View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10305_low_7 (Length: 451)
Name: NF10305_low_7
Description: NF10305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10305_low_7 |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 410; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 18 - 442
Target Start/End: Original strand, 11402666 - 11403091
Alignment:
| Q |
18 |
cacaagactcatcagtgttttgatatgaattttctgccacgtttgcctgatgttgtatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaa |
117 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11402666 |
cacaagactcattagtgttttgatatgaattttctgccacgtttgcctgatgttgtatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaa |
11402765 |
T |
 |
| Q |
118 |
caactgtaatttggtctctcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctcttgaaattattgtct |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11402766 |
caactgtaatttggtctctcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctcttgaaattattgtct |
11402865 |
T |
 |
| Q |
218 |
ctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacctt |
317 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11402866 |
ctccattgatcgaagtttccacgtcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacctt |
11402965 |
T |
 |
| Q |
318 |
tactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatattttgtt |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11402966 |
tactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatattttgtt |
11403065 |
T |
 |
| Q |
418 |
ga-atgactttcgatacatcctttgc |
442 |
Q |
| |
|
|| ||||||||||||||||||||||| |
|
|
| T |
11403066 |
gacatgactttcgatacatcctttgc |
11403091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 419
Target Start/End: Complemental strand, 11402376 - 11402306
Alignment:
| Q |
349 |
gttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatattttgttga |
419 |
Q |
| |
|
|||||||| |||||| || ||||||| ||||||||||||| |||| || ||||||| ||||||| |||||| |
|
|
| T |
11402376 |
gttattgaagttcacttgacttttcaaggcttcctcctttgctttctctgtcttctgcaatattctgttga |
11402306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 37 - 412
Target Start/End: Complemental strand, 35842251 - 35841855
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
35842251 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
35842152 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
35842151 |
tcttggttgtaacaacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggatggattgaaattgttgtaattgttgt |
35842052 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |||||| | |
|
|
| T |
35842051 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaattgtcacgagc |
35841952 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35841951 |
tctggcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttctccaatatt |
35841855 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 37 - 412
Target Start/End: Original strand, 12528771 - 12529167
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
12528771 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
12528870 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
12528871 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggattgattgaaattgttgtaattgttgt |
12528970 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || || ||||||||||||||||||||| |||||| |
|
|
| T |
12528971 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaacttcctcttcctccattgttgaaattgtcacgagt |
12529070 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
12529071 |
tctgccttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtattctccaatatt |
12529167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 12643962 - 12643795
Alignment:
| Q |
35 |
ttttgatatgaattttctgccacgtttgcctgatgtt-gtatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtc |
133 |
Q |
| |
|
||||||||||||||||||| || |||| | |||||| |||| ||||||| |||| |||||||| ||| ||| | ||| |||||||| ||||||| || |
|
|
| T |
12643962 |
ttttgatatgaattttctggcatgttttctcgatgtttgtatctgcaatcagctgttttgtgcccaaacttttcatagtggaaacaactataatttgttc |
12643863 |
T |
 |
| Q |
134 |
tctcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcct |
201 |
Q |
| |
|
||||||| |||||| | ||| || || || || | |||||| ||| |||||||| ||||||||||||| |
|
|
| T |
12643862 |
tctcttggttgtaatatccttttcctttgtcatgattggtataactaaaattgtctccacctcttcct |
12643795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 37 - 412
Target Start/End: Original strand, 42912884 - 42913280
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
42912884 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
42912983 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
42912984 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggatggattgaaattgttgtaattgttgt |
42913083 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |||||| | |
|
|
| T |
42913084 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaattgtcacgagc |
42913183 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42913184 |
tctggcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttctccaatatt |
42913280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 207 - 419
Target Start/End: Complemental strand, 42300933 - 42300721
Alignment:
| Q |
207 |
aattattgtctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaatt |
306 |
Q |
| |
|
|||| |||||||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |
|
|
| T |
42300933 |
aattgttgtctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaatt |
42300834 |
T |
 |
| Q |
307 |
atcacgacctttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctcc |
406 |
Q |
| |
|
|||||| || | || ||| ||| || ||||||| ||| ||| ||||||||||||||||| |||| ||||||||||||||| |||||| |||||||| |
|
|
| T |
42300833 |
gtcacgagctctggcttcacccatctgactggattcaacaatgttgttgaggttcacctggctcttcaaggcttcctcctttacattttcactcttctcc |
42300734 |
T |
 |
| Q |
407 |
aatattttgttga |
419 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
42300733 |
aatattctgttga |
42300721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 42301034 - 42300959
Alignment:
| Q |
126 |
atttggtctctcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcct |
201 |
Q |
| |
|
||||| ||||||||| |||||| |||||||| ||||||||||| | | ||||||||||||||||||||||||||| |
|
|
| T |
42301034 |
atttgttctctcttggttgtaataacctcttcctctgccacggctattggaaccaaaattgtttccacctcttcct |
42300959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 37 - 412
Target Start/End: Original strand, 29282025 - 29282421
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
29282025 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
29282124 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
29282125 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggatggattgaaattgttgtaattgttgt |
29282224 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |||||| | |
|
|
| T |
29282225 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaattgtcacgagc |
29282324 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29282325 |
tctggcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttctccaatatt |
29282421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 37 - 412
Target Start/End: Original strand, 27729984 - 27730380
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
27729984 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
27730083 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
27730084 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggatggattgaaattgttgtaattgttgt |
27730183 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |||||| | |
|
|
| T |
27730184 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaattgtcacgagc |
27730283 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27730284 |
tctggcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttttccaatatt |
27730380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 37 - 412
Target Start/End: Complemental strand, 45966538 - 45966142
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
45966538 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
45966439 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | |||||||| |||||||||||| ||||| ||| |||| |||| |
|
|
| T |
45966438 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaagttgtttccaccttttccttgatgggatggattgaaattgttgtaattgttgt |
45966339 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| |||||| ||||| || ||| ||||||||||||||||||||| |||||| |
|
|
| T |
45966338 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgacctcttcctctgaaatttcctcttcctccattgttgaaattgtcacgagt |
45966239 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| | || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45966238 |
tctggcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttctccaatatt |
45966142 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 37 - 412
Target Start/End: Complemental strand, 24147261 - 24146874
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgtt-gtatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| |||||||| ||||| |||| | ||||| ||| |||||||||| | |||| || | ||| |||| | |||| ||| |
|
|
| T |
24147261 |
ttgatatgaattctctgccatgtttgccttatgtttgtatctacaatcagcttctttgtgcctgtactttccacaattaaagcaaccattatttttcctc |
24147162 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcct-----------cttgaaattattgtctctccatt |
224 |
Q |
| |
|
||||| |||||| |||||||| |||||||||||||| | || |||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
24147161 |
tcttggttgtaataacctcttcctctgccacggttgttggagccaaaattgtttccacctcttccttgatgggatggattgaaattgttgtctctccatt |
24147062 |
T |
 |
| Q |
225 |
gatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacctttactctc |
324 |
Q |
| |
|
| | |||||| |||| ||||||||||||||| ||||||| |||| || |||| || ||| |||| |||| |||||||||| |||| || | || |
|
|
| T |
24147061 |
ggttgaagttgccacgtcctcttcctctaaaggttcctcgacctttaactctgaaatttcctcttaatccaatgttgaaattgtcacattctctggcttc |
24146962 |
T |
 |
| Q |
325 |
tcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
||| ||||| ||||| | ||| ||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
24146961 |
acccatctaattggattaaacaatgttgttgagcttcacctggctcttcaaggcttcctcctttactttttcagtcttatccaatatt |
24146874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 37 - 412
Target Start/End: Complemental strand, 29304271 - 29303875
Alignment:
| Q |
37 |
ttgatatgaattttctgccacgtttgcctgatgttg-tatttgcaatcggctgctttgtgcctaaaatttcaacggtgaaaacaactgtaatttggtctc |
135 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||||||| ||| |||| || ||||||||||||| | | |||| || | |||||||| | ||||| |||| |
|
|
| T |
29304271 |
ttgatatgaattctctgccatatttgcttgatgtttatatctgcagtcagctgctttgtgcccatactttccacaattaaaacaaccattatttgttctc |
29304172 |
T |
 |
| Q |
136 |
tcttgtttgtaagaacctctttctctgccacggttggtagaaccaaaattgtttccacctcttcctc--------------------ttgaaattattgt |
215 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||| ||||| ||| |||| |||| |
|
|
| T |
29304171 |
tcttggttgtaataacctcttcctctgccacggttattggaaccaaaattgtttccaccttttccttgatgggattgattgaaattgttgtaattgttgt |
29304072 |
T |
 |
| Q |
216 |
ctctccattgatcgaagtttccacatcctcttcctctaaaagttcctcaacctctacctctaaagttttttcttcctccattgttgaaattatcacgacc |
315 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||||||||||| |||||| | |||| ||||| || || ||||||||||||||||||||| |||||| |
|
|
| T |
29304071 |
ctctccattggttgaagttgccacgtcctcttcctctaaagcttcctcgatctcttcctctgaaacttcctcttcctccattgttgaaattgtcacgagt |
29303972 |
T |
 |
| Q |
316 |
tttactctctcccttctaaccggattcagcaacgttattgaggttcacctggcttttcatggcttcctcctttactttttcagtcttctccaatatt |
412 |
Q |
| |
|
| || || ||| ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29303971 |
tctagcttcacccatctgactggattcagcaacgttgttgaggttcacctggctcttcaaggcttcctcctttactttttcagtcttctccaatatt |
29303875 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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