr8 (317-359)||(9550395-9550437)
chr8 (290-360)||(11138910-11138980)
chr8 (309-359)||(20995046-20995096)
chr8 (286-320)||(22203253-22203287)
chr8 (286-324)||(28156202-28156240)
chr8 (309-359)||(32234440-32234490)
chr8 (317-359)||(34473990-34474032)
chr8 (286-320)||(35701865-35701899)
chr8 (317-359)||(42716361-42716403)
chr8 (286-336)||(43419878-43419928)
chr8 (286-359)||(7325725-7325798)
chr8 (287-320)||(21649206-21649239)
chr8 (287-320)||(27300346-27300379)
chr8 (286-343)||(39884492-39884549)
chr8 (286-359)||(40413337-40413410)
chr8 (311-360)||(40459749-40459798)
chr8 (288-355)||(3394719-3394787)
chr8 (317-357)||(7279916-7279956)
chr8 (323-359)||(9985666-9985702)
chr8 (311-359)||(14228742-14228790)
chr8 (311-359)||(18550014-18550062)
chr8 (311-359)||(22203203-22203251)
chr8 (285-317)||(23708974-23709006)
chr8 (311-359)||(23709011-23709059)
chr8 (287-355)||(30462714-30462782)
chr8 (287-359)||(34247783-34247855)
chr8 (319-359)||(34494626-34494666)
chr8 (311-359)||(37784362-37784410)
chr8 (311-359)||(42688462-42688510)
[»] chr3 (68 HSPs)
chr3 (286-359)||(35368621-35368694)
chr3 (287-359)||(29057659-29057731)
chr3 (286-364)||(49361818-49361896)
chr3 (286-359)||(50745559-50745632)
chr3 (286-357)||(29846881-29846952)
chr3 (285-359)||(48490501-48490575)
chr3 (287-355)||(43149335-43149403)
chr3 (287-359)||(47484290-47484363)
chr3 (286-359)||(21481777-21481847)
chr3 (286-357)||(43220131-43220202)
chr3 (287-361)||(3484770-3484844)
chr3 (309-359)||(48205078-48205128)
chr3 (286-347)||(48117346-48117407)
chr3 (287-359)||(2935499-2935568)
chr3 (317-359)||(8627898-8627940)
chr3 (286-324)||(9159070-9159108)
chr3 (285-359)||(11404948-11405022)
chr3 (317-359)||(51032612-51032654)
chr3 (311-360)||(9027648-9027697)
chr3 (286-359)||(23906975-23907048)
chr3 (287-344)||(26548777-26548834)
chr3 (286-359)||(43169741-43169814)
chr3 (286-359)||(44937218-44937291)
chr3 (311-359)||(1402685-1402733)
chr3 (309-353)||(7351632-7351676)
chr3 (309-353)||(9159030-9159074)
chr3 (311-359)||(17118432-17118480)
chr3 (311-359)||(29525268-29525316)
chr3 (311-359)||(30664538-30664586)
chr3 (311-359)||(38471677-38471725)
chr3 (285-337)||(38957522-38957573)
chr3 (311-359)||(44689838-44689886)
chr3 (288-359)||(51487760-51487829)
chr3 (286-322)||(53021188-53021224)
chr3 (285-324)||(7351672-7351711)
chr3 (285-324)||(34145572-34145611)
chr3 (288-359)||(43883314-43883385)
chr3 (285-360)||(50876349-50876424)
chr3 (309-359)||(1834539-1834589)
chr3 (309-359)||(9557910-9557960)
chr3 (311-361)||(29555824-29555874)
chr3 (317-359)||(31017382-31017424)
chr3 (317-359)||(32008074-32008116)
chr3 (311-353)||(33971918-33971960)
chr3 (317-359)||(41309041-41309083)
chr3 (287-359)||(44826967-44827036)
chr3 (286-344)||(46952948-46953006)
chr3 (285-351)||(47683799-47683865)
chr3 (285-347)||(50318383-50318444)
chr3 (285-342)||(54007473-54007530)
chr3 (286-344)||(55361236-55361294)
chr3 (287-344)||(9719455-9719512)
chr3 (311-360)||(14839032-14839081)
chr3 (287-320)||(14839083-14839116)
chr3 (287-344)||(23868981-23869038)
chr3 (286-359)||(36318270-36318343)
chr3 (287-336)||(45205288-45205337)
chr3 (287-315)||(6178468-6178496)
chr3 (319-359)||(13724398-13724438)
chr3 (311-359)||(14847506-14847554)
chr3 (287-359)||(32687948-32688020)
chr3 (288-356)||(35554106-35554174)
chr3 (286-314)||(36799397-36799425)
chr3 (323-359)||(37585478-37585514)
chr3 (311-359)||(42888760-42888808)
chr3 (288-320)||(44689793-44689825)
chr3 (286-314)||(45528986-45529014)
chr3 (286-314)||(50559256-50559284)
[»] scaffold0286 (2 HSPs)
scaffold0286 (286-359)||(17048-17121)
scaffold0286 (287-359)||(18635-18707)
[»] chr6 (25 HSPs)
chr6 (286-359)||(2165288-2165361)
chr6 (286-359)||(2176921-2176994)
chr6 (287-359)||(9395325-9395397)
chr6 (286-359)||(17442832-17442905)
chr6 (287-359)||(16121163-16121235)
chr6 (286-359)||(25567478-25567551)
chr6 (287-356)||(32135422-32135491)
chr6 (287-359)||(22422164-22422233)
chr6 (286-359)||(25561928-25562001)
chr6 (286-359)||(26101442-26101515)
chr6 (287-360)||(32644623-32644696)
chr6 (286-359)||(1196057-1196130)
chr6 (286-359)||(31517168-31517241)
chr6 (288-350)||(16865565-16865627)
chr6 (317-359)||(21506377-21506419)
chr6 (290-336)||(31413539-31413585)
chr6 (287-359)||(2163702-2163774)
chr6 (287-359)||(2175335-2175407)
chr6 (286-359)||(3179991-3180064)
chr6 (287-324)||(6997584-6997621)
chr6 (285-314)||(20712065-20712094)
chr6 (287-320)||(27790273-27790306)
chr6 (311-359)||(12151845-12151893)
chr6 (287-351)||(12177577-12177641)
chr6 (284-324)||(30622021-30622061)
[»] chr5 (53 HSPs)
chr5 (286-359)||(12203157-12203230)
chr5 (285-359)||(40201108-40201182)
chr5 (286-357)||(38919862-38919931)
chr5 (292-359)||(7080546-7080613)
chr5 (285-359)||(43153048-43153122)
chr5 (287-359)||(8442170-8442242)
chr5 (286-357)||(11878439-11878510)
chr5 (286-359)||(4434481-4434554)
chr5 (286-359)||(9957189-9957262)
chr5 (286-359)||(14206399-14206472)
chr5 (285-359)||(8725410-8725484)
chr5 (309-359)||(20985517-20985567)
chr5 (309-359)||(34693204-34693254)
chr5 (285-359)||(39458666-39458740)
chr5 (288-357)||(33910078-33910147)
chr5 (287-359)||(16202731-16202803)
chr5 (287-330)||(38387610-38387653)
chr5 (312-359)||(42364465-42364512)
chr5 (286-360)||(13734347-13734421)
chr5 (309-359)||(22653688-22653738)
chr5 (286-359)||(32732107-32732179)
chr5 (286-360)||(9940069-9940140)
chr5 (291-359)||(29227721-29227789)
chr5 (311-359)||(36899469-36899517)
chr5 (317-364)||(582850-582897)
chr5 (285-320)||(25585494-25585529)
chr5 (285-324)||(41192585-41192624)
chr5 (311-357)||(2863585-2863630)
chr5 (286-320)||(3031833-3031867)
chr5 (311-357)||(3031869-3031915)
chr5 (286-324)||(5996666-5996704)
chr5 (286-320)||(14523002-14523036)
chr5 (287-359)||(15531949-15532023)
chr5 (286-320)||(18729327-18729361)
chr5 (286-324)||(20985563-20985601)
chr5 (317-359)||(27340910-27340952)
chr5 (309-359)||(30103439-30103489)
chr5 (286-320)||(39032642-39032676)
chr5 (295-360)||(6458787-6458852)
chr5 (286-335)||(24486895-24486944)
chr5 (287-320)||(31748336-31748369)
chr5 (290-359)||(33567211-33567280)
chr5 (286-359)||(35595974-35596046)
chr5 (311-359)||(4820190-4820238)
chr5 (311-359)||(12891084-12891132)
chr5 (311-355)||(14522956-14523000)
chr5 (311-359)||(18729277-18729325)
chr5 (286-314)||(19844353-19844381)
chr5 (286-314)||(29803224-29803252)
chr5 (286-314)||(34428159-34428187)
chr5 (286-314)||(35165678-35165706)
chr5 (311-359)||(37821113-37821161)
chr5 (311-359)||(39032592-39032640)
[»] chr1 (73 HSPs)
chr1 (286-359)||(11121491-11121564)
chr1 (288-359)||(50460700-50460771)
chr1 (286-359)||(30414874-30414947)
chr1 (287-359)||(35030750-35030822)
chr1 (287-355)||(16252751-16252819)
chr1 (287-359)||(29094734-29094803)
chr1 (309-359)||(40118703-40118753)
chr1 (287-359)||(48689570-48689639)
chr1 (286-359)||(46903480-46903553)
chr1 (287-359)||(48256920-48256990)
chr1 (285-324)||(22674710-22674749)
chr1 (287-357)||(644701-644771)
chr1 (286-360)||(3826802-3826876)
chr1 (283-359)||(12972692-12972765)
chr1 (285-359)||(43757597-43757671)
chr1 (295-360)||(33111898-33111963)
chr1 (286-359)||(40596042-40596115)
chr1 (286-359)||(45272148-45272221)
chr1 (286-359)||(48325766-48325839)
chr1 (287-359)||(40139126-40139198)
chr1 (312-359)||(37947208-37947255)
chr1 (286-324)||(1100216-1100254)
chr1 (309-359)||(3919333-3919383)
chr1 (287-364)||(30196724-30196802)
chr1 (309-359)||(43105138-43105188)
chr1 (286-364)||(43612063-43612141)
chr1 (286-359)||(27687507-27687580)
chr1 (288-333)||(51080104-51080148)
chr1 (290-354)||(4618658-4618722)
chr1 (311-359)||(5574247-5574295)
chr1 (286-354)||(21446211-21446279)
chr1 (287-359)||(37690429-37690501)
chr1 (287-351)||(41507190-41507254)
chr1 (287-359)||(47059878-47059950)
chr1 (311-359)||(48962021-48962069)
chr1 (312-359)||(29638751-29638798)
chr1 (317-364)||(34157560-34157607)
chr1 (285-320)||(41564918-41564953)
chr1 (288-359)||(51571416-51571487)
chr1 (317-359)||(1788332-1788374)
chr1 (309-359)||(2827698-2827748)
chr1 (311-357)||(2854950-2854996)
chr1 (285-359)||(5975546-5975620)
chr1 (317-359)||(8464501-8464543)
chr1 (284-314)||(8905725-8905755)
chr1 (287-325)||(12990502-12990540)
chr1 (317-359)||(15061886-15061928)
chr1 (286-344)||(19427520-19427578)
chr1 (309-359)||(22674745-22674795)
chr1 (317-359)||(28253056-28253098)
chr1 (287-325)||(41425242-41425280)
chr1 (317-355)||(44672022-44672060)
chr1 (311-357)||(48390067-48390113)
chr1 (309-354)||(1100250-1100295)
chr1 (323-360)||(12990456-12990493)
chr1 (287-324)||(22331366-22331403)
chr1 (287-320)||(23472108-23472141)
chr1 (287-324)||(26760562-26760599)
chr1 (317-358)||(32196679-32196720)
chr1 (310-359)||(41885755-41885804)
chr1 (287-324)||(43105105-43105142)
chr1 (286-359)||(49453490-49453563)
chr1 (287-320)||(50796002-50796035)
chr1 (287-347)||(51718626-51718687)
chr1 (285-313)||(1689389-1689417)
chr1 (287-359)||(8391326-8391398)
chr1 (285-317)||(8577543-8577575)
chr1 (311-359)||(11897209-11897257)
chr1 (311-359)||(23399977-23400025)
chr1 (311-359)||(32873376-32873424)
chr1 (311-359)||(39815381-39815429)
chr1 (312-360)||(40240098-40240146)
chr1 (311-359)||(51727988-51728036)
[»] scaffold0054 (1 HSPs)
scaffold0054 (286-359)||(31588-31661)
[»] scaffold0514 (1 HSPs)
scaffold0514 (311-361)||(1831-1881)
[»] scaffold0172 (1 HSPs)
scaffold0172 (289-330)||(9296-9337)
[»] scaffold0024 (1 HSPs)
scaffold0024 (309-359)||(48687-48737)
[»] scaffold0072 (1 HSPs)
scaffold0072 (286-359)||(14539-14612)
[»] scaffold0651 (1 HSPs)
scaffold0651 (284-324)||(4880-4920)
[»] scaffold0058 (1 HSPs)
scaffold0058 (311-359)||(2978-3026)
[»] scaffold0014 (2 HSPs)
scaffold0014 (285-320)||(145059-145094)
scaffold0014 (311-359)||(145096-145144)
[»] scaffold0662 (1 HSPs)
scaffold0662 (285-313)||(1076-1104)
[»] scaffold0504 (1 HSPs)
scaffold0504 (288-336)||(11159-11207)


Alignment Details
Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 190 - 286
Target Start/End: Complemental strand, 46484747 - 46484656
Alignment:
Q  190 gtgtatgcattactatttggtgacttattttgagatcaatctaatctttatctttaaatatttccgtatttattgaacttttacctcattattgcta 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||| |||| |||||||||||    
T  46484747 gtgtatgcattactatttggtgacttattttgagatcaatctaatctttatctttaaatatttccgt-----ttgaacttgtaccacattattgcta 46484656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 36871228 - 36871159
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctc 356  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  36871228 gagaaatgatatttgtacaactatttttgtacaactttctctcttatattcgcattatcttcttattctc 36871159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 9095949 - 9096020
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgtacaattttctctctcatactcacattatcttcttattctctct 9096020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 1868954 - 1868881
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||| |||||| ||||||||||||||| |||||    
T  1868954 agagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcacattatcttcttattttctct 1868881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 31413847 - 31413778
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||| |||||    
T  31413847 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactgacattatcttctaattct 31413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 7795025 - 7795097
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||| ||| |||||  |||||||||||||||||||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatacttacattatcttcttattctctct 7795097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 24310581 - 24310509
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||| |||| |||||||||| |||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattttcttcttattttctct 24310509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 54848150 - 54848226
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||||||||| ||||||||||||  |||||||| ||| || |||||| |||||||||||||||||||    
T  54848150 agaaatgatatttgtacaaccatttttgtacaaccttctctctcatattcacattattttcttattctctcttcctt 54848226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 46792050 - 46791979
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||| |||| |||||||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  46792050 agaaatgatatttgtgcaacaatttttgtacaattttctttctcatactcacattatcttcttattatctct 46791979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 21766557 - 21766630
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| ||  ||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  21766557 agagaaatgatatttgtataatcatttttgtacaaccttctctctcatactcacattatcttcttattctctct 21766630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 45678273 - 45678346
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| |||||||||||  |||||||||||||||| ||||| |||| | |||||||||||||||||||||    
T  45678273 agagaaatgttatttgtacaatcatttttgtacaattttatctctcatacccacattatcttcttattctctct 45678346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 8848711 - 8848779
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||||||||| | |||| ||||||||||||||| | |||| |||||||||||||||||    
T  8848711 gagaaatgatatttgtacaacaaattttatacaattttctctcttacactcacattatcttcttattct 8848779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 363
Target Start/End: Original strand, 37731926 - 37732002
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcct 363  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||| |||||| |||||| || |||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcacattatgtttttattctctcttcct 37732002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 9828045 - 9827971
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||| | |||| |||||| || |||||||||||    
T  9828045 tagagaaatgatatttgtacaaccattttagtacaactttctctctcacactcacattatgtttttattctctct 9827971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 284 - 359
Target Start/End: Complemental strand, 32294820 - 32294748
Alignment:
Q  284 ctagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| ||||   |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  32294820 ctagagaaatgatatttgtataact---tttgtacaaccttctctctcatactcacattatcttcttattctctct 32294748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 364
Target Start/End: Complemental strand, 39241361 - 39241284
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||||||||||||| | |||   |||| ||||||||| |||||| ||||||| ||||||||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactcacattatcctcttattctctcttcctt 39241284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 359
Target Start/End: Original strand, 46799779 - 46799839
Alignment:
Q  299 ttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  46799779 ttgtacaaccatttttgtacaaccttctctctcatactcacattatcttcttattctctct 46799839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 41010231 - 41010156
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||| |||||  |||||||||||||| | ||||| |||||| |||||| |||||||||| ||||    
T  41010231 tagagaaatgatatttatacaatcatttttgtacaattctttctcttatactcacattattttcttattctttctt 41010156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 4577590 - 4577640
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  4577590 atttttgtacaactttctctctcatactcacattatcttcttattctctct 4577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 8614190 - 8614259
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||   |||||||||  |||||||| |||||| |||||| ||||||||||||||    
T  8614190 gagaaatgatatttgtacaact---tttgtacaaccttctctctcatactcacattattttcttattctctct 8614259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 29577508 - 29577470
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29577508 agagaaatgatatttgtacaactatttttgtacaatttt 29577470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 4511824 - 4511897
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| ||| |||||   |||| ||||||||| |||||| |||||| ||||||||||||||    
T  4511824 agagaaatgatatttgtataaccattttatgacaactttctctctcatactcacattatattcttattctctct 4511897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 27384186 - 27384259
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||  ||||| ||||||||| ||| ||  ||||| ||||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcatattcatattatattcttattctctct 27384259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 36110134 - 36110171
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36110134 gagaaatgatatttgtacaactatttttgtacaatttt 36110171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 46686244 - 46686312
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||||||||||| | |||||||||| ||||||||| |||||| |||||| || |||||||    
T  46686244 agagaaatgatatttgtacaacca-ttttgtacaactttctctctcatactcacattatgtttttattct 46686312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 1580342 - 1580271
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||  ||| || |||||||||||||| |||||| ||||||| ||||||| |||||    
T  1580342 gagaaatgatatttgtacaacactttgtg-acaattttctctctcatactcacattatcctcttattatctct 1580271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 15515795 - 15515874
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttat--tctctcttcctt 364  Q
    ||||||||||||| |||||||||||||   |||| ||||||||| |||||| |||||||||||| |  ||||||||||||    
T  15515795 gagaaatgatattggtacaactattttatgacaactttctctctcatactcacattatcttcttttcatctctcttcctt 15515874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 55960735 - 55960783
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||    
T  55960735 ttttgtacaattttctctctcatactcgcattatgtttttattctctct 55960783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 43864032 - 43864071
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  43864032 tagagaaatgatatttgtacaactattttggtacaatttt 43864071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 48791670 - 48791631
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  48791670 tagagaaatgatatttgtacaactatttttgtataatttt 48791631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 6126886 - 6126936
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  6126886 atttttgtacaacattctctctcatactcacattatcttcttattctctct 6126936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 7161586 - 7161513
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||| ||| || ||||||  |||||||||||||    
T  7161586 tagaaaaatgatatttgtacaa-tatttttttacaactttctctctcatattcacattatactcttattctctct 7161513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 9162107 - 9162149
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  9162107 acaattttctctctaatactcgcattattctcttattctctct 9162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 29577474 - 29577424
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  29577474 atttttgtacaactttctttctcatactcacattatcttcttattctctct 29577424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 33776907 - 33776984
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| | ||| || |||||||||  |||| ||||||||||    
T  33776907 agagaaatgatatttgtacaa-tatttttgtacaactttatctttcatattcacattatctttatattatctcttcctt 33776984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 46173549 - 46173627
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||||||||||| | |||   |||| |||||||||  ||||| ||||||  ||||||||||||||||||    
T  46173549 agagaaatgatatttgtacaaccactttgtgacaactttctctctcgtactcacattattctcttattctctcttcctt 46173627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 54803366 - 54803316
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| ||||||||||||||    
T  54803366 atttttgtacaactttctctctcatactcacattatgttcttattctctct 54803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 55996463 - 55996505
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  55996463 acaattttctctctcatactcacattatcttcttattctctct 55996505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 1728148 - 1728075
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||| ||||| ||  |||||||||  |||||| | |||||  |||||||||||||||||||||    
T  1728148 agagaaatgatatttttacaattaaatttgtacaaccttctctttcatacttacattatcttcttattctctct 1728075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 42169785 - 42169712
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgta-caattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| ||||||||| | |||| || ||||||| ||||| |||||| ||||||| |||||||||||||    
T  42169785 gagaaatgatagttgtacaaccacttttataacaattttatctctcatactcacattatcctcttattctctct 42169712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 43511718 - 43511685
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||||||||||||||    
T  43511718 gagaaatgatatttgtacaactatttttgtacaa 43511685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 48650292 - 48650243
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  48650292 ttttgtacaactttctctctcatactcatattatcttcttattctctctt 48650243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 4974111 - 4974159
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatac 335  Q
    ||||||||||||||||||||||||||||  |||| ||||||||| ||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatac 4974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 8485575 - 8485607
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgta 317  Q
    |||||||||||||||||||||||||||||||||    
T  8485575 tagagaaatgatatttgtacaactatttttgta 8485607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 31318750 - 31318790
Alignment:
Q  284 ctagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  31318750 ctagagaaatgatatttgtacaaccattttggtacaatttt 31318790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 36364821 - 36364773
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  36364821 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 36364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 38960730 - 38960694
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38960730 agaaatgatatttgtacaaccatttttgtacaatttt 38960694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 39605977 - 39606044
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttatt 353  Q
    |||||||||||||| || ||||| ||||||| |||| ||||||||| |||||| ||||||||| |||||    
T  39605977 tagagaaatgatatatgaacaaccatttttg-acaactttctctctcatactcacattatctttttatt 39606044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 40755964 - 40756004
Alignment:
Q  319 aattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  40755964 aattttctctctcatactcacattatcttcttattctctct 40756004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 43982905 - 43982976
Alignment:
Q  286 agagaaatgatatttgtacaact--atttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||| |||||||||   | |||| ||||||||||||||| |||||| | |||||||||||||||    
T  43982905 agagaaatgatagttgtacaacacaacttttatacaattttctctctcatactcaccttatcttcttattct 43982976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 44133544 - 44133616
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| |||||| | | |||| ||||||||| ||||| |||||| |||||| |||||| |||||||    
T  44133544 gagaaatgatatatgtacatccacttttttacaattttttctctcatactcacattatattcttaatctctct 44133616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 1987786 - 1987747
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  1987786 tagagaaatgatatttgtacaaccattttagtacaatttt 1987747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 337
Target Start/End: Original strand, 4106053 - 4106103
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  4106053 agagaaatgatatttgtacaa-tttttttttacaattttctctctcatactc 4106103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 4577555 - 4577594
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  4577555 tagagaaatgatatttgtacaaccattttcgtacaatttt 4577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 26440674 - 26440753
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||||||||||||||| | |||   |||||||| ||||  |||||| |||||| || ||| ||||||||||||    
T  26440674 tagagaaatgatatttgtacaaccactttgtgacaattttatctcccatactcacattatatttttactctctcttcctt 26440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 28676211 - 28676140
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| |||||   |||| ||||||| | |||||| |||||| |||||| |||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcacattatattcttactctctct 28676140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 36488535 - 36488492
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctct 330  Q
    |||||||||||||| || |||||||||||||||| |||||||||    
T  36488535 gagaaatgatatttatagaactatttttgtacaactttctctct 36488492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 9472543 - 9472501
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  9472543 acaactttctctctcatactcacattatcttcttattctctct 9472501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 17805493 - 17805535
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||| ||||||||||||||    
T  17805493 acaattttctctctcatactcacattattttcttattctctct 17805535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 19748648 - 19748698
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||| ||||||||| ||||||||||  | |||||||||||||||||||    
T  19748648 gagaaatcatatttgtataactattttttgataattttctctctaatactc 19748698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 19791158 - 19791108
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||| ||||||||| ||||||||||  | |||||||||||||||||||    
T  19791158 gagaaatcatatttgtataactattttttgataattttctctctaatactc 19791108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 22893868 - 22893906
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  22893868 agagaaatgatatttgtacaatcatttttgtacaatttt 22893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 22945536 - 22945574
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  22945536 agagaaatgatatttgtacaatcatttttgtacaatttt 22945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 23347816 - 23347858
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  23347816 acaattttctctctcatactcacattatcctcttattctctct 23347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 32621636 - 32621710
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||| ||||| |||||   |||| |||||||||||||||| |||| | || ||| |||||||    
T  32621636 tagagaaatgatatttgcacaaccattttgtgacaactttctctctaatactcacattctatttttactctctct 32621710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 36110167 - 36110217
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||  |||||||| ||| || |||||||||||||||||||||    
T  36110167 atttttgtacaaccttctctctcatattcacattatcttcttattctctct 36110217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 39881060 - 39881018
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  39881060 acaactttctctctcatactcacattatcttcttattctctct 39881018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 42490919 - 42490977
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||||||||||| | ||||  |||| ||||||||| |||||| ||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcacattat 42490977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 49906143 - 49906212
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||||||||||| |||| || |||||||||||||  |||||| ||||||  ||||| |||||    
T  49906143 gagaaatgatatttgtacaaccatttgtg-acaattttctctcacatactcacattatactcttaatctct 49906212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 54803400 - 54803362
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||| || |||||||    
T  54803400 agagaaatgatatttgtacaactattttggtgcaatttt 54803362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 4949305 - 4949272
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||||||| ||||||    
T  4949305 gagaaatgatatttgtacaactattttggtacaa 4949272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 9776403 - 9776366
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  9776403 gagaaatgatatttgtacaactattttttgacaatttt 9776366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 28899275 - 28899218
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||||||||||||||||  ||||| |||||| ||||||||| ||| || ||||||    
T  28899275 gagaaatgatatttgtacaatcattttggtacaactttctctctcatattcacattat 28899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 36488358 - 36488395
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  36488358 gagaaatgatatttgaacaattatttttgtacaatttt 36488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 37022271 - 37022351
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttat--tctctcttcctt 364  Q
    |||||||||||||||||||||| |||||  ||||| ||| ||||| |||||| ||| ||  ||||||  ||||||||||||    
T  37022271 agagaaatgatatttgtacaaccattttgatacaactttatctctcatactcacatgatggtcttatcatctctcttcctt 37022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 40983160 - 40983229
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||| | |||| | ||||| | |||||| |||||| || ||||| |||||    
T  40983160 aaatgatatttgtacaactattttaggacaactctctctttcatactcacattatgtttttattttctct 40983229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Original strand, 48326555 - 48326624
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| | |||   |||| ||| ||||| |||||| ||||||| |||||||||||||    
T  48326555 aaatgatatttgtacaaccactttgtgacaactttttctctcatactcacattatcatcttattctctct 48326624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 315
Target Start/End: Complemental strand, 50890145 - 50890116
Alignment:
Q  286 agagaaatgatatttgtacaactatttttg 315  Q
    ||||||||||||||||||||||||||||||    
T  50890145 agagaaatgatatttgtacaactatttttg 50890116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 54036590 - 54036517
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||| ||||| ||||||  |||||  |||||||||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcaaattattctcttattctctct 54036517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 1688464 - 1688416
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||| ||||||||| |||||| |||||| ||||||||||||||    
T  1688464 ttttttacaactttctctctcatactcacattatattcttattctctct 1688416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 4878002 - 4878050
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  4878002 ttttgtacaaccttctctctcatactcatattatcttcttattctctct 4878050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 5386385 - 5386441
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||| ||||| ||||||  |||| ||||||||| |||||| ||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcacattat 5386441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 9472586 - 9472558
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  9472586 tagagaaatgatatttgtacaactatttt 9472558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 18880826 - 18880866
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  18880826 acaattttctctctcatactcacattatattcttattctct 18880866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 18944314 - 18944362
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| ||||||||||||| |||||||    
T  18944314 ttttgtacaaccttctctctcatactcacattatcttcttactctctct 18944362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 22007831 - 22007875
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctc 329  Q
    |||||||||||||||||||||| |||||||| |||| | ||||||    
T  22007831 tagagaaatgatatttgtacaattatttttggacaactctctctc 22007875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 22893903 - 22893951
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||| ||||||| | |||||| |||||||||||||||||||||    
T  22893903 ttttttacaactttctctttcatactcacattatcttcttattctctct 22893951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 22945571 - 22945619
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||| ||||||| | |||||| |||||||||||||||||||||    
T  22945571 ttttttacaactttctctttcatactcacattatcttcttattctctct 22945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 34537965 - 34538013
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  34537965 ttttgtacaactttctctctcatactcacattatgtttttattctctct 34538013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 35017151 - 35017179
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  35017151 tagagaaatgatatttgtacaactatttt 35017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 36413386 - 36413314
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| | |||   | |||||||||||| |||||| ||||||  |||||||||||||    
T  36413386 gagaaatgatatttatacaaccactttatgataattttctctctcatactcacattatactcttattctctct 36413314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 40629413 - 40629385
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  40629413 tagagaaatgatatttgtacaactatttt 40629385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 41849690 - 41849726
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatt 322  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  41849690 agagaaatgatatttgtacaactatctttttacaatt 41849726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 42853938 - 42853966
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  42853938 agagaaatgatatttgtacaactattttt 42853966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 44272882 - 44272854
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  44272882 agagaaatgatatttgtacaactattttt 44272854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 45521615 - 45521567
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  45521615 ttttgtacaaccttctctctcatactcatattatcttcttattctctct 45521567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 46355367 - 46355331
Alignment:
Q  284 ctagagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||||| | ||||||||||    
T  46355367 ctagagaaatgatatttgtacaaccacttttgtacaa 46355331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 47014937 - 47014965
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  47014937 tagagaaatgatatttgtacaactatttt 47014965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 48650329 - 48650297
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgta 317  Q
    |||||||||| ||||||||||||||||||||||    
T  48650329 tagagaaatgttatttgtacaactatttttgta 48650297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 53763847 - 53763799
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||| |||| ||||||||| |||||| |||||| ||||||||||||||    
T  53763847 ttttggacaactttctctctcatactcccattatattcttattctctct 53763799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 53781909 - 53781881
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  53781909 tagagaaatgatatttgtacaactatttt 53781881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 54801525 - 54801481
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttatt 353  Q
    |||||||||||||||||||||| || | | |||||||||||||||    
T  54801525 atttttgtacaattttctctctcatgcacacattatcttcttatt 54801481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 33465099 - 33465021
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttccttc 365  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcacattatcttcttattctctctttcttc 33465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 49142579 - 49142505
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  49142579 tagagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcacattatcttcttattctctct 49142505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 25272602 - 25272674
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||||||  |||||| |||||||||||||||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcacattatcttcttattctctct 25272674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 27866597 - 27866525
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||| |||||| |||||||||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcacattatcttcttattctctct 27866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 24380783 - 24380709
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| |||||| ||||| ||||| ||| |||||| |||||||||||||||||||||    
T  24380783 tagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcacattatcttcttattctctct 24380709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 40108134 - 40108207
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| |||||||||| |||||| ||||| ||||||||| |||||| |||||||||||||||||||||    
T  40108134 agagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcacattatcttcttattctctct 40108207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 37848680 - 37848608
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||  |||||||||||| ||||||||| |||||   ||||||||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactaatattatcttcttattctctct 37848608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 29923685 - 29923755
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||| ||||||||||  |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  29923685 aaatgacatttgtacaatcatttttgtacaactttctctctcatactcacattatcttattattctctctt 29923755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 6822594 - 6822521
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||| ||||| |||||| |||||||||||||||||||||    
T  6822594 agagaaatgatatttgtacaaccattttctaacaactttttctctcatactcacattatcttcttattctctct 6822521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30391158 - 30391231
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| |||||||||  ||||| ||| ||||| |||||| |||||| ||||||||||||||    
T  30391158 agagaaatgatatttgtataactattttattacaactttttctcttatactcacattatattcttattctctct 30391231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 38547349 - 38547278
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||||||  |||| ||||| ||| |||||| |||||| |||||| |||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcacattatattcttactctctct 38547278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 17039190 - 17039240
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  17039190 atttttgtacaactttctctctcatactcacattatcttcttattctctct 17039240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 43213318 - 43213391
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | |||   |||||||||||||| |||||| ||||||  |||||||||||||    
T  43213318 agagaaatgatatttgtacaaccactttctaacaattttctctctcatactcacattatactcttattctctct 43213391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 43942648 - 43942708
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatctt 347  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||| |||||| |||||||||    
T  43942648 agagaaatgatatttgaacaactattttt-tacaactttctctctcatactcacattatctt 43942708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 48639419 - 48639366
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||  |||||||| |||||| ||||||||||||||||||||||||||    
T  48639419 ttttgtacaaccttctctctcatactcacattatcttcttattctctcttcctt 48639366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 357
Target Start/End: Original strand, 1709317 - 1709365
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  1709317 atttttgtacaatattctctctcatactcacattatcttcttattctct 1709365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 41538515 - 41538567
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctcttc 361  Q
    ||||||||||||  |||||||| |||||| |||||||||||||||||||||||    
T  41538515 atttttgtacaaccttctctctcatactcacattatcttcttattctctcttc 41538567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 5906026 - 5905952
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||||||  ||||| ||| || ||||||||| |||||| |||||  || ||||||||||||    
T  5906026 agagaaatgatatttgtacaatcattttggtataactttctctctcatactcacattagatttttattctctctt 5905952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 21589932 - 21590009
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||||| ||||||| ||||||||||||| ||| ||| | |||||| ||||||||| ||  ||||||||||||    
T  21589932 agagaaatgatatctgtacaattatttttgtacaactttttctttcatactcacattatcttatt-ctctctcttcctt 21590009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 23848088 - 23848166
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||||||| ||  ||||||  |||| ||||||| | ||| ||  |||||||||||||||||||||||||    
T  23848088 agagaaatgatatttgtataatcattttttaacaactttctctatcatattcatattatcttcttattctctcttcctt 23848166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 27704434 - 27704468
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||||||||||||||||    
T  27704434 agagaaatgatatttgtacaactatttttgtacaa 27704468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 41538481 - 41538519
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  41538481 agagaaatgatatttgtacaaccatttttgtacaatttt 41538519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 2469702 - 2469775
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | |||   |||| ||||||||| |||||| |||| | ||||||||||||||    
T  2469702 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattcttattctctct 2469775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 28081820 - 28081767
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctcttcc 362  Q
    |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||||    
T  28081820 atttttttacaactttctctctcatactcacattatcttgttattctctcttcc 28081767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 37352051 - 37351978
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | |||   |||| ||||||||| |||||| ||||||  |||||||||||||    
T  37352051 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattattctcttattctctct 37351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 40207871 - 40207838
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||||||||||||||    
T  40207871 gagaaatgatatttgtacaactatttttgtacaa 40207838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 10619750 - 10619682
Alignment:
Q  296 tatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    ||||||||||||  |||||  |||| ||||||||| |||||| |||||| |||||| ||||||||||||    
T  10619750 tatttgtacaacctttttttgacaactttctctctcatactcacattatattcttactctctcttcctt 10619682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 17039158 - 17039194
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||||| ||||||    
T  17039158 agaaatgatatttgtacaactatttttgtataatttt 17039194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 23034383 - 23034347
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23034383 agaaatgatatttgtacaaccatttttgtacaatttt 23034347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 41910221 - 41910173
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  41910221 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 41910173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 45420122 - 45420062
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatc 345  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||||| ||| || |||||||    
T  45420122 tagagaaatgatatttgaacaactattttttgacaactttctctctcatattcacattatc 45420062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 47945018 - 47945066
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  47945018 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 47945066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 47950448 - 47950496
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  47950448 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 47950496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 22331246 - 22331199
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  22331246 tttgtacaaccttctctctcatactcacattatcttcttattctctct 22331199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 35212993 - 35212938
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||| ||||||||| ||| || |||||| || ||||||||||||||||    
T  35212993 atttttgtacaactttctctctcatattcacattatgtttttattctctcttcctt 35212938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 41666948 - 41666995
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||| ||||| |||||| |||||||||||||||||||||    
T  41666948 tttgtacaactttatctctcatactcacattatcttcttattctctct 41666995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Original strand, 640395 - 640429
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||| ||||||||||||||||    
T  640395 aaatgatatttgtacaaccatttttgtacaatttt 640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 19510418 - 19510348
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctc 356  Q
    ||||||||||||||||||||| ||||||   |||| ||||||||| | |||| ||||||| | ||||||||    
T  19510418 agagaaatgatatttgtacaattattttctcacaactttctctcttaaactcacattatccttttattctc 19510348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 26153686 - 26153728
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||| ||||||||||||||    
T  26153686 acaattttctctctcatactcacattatattcttattctctct 26153728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 28548293 - 28548259
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||||||||| ||||||    
T  28548293 agagaaatgatatttgtacaactattttggtacaa 28548259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 41458938 - 41458888
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  41458938 atttttgtacaactttctctctcatactcacattatgtttttattctctct 41458888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 315
Target Start/End: Complemental strand, 45154612 - 45154582
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttg 315  Q
    |||||||||||||||||||||||||||||||    
T  45154612 tagagaaatgatatttgtacaactatttttg 45154582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 48522155 - 48522189
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  48522155 agagaaatgatatttgtacaaccatttttgtacaa 48522189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 347
Target Start/End: Complemental strand, 3937182 - 3937121
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatctt 347  Q
    |||||||||||||||| ||| |||||||   |||| ||||||||| |||||| |||||||||    
T  3937182 agagaaatgatatttgaacatctattttgtgacaactttctctctcatactcacattatctt 3937121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 7295450 - 7295487
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  7295450 gagaaatgatatttgtacaaccattttagtacaatttt 7295487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 8459614 - 8459679
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttat 352  Q
    ||||||||||||||||||||| | ||||  |||| ||||||||| ||||||  |||||| ||||||    
T  8459614 gagaaatgatatttgtacaaccactttttaacaactttctctctcatactcatattatcctcttat 8459679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 22330692 - 22330623
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||||||||||| | |||   |||| ||||||||| |||||| ||||||  |||||||||    
T  22330692 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattattctcttattct 22330623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Complemental strand, 23389665 - 23389632
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtaca 319  Q
    ||||||||||||||||||||||||||||| ||||    
T  23389665 agagaaatgatatttgtacaactatttttttaca 23389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 26041320 - 26041393
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||||| |||||   |||| ||||||| | |||||| ||| || ||||||||||||||    
T  26041320 agagaaatgatattcgtacaaccattttatgacaactttctctttcatactcacatgatgttcttattctctct 26041393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 27778078 - 27778151
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||| |||   |||  ||| ||||| |||||| ||||||  |||||||||||||    
T  27778078 agagaaatgatatttgtacaactactttgtgacagctttatctctgatactcacattattctcttattctctct 27778151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 34264594 - 34264667
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||| || |||||   |||| |||| |||| |||||| |||||| || ||||||||||||    
T  34264594 gagaaatgatatttgtacgaccattttgtgacaactttcgctcttatactcacattatgtttttattctctctt 34264667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 37856226 - 37856153
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||| ||||  |||||| ||||||  |||||||||||||    
T  37856226 agagaaatgatatttgtacaaccattttgtgacaactttatctcacatactcacattatactcttattctctct 37856153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 38197666 - 38197744
Alignment:
Q  285 tagagaaatgatatttgtacaact----atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||||||||||||     |||||||||||| ||||||| | |||||| ||||||||| | |||||||||    
T  38197666 tagaaaaatgatatttgtacaacgtacaatttttgtacaactttctctttcatactcacattatcttttcattctctct 38197744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 39415456 - 39415508
Alignment:
Q  314 tgtacaattttctctctaatactcgcattatcttcttattc--tctcttcctt 364  Q
    ||||||| ||||||||| |||||| ||||||||||||||||  ||||||||||    
T  39415456 tgtacaactttctctctcatactcacattatcttcttattccatctcttcctt 39415508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 314
Target Start/End: Complemental strand, 40693601 - 40693572
Alignment:
Q  285 tagagaaatgatatttgtacaactattttt 314  Q
    ||||||||||||||||||||||||||||||    
T  40693601 tagagaaatgatatttgtacaactattttt 40693572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 42598279 - 42598242
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  42598279 gagaaatgatatttgtacaactattttttaacaatttt 42598242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 11070263 - 11070311
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||| | |||||| |||||| ||||||||||||||    
T  11070263 ttttgtacaactttctctatcatactcacattatgttcttattctctct 11070311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 27570353 - 27570405
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||||||||||||| ||||||||||||  | || ||||||||| ||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcatactc 27570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 28548257 - 28548209
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  28548257 ttttgtacaactttctctctcatactcacattatgtttttattctctct 28548209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 320
Target Start/End: Complemental strand, 34349097 - 34349065
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||| ||||||||||||    
T  34349097 agaaatgatatttgtacaaccatttttgtacaa 34349065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 37832450 - 37832522
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||||||   |||| | | ||||| |||||| |||| | |||||||| |||||    
T  37832450 gagaaatgatatttgtacaactattttgtgacaactctttctctcatactcacattgtgttcttattttctct 37832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 37969966 - 37970014
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  37969966 ttttgtacaactttctctctcatactcacattatgtttttattctctct 37970014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 41030318 - 41030366
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| | |||| |||||||||||||||||||||    
T  41030318 ttttgtacaaccttctctctcacactcacattatcttcttattctctct 41030366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 44185214 - 44185262
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||| ||||||||| |||  ||||||||||||||||| ||||||    
T  44185214 tttgtacaactttctctctcatatccgcattatcttcttattttctctt 44185262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Complemental strand, 44564792 - 44564757
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||| ||||||||    
T  44564792 agaaatgatatttgtacaactatttttg-acaatttt 44564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 84)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 22296191 - 22296117
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  22296191 tagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcacattatcttcttattctctct 22296117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 6885541 - 6885468
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  6885541 agagaaatgatttttgtacaactatttttatacaattttctctctcatactcacattatcttcttattctctct 6885468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 40115525 - 40115598
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||||||    
T  40115525 agagaaatgatatttgtacaactatttttgtataattttctctctcatactaacattatcttcttattctctct 40115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 27538976 - 27538904
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||||| | |||||| |||||||||||||||||||||    
T  27538976 gagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcacattatcttcttattctctct 27538904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 45202192 - 45202120
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||| ||| || |||||||||||||||||||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcacattatcttcttattctctct 45202120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 24491738 - 24491665
Alignment:
Q  288 agaaatgatatttgtacaacta--tttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| |  |||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  24491738 agaaatgatatttgtacaaccaattttttgtacaattttctctctcgtactcacattatcttcttattctctct 24491665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 38598406 - 38598337
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||| ||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  38598406 aaatgatatttgtataaccatttttgtacaaccttctctctcatactcacattatcttcttattctctct 38598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 8757555 - 8757627
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||||||||| |||||| ||||| ||| ||||| |||||| |||||||||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcacattatcttcttattctctct 8757627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 43205106 - 43205176
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||   |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  43205106 agagaaatgatatttgtacaact---tttgtacaacattctctctcatactcacattatcttcttattctctct 43205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 13881105 - 13881179
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||| |||||||||  |||||||||||| ||| ||| | |||||| ||||||||||||||||||||||    
T  13881105 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcacattatcttcttattctctctt 13881179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 14021230 - 14021304
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||| |||||||||  |||||||||||| ||| ||| | |||||| ||||||||||||||||||||||    
T  14021230 agagaaatgatgtttgtacaatcatttttgtacaactttatctttcatactcacattatcttcttattctctctt 14021304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 355
Target Start/End: Complemental strand, 11828877 - 11828812
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||| || | |||||||||||||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcacgttatcttcttattct 11828812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 38724379 - 38724306
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||| | |||| |||||| || |||||||||||    
T  38724379 agagaaatgatatttgtacaaccattttagtataattttctctctcacactcacattatgtttttattctctct 38724306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 38777903 - 38777972
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||| |||||||||||||  |||||| ||||||||||||||| ||| || |||||||||||||||||||    
T  38777903 agaaaggatatttgtacaatcatttttatacaattttctctctcatattcacattatcttcttattctct 38777972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 306029 - 305957
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||||| || ||| ||||| ||||||  ||||||||||||||||||||    
T  306029 gagaaatgatatttttacaaccatttttgtataactttttctctcatactcatattatcttcttattctctct 305957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 24727426 - 24727494
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||| |||||| |||||| || |||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcacattatgtttttattct 24727494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 35008160 - 35008089
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||||   ||||||||||||| | ||| |||||| ||||||||| |||||||||||    
T  35008160 tagagaaatgatatttgtacaact---tttgtacaattttatttctcatactcacattatctttttattctctct 35008089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 15141471 - 15141545
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||   |||| ||||||||| |||||| ||||||  |||||||||||||    
T  15141471 tagagaaatgatatttgtacatctattttatgacaactttctctctcatactcacattatactcttattctctct 15141545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 23141367 - 23141436
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||   ||||||||||| | ||||||| |||||| |||||||||| ||||||||||    
T  23141367 gagaaatgatatttgtacaa---tttttgtacaactgtctctctcatactcacattatcttcatattctctct 23141436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 23553157 - 23553226
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||   ||||||||||| | ||||||| |||||| |||||||||| ||||||||||    
T  23553157 gagaaatgatatttgtacaa---tttttgtacaactgtctctctcatactcacattatcttcatattctctct 23553226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 43076312 - 43076378
Alignment:
Q  289 gaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||| ||  |||||||||||||||||||||| ||||||  || |||||||||||||    
T  43076312 gaaatgatatttgtataatcatttttgtacaattttctctctcatactcatatcatcttcttattct 43076378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 17999781 - 17999834
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||    
T  17999781 ttttgtacaactttctctctcatactcacattatctttttattctctcttcctt 17999834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 1096401 - 1096331
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||   ||||||| |||||| ||||| |||||| |||||||||| |||| |||||    
T  1096401 agagaaatgatatttgtacaac---ttttgtataattttatctctcatactcacattatcttcctattatctct 1096331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 360
Target Start/End: Original strand, 9384408 - 9384459
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||||||||    
T  9384408 atttttgtacaactttctctctcatactcatattatcttcttattctctctt 9384459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 19523436 - 19523389
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  19523436 tttgtacaactttctctctcatactcacattatcttcttattctctct 19523389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 3366062 - 3366112
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| ||| |||||| ||||||||| |||||||||||    
T  3366062 atttttgtacaattttctttctcatactcacattatctttttattctctct 3366112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 9647142 - 9647203
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatctt 347  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||||| ||||||  ||||||||    
T  9647142 tagagaaatgatatttgaacaactattttt-tacaactttctctctcatactcatattatctt 9647203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 42607591 - 42607517
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||| ||||||   |||||||||||||| |||||| |||  | ||||||| |||||||    
T  42607591 agagaaatgatatttgtacaattattttgtgacaattttctctctcatactcacatgctgttcttatcctctctt 42607517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 694279 - 694352
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||  |||||||||||||| | | |   ||||| ||||||||||||||    
T  694279 agagaaatgatatttgtacaaccattttttgacaattttctctctcacatttaaattatattcttattctctct 694352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 4263924 - 4263845
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta--ttctctcttcctt 364  Q
    |||||||||||||||||||||| ||||||  |||| ||||||| | |||||| |||||| ||||||  |||||||||||||    
T  4263924 agagaaatgatatttgtacaac-attttttgacaactttctctttcatactcacattatattcttactttctctcttcctt 4263845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Original strand, 7428433 - 7428508
Alignment:
Q  287 gagaaatgatatttgtacaactatttt-------tgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||||||||||||||||       | ||||||||||||||| |||||| ||||||| |||||||||    
T  7428433 gagaaatgatatttgtacaactattttgtgattttttacaattttctctctcatactcacattatcctcttattct 7428508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 27329170 - 27329097
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||  ||||| |||||| ||||||||| ||||   |||||| || |||||||||||    
T  27329170 agagaaatgatatttgtacaatcattttggtacaactttctctctcatacctacattatgtttttattctctct 27329097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 4723601 - 4723649
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||| ||||||||| |||||| |||||||||||||||||||||    
T  4723601 ttttttacaactttctctctcatactcacattatcttcttattctctct 4723649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 10550521 - 10550469
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||| ||||||    
T  10550521 tagagaaatgatatatgtacaactattttttcacaactttctctctcatactc 10550469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 12256936 - 12256984
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  12256936 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 12256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 16051445 - 16051405
Alignment:
Q  319 aattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  16051445 aattttctctctcatactcacattatcttcttattctctct 16051405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 16463302 - 16463373
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||| |||||||||||||||||    ||||||||   |||||||| |||||||||||||||| |||||||||||    
T  16463302 tagaggaatgatatttgtacaaca---tttgtacatccttctctctcatactcgcattatctttttattctctct 16463373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 27529564 - 27529612
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||| | |||||| |||||||||||||||||||||    
T  27529564 ttttgtacaactttctctattatactcacattatcttcttattctctct 27529612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 357
Target Start/End: Original strand, 28264541 - 28264609
Alignment:
Q  290 aaatgatatttgt-acaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||| | |||||  ||||||||||| ||||| ||| |||||| |||||||||||||||||||    
T  28264541 aaatgatatttattacaacagtttttgtacaactttctatctcatactcacattatcttcttattctct 28264609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 43725216 - 43725288
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||| ||| |||   |||| ||||||||| |||||| |||||| || |||||||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaactttctctctcatactcacattatgtttttattctctct 43725288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 5167770 - 5167723
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||| |||||| |||||| |||||| ||||||||||||    
T  5167770 acaattttctctctcatactcacattatattcttactctctcttcctt 5167723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 35798245 - 35798292
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| |||||||| |||||  |||||||||||||||||||||    
T  35798245 tttgtacaatcttctctctcatacttacattatcttcttattctctct 35798292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 4138246 - 4138188
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||||||| |||||||||   |||| ||||||||| |||||| ||||||    
T  4138246 agagaaatgatatttgtataactattttctaacaactttctctctcatactcacattat 4138188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 5455483 - 5455441
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  5455483 acaactttctctcttatactcacattatcttcttattctctct 5455441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 12208441 - 12208475
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  12208441 agagaaatgatatttgtacaaccatttttgtacaa 12208475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 18531600 - 18531638
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  18531600 agagaaatgatatttgtacaactattttttgacaatttt 18531638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 30339992 - 30340026
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  30339992 agagaaatgatatttgtacaaccatttttgtacaa 30340026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 34372888 - 34372930
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  34372888 acaattttctctctcatactcacattatcatcttattctctct 34372930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 34373038 - 34373088
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  34373038 atttttgtacaactttctctctcatactcacattatgtttttattctctct 34373088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 37827823 - 37827773
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||| |||||| ||||||||| |||||| ||||||||| |||||||||||    
T  37827823 attttggtacaactttctctcttatactcacattatctttttattctctct 37827773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 40700206 - 40700264
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||||| ||||||||||||||||||   |||| ||||||||| |||||| ||||||    
T  40700206 agagaaatggtatttgtacaactattttataacaactttctctctcatactcacattat 40700264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 41868399 - 41868357
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  41868399 acaactttctctctcatactcacattatcttcttattctctct 41868357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 44897626 - 44897664
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttc 325  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  44897626 gagaaatgatatttgtacaaccatttttgtacaactttc 44897664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 5852474 - 5852507
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||| ||||||||||||    
T  5852474 gagaaatgatatttgtacaaccatttttgtacaa 5852507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 10711735 - 10711792
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcatta 343  Q
    |||||||||||||||| ||| |||||||   |||||||||||||| |||||| |||||    
T  10711735 agagaaatgatatttgaacatctattttgtgacaattttctctctcatactcacatta 10711792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 359
Target Start/End: Original strand, 11126510 - 11126547
Alignment:
Q  322 tttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  11126510 tttctctctcatactcacattatcttcttattctctct 11126547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 18749434 - 18749397
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  18749434 gagaaatgatatttgtacaaccatttttgtataatttt 18749397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 28013966 - 28014039
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| ||||||||||||| | ||||  |||| ||||||||| |||||| | ||||| ||||||| |||||    
T  28013966 agagaaattatatttgtacaaccaatttttgacaactttctctctcatactcacgttatcctcttattttctct 28014039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 314
Target Start/End: Original strand, 28494857 - 28494886
Alignment:
Q  285 tagagaaatgatatttgtacaactattttt 314  Q
    ||||||||||||||||||||||||||||||    
T  28494857 tagagaaatgatatttgtacaactattttt 28494886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 29795446 - 29795515
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||||||||||| |||||   |||| ||||||||  |||||| ||||||  |||||||||    
T  29795446 agagaaatgatatttgtacaaccattttgtgacaactttctctcacatactcacattatactcttattct 29795515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 35705987 - 35705950
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  35705987 gagaaatgatatttgtacaaccatttttgtataatttt 35705950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 38021356 - 38021393
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  38021356 gagaaatgatatttgtacaactattttagtataatttt 38021393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 42554811 - 42554860
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||| ||||| ||||||||| |||||| |||||| |||||||||||||||    
T  42554811 ttttttacaactttctctctcatactcacattatattcttattctctctt 42554860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 305044 - 305000
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctct 330  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||    
T  305044 agagaaattatatttgtacaaccattttggtacaactttctctct 305000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 4319767 - 4319795
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  4319767 tagagaaatgatatttgtacaactatttt 4319795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 8352834 - 8352862
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  8352834 agagaaatgatatttgtacaactattttt 8352862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 10288148 - 10288176
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  10288148 tagagaaatgatatttgtacaactatttt 10288176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 357
Target Start/End: Complemental strand, 13850222 - 13850174
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||| ||||||||| |||||| |||||| || |||||||||    
T  13850222 atttttgtacaactttctctctcatactcacattatgtttttattctct 13850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Complemental strand, 14891151 - 14891123
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  14891151 tagagaaatgatatttgtacaactatttt 14891123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 16051412 - 16051376
Alignment:
Q  323 ttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||| |||||||||||||||||||||    
T  16051412 ttctctctcatactcacattatcttcttattctctct 16051376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 17159567 - 17159603
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||  ||||||||    
T  17159567 agaaatgatatttgtacaactattttttaacaatttt 17159603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 18508125 - 18508161
Alignment:
Q  323 ttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||| |||||||||||||||||||||    
T  18508125 ttctctctcatactcacattatcttcttattctctct 18508161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 19637264 - 19637312
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||| | |||||| ||||||| |||||||||||||    
T  19637264 ttttgtacaactttctctttcatactcacattatcatcttattctctct 19637312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 19835857 - 19835905
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||| | |||||| ||||||| |||||||||||||    
T  19835857 ttttgtacaactttctctttcatactcacattatcatcttattctctct 19835905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 20247903 - 20247855
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  20247903 ttttgtacaactttctctctcatactcacattatgtttttattctctct 20247855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 23045091 - 23045119
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  23045091 tagagaaatgatatttgtacaactatttt 23045119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 25801873 - 25801801
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| | |||   |||| ||| ||||| |||||| ||||||  |||||||||||||    
T  25801873 gagaaatgatatttgtacaaccaatttgtgacaactttatctctcatactcacattatactcttattctctct 25801801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 26387932 - 26387892
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttc 325  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  26387932 tagagaaatgatatttgtacaaccattcttgtacaactttc 26387892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 28679163 - 28679211
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  28679163 ttttgtacaacattctctctcatactcatattatcttcttattctctct 28679211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 36383449 - 36383481
Alignment:
Q  274 ctcattattgctagagaaatgatatttgtacaa 306  Q
    |||||||||| ||||||||||||||||||||||    
T  36383449 ctcattattgttagagaaatgatatttgtacaa 36383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 38027651 - 38027603
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||| || |||||||||||||||||||||    
T  38027651 ttttgtacaaccttctctctcatattcacattatcttcttattctctct 38027603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 38600825 - 38600889
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta 351  Q
    |||||||||||| |||||| | ||||||  |||| ||||||||| |||||| |||||| ||||||    
T  38600825 gagaaatgatatatgtacatccattttttgacaactttctctctcatactcacattatattctta 38600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 40721806 - 40721854
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  40721806 ttttgtacaactttctctctcatactcacattatgtttttattctctct 40721854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 41157036 - 41156991
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||||||||| ||||||  ||||||||||||||||||||    
T  41157036 tttgtacaactttctctctcatactc--attatcttcttattctctct 41156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 14233705 - 14233632
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  14233705 agagaaatgatatttgtacaactatttttttacaactttctctctcatactcgcattatcttcttattctctct 14233632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 13924021 - 13924094
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| || ||| |||||||||||||||||||||    
T  13924021 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacattatcttcttattctctct 13924094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 32777896 - 32777973
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||| |||||||| |||||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcacattatcttcttattctctcttcctt 32777973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 41776186 - 41776259
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| ||||||| ||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcacatcatcttctcattctctctt 41776259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 6243045 - 6243117
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctctct 6243117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 25430656 - 25430729
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||||||||  |||| ||| |||||| |||||||||||||||||||||    
T  25430656 agagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcacattatcttcttattctctct 25430729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 37471654 - 37471726
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||  |||||||||||| |||||||||  ||||| |||||||||||||||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcacattatcttcttattctctct 37471726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 23265414 - 23265344
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||| |||||| |||||||||||||||||||    
T  23265414 gagaaatgatatttgtataactatttttatacaactttttctctcatactcacattatcttcttattctct 23265344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 43590704 - 43590778
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||| ||  ||||||||| || ||||||||| |||||| ||||||||||||||||||||||    
T  43590704 agagaaatgatatttgtataatcatttttgtataactttctctctcatactcacattatcttcttattctctctt 43590778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 355
Target Start/End: Complemental strand, 38939250 - 38939181
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| |||||| |||||| || |||||||    
T  38939250 agagaaatgatatttctacaactatttttgtacaactttctctctcatactcacattatgtttttattct 38939181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 357
Target Start/End: Complemental strand, 42768179 - 42768112
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||||||||||| ||||  |||||||||||||| |||||| ||||||| |||||||||||    
T  42768179 aaatgatatttgtacaactactttttgacaattttctctctcatactcacattatcctcttattctct 42768112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 38174294 - 38174221
Alignment:
Q  287 gagaaatgatatttgtacaactat-ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||| ||||  |||| ||||||||| |||||| |||||| ||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcacattatattcttattctctct 38174221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 36675336 - 36675408
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||| ||||||  ||||| || |||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactcatattatgttattattctctct 36675408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 37294605 - 37294677
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||| ||  | ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  37294605 tagagaaatgatatttgtaaaa--acttttgtacaaccttctctctcatactcacattatcttcttattctctct 37294677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 45405881 - 45405806
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||||| |||||  ||||| ||| ||||| |||||| |||||| || ||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactcacattatgtttttattctctctt 45405806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 359
Target Start/End: Complemental strand, 8233554 - 8233484
Alignment:
Q  289 gaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||  |||||||||||  ||||||||| ||||||  |||||||||||||| |||||    
T  8233554 gaaatgatatttgtacaatcatttttgtacatctttctctctcatactcctattatcttcttattttctct 8233484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 37392189 - 37392124
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta 351  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||| |||||| |||||| ||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacattatattctta 37392124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 45081398 - 45081471
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||| | ||||  |||||||| ||||| |||||| |||||| |||||||| ||||||    
T  45081398 gagaaatgatatttgtacaaccaatttttaacaattttgtctctcatactcacattatgttcttattttctctt 45081471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 4148691 - 4148643
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  4148691 ttttgtacaatattctctctcatactcacattatcttcttattctctct 4148643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 22836175 - 22836127
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  22836175 ttttgtacaactttctctctcatactcacattatcttcttattctctct 22836127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 34838306 - 34838258
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  34838306 ttttgtacaatcttctctctcatactcacattatcttcttattctctct 34838258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 357
Target Start/End: Complemental strand, 35346023 - 35345953
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||||||| ||| |||||||||||||||||||  || || ||| | ||||||| |||||||||    
T  35346023 gagaaatgatatttgtccaattatttttgtacaattttcttcctcatcctcaccttatctttttattctct 35345953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 43605687 - 43605641
Alignment:
Q  313 ttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||    
T  43605687 ttgtacaatcttctctctcatactcacattatcttcttattctctct 43605641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Original strand, 7010683 - 7010735
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||||||||||||||||||  ||||||  |||||||||||||| ||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactc 7010735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 9963695 - 9963763
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctc-taatactcgcattatcttcttatt 353  Q
    |||||||||||||||||||||  ||||||  ||||||||||||| | |||||| ||||||| |||||||    
T  9963695 agagaaatgatatttgtacaataattttttgacaattttctctcatcatactcacattatcctcttatt 9963763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 27300381 - 27300429
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| ||| || |||||||||||||||||||||    
T  27300381 ttttgtacaactttctctctcatattcacattatcttcttattctctct 27300429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 32020524 - 32020468
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||||||||| ||||||  | || ||||||||| |||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactcgcattat 32020468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 22767173 - 22767220
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||| |||||| |||||||  |||||||||||||||||    
T  22767173 acaattttctctctcatactcacattatccccttattctctcttcctt 22767220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 34578450 - 34578415
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||| ||||||||||||    
T  34578450 tagagaaatgatatttgtacaaccatttttgtacaa 34578415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 42658648 - 42658723
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttccttc 365  Q
    ||||||||| |||||| ||| ||||  |||| ||||||||| ||||||||||||| || ||| |||||||| ||||    
T  42658648 aaatgatatatgtacatctactttttgacaactttctctctcatactcgcattatattattaatctctctttcttc 42658723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 317
Target Start/End: Original strand, 1646256 - 1646286
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgta 317  Q
    |||||||||||||||||||||||||||||||    
T  1646256 gagaaatgatatttgtacaactatttttgta 1646286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 324
Target Start/End: Complemental strand, 3893466 - 3893432
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||| ||||||||||    
T  3893466 aaatgatatttgtacaactattttggtacaatttt 3893432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 5502369 - 5502443
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| | |||   |||| ||||||||| ||| || ||||||  |||||||||||||    
T  5502369 tagagaaatgatatttgtacaaccactttgtgacaactttctctctcatattcacattattatcttattctctct 5502443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 9550437 - 9550395
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  9550437 acaactttctctctcatactcacattatcttcttattctctct 9550395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 360
Target Start/End: Original strand, 11138910 - 11138980
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||||||   |||| ||||||||| ||||||  || || ||||||||| |||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatactcatatgatattcttattccctctt 11138980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 20995096 - 20995046
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||  |||||||| |||||  |||||||||||||||||||||    
T  20995096 atttttgtacaaccttctctctcatacttacattatcttcttattctctct 20995046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 22203287 - 22203253
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  22203287 agagaaatgatatttgtacaaccatttttgtacaa 22203253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 28156202 - 28156240
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  28156202 agagaaatgatatttgtacaaccattttggtacaatttt 28156240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 32234490 - 32234440
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||| ||||||||||||| | ||| || |||||||||||||||||||||    
T  32234490 atttttatacaattttctctttcatattcacattatcttcttattctctct 32234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 34473990 - 34474032
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  34473990 acaattttctctctcatactcacattatcctcttattctctct 34474032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 35701899 - 35701865
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  35701899 agagaaatgatatttgtacaaccatttttgtacaa 35701865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 42716361 - 42716403
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  42716361 acaactttctctctcatactcacattatcttcttattctctct 42716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 43419878 - 43419928
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatact 336  Q
    |||||||||||||||||||||||| |||   |||||||||||||| |||||    
T  43419878 agagaaatgatatttgtacaactaatttgtgacaattttctctcttatact 43419928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 7325725 - 7325798
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | | |||   |||| ||||||||| |||||| |||||| || |||||||||||    
T  7325725 agagaaatgatatttgtacatccactttataacaactttctctctcatactcacattatgtttttattctctct 7325798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 21649239 - 21649206
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||| ||||||||||||    
T  21649239 gagaaatgatatttgtacaaccatttttgtacaa 21649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 27300346 - 27300379
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||| ||||||||||||    
T  27300346 gagaaatgatatttgtacaaccatttttgtacaa 27300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 39884549 - 39884492
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcatta 343  Q
    ||||||||||||||||||||| ||||||  |||||| || ||||| |||||| |||||    
T  39884549 agagaaatgatatttgtacaattattttattacaatattatctctcatactcacatta 39884492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 40413410 - 40413337
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| ||||||   |||| ||||||||| |||||| | ||||  ||||||| |||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatactcacgttattctcttattttctct 40413337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 40459798 - 40459749
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||| ||||||||| |||||| |||||| || ||||||||||||    
T  40459798 ttttgtacaactttctctctcatactcacattatatttttattctctctt 40459749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 355
Target Start/End: Complemental strand, 3394787 - 3394719
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtac-aattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||| ||||||||||| |||||||||| |||||| | ||| ||| || | |||||||||||||||    
T  3394787 agaaatgaaatttgtacaaccatttttgtacaaattttttttctcatattcacgttatcttcttattct 3394719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 7279956 - 7279916
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||| ||||||||| |||||| |||||||||||||||||||    
T  7279956 acaactttctctctcatactcacattatcttcttattctct 7279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 9985702 - 9985666
Alignment:
Q  323 ttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||| |||||||||||||||||||||    
T  9985702 ttctctctcatactcacattatcttcttattctctct 9985666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 14228742 - 14228790
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| ||| || ||||||||||||||    
T  14228742 ttttgtacaactttctctctcatactcacatgatgttcttattctctct 14228790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 18550014 - 18550062
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  18550014 ttttgtacaacattctctctcatactcatattatcttcttattctctct 18550062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 22203251 - 22203203
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| || ||||| ||||||  ||||||||||||||||||||    
T  22203251 ttttgtacaatattttctctcatactcatattatcttcttattctctct 22203203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Original strand, 23708974 - 23709006
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgta 317  Q
    ||||||||||||||||||||||| |||||||||    
T  23708974 tagagaaatgatatttgtacaaccatttttgta 23709006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 23709011 - 23709059
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||| ||| |||||| |||||||||||||||||||||    
T  23709011 ttttgtacaaccttctatctcatactcacattatcttcttattctctct 23709059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 30462782 - 30462714
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||| | |||||||||| |||||| ||||  ||| ||||| ||| || |||||||||||||||||    
T  30462782 gagaaatgttgtttgtacaacaatttttttacagctttttctctcatattcacattatcttcttattct 30462714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 34247783 - 34247855
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||| | ||| ||||| |||||| |||||||||  ||||| |||| | ||||||||||||||    
T  34247783 gagaaatggtatttgaaaaaccattttagtacaactttctctctcttactcacattgtattcttattctctct 34247855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 34494666 - 34494626
Alignment:
Q  319 aattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| |||||| | |||||||||||||||||||    
T  34494666 aattttctctctcatactcacgttatcttcttattctctct 34494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 37784410 - 37784362
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| ||||||  ||||| || |||||||||||    
T  37784410 ttttgtacaattttctctctcatactcatattatgtttttattctctct 37784362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 42688462 - 42688510
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| |||||||||||| ||||||  ||||||| ||||||||||||    
T  42688462 ttttgtataattttctctctcatactcatattatctacttattctctct 42688510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 35368621 - 35368694
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcacattatcttcttattctctct 35368694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 29057659 - 29057731
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattatcttcttattctctct 29057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 49361896 - 49361818
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||    
T  49361896 agagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcacattatcttcttattctctcttcctt 49361818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 50745559 - 50745632
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  50745559 agagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctctct 50745632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 29846952 - 29846881
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||| ||||||||||||    
T  29846952 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcacattatattcttattctct 29846881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 48490575 - 48490501
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  48490575 tagagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcacattatctttttattctctct 48490501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 43149403 - 43149335
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||    
T  43149403 gagaaatgttatttgtacaactatttttgtacaactttctttctcatactcacattatcttcttattct 43149335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 47484290 - 47484363
Alignment:
Q  287 gagaaatgatatttgtacaactatttt-tgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||||| |||||||||||    
T  47484290 gagaaatgatatttgtacaaccattttttgtacaattttttctctcatactcacattatctttttattctctct 47484363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 21481777 - 21481847
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||   ||||||||| ||| ||||| |||||| |||||||||||||||||||||    
T  21481777 agagaaatgatatttgtacaact---tttgtacaactttttctctcatactcacattatcttcttattctctct 21481847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 43220202 - 43220131
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||| |||||||| |||||| ||||||||| || ||||||||| |||||| |||||||||||||||||||    
T  43220202 agagaattgatatttttacaaccatttttgtaaaactttctctctcatactcacattatcttcttattctct 43220131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 361
Target Start/End: Original strand, 3484770 - 3484844
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttc 361  Q
    |||||||||||||||| |||| |||||  ||||| ||||||||| |||||| |||||| ||||||||||||||||    
T  3484770 gagaaatgatatttgtccaaccattttattacaactttctctctcatactcacattatattcttattctctcttc 3484844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 48205078 - 48205128
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  48205078 atttttgtacaattttctctctcatactcacattatctttttattctctct 48205128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 347
Target Start/End: Original strand, 48117346 - 48117407
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatctt 347  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| | |||||| |||||||||    
T  48117346 agagaaatgatatttatacaaccatttttgtacaactttctctttcatactcacattatctt 48117407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 2935568 - 2935499
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| ||||||||| ||||   ||||||||| ||||||| | |||||| |||||||||||||||||||||    
T  2935568 gagaaataatatttgtataact---tttgtacaactttctctttcatactcacattatcttcttattctctct 2935499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 8627898 - 8627940
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  8627898 acaattttctctctcatactcacattatcttcttattctctct 8627940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 9159108 - 9159070
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9159108 agagaaatgatatttgtacaaccatttttgtacaatttt 9159070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 11405022 - 11404948
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||| |  |||  ||||||||||| ||||||||| |||||  ||||||| |||||||||||||    
T  11405022 tagagaaatgatatttcttgaaccgtttttgtacaactttctctctcatacttacattatcctcttattctctct 11404948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 51032654 - 51032612
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  51032654 acaattttctctctcatactcacattatcttcttattctctct 51032612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 9027648 - 9027697
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||| ||| ||||| |||||| ||||||||||||||||||||||    
T  9027648 ttttgtacaactttatctctgatactcacattatcttcttattctctctt 9027697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 23907048 - 23906975
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||| |  ||||| ||||||||| |||||| ||| |  ||||||||||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatactcacatgagattcttattctctct 23906975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 26548834 - 26548777
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||| |||||| ||||||    
T  26548834 gagaaataatatttggacaactattttggtacaactttctctctcatactcacattat 26548777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 43169814 - 43169741
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||| ||||| |||||| ||||||  |||||||||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttttctctcatactcacattattctcttattctctct 43169741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 44937218 - 44937291
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||  |||| ||||||| | |||||| || |||| |||| ||||||||    
T  44937218 agagaaatgatatttgtacaacaattttttgacaactttctcttttatactcacaatatcctcttgttctctct 44937291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 1402685 - 1402733
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  1402685 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 1402733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 7351676 - 7351632
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttatt 353  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||    
T  7351676 atttttgtacaattttctctctcatactcatattatcttcttatt 7351632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 9159074 - 9159030
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttatt 353  Q
    |||||||||||||||||||| | |||||| |||||||||||||||    
T  9159074 atttttgtacaattttctctttcatactcacattatcttcttatt 9159030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 17118432 - 17118480
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||||||    
T  17118432 ttttgtacaattttttctctcatactcacattatcttattattctctct 17118480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 29525268 - 29525316
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| |||||||| |||||| |||||||||||||| ||||||    
T  29525268 ttttgtacaatattctctctcatactcacattatcttcttatcctctct 29525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 30664538 - 30664586
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  30664538 ttttgtacaactttctctctcatactcacattatcttcttattttctct 30664586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 38471677 - 38471725
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| |||||| |||||| || |||||||||||    
T  38471677 ttttgtacaattttctctctcatactcacattatgtttttattctctct 38471725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 337
Target Start/End: Complemental strand, 38957573 - 38957522
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactc 337  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||    
T  38957573 tagagaaatgatatttgtacaactatttttg-acaactttttctctcatactc 38957522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 44689838 - 44689886
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| || ||||| |||||| |||||||||||||||||||||    
T  44689838 ttttgtacaatcttttctctcatactcacattatcttcttattctctct 44689886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 51487760 - 51487829
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||  |||||||  |||||||||||||| |||||| | |||| || |||||||||||    
T  51487760 agaaatgatatttgtaca--tattttttgacaattttctctctcatactcacgttatatttttattctctct 51487829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 53021188 - 53021224
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatt 322  Q
    ||||||||||||||||||||||||||||||| |||||    
T  53021188 agagaaatgatatttgtacaactatttttgtgcaatt 53021224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 7351711 - 7351672
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  7351711 tagagaaatgatatttgtacaaccatttttgtataatttt 7351672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Complemental strand, 34145611 - 34145572
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  34145611 tagagaaatgatatttgtacaactattttagtataatttt 34145572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 43883314 - 43883385
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| ||||||  |||||||||||| | ||| ||  |||||  |||||||||||||    
T  43883314 agaaatgatatttgtacaaccattttttgacaattttctcttttatattcatattatactcttattctctct 43883385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 50876424 - 50876349
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||| | ||||||  ||||| || ||||| ||||||    
T  50876424 tagagaaatgatatttgtacaacaattttttgacaactttctctatcatactcatattatgtttttattttctctt 50876349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 1834539 - 1834589
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| |||| ||||||||| |||||| |||||| ||||||||||||||    
T  1834539 atttttgaacaactttctctctcatactcacattatattcttattctctct 1834589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 9557960 - 9557910
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  9557960 atttttgtacaactttctctctcatactcacattatgtttttattctctct 9557910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 29555874 - 29555824
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctcttc 361  Q
    ||||||||||  |||||||| |||||| |||||||||||| ||||||||||    
T  29555874 ttttgtacaaccttctctctcatactcacattatcttctttttctctcttc 29555824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 31017424 - 31017382
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| | |||||||||||||||||||    
T  31017424 acaattttctctctcatactcacgttatcttcttattctctct 31017382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 32008074 - 32008116
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||    
T  32008074 acaactttctctctcatactcgcattatattcttattctctct 32008116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 353
Target Start/End: Original strand, 33971918 - 33971960
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttatt 353  Q
    |||||||||||||| ||||| |||||| |||||||||||||||    
T  33971918 ttttgtacaattttatctctcatactcacattatcttcttatt 33971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 41309041 - 41309083
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  41309041 acaattttctctctcatactcacattatcctcttattctctct 41309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 44826967 - 44827036
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| ||||||||||||||   ||||||||||||| ||||| | |||| ||||||||| ||||| |||||    
T  44826967 gagaaattatatttgtacaact---tttgtacaattttttctctcaaactcacattatctttttattatctct 44827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 46952948 - 46953006
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||||||||||| ||||||  | || ||||||||| |||||| ||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatactcacattat 46953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 47683799 - 47683865
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta 351  Q
    ||||||||||||||||||||||| |||||   |||| ||||||||| |||||| |||| | ||||||    
T  47683799 tagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattgtgttctta 47683865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 347
Target Start/End: Complemental strand, 50318444 - 50318383
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatctt 347  Q
    |||| |||||| ||||| |||||||||||| || || ||||||||| ||||||||||||||||    
T  50318444 tagaaaaatgacatttgaacaactattttt-tataactttctctctcatactcgcattatctt 50318383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 54007473 - 54007530
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgta-caattttctctctaatactcgcatt 342  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||    
T  54007473 tagagaaatgatatttctacaacta-ttttgtagcaattttctctctcatactcacatt 54007530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Complemental strand, 55361294 - 55361236
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    |||||||||||||||||||||| |||| |  |||| ||||||||| |||||| ||||||    
T  55361294 agagaaatgatatttgtacaaccatttcttgacaactttctctcttatactcacattat 55361236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 9719512 - 9719455
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||||||||||||||||| | ||||  ||||||||| |||| |||||| ||||||    
T  9719512 gagaaatgatatttgtacaaccactttttgacaattttccctctcatactcacattat 9719455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 14839081 - 14839032
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||  |||||||  |||||| ||||||||||||||||||||||    
T  14839081 ttttgtacaaccttctctcccatactcacattatcttcttattctctctt 14839032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 14839116 - 14839083
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||| ||||||||||||    
T  14839116 gagaaatgatatttgtacaaccatttttgtacaa 14839083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 23869038 - 23868981
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||||||||||||||||| |||||   |||||||||||| | |||||| ||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatactcacattat 23868981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 36318343 - 36318270
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| | | | ||||  |||||||||||||| ||||||  |||||| | |||||||||||    
T  36318343 agagaaatgatatttgtatatccactttttgacaattttctctctcatactcatattatccttttattctctct 36318270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 45205288 - 45205337
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatact 336  Q
    |||||||||||||||||||||||||||   |||||||| ||||| |||||    
T  45205288 gagaaatgatatttgtacaactattttgtgacaattttttctctcatact 45205337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 315
Target Start/End: Complemental strand, 6178496 - 6178468
Alignment:
Q  287 gagaaatgatatttgtacaactatttttg 315  Q
    |||||||||||||||||||||||||||||    
T  6178496 gagaaatgatatttgtacaactatttttg 6178468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 13724438 - 13724398
Alignment:
Q  319 aattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||||||| |||||| |||||||    
T  13724438 aattttctctctcatactcgcattattttcttaatctctct 13724398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 14847554 - 14847506
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| |||||||||||| |||||| |||||| || |||||||||||    
T  14847554 ttttgtataattttctctctcatactcacattatgtttttattctctct 14847506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 32688020 - 32687948
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |  |||  | |||||||| ||| ||| |  |||||||||||||||||||||    
T  32688020 gagaaatgatatttgtacaaccaccttttgataattttctttctcatatttacattatcttcttattctctct 32687948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 35554174 - 35554106
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctc 356  Q
    |||||||||||||||| ||  | ||||  |||| ||||||||| |||||| ||||||| ||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctcatactcacattatcctcttattctc 35554106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 36799397 - 36799425
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  36799397 agagaaatgatatttgtacaactattttt 36799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 37585478 - 37585514
Alignment:
Q  323 ttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||| |||||||||||||||||||||    
T  37585478 ttctctctcatactcacattatcttcttattctctct 37585514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 42888808 - 42888760
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| |||||  ||||||||| ||||| |||||    
T  42888808 ttttgtacaattttctctctcatacttacattatctttttattttctct 42888760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 44689793 - 44689825
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||| ||||||||||||    
T  44689793 agaaatgatatttgtacaaccatttttgtacaa 44689825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 45529014 - 45528986
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  45529014 agagaaatgatatttgtacaactattttt 45528986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 50559284 - 50559256
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  50559284 agagaaatgatatttgtacaactattttt 50559256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 17048 - 17121
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  17048 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcgcattatcttcttattctctct 17121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 18707 - 18635
Alignment:
Q  287 gagaaatgatatttgtacaa-ctatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | |||| || |||||||||||||| |||||  ||||||| | |||||||||||    
T  18707 gagaaatgatatttgtacaatcaatttgtg-acaattttctctctcatacttacattatccttttattctctct 18635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 2165361 - 2165288
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  2165361 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcgcattatcttcttattctctct 2165288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 2176994 - 2176921
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  2176994 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcgcattatcttcttattctctct 2176921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 9395397 - 9395325
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcacattatcttcttattctctct 9395325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 17442832 - 17442905
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  17442832 agagaaataatatttgtacaaccatttttgtacaactttctctcttatactcacattatcttcttattatctct 17442905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 16121163 - 16121235
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||||| ||||||| | |||||  |||||||||||||||||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatacttacattatcttcttattctctct 16121235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 25567551 - 25567478
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||||| |||||||||||| ||| ||||| |||||| ||||||||||||||| |||||    
T  25567551 agagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcacattatcttcttattttctct 25567478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 356
Target Start/End: Complemental strand, 32135491 - 32135422
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctc 356  Q
    ||||||||||||||||||||  |||||||||||| ||||||| | |||||| ||||||||||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcacattatcttcttattctc 32135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 22422164 - 22422233
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||||||||||   ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  22422164 gagaaatgttatttgtacaact---tttgtacaactttctctctcatactcacattatcttcttattctctct 22422233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 25562001 - 25561928
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||||  |||||| ||||| ||| ||||| |||||| |||||||||||||||||||||    
T  25562001 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcacattatcttcttattctctct 25561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 26101515 - 26101442
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||||  |||||| ||||| ||| ||||| |||||| |||||||||||||||||||||    
T  26101515 agagaaatgatattcgtacaatcatttttatacaactttatctctcatactcacattatcttcttattctctct 26101442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 32644623 - 32644696
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||||||||||||||||||||||  |||| ||||||||| |||||| |||||| || ||| ||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcacattatatttttactctctctt 32644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 1196057 - 1196130
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||  | ||||  |||| |||||||||||||||| ||||||  |||||||||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaactttctctctaatactcacattatactcttattctctct 1196130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 31517241 - 31517168
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | ||||  |||| ||| ||||| |||||| ||||||  |||||||||||||    
T  31517241 agagaaatgatatttgtacaaccactttttgacaactttttctctcatactcacattatactcttattctctct 31517168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 16865565 - 16865627
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctt 350  Q
    |||||||||||||||||||  | |||||||||| ||||| ||| || ||| ||||||||||||    
T  16865565 agaaatgatatttgtacaatcacttttgtacaactttctatcttatgctcacattatcttctt 16865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 21506377 - 21506419
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||| ||||||||| |||||| |||||||||||||||||||||    
T  21506377 acaactttctctctcatactcacattatcttcttattctctct 21506419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 31413539 - 31413585
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatact 336  Q
    ||||||||||||||||| ||||||   ||||||||||||||||||||    
T  31413539 aaatgatatttgtacaattattttgtgacaattttctctctaatact 31413585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 2163702 - 2163774
Alignment:
Q  287 gagaaatgatatttgtacaa-ctatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | |||| || |||||||||||||| |||||  ||||||| | |||||||||||    
T  2163702 gagaaatgatatttgtacaatcaatttgtg-acaattttctctctcatacttacattatccttttattctctct 2163774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 2175335 - 2175407
Alignment:
Q  287 gagaaatgatatttgtacaa-ctatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | |||| || |||||||||||||| |||||  ||||||| | |||||||||||    
T  2175335 gagaaatgatatttgtacaatcaatttgtg-acaattttctctctcatacttacattatccttttattctctct 2175407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 3180064 - 3179991
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||  ||||||  |||| ||| ||||| ||| || ||||||| | |||||||||||    
T  3180064 agagaaatgatatttgtacaatcattttttgacaactttatctcttatattcacattatcattttattctctct 3179991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 6997621 - 6997584
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  6997621 gagaaatgatatttgtacaaccatttttgtataatttt 6997584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 314
Target Start/End: Original strand, 20712065 - 20712094
Alignment:
Q  285 tagagaaatgatatttgtacaactattttt 314  Q
    ||||||||||||||||||||||||||||||    
T  20712065 tagagaaatgatatttgtacaactattttt 20712094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 27790306 - 27790273
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||| ||||||||||||    
T  27790306 gagaaatgatatttgtacaaccatttttgtacaa 27790273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 12151893 - 12151845
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| || | ||||||| |||||| |||||||||||||||||||||    
T  12151893 ttttgtataactctctctctcatactcacattatcttcttattctctct 12151845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 12177577 - 12177641
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta 351  Q
    |||||||| ||||||||||||||||||   |||| ||||||| | |||||| |||||| ||||||    
T  12177577 gagaaatgttatttgtacaactattttgtgacaactttctctttcatactcacattatattctta 12177641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 30622021 - 30622061
Alignment:
Q  284 ctagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||| |||  |||||||||    
T  30622021 ctagagaaatgatatttgtacaactactttattacaatttt 30622061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 12203157 - 12203230
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| || ||| |||||||||||||||||||||    
T  12203157 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcacattatcttcttattctctct 12203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 40201182 - 40201108
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||| ||| || |||||||||||||||||||||    
T  40201182 tagagaaatgatatttatacaaccatttttgtacaatattctctctcatagtcacattatcttcttattctctct 40201108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 38919862 - 38919931
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||||    
T  38919862 agagaaatgatatttgtacaactatttttgtacaactttctctc--atactcacattattttcttattctct 38919931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 359
Target Start/End: Original strand, 7080546 - 7080613
Alignment:
Q  292 atgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctctct 7080613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 43153122 - 43153048
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||| || ||||||||| ||||| |||||    
T  43153122 tagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcacattatctttttattttctct 43153048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 8442170 - 8442242
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| ||||||||||||| ||||||||| ||| || ||||||||| ||||| |||||    
T  8442170 gagaaatgatatttgtacaattatttttgtacaactttctctctcatattcacattatctttttattttctct 8442242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 11878439 - 11878510
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||||||||||| ||||||| || |||||||| ||| |||||| |||||| ||||||||||||    
T  11878439 agagaaatgatatttgtacaattatttttatataattttctatctcatactcacattattttcttattctct 11878510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 4434481 - 4434554
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||  |||||||| ||||| |||||| ||||||  |||||||||||||    
T  4434481 agagaaatgatatttgtacaaccattttttgacaattttttctctcatactcacattattatcttattctctct 4434554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 9957262 - 9957189
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||||||| || ||||| ||| |||||| ||||||||||| ||| |||||    
T  9957262 agagaaatgatatttgtacaattatttttgtagaactttctttctcatactcacattatcttctcattatctct 9957189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 14206399 - 14206472
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||| |||||| ||||||| ||||||| |||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacattatcctcttattatctct 14206472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 8725484 - 8725410
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||||||||||||| | |||  ||||| ||||||||| |||||| |||||| ||||||||||||||    
T  8725484 tagagaaattatatttgtacaaccactttattacaactttctctctcatactcacattatattcttattctctct 8725410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 20985567 - 20985517
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  20985567 atttttgtacaactttctctctcatactcacattatcttcttattctctct 20985517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 34693254 - 34693204
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  34693254 atttttgtacaatcttctctctcatactcacattatcttcttattctctct 34693204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 39458666 - 39458740
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||||| | ||||  |||| ||||||||| |||||| ||||||| |||||||||||||    
T  39458666 tagagaaatgatatctgtacaaccagtttttgacaactttctctctcatactcacattatcctcttattctctct 39458740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 33910147 - 33910078
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||||||| |||| ||||||  |||| ||||||||| |||||| |||||| ||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcacattatattcttattctct 33910078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 16202731 - 16202803
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| |||||| |||||||   |||| ||||||||| |||||| ||||||| |||||||||||||    
T  16202731 gagaaatgatatatgtacacctattttgtgacaactttctctctcatactcacattatcctcttattctctct 16202803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 38387610 - 38387653
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctct 330  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  38387610 gagaaatgatatttgtacaaccatttttgtacaactttctctct 38387653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 42364465 - 42364512
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  42364465 tttgtacaactttctctctcatactcgcattatctttttattctctct 42364512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 13734421 - 13734347
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||||||| | |||   |||| ||||||||| |||||| |||||| |||||| ||||||||    
T  13734421 agagaaatgatatttgtacaaccactttatgacaactttctctctcatactcacattatattcttactctctctt 13734347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 22653688 - 22653738
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| ||||||||||||||| |||||    
T  22653688 atttttgtacaactttctctctcatactcacattatcttcttattttctct 22653738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 32732179 - 32732107
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||| |||||| |||| | || |||||||||||    
T  32732179 agagaaattatatttgtacaatcatttttgtacaactttctctctcatactcacatt-tttttttattctctct 32732107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 9940069 - 9940140
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||| ||||||||||||||   | | ||||| ||||||||| |||||| ||||||||||||| ||||||||    
T  9940069 agagaaataatatttgtacaact---tatatacaactttctctctcatactcacattatcttcttactctctctt 9940140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 359
Target Start/End: Original strand, 29227721 - 29227789
Alignment:
Q  291 aatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||| |||   |||| ||||||||| |||||| ||||||| |||||||| ||||    
T  29227721 aatgatatttgtacaactactttgtgacaactttctctctcatactcacattatcctcttattccctct 29227789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 36899517 - 36899469
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  36899517 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 36899469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 582897 - 582850
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  582897 acaattttctctctcatactcatattatattcttattctctcttcctt 582850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 25585529 - 25585494
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||| ||||||||||||    
T  25585529 tagagaaatgatatttgtacaaccatttttgtacaa 25585494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 41192585 - 41192624
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  41192585 tagagaaatgatatttgtacaactattttgctacaatttt 41192624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 2863585 - 2863630
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||    
T  2863585 ttttgtacaattttctctct-atactcacattattttcttattctct 2863630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 3031833 - 3031867
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  3031833 agagaaatgatatttgtacaaccatttttgtacaa 3031867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 3031869 - 3031915
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    |||||||||| ||||||| | |||||| |||||||||||||||||||    
T  3031869 ttttgtacaactttctctttcatactcacattatcttcttattctct 3031915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 5996666 - 5996704
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  5996666 agagaaatgatatttgtacaactattttttaacaatttt 5996704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 14523036 - 14523002
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  14523036 agagaaatgatatttgtacaaccatttttgtacaa 14523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 15532023 - 15531949
Alignment:
Q  287 gagaaatgatatttgtacaacta-tttttgt-acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||| ||| | ||||||| | |||||||||| | |||||| ||||||| |||||||||||||    
T  15532023 gagaaatgatatttgtataaccactttttgtgataattttctctgtcatactcacattatcctcttattctctct 15531949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 18729361 - 18729327
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  18729361 agagaaatgatatttgtacaaccatttttgtacaa 18729327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 324
Target Start/End: Complemental strand, 20985601 - 20985563
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  20985601 agagaaatgatatttgtacaaccatttttgtataatttt 20985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 27340910 - 27340952
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||| ||||||||||||||    
T  27340910 acaattttctctctcatactcacattatattcttattctctct 27340952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 30103489 - 30103439
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||| || |||||| || |||||||||||    
T  30103489 atttttgtacaattttctctctcatattcacattatatttttattctctct 30103439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 39032676 - 39032642
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||| ||||||||||||    
T  39032676 agagaaatgatatttgtacaaccatttttgtacaa 39032642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 6458787 - 6458852
Alignment:
Q  295 atatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||| ||| |||||||||||| ||||||| | |||||   ||||| |||||||||||||||    
T  6458787 atatttgtataaccatttttgtacaactttctctttcatacttatattatattcttattctctctt 6458852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 24486895 - 24486944
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatac 335  Q
    |||||||||||||||| ||||  |||||||||||||||||| ||| ||||    
T  24486895 agagaaatgatatttgaacaataatttttgtacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 31748336 - 31748369
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||||||||| |||||    
T  31748336 gagaaatgatatttgtacaactatttttttacaa 31748369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 33567280 - 33567211
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||| | |||   |||| ||||||||| |||||| ||||||  |||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattattctcttattctctct 33567211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 35596046 - 35595974
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| ||||||||||||| |||||||||||| ||||| | | ||| ||  ||| ||||||||||||||||    
T  35596046 agagaaat-atatttgtacaaccatttttgtacaactttctttatcatattcatattttcttcttattctctct 35595974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 4820190 - 4820238
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  4820190 ttttgtacaaccttctctctcatactcatattatcttcttattctctct 4820238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 12891132 - 12891084
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||| || |||||||||||||||||||||    
T  12891132 ttttgtacaacattctctctcatattcacattatcttcttattctctct 12891084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 14523000 - 14522956
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    |||| ||||||||||||||| |||||  |||||||||||||||||    
T  14523000 ttttttacaattttctctctcatactaacattatcttcttattct 14522956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 18729325 - 18729277
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||| | |||||| |||||||||||||||||||||    
T  18729325 ttttgtacaaccttctctttcatactcacattatcttcttattctctct 18729277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 19844381 - 19844353
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  19844381 agagaaatgatatttgtacaactattttt 19844353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 29803224 - 29803252
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  29803224 agagaaatgatatttgtacaactattttt 29803252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 34428159 - 34428187
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  34428159 agagaaatgatatttgtacaactattttt 34428187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Original strand, 35165678 - 35165706
Alignment:
Q  286 agagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||    
T  35165678 agagaaatgatatttgtacaactattttt 35165706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 37821161 - 37821113
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  37821161 ttttgtacaaccttctctcttatactcacattatcttcttattttctct 37821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 39032640 - 39032592
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| ||||||  ||||||||||||||||||||    
T  39032640 ttttgtacaaccttctctctcatactcatattatcttcttattctctct 39032592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 11121491 - 11121564
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | |||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  11121491 agagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcacattatcttcttattctctct 11121564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 359
Target Start/End: Complemental strand, 50460771 - 50460700
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| |||||||||||| ||||| ||| |||||| |||||||||||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcacattatcttcttattctctct 50460700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 30414874 - 30414947
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  30414874 agagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcacattatcttcttattttctct 30414947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 35030822 - 35030750
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| |||||||||||| |||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatacttacattatcttcttattctctct 35030750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 355
Target Start/End: Complemental strand, 16252819 - 16252751
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattct 355  Q
    ||||||||||||||||||||| |||||||||||| ||||||| | |||||| |||||||||| ||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcacattatcttcctattct 16252751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 29094803 - 29094734
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||   || ||||||| |||||||| |||||| |||||||||||||||||||||    
T  29094803 gagaaatgatatttgtacaact---ttcgtacaatcttctctctcatactcacattatcttcttattctctct 29094734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 40118753 - 40118703
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  40118753 atttttgtacaattttctctctcatactcacattatcttcttattctctct 40118703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 48689570 - 48689639
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||   |||||| |||||||||||| |||||| |||||||||| ||||||||||    
T  48689570 gagaaatgatatttgtacaact---tttgtataattttctctctcatactcacattatcttcatattctctct 48689639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 46903480 - 46903553
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||  ||||| ||||||||| |||||| |||||| || |||||||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatactcacattatgtttttattctctct 46903553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 48256920 - 48256990
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| ||||  |||||| ||||||||| ||| || |||||||||||||||||||||    
T  48256920 gagaaatgatatttgtacaaccattt--gtacaactttctctctcatattcacattatcttcttattctctct 48256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 324
Target Start/End: Original strand, 22674710 - 22674749
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22674710 tagagaaatgatatttgtacaactatttttgtacaatttt 22674749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 644701 - 644771
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||| ||||||||||||| |||||| ||||||||| ||||| | ||||||||||| || |||||||||    
T  644701 gagaaataatatttgtacaaccatttttatacaattttttctctcacactcgcattatatttttattctct 644771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 3826876 - 3826802
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||||||||||||| ||||  |||| ||| ||||| ||| || ||||||||||||||||| ||||    
T  3826876 agagaaatgatatttgtacaactaatttttaacaactttatctctcatattcacattatcttcttattctgtctt 3826802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 12972765 - 12972692
Alignment:
Q  283 gctagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||||||   |||| |||||  |||||||| |||||| |||| ||||||||||||||||    
T  12972765 gctagagaaatgatatttgtacaac---ttttatacaacattctctctcatactcacattttcttcttattctctct 12972692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 43757597 - 43757671
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| |||||  ||||| ||||||| | |||||| |||||| || |||||||||||    
T  43757597 tagagaaatgatatttgtacaaccattttgatacaactttctctttcatactcacattatgtttttattctctct 43757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 33111963 - 33111898
Alignment:
Q  295 atatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||||||||  |||||||||||  |||||||| |||||| |||||| |||||||||||||||    
T  33111963 atatttgtacaaccgtttttgtacaaccttctctctcatactcacattatattcttattctctctt 33111898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 40596115 - 40596042
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||||||||| |||||| |||||| |||||| |||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattcttactctctct 40596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 45272221 - 45272148
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | ||||  |||| ||||||||| |||||| ||||||| | |||||||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcacattatccttttattctctct 45272148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 48325839 - 48325766
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||||||||| ||| |||||| ||||||  |||||||||||||    
T  48325839 agagaaatgatatttgtacaaccattttgtgacaattttctatctcatactcacattatactcttattctctct 48325766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 40139126 - 40139198
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| |||||   |||| ||||||||| |||||| |||||| || |||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcacattatatttttattctctct 40139198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 37947255 - 37947208
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||    
T  37947255 tttgtacaattttctctatcatactcacattatcttcttattctctct 37947208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 324
Target Start/End: Original strand, 1100216 - 1100254
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  1100216 agagaaatgatatttgtacaaccatttttgtacaatttt 1100254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 3919333 - 3919383
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  3919333 atttttggacaactttctctctcatactcgcattatattcttattctctct 3919383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 30196724 - 30196802
Alignment:
Q  287 gagaaatgatatttgtacaa-ctatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||| ||||| | ||||||  |||| ||||||||| |||||| |||||| |||||||||||||| ||||    
T  30196724 gagaaatgatatttctacaatcaattttttgacaactttctctctcatactcacattatattcttattctctctacctt 30196802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 43105138 - 43105188
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||| ||||||||||||||| ||||||  ||||||||||||||||||||    
T  43105138 atttttatacaattttctctctcatactcatattatcttcttattctctct 43105188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 43612141 - 43612063
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||||||||||||||||||||| |||||   |||| ||||||||| ||||   |||||| |||||| ||||||||||||    
T  43612141 agagaaatgatatttgtacaaccattttatgacaactttctctctcatacatacattatattcttactctctcttcctt 43612063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 27687580 - 27687507
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| |||||   |||| ||| ||||| |||||| |||||| || |||||||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcacattatatttttattctctct 27687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 51080148 - 51080104
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaat 333  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  51080148 agaaatgatatttgtacaactatttttg-acaactttctctctaat 51080104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 354
Target Start/End: Original strand, 4618658 - 4618722
Alignment:
Q  290 aaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattc 354  Q
    |||||||||||||||||| ||||||||||||   | ||||| |||||| |||||| |||||||||    
T  4618658 aaatgatatttgtacaacaatttttgtacaaccctatctctcatactcacattatattcttattc 4618722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 5574295 - 5574247
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  5574295 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 5574247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 354
Target Start/End: Complemental strand, 21446279 - 21446211
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattc 354  Q
    ||||||||||||||| |||||  ||||| |||||| ||||||||| |||||| |||||| || ||||||    
T  21446279 agagaaatgatatttatacaatcattttagtacaactttctctctcatactcacattatatttttattc 21446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Original strand, 37690429 - 37690501
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||  | |||   |||||||||||||| |||||| ||||||  |||||||||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaattttctctctcatactcacattattctcttattctctct 37690501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 41507254 - 41507190
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttctta 351  Q
    ||||||||||||||||||||| |||||   |||| ||||||||| |||||| |||||| ||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatgttctta 41507190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 47059950 - 47059878
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||| ||||||  |||| ||| ||||  ||| || |||||| ||||||||||||||    
T  47059950 gagaaatgatatttgtacaaccattttttaacaactttatctcatatattcacattatattcttattctctct 47059878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 48962021 - 48962069
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  48962021 ttttgtacaaccttctctctcatactcacattatcttcttattctctct 48962069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 29638751 - 29638798
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||  |||||||| |||||| |||||||||||||||||||||    
T  29638751 tttgtacaaccttctctctcatactcacattatcttcttattctctct 29638798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 34157560 - 34157607
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctcttcctt 364  Q
    |||| ||| ||||| |||||| ||||||||||||||||||||||||||    
T  34157560 acaactttatctctcatactcacattatcttcttattctctcttcctt 34157607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 320
Target Start/End: Complemental strand, 41564953 - 41564918
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41564953 tagagaaatgatatttgtacaaccatttttgtacaa 41564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 359
Target Start/End: Original strand, 51571416 - 51571487
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | ||||  |||| ||||||||| ||| || ||||||  |||||||||||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctcatattcacattattatcttattctctct 51571487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 1788374 - 1788332
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||| ||||| |||||| |||||||||||||||||||||    
T  1788374 acaattttatctctcatactcacattatcttcttattctctct 1788332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Complemental strand, 2827748 - 2827698
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  2827748 atttttgtacaactttctctctcatactcacattatgtttttattctctct 2827698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 2854996 - 2854950
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||| || ||||| |||||| |||||||||||||||||||    
T  2854996 ttttgtacaatcttttctctcatactcacattatcttcttattctct 2854950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 5975546 - 5975620
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| | | ||||  |||| ||||||||| |||||| |||||| |||||| |||||||    
T  5975546 tagagaaatgatatatgtacatccactttttgacaactttctctctcatactcacattatattcttaatctctct 5975620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Complemental strand, 8464543 - 8464501
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| |||||| ||||||||||||||    
T  8464543 acaattttctctctcatactcacattatattcttattctctct 8464501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 314
Target Start/End: Original strand, 8905725 - 8905755
Alignment:
Q  284 ctagagaaatgatatttgtacaactattttt 314  Q
    |||||||||||||||||||||||||||||||    
T  8905725 ctagagaaatgatatttgtacaactattttt 8905755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 12990540 - 12990502
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttc 325  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  12990540 gagaaatgatatttgtacaaccatttttgtacaactttc 12990502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 15061886 - 15061928
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  15061886 acaattttctctctcatactcacattatcatcttattctctct 15061928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 344
Target Start/End: Original strand, 19427520 - 19427578
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattat 344  Q
    ||||||||||||||| |||||| ||||| |||||| ||||||||  |||||| ||||||    
T  19427520 agagaaatgatatttatacaaccattttggtacaactttctctcacatactcacattat 19427578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 22674745 - 22674795
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||| ||||||||| |||||| |||||| ||| ||||||||||    
T  22674745 atttttgtacaactttctctctcatactcacattattttcatattctctct 22674795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 28253056 - 28253098
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  28253056 acaattttctctctcatactcacattatcctcttattctctct 28253098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 41425242 - 41425280
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttc 325  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  41425242 gagaaatgatatttgtacaactattttggtacaactttc 41425280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 44672060 - 44672022
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattct 355  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  44672060 acaattttctctctcatactcacattatcttcttattct 44672022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 48390113 - 48390067
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctct 357  Q
    ||||||||||  |||||||| |||||| |||||||||||||||||||    
T  48390113 ttttgtacaaacttctctctcatactcacattatcttcttattctct 48390067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 1100250 - 1100295
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattc 354  Q
    |||||||||||| ||||||| | |||||| ||||||||||||||||    
T  1100250 atttttgtacaactttctctatcatactcacattatcttcttattc 1100295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 12990493 - 12990456
Alignment:
Q  323 ttctctctaatactcgcattatcttcttattctctctt 360  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  12990493 ttctctctcatactcacattatcttcttattctctctt 12990456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 22331366 - 22331403
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  22331366 gagaaatgatatttgtacaaccattttggtacaatttt 22331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 23472108 - 23472141
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    |||||||||||||||||||||||||||| |||||    
T  23472108 gagaaatgatatttgtacaactatttttatacaa 23472141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 26760562 - 26760599
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  26760562 gagaattgatatttgtacaaccatttttgtacaatttt 26760599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 32196679 - 32196720
Alignment:
Q  317 acaattttctctctaatactcgcattatcttcttattctctc 358  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  32196679 acaattttctctctcatactcacattttcttcttattctctc 32196720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 41885755 - 41885804
Alignment:
Q  310 tttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||| |||||||||| |||| |||||| |||||| ||||||||||||||    
T  41885755 tttttatacaattttcactctcatactcacattatattcttattctctct 41885804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 43105105 - 43105142
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  43105105 gagaaatgatatttgtacaattatttttgtataatttt 43105142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Original strand, 49453490 - 49453563
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| | |||   |||| ||||||||| |||||| ||||||  | |||||||||||    
T  49453490 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattatacttttattctctct 49453563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 320
Target Start/End: Original strand, 50796002 - 50796035
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||| ||||||||||    
T  50796002 gagaaatgatatttgtacaactacttttgtacaa 50796035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 51718687 - 51718626
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgt-acaattttctctctaatactcgcattatctt 347  Q
    ||||||||||||||| ||||| |||||| | |||| ||||||||| |||||| |||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcacattatctt 51718626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 1689389 - 1689417
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  1689389 tagagaaatgatatttgtacaactatttt 1689417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 8391398 - 8391326
Alignment:
Q  287 gagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||||||||||||| |||   | || ||||| ||| |||||  ||||||| |||||||||||||    
T  8391398 gagaaatgatatttgtacaactactttgtgagaactttctttctcatacttacattatcctcttattctctct 8391326  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 8577575 - 8577543
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgta 317  Q
    ||||||||||||||||||||||| |||||||||    
T  8577575 tagagaaatgatatttgtacaaccatttttgta 8577543  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 11897209 - 11897257
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||| ||||||||| |||||| |||||| || |||||||||||    
T  11897209 ttttgtacaactttctctctcatactcacattatgtttttattctctct 11897257  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 23400025 - 23399977
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| |||||||| ||||||  ||| ||||||||||||||||    
T  23400025 ttttgtacaatcttctctctcatactcatattttcttcttattctctct 23399977  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 32873376 - 32873424
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||| || | ||| |||||| |||||||||||||||||||||    
T  32873376 ttttgtacaatcttttatctcatactcacattatcttcttattctctct 32873424  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 39815381 - 39815429
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||| |||| ||||||||| |||||| |||||| ||||||||||||||    
T  39815381 ttttggacaactttctctctcatactcacattatattcttattctctct 39815429  T

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Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 40240146 - 40240098
Alignment:
Q  312 tttgtacaattttctctctaatactcgcattatcttcttattctctctt 360  Q
    ||||||||| ||||||| | |||||| |||||||||| |||||||||||    
T  40240146 tttgtacaactttctctttcatactcacattatcttcatattctctctt 40240098  T

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Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 51728036 - 51727988
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  51728036 ttttgtacaaccttctctctcatactcacattatcttcttattatctct 51727988  T

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Target: scaffold0054 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 31661 - 31588
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||||| ||||||  |||| ||||||||| |||||| ||||||  |||||||||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcacattatactcttattctctct 31588  T

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Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 1881 - 1831
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctcttc 361  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||||    
T  1881 ttttgtacaatcttctctctcatactcacattatcttcttattctctcttc 1831  T

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Target: scaffold0172 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 9296 - 9337
Alignment:
Q  289 gaaatgatatttgtacaactatttttgtacaattttctctct 330  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  9296 gaaatgatatttgtacaactattttagtacaattttctctct 9337  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 48687 - 48737
Alignment:
Q  309 atttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||||  |||||||| |||||| |||||||||||||||||||||    
T  48687 atttttgtacaaccttctctctcatactcacattatcttcttattctctct 48737  T

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Target: scaffold0072 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 14612 - 14539
Alignment:
Q  286 agagaaatgatatttgtacaactatttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||||||||| | |||||  ||||||||| | | | |||||| |||||| ||||||||||||||    
T  14612 agagaaatgatatttgtacagccattttattacaattttttttttcatactcacattatattcttattctctct 14539  T

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Target: scaffold0651 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 4920 - 4880
Alignment:
Q  284 ctagagaaatgatatttgtacaactatttttgtacaatttt 324  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  4920 ctagagaaatgatatttgtacaaccattttggtacaatttt 4880  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 2978 - 3026
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    |||||||||||||| ||||| |||||| ||||||||||| |||||||||    
T  2978 ttttgtacaattttttctctcatactcacattatcttctcattctctct 3026  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 320
Target Start/End: Original strand, 145059 - 145094
Alignment:
Q  285 tagagaaatgatatttgtacaactatttttgtacaa 320  Q
    ||||||||||||||||||||||| ||||||||||||    
T  145059 tagagaaatgatatttgtacaaccatttttgtacaa 145094  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 145096 - 145144
Alignment:
Q  311 ttttgtacaattttctctctaatactcgcattatcttcttattctctct 359  Q
    ||||||||||  |||||||| |||||| ||||||||||||||| |||||    
T  145096 ttttgtacaacattctctctcatactcacattatcttcttattatctct 145144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 1076 - 1104
Alignment:
Q  285 tagagaaatgatatttgtacaactatttt 313  Q
    |||||||||||||||||||||||||||||    
T  1076 tagagaaatgatatttgtacaactatttt 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 11159 - 11207
Alignment:
Q  288 agaaatgatatttgtacaactatttttgtacaattttctctctaatact 336  Q
    |||||||||||||||||||| ||||||| |||| ||| ||||| |||||    
T  11159 agaaatgatatttgtacaaccatttttgaacaactttatctcttatact 11207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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