View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10305_low_20 (Length: 264)

Name: NF10305_low_20
Description: NF10305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10305_low_20
NF10305_low_20
[»] scaffold1439 (1 HSPs)
scaffold1439 (18-254)||(709-945)
[»] chr4 (11 HSPs)
chr4 (18-254)||(12611544-12611780)
chr4 (18-254)||(23802587-23802823)
chr4 (18-254)||(51463211-51463426)
chr4 (17-254)||(15447560-15447776)
chr4 (125-254)||(15344675-15344804)
chr4 (54-222)||(14951454-14951622)
chr4 (31-120)||(55377066-55377155)
chr4 (125-213)||(55376994-55377082)
chr4 (53-119)||(15344624-15344690)
chr4 (178-235)||(13043971-13044028)
chr4 (18-70)||(15344568-15344620)
[»] chr3 (10 HSPs)
chr3 (18-254)||(24152567-24152803)
chr3 (54-254)||(50243482-50243682)
chr3 (18-253)||(13522533-13522769)
chr3 (61-254)||(16643762-16643952)
chr3 (54-222)||(30152634-30152802)
chr3 (125-254)||(6819910-6820039)
chr3 (130-222)||(12952732-12952824)
chr3 (18-70)||(16643698-16643750)
chr3 (55-119)||(6819861-6819925)
chr3 (18-59)||(50243426-50243467)
[»] chr7 (9 HSPs)
chr7 (18-253)||(18455772-18456007)
chr7 (66-254)||(14273903-14274091)
chr7 (109-254)||(13864545-13864690)
chr7 (31-120)||(126105-126194)
chr7 (125-222)||(39291892-39291989)
chr7 (125-214)||(15978219-15978308)
chr7 (130-211)||(126183-126264)
chr7 (18-70)||(13864702-13864754)
chr7 (103-222)||(12192128-12192247)
[»] chr2 (13 HSPs)
chr2 (32-235)||(22501506-22501709)
chr2 (32-235)||(22509440-22509643)
chr2 (32-254)||(22173160-22173374)
chr2 (125-254)||(7187166-7187295)
chr2 (130-254)||(31520922-31521046)
chr2 (125-216)||(18388458-18388549)
chr2 (53-119)||(7187115-7187181)
chr2 (53-119)||(31520866-31520932)
chr2 (53-119)||(24884133-24884199)
chr2 (18-68)||(7187059-7187109)
chr2 (18-70)||(18388604-18388656)
chr2 (26-82)||(19819777-19819833)
chr2 (18-66)||(31520810-31520858)
[»] scaffold0125 (1 HSPs)
scaffold0125 (32-254)||(1233-1455)
[»] scaffold0394 (1 HSPs)
scaffold0394 (53-254)||(12718-12919)
[»] chr6 (13 HSPs)
chr6 (18-254)||(25619080-25619316)
chr6 (18-254)||(611432-611669)
chr6 (53-254)||(14978724-14978925)
chr6 (18-235)||(18585311-18585528)
chr6 (125-254)||(20556215-20556344)
chr6 (53-222)||(18982076-18982247)
chr6 (53-254)||(5833837-5834039)
chr6 (125-222)||(18398718-18398815)
chr6 (53-120)||(18398667-18398734)
chr6 (18-59)||(14978940-14978981)
chr6 (18-66)||(20556404-20556452)
chr6 (18-69)||(5834043-5834094)
chr6 (63-100)||(20556348-20556385)
[»] scaffold0057 (1 HSPs)
scaffold0057 (51-254)||(72103-72306)
[»] scaffold0290 (1 HSPs)
scaffold0290 (53-254)||(741-942)
[»] chr5 (9 HSPs)
chr5 (53-254)||(22412755-22412956)
chr5 (53-254)||(30138267-30138468)
chr5 (32-235)||(17875705-17875906)
chr5 (53-221)||(31456546-31456713)
chr5 (53-222)||(11342373-11342544)
chr5 (31-120)||(1168672-1168761)
chr5 (130-222)||(1168591-1168683)
chr5 (18-57)||(22412699-22412738)
chr5 (18-66)||(30138476-30138523)
[»] chr8 (18 HSPs)
chr8 (53-254)||(23660964-23661166)
chr8 (18-254)||(17460390-17460647)
chr8 (102-254)||(20454968-20455120)
chr8 (120-254)||(20455722-20455856)
chr8 (120-254)||(20460700-20460834)
chr8 (52-222)||(22344789-22344958)
chr8 (52-222)||(22356449-22356618)
chr8 (54-211)||(29759634-29759791)
chr8 (125-253)||(20517241-20517370)
chr8 (125-216)||(42265777-42265868)
chr8 (125-222)||(17150394-17150491)
chr8 (53-119)||(20517355-20517421)
chr8 (18-70)||(20454932-20454984)
chr8 (18-70)||(20455689-20455741)
chr8 (18-70)||(20460667-20460719)
chr8 (18-100)||(42265872-42265954)
chr8 (56-120)||(17150475-17150539)
chr8 (26-70)||(29759564-29759608)
[»] chr1 (6 HSPs)
chr1 (58-254)||(13880719-13880914)
chr1 (56-216)||(22350340-22350500)
chr1 (31-211)||(15861830-15862010)
chr1 (130-235)||(44822333-44822438)
chr1 (53-211)||(22366710-22366868)
chr1 (19-70)||(13880923-13880974)
[»] scaffold0230 (1 HSPs)
scaffold0230 (18-235)||(6997-7214)
[»] scaffold0112 (2 HSPs)
scaffold0112 (53-254)||(23306-23507)
scaffold0112 (18-59)||(23522-23563)
[»] scaffold0037 (2 HSPs)
scaffold0037 (102-254)||(82715-82867)
scaffold0037 (18-70)||(82679-82731)
[»] scaffold0007 (4 HSPs)
scaffold0007 (27-235)||(17457-17666)
scaffold0007 (59-216)||(159090-159248)
scaffold0007 (74-253)||(19045-19225)
scaffold0007 (31-70)||(159257-159296)
[»] scaffold0308 (1 HSPs)
scaffold0308 (18-216)||(13026-13224)
[»] scaffold0116 (1 HSPs)
scaffold0116 (27-216)||(35732-35921)
[»] scaffold0598 (1 HSPs)
scaffold0598 (31-222)||(2917-3108)
[»] scaffold0439 (1 HSPs)
scaffold0439 (53-254)||(11908-12109)
[»] scaffold0156 (1 HSPs)
scaffold0156 (59-201)||(16327-16469)
[»] scaffold0013 (1 HSPs)
scaffold0013 (61-222)||(7511-7672)
[»] scaffold0877 (1 HSPs)
scaffold0877 (152-254)||(2210-2312)
[»] scaffold0023 (2 HSPs)
scaffold0023 (125-235)||(163074-163184)
scaffold0023 (55-119)||(163025-163089)
[»] scaffold0180 (1 HSPs)
scaffold0180 (125-216)||(28597-28688)
[»] scaffold0032 (1 HSPs)
scaffold0032 (56-222)||(116539-116705)
[»] scaffold0317 (1 HSPs)
scaffold0317 (109-222)||(12975-13088)
[»] scaffold1800 (1 HSPs)
scaffold1800 (125-253)||(344-473)
[»] scaffold0256 (2 HSPs)
scaffold0256 (18-119)||(2311-2412)
scaffold0256 (125-186)||(2265-2326)
[»] scaffold0342 (1 HSPs)
scaffold0342 (49-120)||(1137-1208)
[»] scaffold1164 (2 HSPs)
scaffold1164 (130-211)||(1149-1230)
scaffold1164 (53-120)||(1093-1160)


Alignment Details
Target: scaffold1439 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 709 - 945
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  709 aaaattacaaatattttccagatttgcctgccagaaaatcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgggggccgattt 808  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||| |||||||  ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  809 tgggaactcggtagccgattttgagcttcacagcagttcgaaaatcagtttaacaatgcgtttttcacttaagaatcacttttatttcactagactcaaa 908  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||| ||||||||||||||||||||||||||||    
T  909 cacaaactcccaaatttgttagaaaacttaacctatg 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 12611544 - 12611780
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||    
T  12611544 aaaattacgaatattttccagatttgcctgccagaaaatcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggtggccaattt 12611643  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||||||||| | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  12611644 tggaaactcagtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcgctctgatttcactagactcaaa 12611743  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12611744 cacaaactcccaaatttgttagaaaacttaacctatg 12611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 23802823 - 23802587
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||| | |||||||||    
T  23802823 aaaattacgaatattttccagatttgtctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcaaaaatcagtggccgattt 23802724  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23802723 tggaaactcggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgtgtttttcacttaagaatcactcttaattcactagactcaaa 23802624  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    ||||||||  |||||||||||| ||||||||||||||    
T  23802623 cacaaactctcaaatttgttaggaaacttaacctatg 23802587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 51463426 - 51463211
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||           
T  51463426 aaaattacgaatattttccagatttgcctgccagaaaatcggcggccgattttcgtcgaaccaaagctagaaaatcagctgagaaatcggggg------- 51463334  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
                  |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51463333 --------------ccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcgctcttatttcactagactcaaa 51463248  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||| |||||||||||||||||||| |||||||    
T  51463247 cacaaactcccaaatttgttagaaaactttacctatg 51463211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 15447776 - 15447560
Alignment:
Q  17 aaaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgatt 116  Q
    ||||||||  |||||| |||||||||||||  ||||||||||| ||||||||||||| ||||||||||| |||||| ||||||| |||||| |||||||     
T  15447776 aaaaattatgaatattgtccagatttgcctaacagaaaatcggtggccgattttcgttgaaccaaagctggaaaatcagctcagaaatcggtggccgat- 15447678  T
Q  117 ttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
                        ||| ||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15447677 --------------------tttaagcttcacagcagttcaaaaatcagattaacaatgcgtttttcacttaagaatcactcttaattcactagactcaa 15447598  T
Q  217 acacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||||  |||||||||||| ||||||||||||||    
T  15447597 acacaaactctcaaatttgttagcaaacttaacctatg 15447560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 15344675 - 15344804
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 224  Q
    |||| |||||||||||||||||| |  |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15344675 tcggtggccgattttgagcttcacaacagttcaaaaatcagattaacaatgtgtttttcacttaagaatcactcttaattcactagactcaaatacaaac 15344774  T
Q  225 taccaaatttgttagaaaacttaacctatg 254  Q
    | ||||||||||||| ||||||||||||||    
T  15344775 tcccaaatttgttaggaaacttaacctatg 15344804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 14951454 - 14951622
Alignment:
Q  54 aatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtag 153  Q
    |||||| |||||||||||||||||||||| || |||||| ||||||| |||||| |||||||||||| || || | |||||||||||  ||||| || ||    
T  14951454 aatcggtggccgattttcgtcgaaccaaaactggaaaatcagctcagaaatcggtggccgattttggcaaatcaggggccgattttggacttcacagcag 14951553  T
Q  154 ttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||||||||||| |||||||||| ||||||||  || |||||||||||  |||||||| ||||| ||||    
T  14951554 ttcaaaaatcagcttaacaatgcatttttcacccaaaaatcactcttaaatcactagattcaaatacaa 14951622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 55377155 - 55377066
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    |||||||||||||  || ||||||||||| |||||||||||||||||||||| || |||||| ||||||| |||||| ||||||||||||    
T  55377155 ttttccagatttgtttgacagaaaatcggtggccgattttcgtcgaaccaaaactggaaaatcagctcagaaatcggtggccgattttgg 55377066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 213
Target Start/End: Complemental strand, 55377082 - 55376994
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagact 213  Q
    |||| ||||||||||| |||||| || |||| ||||||||| |||||||||||||||| ||| ||||||||||||||  ||||||||||    
T  55377082 tcggtggccgattttgggcttcatagcagtttaaaaatcagcttaacaatgcgtttttgactcaagaatcactcttaaatcactagact 55376994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 15344624 - 15344690
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    |||||||||||||||||| || ||||||||||| |||||| ||||||| |||||| |||||||||||    
T  15344624 aaatcgggggccgatttttgttgaaccaaagctggaaaatcagctcagaaatcggtggccgattttg 15344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 13044028 - 13043971
Alignment:
Q  178 tttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttg 235  Q
    |||||||| |||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  13044028 tttttcacctaagaatcactcttaaatcactaaactcaaacacaaactcccaaatttg 13043971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 15344568 - 15344620
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||| |||||||||||||||||||||  |||||||||| ||||||||||    
T  15344568 aaaattacgaatattttccagatttgcctgatagaaaatcggtggccgatttt 15344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 24152803 - 24152567
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  24152803 aaaattacgaatattttccagatttgcctgccagaaaatcggtggccgatttttgtcgaaccaaagctagaaaatcagctcagaaatcggtggccgattt 24152704  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  24152703 tggaaactcgggggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgttattcacttaagaatcactcttaattcactagactcaaa 24152604  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    ||||||||  |||||||||||  ||||||||||||||    
T  24152603 cacaaactctcaaatttgttatgaaacttaacctatg 24152567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 54 - 254
Target Start/End: Original strand, 50243482 - 50243682
Alignment:
Q  54 aatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtag 153  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |  ||    
T  50243482 aatcgcgggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgggggccgatcttggaaactcggtggccgattttgagcttcacaacag 50243581  T
Q  154 ttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctat 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||| |||||||||||||    
T  50243582 ttcaaaaatcagtttaacaatgcgtttttcacttaacaatcactcttaattcactagactaaaacacaaactctcaaatttgttaggaaacttaacctat 50243681  T
Q  254 g 254  Q
    |    
T  50243682 g 50243682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 13522769 - 13522533
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||| | ||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||| |||||||||    
T  13522769 aaaattgcgaatattttccaaatttgactgacagaaaatcgggggccgattttcgtcgaaccaaaactaaaaaatcagctcagaaatcggtggccgattt 13522670  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||  ||||| | |||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||    
T  13522669 tgacaactctggggccgattttaagcttcatagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaaatcactagacgcgaa 13522570  T
Q  218 cacaa-actaccaaatttgttagaaaacttaacctat 253  Q
    ||||| ||| ||||||||| ||| |||| | ||||||    
T  13522569 cacaagactcccaaatttgataggaaacatcacctat 13522533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 61 - 254
Target Start/End: Original strand, 16643762 - 16643952
Alignment:
Q  61 ggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaa 160  Q
    ||||||||||| | ||| |||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||| || |||||||      
T  16643762 ggccgattttcattgaatcaaagctagaaaatcagctcagaaatcggtggccgattttggaaactcgggggccgattttgagcttcacagcagttcaa-- 16643859  T
Q  161 atcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
     ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  |||||||||||| || |||||||||||    
T  16643860 -tcagtttaacaatgcgtttttcatttaagaatcactcttaattcactagactcaaacacaaactctcaaatttgttaggaagcttaacctatg 16643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 30152634 - 30152802
Alignment:
Q  54 aatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtag 153  Q
    |||||| |||||||||||||||||||||| || |||||| ||||||| |||| | |||||||||||| || |||| ||||||||||| |||||| | |||    
T  30152634 aatcggtggccgattttcgtcgaaccaaaactggaaaataagctcagaaatcagtggccgattttgggaaatcggtggccgattttgggcttcacaatag 30152733  T
Q  154 ttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||  |||||||| ||||| ||||    
T  30152734 ttcaaaaatcagcttaacaatgcgtttttcactcaaaaatcactcttaaatcactagattcaaatacaa 30152802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 6819910 - 6820039
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 224  Q
    |||| |||||||||||||||||| || |||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||  || ||||    
T  6819910 tcggtggccgattttgagcttcacagcagttcaaaaaccaatttaacaatgcgtttttcacttaagaatcactcttaattcactagactcagccaaaaac 6820009  T
Q  225 taccaaatttgttagaaaacttaacctatg 254  Q
    | ||||||||||||| ||||||||||||||    
T  6820010 tcccaaatttgttaggaaacttaacctatg 6820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 12952732 - 12952824
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    ||||||||||| |||| | || |||||||||| ||| |||| ||||||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  12952732 ggccgattttgggctttacagcagttcaaaaaacagcttaagaatgcgtttttcaattaagaatcactcttaaatcactagacttaaacacaa 12952824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 16643698 - 16643750
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  16643698 aaaattacgaatattttccagatttgcctgccagaaaatcggtggccgatttt 16643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 6819861 - 6819925
Alignment:
Q  55 atcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    |||| ||||||||||| |||||||||||||| |||||| ||||||| |||||| |||||||||||    
T  6819861 atcgtgggccgatttttgtcgaaccaaagctggaaaatcagctcagaaatcggtggccgattttg 6819925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 50243426 - 50243467
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgg 59  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  50243426 aaaattacgaatattttcaagatttgcctgccagaaaatcgg 50243467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 18456007 - 18455772
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  18456007 aaaattacgaatattttccagattttcctgccagaaaatcggtggccgattttagtcgaaccaaagctagaaaatcagctcagaaatcggtggccgattt 18455908  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    |||||||| || |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18455907 tggaaacttggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaa 18455808  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctat 253  Q
    ||||||||  |||||||||||| |||||||| ||||    
T  18455807 cacaaactctcaaatttgttaggaaacttaagctat 18455772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 66 - 254
Target Start/End: Original strand, 14273903 - 14274091
Alignment:
Q  66 attttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcag 165  Q
    |||||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  14273903 attttcgtcgaaccaaagttagaaaatcagctcagaaatcggtggccgattttggaaactcggtggccgattttgagcttcacagcagttcaaaaatcag 14274002  T
Q  166 tttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  14274003 tttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactcccaaatttgttaggaaacttaacctatg 14274091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 109 - 254
Target Start/End: Complemental strand, 13864690 - 13864545
Alignment:
Q  109 ggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcact 208  Q
    |||||||||||||||||| | |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  13864690 ggccgattttggaaactcagtggccgattttgagcttcacagcagttcaaaaatcagattaacaatgcgtttttcacttaggaatcactcttaattcact 13864591  T
Q  209 agactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    | ||||||||||||||| ||||||||||||| ||||||||||||||    
T  13864590 aaactcaaacacaaactcccaaatttgttaggaaacttaacctatg 13864545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 126105 - 126194
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| ||| || ||||||||||||    
T  126105 ttttccagattttcctgacagaaaatcggtggccgattttcgtcgaaccaaaactagaaaatcagctcagaaattggtggccgattttgg 126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 39291989 - 39291892
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||| ||||||||||| |||||| || |||| ||||||||| |||||||||||||||| ||||||||||||| ||||  |||||||||||||||||||    
T  39291989 tcggtggccgattttgggcttcacagcagtttaaaaatcagcttaacaatgcgtttttaacttaagaatcacgcttaaatcactagactcaaacacaa 39291892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 15978308 - 15978219
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactc 214  Q
    |||| |||| |||||| |||||| || |||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||    
T  15978308 tcggtggccaattttgggcttcacagcagttcaaaaatcagcttaacaatgcgtttttcatttaagaatcactcttaaatcactagactc 15978219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 126183 - 126264
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactaga 211  Q
    ||||||||||| |||||| || |||||||||||||| ||||| |||| ||||||||| || |||||||||||  ||||||||    
T  126183 ggccgattttgggcttcacagcagttcaaaaatcagcttaacgatgcatttttcactcaaaaatcactcttaaatcactaga 126264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 13864754 - 13864702
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||| ||||||||||||||||||||| |||||| |||| ||||||||||    
T  13864754 aaaattacgaatattttccagatttgcctggcagaaagtcggtggccgatttt 13864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 12192128 - 12192247
Alignment:
Q  103 atcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttat 202  Q
    ||||| |||||||||||| || | || ||||||||||  |||||| |  |||||||||||||| | |  ||||  |||||||||||  |||||||||||     
T  12192128 atcggtggccgattttggcaattgggtggccgattttcggcttcacaacagttcaaaaatcagctcacaaatgtttttttcacttattaatcactcttaa 12192227  T
Q  203 ttcactagactcaaacacaa 222  Q
     |||||| ||||||||||||    
T  12192228 ctcactaaactcaaacacaa 12192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 22501506 - 22501709
Alignment:
Q  32 tttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggagg 131  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22501506 tttccagattttcctgacagaaaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgggggccgattttggaaactcggagg 22501605  T
Q  132 ccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaa 231  Q
     ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  22501606 gcgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactcccaaa 22501705  T
Q  232 tttg 235  Q
    ||||    
T  22501706 tttg 22501709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 22509440 - 22509643
Alignment:
Q  32 tttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggagg 131  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22509440 tttccagattttcctgacagaaaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgggggccgattttggaaactcggagg 22509539  T
Q  132 ccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaa 231  Q
     ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  22509540 gcgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactcccaaa 22509639  T
Q  232 tttg 235  Q
    ||||    
T  22509640 tttg 22509643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 22173374 - 22173160
Alignment:
Q  32 tttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggagg 131  Q
    |||||||||||||||| |||||||||||        ||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||| ||    
T  22173374 tttccagatttgcctgacagaaaatcgg--------tttcgtcgaaccaaagctagaaaatcagctcagaaatcagtggccgattttggaaactcggtgg 22173283  T
Q  132 ccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaa 231  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22173282 ccgattttgagcttcacagcagttcaaaaatcagtttaacaatgagtttttcacttaagaatcactcttatttcactagactcaaacacaaactcccaaa 22173183  T
Q  232 tttgttagaaaacttaacctatg 254  Q
    ||||||||||||| |||||||||    
T  22173182 tttgttagaaaacataacctatg 22173160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 125 - 254
Target Start/End: Original strand, 7187166 - 7187295
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 224  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  7187166 tcgggggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcgctcttatttcactagactcaaagacaaac 7187265  T
Q  225 taccaaatttgttagaaaacttaacctatg 254  Q
    | ||||||||||||| |||||||| |||||    
T  7187266 tcccaaatttgttaggaaacttaatctatg 7187295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 31520922 - 31521046
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactacca 229  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  31520922 ggccgattttgagcttcacagcagttcaaaaatcagattaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactccca 31521021  T
Q  230 aatttgttagaaaacttaacctatg 254  Q
    |||| ||||| ||||||||||||||    
T  31521022 aattagttaggaaacttaacctatg 31521046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 18388549 - 18388458
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  18388549 tcggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 18388458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 7187115 - 7187181
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  7187115 aaatcggggaccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgggggccgattttg 7187181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 31520866 - 31520932
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||    
T  31520866 aaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcgatggccgattttg 31520932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 24884133 - 24884199
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    ||||||| ||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||||||    
T  24884133 aaatcggtggccgattttcgtcgaaccaaagcatgaaaatcagctcagaaatcaggggccgattttg 24884199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7187059 - 7187109
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatt 68  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  7187059 aaaattacgaatattttccagatttgcctaccagaaaatcggaggccgatt 7187109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 18388656 - 18388604
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||||||||||||||| ||||||||  ||||||||||| ||||||||||    
T  18388656 aaaattacaaatattttccaaatttgcctcacagaaaatcggtggccgatttt 18388604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 19819777 - 19819833
Alignment:
Q  26 aaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaa 82  Q
    |||||||||| | |||| |||| ||||||||| | ||||||||||||||||||||||    
T  19819777 aaatattttcaaaattttcctgacagaaaatcagtggccgattttcgtcgaaccaaa 19819833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 31520810 - 31520858
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccga 66  Q
    |||||||| ||||| || |||||||||||| ||||||||||| ||||||    
T  31520810 aaaattacgaatatgtttcagatttgcctgacagaaaatcggtggccga 31520858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 32 - 254
Target Start/End: Complemental strand, 1455 - 1233
Alignment:
Q  32 tttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggagg 131  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||| || ||    
T  1455 tttccagatttgcctgacagaaaatcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggtggccaattttggaaacttggtgg 1356  T
Q  132 ccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaa 231  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||    
T  1355 ccgattttgagcttcacagcagttcaaaaatcagtttaacgatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactctcaaa 1256  T
Q  232 tttgttagaaaacttaacctatg 254  Q
    |||||||| ||||||||||||||    
T  1255 tttgttaggaaacttaacctatg 1233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 12718 - 12919
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| || |||||| |||||||||||||||||||| |||||||||||||||||| || |    
T  12718 aaatcggcggccgattttcgtcgaaccaaagctagaaaatcagcttagaaatcggtggccgattttggaaactcggtggccgattttgagcttcacagca 12817  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12818 gtttaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactcccaaatttgttagaaaacttaaccta 12917  T
Q  253 tg 254  Q
    ||    
T  12918 tg 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 25619316 - 25619080
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  25619316 aaaattacgaatattttcaaaatttgcctgccagaaaatcggtggccgattttcgtcgaaccaaagctagaaaattagctaagaaatcggcggccgattt 25619217  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||||||||||| |||| ||||||||||||  |  ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  25619216 tggaaactcggtggccaattttgagcttcccaacagttcaaaaattagtttaacaatgcgttttccacttaagaatcactcttaattcactagactcaaa 25619117  T
Q  218 cacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    ||||||||  |||||||||||| ||||||||||||||    
T  25619116 cacaaactctcaaatttgttaggaaacttaacctatg 25619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 611432 - 611669
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaatt-agctcaggaatcgggggccgatt 116  Q
    |||||||  ||||||||||||||||||||| |||||||||||  ||||||||| |||||||||||||| ||||| | ||||||| |||||| || |||||    
T  611432 aaaattatgaatattttccagatttgcctgacagaaaatcggcagccgatttttgtcgaaccaaagctggaaaaatcagctcagaaatcggtggtcgatt 611531  T
Q  117 ttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  611532 ttggaaactcggtggccgattttgagcttcaccgcagttcaaaaataagattaacaatgcgtttttcacttaagaatcactcttaattcactagaatcaa 611631  T
Q  217 acacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  611632 acacaaactcccaaatttgttaggaaacttaacctatg 611669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 14978925 - 14978724
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |  |||||| |||||||||||||||||||| ||| |||||||||||||| || |    
T  14978925 aaatcgggggccgattttcgtcgaaccaaagctagaaaatcagcttataaatcggtggccgattttggaaactcggtggcagattttgagcttcacagca 14978826  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||  ||| |||||| | ||||||||||||    
T  14978825 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcaccagactcaaacacaaactctcaattttgttgggaaacttaaccta 14978726  T
Q  253 tg 254  Q
    ||    
T  14978725 tg 14978724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 18585311 - 18585528
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  18585311 aaaattatgaatattttccagatttgcctgacagaaaatcggtggccgattttcgtcgaaccaaagctggaaaatcagctcagaaatcggtggccgattt 18585410  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||| ||||||| |||||||||||||||||| |  |  ||||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  18585411 tggcaactcggtggccgattttgagcttcacaacaactcaaaaatcagattaacaatgcg-ttttcacttaagaatcactcttaaatcactagactcaaa 18585509  T
Q  218 cacaa-actaccaaatttg 235  Q
    ||||| ||| |||||||||    
T  18585510 cacaagactcccaaatttg 18585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 125 - 254
Target Start/End: Complemental strand, 20556344 - 20556215
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 224  Q
    |||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20556344 tcggtggccaattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 20556245  T
Q  225 taccaaatttgttagaaaacttaacctatg 254  Q
    | ||||||||||||||||||||||||||||    
T  20556244 tcccaaatttgttagaaaacttaacctatg 20556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 18982076 - 18982247
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||| ||||||||||||||||| || |||||| ||||||| |||||| ||||||||||||||||||  ||||||||||||||||||| || |    
T  18982076 aaatcgggggccaattttcgtcgaaccaaaactggaaaatcagctcagaaatcggtggccgattttggaaactcaaaggccgattttgagcttcacagca 18982175  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactag--actcaaacacaa 222  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||  ||||||||||||    
T  18982176 gttcaaaaattagcttaacaatgcgtttttctcttaagaatcactcttaattcactagttactcaaacacaa 18982247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 5834039 - 5833837
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcag-gaatcgggggccgattttggaaactcggaggccgattttgagcttcagagt 151  Q
    ||||||||||||||||||||||||||||||    | |||| |||||||  |||||| |||||| ||||||||||||| ||  ||||||| |||||| ||     
T  5834039 aaatcgggggccgattttcgtcgaaccaaaatcgggaaatcagctcagaaaatcggaggccga-tttggaaactcgggggaagattttgggcttcacagc 5833941  T
Q  152 agttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-actaccaaatttgttagaaaacttaacc 250  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||  |||||||| ||| | |||||||     
T  5833940 agttcaaaaattagtttaacaatgcgtttttcacttaagaatcactcttagatcactagactcaaacacaagactctcaaatttgataggacacttaaca 5833841  T
Q  251 tatg 254  Q
    ||||    
T  5833840 tatg 5833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 18398718 - 18398815
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||| ||||||||||| |||||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||    
T  18398718 tcgggggccgattttgggcttcatagcagttcaaaaatcagcttaacaatgcgtttttcactcaagaatcactcttaaatcactagacttaaacacaa 18398815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 18398667 - 18398734
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    ||||||||||||||||||| ||||||||||  | |||||| ||||||| |||||||||||||||||||    
T  18398667 aaatcgggggccgattttcatcgaaccaaaattggaaaatcagctcagaaatcgggggccgattttgg 18398734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 14978981 - 14978940
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgg 59  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  14978981 aaaattacgaatattttccagatttgcctgccagaaaatcgg 14978940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 20556452 - 20556404
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccga 66  Q
    |||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  20556452 aaaattacgaatattttccagatttgcttgccagaaaatcggggtccga 20556404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 5834094 - 5834043
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattt 69  Q
    |||||| | ||||||||||| |||| |||| |||||||||||||||||||||    
T  5834094 aaaattgcgaatattttccaaattttcctgacagaaaatcgggggccgattt 5834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 20556385 - 20556348
Alignment:
Q  63 ccgattttcgtcgaaccaaagctagaaaattagctcag 100  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  20556385 ccgattttcgttgaaccaaagctagaaaatcagctcag 20556348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 51 - 254
Target Start/End: Original strand, 72103 - 72306
Alignment:
Q  51 gaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagag 150  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||| |||||||||||||||||| ||    
T  72103 gaaaatcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggtggccgattttgggaactcggtggccgattttgagcttcacag 72202  T
Q  151 tagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacc 250  Q
     || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  72203 cagatcaaaaatcagtttaacaatgcatttttcacttaagaatcgctcttatttcactagactcaaacacaaactcccaaatttgttagaaaacttaacc 72302  T
Q  251 tatg 254  Q
    ||||    
T  72303 tatg 72306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 741 - 942
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||| ||      
T  741 aaatcgggggccaattttcgtcgaaccaaagctagaaaattagctcagaaatcggtggccaattttggaaactcggtggccgattttgagcttcacagct 840  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  841 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactctcaaatttgttaggaaacttaaccta 940  T
Q  253 tg 254  Q
    ||    
T  941 tg 942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 22412755 - 22412956
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||| |||| |||||||||||||||||| || |    
T  22412755 aaatcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggcggccgattttggaaaatcggtggccgattttgagcttcacagca 22412854  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  22412855 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagacttaaacacaaactctcaaatttgttagaaaacttaaccta 22412954  T
Q  253 tg 254  Q
    ||    
T  22412955 tg 22412956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 30138468 - 30138267
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||| |||||||| |||||||||||||||||| || |    
T  30138468 aaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcaaaaatcggtggccgattttgaaaactcgggggccgattttgagcttcacagca 30138369  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||| ||||||||||| | ||||||||||||    
T  30138368 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactattaattcattatactcaaacacaaactcccaaatttgtttggaaacttaaccta 30138269  T
Q  253 tg 254  Q
    ||    
T  30138268 tg 30138267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 17875705 - 17875906
Alignment:
Q  32 tttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggagg 131  Q
    ||||||||||| |||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||| ||    
T  17875705 tttccagattttcctgacagaaa-tcggtggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatgggtggccgattttggaaactcggtgg 17875803  T
Q  132 ccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaa 231  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| |||||    
T  17875804 ccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagattc-aacacaaactcccaaa 17875902  T
Q  232 tttg 235  Q
    ||||    
T  17875903 tttg 17875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 31456546 - 31456713
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||| || ||||||||||||||| || |||||||||||||||||| |  |    
T  31456546 aaatcgggggccgattttcgtctaaccaaagctagaaaatcagctcagaaatcgtgg-ccgattttggaaacttgggggccgattttgagcttcacaaca 31456644  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacaca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  31456645 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcacttttaattcactagactcaaacaca 31456713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 11342373 - 11342544
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||| |||||||||||||||||||||| || |||||| ||||||| |||||| |||||||||||| || |||| ||||||||||| |||||| | ||    
T  11342373 aaatcggtggccgattttcgtcgaaccaaaactggaaaataagctcagaaatcggtggccgattttggcaaatcggtggccgattttgggcttcacaata 11342472  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcact--taagaatcactcttatttcactagactcaaacacaa 222  Q
    ||||||||||| | ||||||||||||||||||||   || |||||||||||  |||||||| ||||| ||||    
T  11342473 gttcaaaaatccgcttaacaatgcgtttttcactcaaaaaaatcactcttaaatcactagattcaaatacaa 11342544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 120
Target Start/End: Complemental strand, 1168761 - 1168672
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||| || |||||| ||||||| |||||| ||||||||||||    
T  1168761 ttttccagatttgcctgacagaaaatcggcggccgattttcgtcgaaccaaaactggaaaatcagctcagaaatcggtggccgattttgg 1168672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 1168683 - 1168591
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    ||||||||||| |||||| || |||||||||||||| |||||||||||||| ||||| ||||||||||||||  |||||||| | ||||||||    
T  1168683 ggccgattttgggcttcacagcagttcaaaaatcagcttaacaatgcgtttgtcactcaagaatcactcttaaatcactagaattaaacacaa 1168591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 22412699 - 22412738
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatc 57  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  22412699 aaaattacgaatattttccagatttgcctgccagaaaatc 22412738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 30138523 - 30138476
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccga 66  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  30138523 aaaattacgaatattttc-agatttgcctgacagaaaatcgggggccga 30138476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 3e-75; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 23660964 - 23661166
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||| |||||||||||||||||| |  |    
T  23660964 aaatcggtggccgattttcgtcgaaccaaagctagaaaataagctcagaaatcggtggccgattttggcaactcgggggccgattttgagcttcacaaca 23661063  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactc-aaacacaaactaccaaatttgttagaaaacttaacct 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  23661064 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaaacacaaactctcaaatttgttaggaaacttaacct 23661163  T
Q  252 atg 254  Q
    |||    
T  23661164 atg 23661166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 17460647 - 17460390
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||    
T  17460647 aaaattatgaatattttccagatttgcctgacagaaaatcgggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggtggccgattt 17460548  T
Q  118 tggaaactcggaggccgattttg---------------------agcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcac 196  Q
    ||||||||||| |||||||||||                     ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  17460547 tggaaactcggtggccgattttggaaactcggtggccgattttgagcttcacagcagttcaaaaattagtttaacaatgcgtttttcacttaagaatcac 17460448  T
Q  197 tcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    | ||| |||||||||||||||||||||||  |||||||||| | ||||||||||||||    
T  17460447 tattaattcactagactcaaacacaaactctcaaatttgtttggaaacttaacctatg 17460390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 102 - 254
Target Start/End: Original strand, 20454968 - 20455120
Alignment:
Q  102 aatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactctta 201  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20454968 aatcggtggccgattttggaaactcggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactctta 20455067  T
Q  202 tttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
     ||| ||||||||||||||||||| | ||||||||||| | ||||||||||||    
T  20455068 attccctagactcaaacacaaactccaaaatttgttaggacacttaacctatg 20455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 20455722 - 20455856
Alignment:
Q  120 gaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaaca 219  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20455722 gaaaatcggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaaca 20455821  T
Q  220 caaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||| | ||||||||||| ||||||||||||||    
T  20455822 caaactccaaaatttgttaggaaacttaacctatg 20455856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 120 - 254
Target Start/End: Original strand, 20460700 - 20460834
Alignment:
Q  120 gaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaaca 219  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20460700 gaaaatcggtggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaaca 20460799  T
Q  220 caaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||| | ||||||||||| ||||||||||||||    
T  20460800 caaactccaaaatttgttaggaaacttaacctatg 20460834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 22344789 - 22344958
Alignment:
Q  52 aaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagt 151  Q
    |||||||| ||||||||||| |||||||||| || |||||| ||||||| |||||| || ||||||||| ||||||| ||||||||| |||||||| |||    
T  22344789 aaaatcggtggccgattttcatcgaaccaaaactggaaaatcagctcagaaatcggtggtcgattttggcaactcggtggccgattt-gagcttcacagt 22344887  T
Q  152 agttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22344888 agttcaaaaatcggcttaacaatgcgtttttcacttaagaatcactcttaaatcactagactcaaacacaa 22344958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 22356449 - 22356618
Alignment:
Q  52 aaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagt 151  Q
    |||||||| ||||||||||| |||||||||| || |||||| ||||||| |||||| || ||||||||| ||||||| ||||||||| |||||||| |||    
T  22356449 aaaatcggtggccgattttcatcgaaccaaaactggaaaatcagctcagaaatcggtggtcgattttggcaactcggtggccgattt-gagcttcacagt 22356547  T
Q  152 agttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22356548 agttcaaaaatcggcttaacaatgcgtttttcacttaagaatcactcttaaatcactagactcaaacacaa 22356618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 29759634 - 29759791
Alignment:
Q  54 aatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtag 153  Q
    |||||| |||||||||||||||||||||| || |||||| || |||| |||||| |||||||||||| || |||| ||||||||||| ||||||  ||||    
T  29759634 aatcggtggccgattttcgtcgaaccaaaactggaaaatcagatcagaaatcggaggccgattttggcaaatcgggggccgattttgggcttcactgtag 29759733  T
Q  154 ttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactaga 211  Q
    |||||||||||| |||||||||||||||||||| || |||||||||||  ||||||||    
T  29759734 ttcaaaaatcagcttaacaatgcgtttttcactcaaaaatcactcttaaatcactaga 29759791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 253
Target Start/End: Complemental strand, 20517370 - 20517241
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-a 223  Q
    |||| |||||||||||||||| | |  |||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  20517370 tcgggggccgattttgagctttacaacagttcaaaaatcagcttaacaatgcgtttttcacttaagaatcactcttaaatcactagactcaaacacaaga 20517271  T
Q  224 ctaccaaatttgttagaaaacttaacctat 253  Q
    || ||||||||| ||| |||| | ||||||    
T  20517270 ctcccaaatttgataggaaacatcacctat 20517241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 42265868 - 42265777
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  42265868 tcgggggccgattttgagcttcacaatagttcaaaaatcggtttaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 42265777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 17150491 - 17150394
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||| ||||||||||| |||||  || |||||||||||||| |||||||||||||||||||| || |||||||||||  |||||||| ||||| ||||    
T  17150491 tcggtggccgattttgggcttcccagaagttcaaaaatcagattaacaatgcgtttttcactcaaaaatcactcttaaatcactagattcaaatacaa 17150394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 20517421 - 20517355
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    ||||||| |||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||    
T  20517421 aaatcggtggccgattttcgtcgaaccaaaactggaaaatcagctcagaaatcgggggccgattttg 20517355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20454932 - 20454984
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  20454932 aaaattacgaatattttccagatttgcctgtcagaaaatcggtggccgatttt 20454984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20455689 - 20455741
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||| ||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  20455689 aaaagtacgaatatttcccagatttgcctgccagaaaatcggtggccgatttt 20455741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 20460667 - 20460719
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||| ||| ||||||| ||||||||||||||||||||||||| ||||||||||    
T  20460667 aaaagtacgaatatttcccagatttgcctgccagaaaatcggtggccgatttt 20460719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 42265954 - 42265872
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcag 100  Q
    |||||| | ||||||||||| ||||||||  || |||||||| || ||||||||||| ||||||| || |||||| |||||||    
T  42265954 aaaattgcgaatattttccaaatttgcctcacaaaaaatcggtggtcgattttcgtcaaaccaaaactggaaaatcagctcag 42265872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 17150539 - 17150475
Alignment:
Q  56 tcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    ||||||||| ||||||||||||||||| || |||| | ||||||  |||||| ||||||||||||    
T  17150539 tcgggggccaattttcgtcgaaccaaaactggaaattcagctcaaaaatcggtggccgattttgg 17150475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 29759564 - 29759608
Alignment:
Q  26 aaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||| ||||||||||||||||| ||||||||||  ||||||||||    
T  29759564 aaatgttttccagatttgcctgacagaaaatcgatggccgatttt 29759608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 58 - 254
Target Start/End: Complemental strand, 13880914 - 13880719
Alignment:
Q  58 gggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttca 157  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||| ||| || ||||||||||||||| || ||||||    
T  13880914 gggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggaggccgattttggcaacacgggggacgattttgagcttcacagcagttca 13880815  T
Q  158 aaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  13880814 aaaatcagtttaacaatgtgtttttcacttaagaatcactcttaattcactagactc-aacacaaactctcaaatttgttaggaaacttaacctatg 13880719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 22350340 - 22350500
Alignment:
Q  56 tcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagtt 155  Q
    |||||| ||||||||||| |||||||| || |||||| ||||||| |||||| |||||||||||| ||||||| |||||||||||||||||| |||||||    
T  22350340 tcggggaccgattttcgttgaaccaaaactggaaaatcagctcagaaatcggtggccgattttggcaactcgggggccgattttgagcttcacagtagtt 22350439  T
Q  156 caaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  22350440 caaaaatctgtttaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 22350500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 15862010 - 15861830
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggag 130  Q
    |||||||||||| |||| ||||||||||| |||||||||||||| ||||||| ||  ||||| ||||||| |||||| |||||||||||| || |||| |    
T  15862010 ttttccagattttcctgacagaaaatcggtggccgattttcgtcaaaccaaaactgaaaaatcagctcagaaatcggtggccgattttggcaaatcggtg 15861911  T
Q  131 gccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactaga 211  Q
    |||||||||| |||||| || |||||||||||||| |||||||||| ||||||||| || |||||||||||  ||||||||    
T  15861910 gccgattttgggcttcacagcagttcaaaaatcagcttaacaatgcatttttcactcaaaaatcactcttaaatcactaga 15861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 44822438 - 44822333
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactacca 229  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||    
T  44822438 ggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaattcactggactcaaacacaaactccca 44822339  T
Q  230 aatttg 235  Q
    ||||||    
T  44822338 aatttg 44822333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 211
Target Start/End: Original strand, 22366710 - 22366868
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||||| |||||||||||||||||||| || |||||| ||||||| ||| || ||||||| |||| || |||| |||| |||||| |||||| || |    
T  22366710 aaatcggggaccgattttcgtcgaaccaaaactggaaaatcagctcagaaattggtggccgatattggcaaatcggtggccaattttgggcttcacagca 22366809  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactaga 211  Q
    ||||||||||||| |||||||||| |||||| || || |||||||||||  ||||||||    
T  22366810 gttcaaaaatcagcttaacaatgcatttttcgctcaaaaatcactcttaaatcactaga 22366868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 13880974 - 13880923
Alignment:
Q  19 aaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  13880974 aaattacgaatattttccatatttgcctgccagaaaatcgggggccgatttt 13880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 7214 - 6997
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  7214 aaaattatgaatattttccagatttgcctgacagaaaatcggtggccgattttcgtcgaaccaaagctggaaaatcagctcagaaatcggtggccgattt 7115  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaa 217  Q
    ||| ||||||| |||||||||||||||||| |  |  ||||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  7114 tggcaactcggtggccgattttgagcttcacaacaactcaaaaatcagattaacaatgcg-ttttcacttaagaatcactcttaaatcactagactcaaa 7016  T
Q  218 cacaa-actaccaaatttg 235  Q
    ||||| ||| |||||||||    
T  7015 cacaagactcccaaatttg 6997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 53 - 254
Target Start/End: Complemental strand, 23507 - 23306
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||| |||||||||||||||||| | || ||||||||||||| | || |    
T  23507 aaatcgggggccgattttcgtcgaatcaaaactagaaaatcagctcagaaatcggtggccgattttggaaactcagcggtcgattttgagcttgacagca 23408  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaaccta 252  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||  |||||| ||||| ||||||||||||    
T  23407 gttcaaaaatcagttttacaatgcgttttttacttaagaatcactcttaattcagtagactcaaacacaaactctcaaattcgttaggaaacttaaccta 23308  T
Q  253 tg 254  Q
    ||    
T  23307 tg 23306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 23563 - 23522
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgg 59  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  23563 aaaattacgaatattttccagattttcctgccagaaaatcgg 23522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 102 - 254
Target Start/End: Original strand, 82715 - 82867
Alignment:
Q  102 aatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactctta 201  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  82715 aatcggtggccgattttgggaactcggtgtccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactctta 82814  T
Q  202 tttcactagactcaaacacaaactaccaaatttgttagaaaacttaacctatg 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  82815 tttcactagactcaaacacaaactcccaaatttgttagaaaacttaacgtatg 82867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 82679 - 82731
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||||||||    
T  82679 aaaattacgaatattttccagatttgcctatcagaaaatcggtggccgatttt 82731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 118; Significance: 3e-60; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 17666 - 17457
Alignment:
Q  27 aatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactc 126  Q
    ||||||||||| |||| |||| ||||||||||| ||||||||||||| |||||||| || | |||| ||||||| |||||| |||||||||||| |||||    
T  17666 aatattttccaaattttcctgacagaaaatcggcggccgattttcgttgaaccaaaactggcaaatcagctcagaaatcggtggccgattttggcaactc 17567  T
Q  127 ggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-act 225  Q
    || |||||||||||||||||| |  |||||||||||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| |||    
T  17566 ggcggccgattttgagcttcacaacagttcaaaaatcagcttaacaatgtgtttttctcttaagaatcactcttaattcactagactcaaacacaagact 17467  T
Q  226 accaaatttg 235  Q
     |||||||||    
T  17466 cccaaatttg 17457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 159248 - 159090
Alignment:
Q  59 ggggccgattttcgtcgaaccaaagctagaaaattagctcaggaa-tcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttca 157  Q
    ||||||||||||||||||||||||||| ||| || ||||||| || |||| |||||||||||||||||||| |||||||||||||||||| || ||||||    
T  159248 ggggccgattttcgtcgaaccaaagctggaacatcagctcagaaaatcggtggccgattttggaaactcgggggccgattttgagcttcacagcagttca 159149  T
Q  158 aaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  159148 aaaatcagtttaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 159090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 74 - 253
Target Start/End: Complemental strand, 19225 - 19045
Alignment:
Q  74 cgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaa 173  Q
    ||||||||| || |||||| || |||| |||||| |||||||||||| ||||||| ||||||||||||| |||| |  |||||||||||||| |||||||    
T  19225 cgaaccaaaactggaaaatcaggtcagaaatcggtggccgattttggcaactcggtggccgattttgagtttcacaacagttcaaaaatcagcttaacaa 19126  T
Q  174 tgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-actaccaaatttgttagaaaacttaacctat 253  Q
    || ||||||| |||||||||||||||||  ||||||||||||||  ||| ||| ||||||||| ||| |||| | ||||||    
T  19125 tgtgtttttctcttaagaatcactcttaaatcactagactcaaagtcaagactcccaaatttgataggaaacatcacctat 19045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 159296 - 159257
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgatttt 70  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  159296 ttttccagatttgcctgacacaaaatcgggggccgatttt 159257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 13026 - 13224
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||| | ||||||||||| ||||||||  ||||||||||| ||||||| |||||||||||||| || |||||| ||||||| |||||||| | |||||    
T  13026 aaaattgcgaatattttccaaatttgcctcacagaaaatcggtggccgatgttcgtcgaaccaaaactggaaaatcagctcagaaatcggggactgattt 13125  T
Q  118 tggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    ||| ||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||    
T  13126 tggcaactcgggggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttgacttaagaatcactcttggatcactagactcaa 13224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 35921 - 35732
Alignment:
Q  27 aatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactc 126  Q
    ||||||||||| |||| |||  ||||||||||| ||||||||||||| ||||||||  | |||||| ||||||| |||||||||||||||||||||| ||    
T  35921 aatattttccaaattttcctcacagaaaatcggtggccgattttcgtggaaccaaaattggaaaatcagctcagcaatcgggggccgattttggaaattc 35822  T
Q  127 ggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    || |||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||    
T  35821 gggggccgattttgagcttcacagcagttcaaaaatcagtctaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 35732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 2917 - 3108
Alignment:
Q  31 ttttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggag 130  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||  | |||||| ||||||| |||||| ||| |||||||| || |||| |    
T  2917 ttttccagatttgcctgacagaaaatcgggggccgatttttgtcgaaccaaaattggaaaatcagctcagaaatcggtggctgattttggcaattcggtg 3016  T
Q  131 gccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
     ||||||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||  |||||||||| ||||||||    
T  3017 accgattttgggcttcacagcagttcaaaaatcagtttaacaatgcatttttcacttaagaataactcttaaatcactagacttaaacacaa 3108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 53 - 254
Target Start/End: Original strand, 11908 - 12109
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagta 152  Q
    |||||||||||||||||||||||||| ||| || |||||| ||||||| |||||| |||| ||||||  ||||||| ||||||||| |||||||| |  |    
T  11908 aaatcgggggccgattttcgtcgaacaaaaactggaaaatcagctcagaaatcggtggccaattttgacaactcgggggccgattt-gagcttcacaaca 12006  T
Q  153 gttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-actaccaaatttgttagaaaacttaacct 251  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||| ||| |||| | ||||    
T  12007 tttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttaaatcactagactcaaacacaagactcccaaatttgataggaaacatcacct 12106  T
Q  252 atg 254  Q
    |||    
T  12107 atg 12109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 16327 - 16469
Alignment:
Q  59 ggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaa 158  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||| || | | |||||||||||||||| |  |||||||    
T  16327 ggggccgattttcgtcgaaccaaagctagaaaatcagctcagaaatcggcggctgattttggaaattcagtgaccgattttgagcttcacaacagttcaa 16426  T
Q  159 aaatcagtttaacaatgcgtttttcacttaagaatcactctta 201  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16427 aaatcagtttaacaatgcgtttttcacttaagaatcactctta 16469  T

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Target: scaffold0013 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 7672 - 7511
Alignment:
Q  61 ggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaa 160  Q
    |||||||||| ||||||||||| || |||||| ||||||  |||||| |||| ||||||| || |||| |||| |||||| |||||| ||||||||||||    
T  7672 ggccgatttttgtcgaaccaaaactggaaaatcagctcaaaaatcggtggcccattttggcaattcggtggcccattttgggcttcacagtagttcaaaa 7573  T
Q  161 atcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
     |||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  7572 ttcagcttaacaatgcgtttttcacttaagaatcactcttaaatcactagactcaaacacaa 7511  T

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Target: scaffold0877 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 152 - 254
Target Start/End: Complemental strand, 2312 - 2210
Alignment:
Q  152 agttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaactaccaaatttgttagaaaacttaacct 251  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||    
T  2312 agttcaaaaataagtttaacaatgcgtttttcacttaagaatcactcttaattcactagactcaaacacaaactctcaaatttgttaggaaacttaacct 2213  T
Q  252 atg 254  Q
    |||    
T  2212 atg 2210  T

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Target: scaffold0023 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 163074 - 163184
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaaac 224  Q
    |||| |||||||||||||||||| ||  |||||||||||||||||||||||| |||||||| |||||||||||||||  |||||| ||||||||||||||    
T  163074 tcggtggccgattttgagcttcacagctgttcaaaaatcagtttaacaatgcctttttcacctaagaatcactcttaaatcactaaactcaaacacaaac 163173  T
Q  225 taccaaatttg 235  Q
    | |||||||||    
T  163174 tcccaaatttg 163184  T

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Target: scaffold0023; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 163025 - 163089
Alignment:
Q  55 atcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttg 119  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  163025 atcggtggccaattttcgtcgaaccaaagctagaaaatgagctcagaaatcggtggccgattttg 163089  T

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Target: scaffold0180 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 28688 - 28597
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaa 216  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  28688 tcgggggccgattttgagcttcacagcagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttggatcactagactcaa 28597  T

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Target: scaffold0032 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 116705 - 116539
Alignment:
Q  56 tcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttggaaactcggaggccgattttgagcttcagagtagtt 155  Q
    |||| |||||||||| ||||||||||| || |||||| ||||||| ||| |||||||||||| |  || |||| ||||||||||| |||||| |  ||||    
T  116705 tcggtggccgatttttgtcgaaccaaaactggaaaatcagctcagaaattgggggccgatttcgacaattcggtggccgattttgggcttcacaacagtt 116606  T
Q  156 caaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa 222  Q
    |||||||||| |||||||||||||| |||| |||||| |||| |||  |||||||||| ||| ||||    
T  116605 caaaaatcagcttaacaatgcgtttctcacgtaagaagcacttttaaatcactagacttaaatacaa 116539  T

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Target: scaffold0317 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 13088 - 12975
Alignment:
Q  109 ggccgattttggaaactcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcact 208  Q
    |||||||||||  || |||| ||||||||||| |||||| || |||||||||||||| ||||||||| |||||||||||||||||||||||||  |||||    
T  13088 ggccgattttgacaattcggtggccgattttgggcttcacagcagttcaaaaatcagcttaacaatgtgtttttcacttaagaatcactcttaaatcact 12989  T
Q  209 agactcaaacacaa 222  Q
    ||| ||||||||||    
T  12988 agaatcaaacacaa 12975  T

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Target: scaffold1800 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 253
Target Start/End: Original strand, 344 - 473
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactagactcaaacacaa-a 223  Q
    |||| |||||| ||||||||||| || | || |||||| || ||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||| |    
T  344 tcggtggccgactttgagcttcacagcaattaaaaaattagcttaacaatgagtttttcacttaagaatcactcttaaatcacttgactcaaacacaaga 443  T
Q  224 ctaccaaatttgttagaaaacttaacctat 253  Q
    || ||||||||| |||||||| | ||||||    
T  444 ctcccaaatttgatagaaaacattacctat 473  T

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Target: scaffold0256 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 2412 - 2311
Alignment:
Q  18 aaaattacaaatattttccagatttgcctgccagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattt 117  Q
    |||||||  |||||||||||||||| |||| |||||||||| ||||||||||||||||| | |||| | |||||| ||||||| |||||| |||||||||    
T  2412 aaaattatgaatattttccagattttcctgacagaaaatcgtgggccgattttcgtcgatctaaagttggaaaatcagctcagaaatcggtggccgattt 2313  T
Q  118 tg 119  Q
    ||    
T  2312 tg 2311  T

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Target: scaffold0256; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 2326 - 2265
Alignment:
Q  125 tcggaggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcact 186  Q
    |||| |||||||||||||||||| |  |||||||||||||  |||| |||||||||||||||    
T  2326 tcggtggccgattttgagcttcacatcagttcaaaaatcaacttaataatgcgtttttcact 2265  T

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Target: scaffold0342 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 1208 - 1137
Alignment:
Q  49 cagaaaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    |||||||||||||||||||||||||||||| ||| || |||||| ||||||| |||||| ||||||||||||    
T  1208 cagaaaatcgggggccgattttcgtcgaacaaaaactggaaaatcagctcagaaatcggcggccgattttgg 1137  T

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Target: scaffold1164 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 1149 - 1230
Alignment:
Q  130 ggccgattttgagcttcagagtagttcaaaaatcagtttaacaatgcgtttttcacttaagaatcactcttatttcactaga 211  Q
    ||||||||||| |||||| || |||||||||||||| ||| |||||||||||||||| || |||||||||||  ||||||||    
T  1149 ggccgattttgggcttcacagcagttcaaaaatcagcttagcaatgcgtttttcactcaaaaatcactcttaaatcactaga 1230  T

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Target: scaffold1164; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 1093 - 1160
Alignment:
Q  53 aaatcgggggccgattttcgtcgaaccaaagctagaaaattagctcaggaatcgggggccgattttgg 120  Q
    ||||||||||||||||||||||||||||||  | |||||| ||||||| |||||  ||||||||||||    
T  1093 aaatcgggggccgattttcgtcgaaccaaaattggaaaatcagctcagaaatcgatggccgattttgg 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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