View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10307_low_9 (Length: 294)

Name: NF10307_low_9
Description: NF10307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10307_low_9
NF10307_low_9
[»] chr6 (29 HSPs)
chr6 (1-276)||(7927030-7927304)
chr6 (90-274)||(7929036-7929220)
chr6 (140-238)||(17216957-17217055)
chr6 (146-238)||(5641688-5641779)
chr6 (155-237)||(9455854-9455935)
chr6 (176-238)||(29284153-29284215)
chr6 (146-221)||(1128434-1128509)
chr6 (140-238)||(6228258-6228356)
chr6 (193-238)||(6144016-6144061)
chr6 (141-238)||(8330489-8330586)
chr6 (193-238)||(9064918-9064963)
chr6 (150-227)||(19748108-19748185)
chr6 (167-228)||(20600567-20600627)
chr6 (193-238)||(33628939-33628984)
chr6 (150-222)||(6217960-6218031)
chr6 (188-223)||(19642560-19642595)
chr6 (141-220)||(30938392-30938470)
chr6 (192-238)||(3338305-3338351)
chr6 (167-200)||(6283962-6283995)
chr6 (189-222)||(12089145-12089178)
chr6 (193-238)||(14981700-14981745)
chr6 (189-238)||(24470389-24470438)
chr6 (193-222)||(26669673-26669702)
chr6 (193-238)||(31703726-31703771)
chr6 (150-238)||(7164704-7164791)
chr6 (141-181)||(7273051-7273091)
chr6 (193-236)||(9491734-9491778)
chr6 (193-225)||(17751348-17751380)
chr6 (188-228)||(32540959-32540999)
[»] chr2 (41 HSPs)
chr2 (140-238)||(42678322-42678420)
chr2 (146-238)||(3330199-3330291)
chr2 (159-238)||(33613603-33613682)
chr2 (145-222)||(31594380-31594457)
chr2 (188-237)||(44187751-44187800)
chr2 (194-238)||(5207145-5207189)
chr2 (186-226)||(44422152-44422192)
chr2 (141-238)||(24202150-24202247)
chr2 (193-238)||(29035028-29035073)
chr2 (141-238)||(31605499-31605595)
chr2 (193-238)||(32527075-32527120)
chr2 (193-238)||(34034402-34034447)
chr2 (150-238)||(33482640-33482728)
chr2 (146-221)||(1962831-1962906)
chr2 (139-238)||(30856515-30856614)
chr2 (188-238)||(2304337-2304387)
chr2 (188-222)||(10262786-10262820)
chr2 (176-222)||(11727368-11727414)
chr2 (176-226)||(17115554-17115604)
chr2 (155-221)||(17543105-17543171)
chr2 (190-228)||(20451864-20451902)
chr2 (140-238)||(25553144-25553241)
chr2 (164-238)||(28819646-28819720)
chr2 (141-211)||(36755622-36755692)
chr2 (146-219)||(6866513-6866586)
chr2 (141-238)||(20435781-20435878)
chr2 (193-222)||(30474209-30474238)
chr2 (176-225)||(36190089-36190138)
chr2 (141-202)||(36845120-36845180)
chr2 (193-238)||(37592220-37592265)
chr2 (140-221)||(40203294-40203375)
chr2 (193-238)||(42541207-42541252)
chr2 (193-238)||(43027207-43027252)
chr2 (193-238)||(43871005-43871050)
chr2 (193-236)||(580782-580826)
chr2 (190-222)||(4157663-4157695)
chr2 (132-184)||(14944154-14944205)
chr2 (190-222)||(20942123-20942155)
chr2 (186-238)||(21970437-21970489)
chr2 (189-225)||(36413808-36413844)
chr2 (193-225)||(40133531-40133563)
[»] chr8 (36 HSPs)
chr8 (150-227)||(43456661-43456738)
chr8 (140-237)||(3311439-3311536)
chr8 (150-238)||(19957319-19957407)
chr8 (150-238)||(43508446-43508534)
chr8 (193-238)||(38790570-38790615)
chr8 (146-237)||(8350441-8350533)
chr8 (155-238)||(10201276-10201359)
chr8 (140-238)||(1032569-1032667)
chr8 (140-238)||(32822115-32822212)
chr8 (193-238)||(2696585-2696630)
chr8 (193-238)||(2800071-2800116)
chr8 (188-237)||(31129349-31129398)
chr8 (140-221)||(36103937-36104018)
chr8 (140-221)||(41454842-41454923)
chr8 (150-238)||(38289233-38289321)
chr8 (141-181)||(40444705-40444745)
chr8 (193-228)||(7314785-7314820)
chr8 (141-216)||(13105095-13105169)
chr8 (146-181)||(18080944-18080979)
chr8 (161-216)||(39362288-39362343)
chr8 (140-238)||(1360133-1360230)
chr8 (140-238)||(4259858-4259956)
chr8 (188-238)||(10310329-10310379)
chr8 (141-219)||(11810570-11810648)
chr8 (188-226)||(33982237-33982275)
chr8 (140-238)||(41845427-41845525)
chr8 (193-238)||(1588819-1588864)
chr8 (188-221)||(13537326-13537359)
chr8 (188-221)||(13626874-13626907)
chr8 (141-238)||(33820393-33820490)
chr8 (194-238)||(10292405-10292449)
chr8 (193-221)||(16935639-16935667)
chr8 (141-181)||(31220344-31220384)
chr8 (141-221)||(39104607-39104686)
chr8 (193-225)||(39432339-39432371)
chr8 (189-221)||(45536766-45536798)
[»] chr5 (31 HSPs)
chr5 (146-219)||(7608080-7608153)
chr5 (148-238)||(87798-87888)
chr5 (150-238)||(34729481-34729568)
chr5 (141-222)||(20191442-20191522)
chr5 (189-233)||(18101952-18101996)
chr5 (146-221)||(15106902-15106977)
chr5 (139-238)||(43227864-43227963)
chr5 (188-238)||(4674813-4674863)
chr5 (140-238)||(31250146-31250244)
chr5 (188-238)||(36045132-36045182)
chr5 (140-238)||(38503255-38503353)
chr5 (193-238)||(1463923-1463968)
chr5 (193-238)||(6447478-6447523)
chr5 (141-222)||(9628117-9628198)
chr5 (159-216)||(16745102-16745159)
chr5 (140-237)||(17077360-17077457)
chr5 (189-221)||(2411309-2411341)
chr5 (193-228)||(10943768-10943803)
chr5 (188-222)||(31556865-31556899)
chr5 (193-222)||(1244741-1244770)
chr5 (193-238)||(18303076-18303121)
chr5 (193-238)||(20735173-20735218)
chr5 (193-222)||(27025443-27025472)
chr5 (189-222)||(29096322-29096355)
chr5 (193-222)||(33800945-33800974)
chr5 (188-237)||(37303981-37304029)
chr5 (140-216)||(8241053-8241128)
chr5 (169-221)||(18175235-18175287)
chr5 (193-225)||(28537187-28537219)
chr5 (141-181)||(31991816-31991856)
chr5 (140-212)||(39405311-39405383)
[»] chr4 (56 HSPs)
chr4 (140-238)||(38690665-38690763)
chr4 (141-210)||(34595928-34595996)
chr4 (150-238)||(45847924-45848012)
chr4 (188-238)||(52031254-52031304)
chr4 (140-221)||(29430496-29430577)
chr4 (188-238)||(8690261-8690311)
chr4 (188-238)||(15640441-15640491)
chr4 (140-238)||(16556450-16556548)
chr4 (188-222)||(38433358-38433392)
chr4 (140-238)||(43362166-43362264)
chr4 (140-238)||(46283121-46283219)
chr4 (193-234)||(7768790-7768831)
chr4 (193-238)||(9693014-9693059)
chr4 (193-238)||(14149845-14149890)
chr4 (193-238)||(28520729-28520774)
chr4 (193-238)||(48968208-48968253)
chr4 (193-238)||(53354964-53355009)
chr4 (146-219)||(55308053-55308125)
chr4 (140-219)||(35909045-35909125)
chr4 (193-228)||(4045076-4045111)
chr4 (155-238)||(24570224-24570307)
chr4 (141-196)||(32006501-32006555)
chr4 (193-228)||(36257746-36257781)
chr4 (193-228)||(37997854-37997889)
chr4 (141-216)||(53758975-53759049)
chr4 (193-228)||(56546457-56546492)
chr4 (160-238)||(11491217-11491295)
chr4 (188-222)||(12856231-12856265)
chr4 (188-238)||(36954184-36954234)
chr4 (188-238)||(37889604-37889654)
chr4 (188-238)||(40150520-40150570)
chr4 (188-222)||(45350323-45350357)
chr4 (188-222)||(45359802-45359836)
chr4 (140-178)||(52366206-52366244)
chr4 (193-222)||(3442895-3442924)
chr4 (189-222)||(3465631-3465664)
chr4 (189-238)||(5909781-5909829)
chr4 (160-228)||(11872891-11872960)
chr4 (161-222)||(13264260-13264321)
chr4 (193-238)||(22525440-22525485)
chr4 (193-222)||(30295565-30295594)
chr4 (193-222)||(30324467-30324496)
chr4 (193-226)||(34773693-34773726)
chr4 (140-181)||(39254599-39254640)
chr4 (193-238)||(46799459-46799504)
chr4 (140-181)||(49635431-49635472)
chr4 (193-238)||(52330907-52330952)
chr4 (193-238)||(53815748-53815793)
chr4 (188-221)||(55485841-55485874)
chr4 (141-181)||(20096291-20096330)
chr4 (155-227)||(23448987-23449059)
chr4 (193-236)||(36576316-36576360)
chr4 (188-228)||(42411462-42411502)
chr4 (158-238)||(45355716-45355795)
chr4 (158-238)||(45369457-45369536)
chr4 (198-238)||(49607607-49607647)
[»] chr3 (56 HSPs)
chr3 (140-238)||(50676865-50676963)
chr3 (141-238)||(166788-166885)
chr3 (140-238)||(50381713-50381811)
chr3 (150-219)||(28054746-28054815)
chr3 (150-219)||(28065171-28065240)
chr3 (146-227)||(38869200-38869281)
chr3 (161-238)||(24559408-24559486)
chr3 (140-238)||(43897601-43897699)
chr3 (140-238)||(45431626-45431724)
chr3 (150-238)||(1102694-1102782)
chr3 (143-203)||(42831929-42831988)
chr3 (138-216)||(10828470-10828548)
chr3 (140-238)||(39739273-39739371)
chr3 (140-238)||(49429460-49429557)
chr3 (193-238)||(9625035-9625080)
chr3 (193-238)||(10959185-10959230)
chr3 (167-216)||(20407304-20407353)
chr3 (193-238)||(27183679-27183724)
chr3 (141-238)||(31419583-31419680)
chr3 (156-237)||(32421363-32421444)
chr3 (139-199)||(11661201-11661261)
chr3 (189-221)||(23820677-23820709)
chr3 (176-216)||(32429785-32429825)
chr3 (188-228)||(36331734-36331774)
chr3 (150-238)||(47864645-47864733)
chr3 (193-228)||(3955360-3955395)
chr3 (197-228)||(23025953-23025984)
chr3 (141-228)||(25363577-25363662)
chr3 (189-228)||(36476407-36476446)
chr3 (191-226)||(46710886-46710921)
chr3 (176-222)||(335044-335090)
chr3 (188-226)||(362990-363028)
chr3 (188-222)||(16006520-16006554)
chr3 (148-238)||(24651132-24651221)
chr3 (140-221)||(25165439-25165521)
chr3 (140-238)||(33528203-33528301)
chr3 (188-222)||(43774232-43774266)
chr3 (188-226)||(49146131-49146169)
chr3 (141-222)||(12977257-12977338)
chr3 (168-237)||(20221461-20221530)
chr3 (167-216)||(23090282-23090331)
chr3 (141-222)||(23651084-23651165)
chr3 (195-228)||(24136760-24136793)
chr3 (204-237)||(27636771-27636804)
chr3 (204-237)||(27639809-27639842)
chr3 (150-227)||(31202916-31202993)
chr3 (193-226)||(35280713-35280746)
chr3 (141-210)||(46226070-46226137)
chr3 (155-238)||(1325329-1325413)
chr3 (194-238)||(7448361-7448405)
chr3 (194-238)||(7456503-7456547)
chr3 (190-222)||(14417917-14417949)
chr3 (193-221)||(34407105-34407133)
chr3 (141-181)||(35126290-35126329)
chr3 (206-238)||(43598863-43598895)
chr3 (193-237)||(52030173-52030217)
[»] chr7 (43 HSPs)
chr7 (141-238)||(46243291-46243388)
chr7 (140-238)||(25770040-25770138)
chr7 (150-238)||(28914875-28914964)
chr7 (140-237)||(36528218-36528315)
chr7 (142-238)||(3961406-3961502)
chr7 (140-238)||(24029984-24030082)
chr7 (140-238)||(25775611-25775709)
chr7 (140-238)||(33248800-33248898)
chr7 (141-238)||(23602274-23602371)
chr7 (188-237)||(41417274-41417323)
chr7 (155-238)||(43440703-43440786)
chr7 (139-222)||(48525575-48525658)
chr7 (140-238)||(40273820-40273918)
chr7 (193-238)||(19126789-19126834)
chr7 (193-238)||(31475838-31475883)
chr7 (140-221)||(31793467-31793548)
chr7 (161-210)||(34809365-34809414)
chr7 (193-238)||(42841779-42841824)
chr7 (141-213)||(9992610-9992682)
chr7 (141-216)||(18223709-18223783)
chr7 (155-238)||(4956090-4956173)
chr7 (155-238)||(38378233-38378316)
chr7 (142-216)||(9497971-9498044)
chr7 (188-238)||(14818363-14818413)
chr7 (188-238)||(15265361-15265411)
chr7 (188-238)||(24396992-24397042)
chr7 (141-215)||(29132036-29132110)
chr7 (140-238)||(48433708-48433806)
chr7 (163-216)||(3392492-3392545)
chr7 (193-238)||(3889798-3889843)
chr7 (140-181)||(8249704-8249745)
chr7 (193-238)||(12166134-12166179)
chr7 (188-225)||(16814744-16814781)
chr7 (193-222)||(22965972-22966001)
chr7 (193-222)||(23685568-23685597)
chr7 (193-222)||(30644221-30644250)
chr7 (167-216)||(41090290-41090339)
chr7 (188-236)||(41507718-41507767)
chr7 (141-238)||(44662461-44662558)
chr7 (194-222)||(24579300-24579328)
chr7 (146-210)||(27263347-27263410)
chr7 (200-228)||(36343388-36343416)
chr7 (153-237)||(45723868-45723952)
[»] chr1 (58 HSPs)
chr1 (150-238)||(19424055-19424143)
chr1 (140-238)||(7438620-7438718)
chr1 (140-238)||(14262719-14262817)
chr1 (144-221)||(2465948-2466025)
chr1 (141-238)||(22779223-22779320)
chr1 (189-237)||(38021300-38021348)
chr1 (151-238)||(40209913-40210000)
chr1 (140-238)||(40288233-40288336)
chr1 (140-238)||(10123051-10123148)
chr1 (140-238)||(24134622-24134720)
chr1 (188-238)||(29491517-29491566)
chr1 (140-238)||(34702311-34702409)
chr1 (143-217)||(34940436-34940509)
chr1 (193-238)||(17350113-17350158)
chr1 (157-238)||(25800331-25800412)
chr1 (193-238)||(39238768-39238813)
chr1 (190-230)||(9931136-9931176)
chr1 (193-237)||(23368731-23368775)
chr1 (176-228)||(24168587-24168639)
chr1 (176-228)||(27984999-27985051)
chr1 (146-238)||(52164369-52164461)
chr1 (155-238)||(8893874-8893957)
chr1 (186-225)||(33844662-33844701)
chr1 (186-225)||(33949277-33949316)
chr1 (140-238)||(49619971-49620069)
chr1 (160-238)||(52720703-52720781)
chr1 (176-226)||(11213459-11213509)
chr1 (188-238)||(12148571-12148621)
chr1 (140-238)||(24253641-24253739)
chr1 (160-238)||(42946465-42946543)
chr1 (141-199)||(47719110-47719167)
chr1 (188-222)||(48260203-48260237)
chr1 (188-222)||(49251409-49251443)
chr1 (142-216)||(50118977-50119050)
chr1 (140-181)||(4126898-4126939)
chr1 (141-210)||(9639809-9639877)
chr1 (140-181)||(12973333-12973374)
chr1 (193-238)||(19976550-19976595)
chr1 (193-222)||(21884627-21884656)
chr1 (193-238)||(25819237-25819282)
chr1 (193-222)||(30649145-30649174)
chr1 (193-222)||(32711158-32711187)
chr1 (193-238)||(35111701-35111746)
chr1 (189-222)||(38028585-38028618)
chr1 (193-238)||(40678875-40678920)
chr1 (189-238)||(47763383-47763432)
chr1 (140-221)||(48497228-48497309)
chr1 (189-236)||(538328-538376)
chr1 (167-210)||(1813337-1813381)
chr1 (188-228)||(2643823-2643863)
chr1 (146-222)||(4865808-4865883)
chr1 (193-225)||(12553246-12553278)
chr1 (172-216)||(14320924-14320968)
chr1 (141-181)||(19396212-19396251)
chr1 (141-181)||(24631840-24631879)
chr1 (141-181)||(27160495-27160535)
chr1 (143-199)||(32874392-32874447)
chr1 (141-209)||(38491045-38491113)
[»] scaffold0072 (1 HSPs)
scaffold0072 (165-238)||(17731-17804)
[»] scaffold0054 (1 HSPs)
scaffold0054 (150-237)||(22468-22555)
[»] scaffold0112 (1 HSPs)
scaffold0112 (193-228)||(17939-17974)
[»] scaffold0001 (1 HSPs)
scaffold0001 (140-238)||(419711-419809)
[»] scaffold0809 (1 HSPs)
scaffold0809 (193-238)||(4804-4849)
[»] scaffold0308 (1 HSPs)
scaffold0308 (193-238)||(7128-7173)
[»] scaffold0119 (1 HSPs)
scaffold0119 (193-222)||(1091-1120)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 7927304 - 7927030
Alignment:
Q  1 aatctcaagtgtaaaatagaagatctaattgagcatcaaaaaatggaagtaagttaagttctcactattgagaagcttagtcaccaagtaaaggtacaaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7927304 aatctcaagtgtaaaatagaagatctaatttagcatcaaaaaatggaagtaagttatgttctcactattgagaagcttagtcaccaagtaaaggtacaaa 7927205  T
Q  101 tccaaaaaagacaaaacaacatactcaacacaagtctatatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaac 200  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  7927204 tccaaaaaatacaaaacaacaaactcaacacaagtctacatgagcttaactcacttggtaagggataatgtataatatatgcaaagatcagagttcgaac 7927105  T
Q  201 cccagacaccccacttattcactttaaagatgaatttcaatcaatttacaaactcaacacaaacaaactaactact 276  Q
    ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  7927104 ccc-gacatcccacttattcactttaaagatgaatttcaatcaacttacaaactcaacacaaacaaactaattact 7927030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 90 - 274
Target Start/End: Complemental strand, 7929220 - 7929036
Alignment:
Q  90 aaaggtacaaatccaaaaaagacaaaacaacatactcaacacaagtctatatgagtttaactcacttggtaagggataatgcataatatatgtaaagatc 189  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| | ||| |    
T  7929220 aaaggtacaaatccaaaaaagacaaaacaacaaactcaacacaagtttatatgagtttaactcacttgataagggataatacataatatatgcagagacc 7929121  T
Q  190 ggagttcgaaccccagacaccccacttattcactttaaagatgaatttcaatcaatttacaaactcaacacaaacaaactaacta 274  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7929120 ggagttcaaaccccatacatcccacttattcactttaaagatgaatttcaatcaacttacaaactcaacacaaacaaactaacta 7929036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 17216957 - 17217055
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||||||||| ||||  | ||||||||||||| || |||||||||||||||||  || ||| ||||||||    
T  17216957 atgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggtgaatttc 17217055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 5641779 - 5641688
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||| |||||||||||||| ||||  | || ||| |||||||| || |||||||||||||||||| || ||| ||||||||    
T  5641779 ttaactcacttggtaatggataatgcataatttatg-caggaccggggttcgaactccggacaccccacttattcacctttaaggtgaatttc 5641688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 9455854 - 9455935
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||||||||||||||||||  | ||||||  | ||||||||||||||||| ||||||||||||||||| || ||| |||||||    
T  9455854 ttggtaagggataatgcatt-tgtatgtaggggtcggagttcgaaccccaaacaccccacttattcacctttaagttgaattt 9455935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 29284153 - 29284215
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||  |||||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  29284153 tatatgtagggatcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttc 29284215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 1128509 - 1128434
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||||| ||| |||||||||||||||||||| || |  | | || ||||||||||||||||||||| |||||||    
T  1128509 ttaactcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccccagacaccccatttattca 1128434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 6228356 - 6228258
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  6228356 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 6228258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 6144016 - 6144061
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  6144016 gttcgaaccccggacaccccacttattcactttaaaactgaatttc 6144061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 8330586 - 8330489
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||| |||| ||| ||||||| |||| ||||||||  || ||||||||||| || | |||| |||||||||||| || ||| ||||||||    
T  8330586 tgagcttaactctcttgataaaggataatacatattatatgtagggaccggagttcgaagccaaaacactccacttattcacctttaaggtgaatttc 8330489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 9064918 - 9064963
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||||| ||||||||  ||||||||    
T  9064918 gttcgaaccccagacaccccacttatttactttaaaagtgaatttc 9064963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19748108 - 19748185
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaa 227  Q
    |||| |||||||||||||||||| ||||| || |  ||| || ||||||||| | ||||||||||||||||| |||||    
T  19748108 ctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccacggacaccccacttattcattttaa 19748185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 20600567 - 20600627
Alignment:
Q  167 aatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||||||| ||||| | ||||||| ||| |||||||||||||||||| |||||    
T  20600567 aatgcataatatatgtagagatcagggttcgaa-ccctgacaccccacttattcaccttaaa 20600627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 33628984 - 33628939
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  33628984 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 33628939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 6217960 - 6218031
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||| ||||||| ||| |||||||||| | ||||||||| ||||||| || ||||| ||||||||    
T  6217960 ctcacttggtaaaggataatacat-atatatgtaatggtcggagttcaaaccccaaactccccatttattcac 6218031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 19642595 - 19642560
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcact 223  Q
    |||| |||||||||||||||||||||||||||||||    
T  19642595 tcggggttcgaaccccagacaccccacttattcact 19642560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 30938392 - 30938470
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattc 220  Q
    |||| |||||||| |||||| |||| | ||||||||||||| |  || ||| ||||||||||||||||||| ||||||||    
T  30938392 tgagcttaactcagttggta-gggacattgcataatatatgcagggaccggggttcgaaccccagacaccctacttattc 30938470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 3338351 - 3338305
Alignment:
Q  192 agttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||||| |||||||||| || ||| ||||||||    
T  3338351 agttcgaaccccagacaccctacttattcacatttaaggtgaatttc 3338305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 6283962 - 6283995
Alignment:
Q  167 aatgcataatatatgtaaagatcggagttcgaac 200  Q
    |||||||||||||||||||| |||||||||||||    
T  6283962 aatgcataatatatgtaaagctcggagttcgaac 6283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 12089145 - 12089178
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  12089145 cggagttcgaaccccggacaccccacttattcac 12089178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 14981745 - 14981700
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||  ||||||||||||||||||||||||  ||||||||    
T  14981745 gttcgaaccctggacaccccacttattcactttaaaagtgaatttc 14981700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 24470438 - 24470389
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||| || | |||||||||||||||||||  ||||||||    
T  24470438 cggagttcgaaccccggaaatcccacttattcactttaaaagtgaatttc 24470389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 26669702 - 26669673
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  26669702 gttcgaaccccagacaccccacttattcac 26669673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 31703771 - 31703726
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||  ||||| |||||||||||||| ||||||||||||    
T  31703771 gttcgaacccctaacacctcacttattcacttttaagatgaatttc 31703726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 7164704 - 7164791
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||||||||||||  ||||||||  |  |||||||||||||||   |||||||||||||||| || ||| ||||||||    
T  7164704 ctcatttgataagggataatgcatt-tatatgtaggggccggagttcgaaccccgaccaccccacttattcacctttaaggtgaatttc 7164791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 7273051 - 7273091
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    |||| |||||||| |||||||||||||||| ||||||||||    
T  7273051 tgagcttaactcagttggtaagggataatgaataatatatg 7273091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 9491778 - 9491734
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttta-aagatgaatt 236  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||    
T  9491778 gttcgaaccccggacaccccacttattcaccttataagatgaatt 9491734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 17751380 - 17751348
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||||| |||||||||||||||||||||    
T  17751380 gttcgaaccccggacaccccacttattcacttt 17751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 32540999 - 32540959
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||| ||||| ||||||||||||||| |||||    
T  32540999 tcggagttcgaactccagataccccacttattcaccttaaa 32540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 42678420 - 42678322
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||| |||||||||||||||||||| |||||  |||  |||||||||||||||||| |||||||||||||||||  || ||| ||||||||    
T  42678420 atgagtttaacttacttggtaagggataatgcacaatatgcgtagggatcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttc 42678322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 3330291 - 3330199
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||| || ||||||||||||||| ||||| || | || |||||||||||||||| |||||||||||||||||  || ||| ||||||||    
T  3330291 ttaactcatttagtaagggataatgcacaatatgtgcagaggtcggagttcgaaccccggacaccccacttattcatctttaaggtgaatttc 3330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 33613682 - 33613603
Alignment:
Q  159 taagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||| ||||||  | | |||||||||||||||| |||||||||||||||||| || ||| ||||||||    
T  33613682 taagggataatgcatattatatgcgagggtcggagttcgaaccccggacaccccacttattcacctttaagttgaatttc 33613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 31594457 - 31594380
Alignment:
Q  145 tttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||| ||||||||| |||||||||||||||||||  | ||| |||||||| |||| |||||||| ||||||||    
T  31594457 tttaactcatttggtaaggaataatgcataatatatgtaggggtcgaagttcgaatcccaaacaccccatttattcac 31594380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 44187751 - 44187800
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  44187751 tcggggttcgaaccccagacaccccacttattcactttaaaagtgaattt 44187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 5207145 - 5207189
Alignment:
Q  194 ttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||||||| || ||||||||||||    
T  5207145 ttcgaaccccagacaccccacttattcacctttaagatgaatttc 5207189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 44422152 - 44422192
Alignment:
Q  186 gatcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  44422152 gatcggagttcgaaccccggacaccccacttattcacttta 44422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 24202150 - 24202247
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||||||||||||||||||||| || |||| |  |  ||| ||||||||||| |||||||||||  ||||| || ||| ||||||||    
T  24202150 tgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttc 24202247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 29035028 - 29035073
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  29035028 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 29035073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 31605499 - 31605595
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| |||||||||||||||| ||||||| |  || ||| ||||||||| |||||||   | |||||||| || ||||||||||||    
T  31605499 tgagcttaactcacttagtaagggataatgcat-atatatgcagggaacggggttcgaacctcagacactttatttattcacatttaagatgaatttc 31605595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 32527120 - 32527075
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||    
T  32527120 gttcgaaccccagacaacccacttattcactttaaaagtgaatttc 32527075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 34034402 - 34034447
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  34034402 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 34034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 33482728 - 33482640
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||| || ||||| |||||||| |  || ||  ||||||||| |||||||||||||||||||  || ||||||||||||    
T  33482728 ctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatctttaagatgaatttc 33482640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 1962831 - 1962906
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||| |||||||||||| | |||| |  | |||  |||||||| || |||||||||||||||||    
T  1962831 ttaactcacttggtaaaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattca 1962906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 30856614 - 30856515
Alignment:
Q  139 tatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||| |||||||| ||| ||||||||||||||||||||| | || |   |  ||||||||||||||| |  ||||||||||| || ||||| ||||||    
T  30856614 tatgagattaactcaattgataagggataatgcataatataagcaaggggtgaggttcgaaccccagacgcttcacttattcacatttaagatcaatttc 30856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 2304337 - 2304387
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||||||||| ||||||||  ||||||||    
T  2304337 tcggggttcgaaccccggacaccccacttatttactttaaaagtgaatttc 2304387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 10262786 - 10262820
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||||||||||||||||||||||||||||||    
T  10262786 tcggggttcgaaccccagacaccccacttattcac 10262820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 11727368 - 11727414
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||  || |||||||||||||||| |||||||||||||||||    
T  11727368 tatatgtagggaccggagttcgaaccccaaacaccccacttattcac 11727414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 17115604 - 17115554
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||||| |||| |||||||||||||||| |||| |||| ||||||||||||    
T  17115604 tatatgcaaaggtcggagttcgaaccccggacatcccatttattcacttta 17115554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 17543171 - 17543105
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||||| ||||| || |  |  |||||||||||| || |||||||||||||||||    
T  17543171 ttggtaagggataatgcacaatatgtgcaggggccggagttcgaacgccggacaccccacttattca 17543105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 20451902 - 20451864
Alignment:
Q  190 ggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  20451902 ggagttcgaaccccaaacactccacttattcactttaaa 20451864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 25553241 - 25553144
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||| ||| |||||||||||||||||| ||||| || | |||| || ||||||| | |||| || |||||||||||  || ||||||||||||    
T  25553241 atgagcttaattcatttggtaagggataatgcacaatatgtgcagagattggggttcgaa-ctcagatactccacttattcatctttaagatgaatttc 25553144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 28819646 - 28819720
Alignment:
Q  164 gataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| | ||  || ||||| |||| || ||||| |||||||||||||| | ||||||||||    
T  28819646 gataatgcataatatatgcagaggccgaagttcaaacctcaaacacctcacttattcacttttacgatgaatttc 28819720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 36755622 - 36755692
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccc 211  Q
    |||| ||||||||||||||||||||||||| || |||||| ||  | |||| ||| ||||||| |||||||    
T  36755622 tgagcttaactcacttggtaagggataatggattatatatataggggtcggggtttgaaccccggacaccc 36755692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 6866513 - 6866586
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||||||| |||||||||||||||||| ||||| || |   | ||||||||||| ||| |||||| ||||||||    
T  6866513 ttaactcatttggtaagggataatgcacaatatgtgcaggaaccggagttcgaatcccggacacctcacttatt 6866586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 20435781 - 20435878
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||||||||||||||| |||||| | |||| || |  ||| ||||||||| | |||| ||||||||||||  || ||| ||||||||    
T  20435781 tgagcttagctcacttggtaagggatattgcatattttatgcaaggcccggggttcgaacctcggacatcccacttattcatctttaaggtgaatttc 20435878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 30474238 - 30474209
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  30474238 gttcgaaccccagacaccccacttattcac 30474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 36190089 - 36190138
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||| | |||  ||||||||| |||||||||||||||||||||||    
T  36190089 tatatgtaagggtcgaggttcgaacctcagacaccccacttattcacttt 36190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 36845120 - 36845180
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccc 202  Q
    ||||| |||||||||||||| |||| ||||||||||||||| | || |||||||||| ||||    
T  36845120 tgagtataactcacttggta-gggacaatgcataatatatgcagaggtcggagttcggaccc 36845180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 37592265 - 37592220
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||||| || || ||| ||||||||    
T  37592265 gttcgaaccccagacaccccacttatttacctttaaggtgaatttc 37592220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 40203375 - 40203294
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| ||| |||| | |||||||||||||| | ||||| ||||| | || | ||| |||||||||| ||||||||||||||    
T  40203375 atgagcttagctcattcggtaagggataatgtacaatatgtgtaagggtcagggtttgaaccccagataccccacttattca 40203294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 42541207 - 42541252
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||| |||| || ||| ||||||||    
T  42541207 gttcgaaccccagacaccccacttactcacctttaaggtgaatttc 42541252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 43027207 - 43027252
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||| |||||||| || ||| ||||||||    
T  43027207 gttcgaaccccagacaccccatttattcacctttaaggtgaatttc 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 43871005 - 43871050
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  43871005 gttcgaatcccggacaccccacttattcactttaaaagtgaatttc 43871050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 580826 - 580782
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttta-aagatgaatt 236  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||    
T  580826 gttcgaaccccggacaccccacttattcaccttataagatgaatt 580782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 4157695 - 4157663
Alignment:
Q  190 ggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||| ||||||||||||||||||    
T  4157695 ggagttcgaaccccggacaccccacttattcac 4157663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 14944154 - 14944205
Alignment:
Q  132 aagtctatatgagtttaactcacttggtaagggataatgcataatatatgtaa 184  Q
    |||||||| |||| ||||||||||| |||| ||| ||||||||||||||||||    
T  14944154 aagtctatgtgagcttaactcacttagtaa-ggacaatgcataatatatgtaa 14944205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 222
Target Start/End: Complemental strand, 20942155 - 20942123
Alignment:
Q  190 ggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||| |||||||||||    
T  20942155 ggagttcgaaccccagacacctcacttattcac 20942123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 21970489 - 21970437
Alignment:
Q  186 gatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||| ||||||||||| || ||||| |||||||||||||||  ||||||||    
T  21970489 gatcggggttcgaaccccggataccccgcttattcactttaaaagtgaatttc 21970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 36413808 - 36413844
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||||||||  |||||||||||||||||||||    
T  36413808 cggagttcgaaccctggacaccccacttattcacttt 36413844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 40133531 - 40133563
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttt 225  Q
    |||| ||||||||||||||||||||||||||||    
T  40133531 gttcaaaccccagacaccccacttattcacttt 40133563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 43456738 - 43456661
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaa 227  Q
    |||| |||||||||||||||||| ||||||||||| | |||| ||||||||||| ||||||||||||||||| |||||    
T  43456738 ctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccccggacaccccacttattcattttaa 43456661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 3311439 - 3311536
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||| |||||||| |||| ||||||||||| | ||| |||| |  |||| | ||||||||||| |||||||||||||||||  ||||||||||||||    
T  3311439 atgagcttaactcatttggcaagggataatgtacaatttatgcagggatcagggttcgaaccccggacaccccacttattcatcttaaagatgaattt 3311536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 19957407 - 19957319
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||| |||||| |  |  ||  ||||||||||| |||||||||||||||||| || ||| ||||||||    
T  19957407 ctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttc 19957319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 43508534 - 43508446
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| ||||||| |||||||||||||||||  |  ||| ||| ||||||| |||||||||||||||||| |||||| ||||||||    
T  43508534 ctcagttgataagggacaatgcataatatatgtaggggccggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttc 43508446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 38790615 - 38790570
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||    
T  38790615 gttcgaaccccagacaccccacttattcactttaaaagtgaatttc 38790570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 8350441 - 8350533
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaattt 237  Q
    |||||||| |||||||| |||||| || |||||||| |  |  ||||||||||||| | ||||||||||||||||| |||| |||||||||||    
T  8350441 ttaactcatttggtaagtgataatacacaatatatgcaggggccggagttcgaacctcggacaccccacttattcatcttttaagatgaattt 8350533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 10201276 - 10201359
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaatttc 238  Q
    |||||||| ||||||||||||||||||||  | |||| ||||||||||| |||||| || ||||||| |||||||| ||||||||    
T  10201276 ttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattcacctttaaag-tgaatttc 10201359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 1032569 - 1032667
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |   || |||||||||||||||||||||||||||||  || ||| ||||||||    
T  1032569 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttc 1032667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 32822115 - 32822212
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| |||||||||||||||||||  | ||| ||  |   ||||||||||||||||||| |||||| ||||||||| ||| ||||||||    
T  32822115 atgagcttaactcatttggtaagggataatgcatt-tgtatataggggcgggagttcgaaccccagacatcccactcattcacttttaaggtgaatttc 32822212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 2696585 - 2696630
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  2696585 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 2696630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 2800071 - 2800116
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  2800071 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 2800116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 31129349 - 31129398
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||| ||||||||||| ||||||||||||||||||||||||  |||||||    
T  31129349 tcggggttcgaaccccggacaccccacttattcactttaaaagtgaattt 31129398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 36104018 - 36103937
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| |||||||| ||||||| |||||||||| ||||| || |  |  ||| |||||||||||| ||||||||||||||||    
T  36104018 atgagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccccaaacaccccacttattca 36103937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 41454923 - 41454842
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||    
T  41454923 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattca 41454842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 38289321 - 38289233
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| |||||||||||||||||| ||||| || |  | |||| ||||||||| || ||||||||||||||||  || ||| ||||||||    
T  38289321 ctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggtgaatttc 38289233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 40444705 - 40444745
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    |||| ||| ||||||||||||||||||||||||||||||||    
T  40444705 tgagcttagctcacttggtaagggataatgcataatatatg 40444745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 7314785 - 7314820
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7314785 gttcgaaccccggacaccccacttattcactttaaa 7314820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 13105095 - 13105169
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    |||| |||||||| |||||| |||| ||||||||||||||| || |  ||| ||||||||| ||||||||||||||    
T  13105095 tgagattaactcagttggta-gggacaatgcataatatatgcaagggccggggttcgaacctcagacaccccactt 13105169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 181
Target Start/End: Original strand, 18080944 - 18080979
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18080944 ttaactcacttggtaagggataatgcatattatatg 18080979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 39362288 - 39362343
Alignment:
Q  161 agggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||| |||||| |||||| | || | |||||||||||||||||||||||||||    
T  39362288 agggatattgcatattatatgcagaggttggagttcgaaccccagacaccccactt 39362343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 1360230 - 1360133
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||| || |||||||||| ||||| ||||  |   || ||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  1360230 atgagcttagctcatttggcaaaggataatgcacaatatgtgtaggggctggggttcgaaccccggacaccccacttattcattttaaag-tgaatttc 1360133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 4259858 - 4259956
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| |||||||||||||||||| ||||| || |  |  ||| |||| |||||| ||| |||||||||||||  || ||| ||||||||    
T  4259858 atgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtgaatttc 4259956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 10310329 - 10310379
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||| ||| ||| ||||||||||||||||||||||||  ||||||||    
T  10310329 tcggagtttgaatcccggacaccccacttattcactttaaaagtgaatttc 10310379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 11810570 - 11810648
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||| ||| |||||||||||| |||||||||||||||||| ||  | |||| |||| || | |||||| ||||||||||    
T  11810570 tgagcttagctcacttggtaatggataatgcataatatatatagcggtcggggttcaaaactcagacatcccacttatt 11810648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 33982237 - 33982275
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  33982237 tcggggttcgaaccccagacaccgcacttattcacttta 33982275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 41845525 - 41845427
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |||||| |||||||||||  |||||| | |||||||  || ||| ||||||||    
T  41845525 atgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggtgaatttc 41845427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 1588819 - 1588864
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| | ||||||||||||||||||||||||  ||||||||    
T  1588819 gttcgaacctcggacaccccacttattcactttaaaagtgaatttc 1588864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 13537359 - 13537326
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattca 221  Q
    |||| |||||||||||||||||||||||||||||    
T  13537359 tcggggttcgaaccccagacaccccacttattca 13537326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 13626907 - 13626874
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattca 221  Q
    |||| |||||||||||||||||||||||||||||    
T  13626907 tcggggttcgaaccccagacaccccacttattca 13626874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 33820490 - 33820393
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||| |||||| |||||||| || ||| | || | || |||| ||||||| ||||||||||||| |||||||  |||||| ||||||||    
T  33820490 tgagcttagctcatttggtatgggataatacacaatttgtgcagaggtcggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttc 33820393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 10292405 - 10292449
Alignment:
Q  194 ttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||| | ||||||||||||||||||||||||  ||||||||    
T  10292405 ttcgaacctcggacaccccacttattcactttaaaagtgaatttc 10292449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 16935639 - 16935667
Alignment:
Q  193 gttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||||||||||||||||    
T  16935639 gttcgaaccccagacaccccacttattca 16935667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 31220344 - 31220384
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    |||| ||| |||||||||||||||||||||||| |||||||    
T  31220344 tgagcttagctcacttggtaagggataatgcattatatatg 31220384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 39104607 - 39104686
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||| ||||||||||||    
T  39104607 tgagtttagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggaca-cccacttattca 39104686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 39432371 - 39432339
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||| |||||||||||||||||||||||    
T  39432371 gttcgaacctcagacaccccacttattcacttt 39432339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 45536766 - 45536798
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattca 221  Q
    ||||||||||||||| |||||||||||||||||    
T  45536766 cggagttcgaaccccggacaccccacttattca 45536798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 7608153 - 7608080
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||||||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7608153 ttaactcatttgataaaggataatgcacaatttatgtaaagatcggagttcgaaccccagacacctcacttatt 7608080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 87798 - 87888
Alignment:
Q  148 aactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||| |||||||||||||||||| |||||||| || | ||||||||||||| ||||||||||||  |||||| ||| ||| ||||||||    
T  87798 aactcatttggtaagggataatgcacaatatatgcaagggtcggagttcgaactccagacaccccaactattcatttttaaggtgaatttc 87888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 34729481 - 34729568
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||| |||||| |  | |||| ||||||| ||| |||||||||||||||||| || ||| ||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaa-cccggacaccccacttattcacctttaaggtgaatttc 34729568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 20191442 - 20191522
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||||||||||||||||||||||||||||  |||||| |  | |||| ||||||||||| ||||| ||||||||||||    
T  20191442 tgagcttaactcacttggtaagggataatgcat-ttatatgcaggggtcggggttcgaaccccggacactccacttattcac 20191522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 18101996 - 18101952
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaagatga 233  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  18101996 cggagttcgaaccccagacaccccacttattcaccttaaaaatga 18101952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 15106977 - 15106902
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||| | |||||||||||||||||| ||| | || | || |||| ||||||||||| |||||||||||||||||    
T  15106977 ttaacttatttggtaagggataatgcacaatttgtgcagaggtcggggttcgaaccccggacaccccacttattca 15106902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 43227864 - 43227963
Alignment:
Q  139 tatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  43227864 tatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 43227963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 4674863 - 4674813
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  4674863 tcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttc 4674813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 31250146 - 31250244
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  31250146 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 31250244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 36045182 - 36045132
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  36045182 tcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttc 36045132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 38503353 - 38503255
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  38503353 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 38503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 1463923 - 1463968
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  1463923 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 1463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 6447523 - 6447478
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||    
T  6447523 gttcgaacctcggacaccccacttattcactttaaaaatgaatttc 6447478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 9628117 - 9628198
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| |||||||| |||||||| |||||||||||||||||| |    |||| ||||||||| ||||||||| | ||||||||    
T  9628117 tgagcttaactcatttggtaagagataatgcataatatatgcaggattcggggttcgaacctcagacaccctatttattcac 9628198  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 16745102 - 16745159
Alignment:
Q  159 taagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||||| |||||| ||||||||  | ||||||||||||| |||||||||||||||    
T  16745102 taagggatattgcatattatatgtaggggtcggagttcgaactccagacaccccactt 16745159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 237
Target Start/End: Original strand, 17077360 - 17077457
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||| ||| |||| |||||||||||||||||| ||| | || |  | ||||  |||||||||| |||||||||||||||||  |||||| |||||||    
T  17077360 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaaaggtgaattt 17077457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 2411341 - 2411309
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||||||||||||||||||||    
T  2411341 cggagttcgaaccccagacaccccacttattca 2411309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 10943768 - 10943803
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10943768 gttcgaaccccggacaccccacttattcactttaaa 10943803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 31556865 - 31556899
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  31556865 tcggagttcgaaccccggacaccccacttattcac 31556899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 1244770 - 1244741
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  1244770 gttcgaaccccagacaccccacttattcac 1244741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 18303121 - 18303076
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||    
T  18303121 gttcgaaccccgaacaccccacttattcactttaaaagtgaatttc 18303076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 20735218 - 20735173
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  20735218 gttcgaatcccggacaccccacttattcactttaaaagtgaatttc 20735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 27025472 - 27025443
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  27025472 gttcgaaccccagacaccccacttattcac 27025443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 29096355 - 29096322
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  29096355 cggagttcgaaccccggacaccccacttattcac 29096322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 33800945 - 33800974
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  33800945 gttcgaaccccagacaccccacttattcac 33800974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 37303981 - 37304029
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||| ||||||||||  |||||||||||||||||||||||| ||||||||    
T  37303981 tcggggttcgaaccctggacaccccacttattcactttaaa-atgaattt 37304029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 8241053 - 8241128
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||| ||| |||| |||||| |||||| |||||| |||||| || | |||| ||||||||||| ||||||||||||    
T  8241053 atgagcttagctcagttggta-gggatattgcatattatatgcaagggtcggggttcgaaccccggacaccccactt 8241128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 18175235 - 18175287
Alignment:
Q  169 tgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    |||||| ||||||||  | |||| |||||||||||||||| ||||||||||||    
T  18175235 tgcatattatatgtaggggtcggggttcgaaccccagacatcccacttattca 18175287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 28537187 - 28537219
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||||| |||||||||||||||||||||    
T  28537187 gttcgaaccccggacaccccacttattcacttt 28537219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 31991856 - 31991816
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    |||| ||| |||||||||||||||||||||||| |||||||    
T  31991856 tgagcttagctcacttggtaagggataatgcattatatatg 31991816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 39405311 - 39405383
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacccc 212  Q
    ||||| ||| |||| ||||||||||||||||||||| || ||||  | |||| ||| ||| ||||||||||||    
T  39405311 atgaggttacctcatttggtaagggataatgcataacatgtgtaggggtcggggtttgaatcccagacacccc 39405383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 38690665 - 38690763
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| ||||||||||||||||||||||||| |||||| |  | |||| ||||||||||| |||||||||||||||| | || ||| ||||||||    
T  38690665 atgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaatttc 38690763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 34595996 - 34595928
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacc 210  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||||    
T  34595996 tgagtttaactcagttggtaagg-acaatgcataatatatgtaaagttcggggtttgaaccccagacacc 34595928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 45848012 - 45847924
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||||||||||||||||| || |  |||||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  45848012 ctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 45847924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 52031254 - 52031304
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  52031254 tcggggttcgaaccccagacaccccacttattcactttaaaagtgaatttc 52031304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 29430496 - 29430577
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| ||| || ||||||||||||| |||||||| |||||| |  |||||| ||||||||||| ||||||| |||||||||    
T  29430496 atgagcttagcttacttggtaagggacaatgcatattatatgcagtgatcggggttcgaaccccggacaccctacttattca 29430577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 8690261 - 8690311
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  8690261 tcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttc 8690311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 15640491 - 15640441
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||| ||||||||||||||||||||||||||  ||||||||    
T  15640491 tcggggttcgaacctcagacaccccacttattcactttaaaagtgaatttc 15640441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 16556450 - 16556548
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  | |||| |||||||||||  ||||||||||||||||  || ||| ||||||||    
T  16556450 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatttc 16556548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 38433358 - 38433392
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||||||||||||||||||||||    
T  38433358 tcggagttcgaaccccagacaccccacttattcac 38433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 43362264 - 43362166
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| ||| |||||||||||||| |||||||  |  | |||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  43362264 atgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 43362166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 46283121 - 46283219
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  46283121 atgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 46283219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 7768831 - 7768790
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaa 234  Q
    ||||||||||| |||||||||||||||||||||||| |||||    
T  7768831 gttcgaaccccggacaccccacttattcactttaaaaatgaa 7768790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 9693014 - 9693059
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  9693014 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 9693059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 14149845 - 14149890
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  14149845 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 14149890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 28520774 - 28520729
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  28520774 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 28520729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 48968253 - 48968208
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  48968253 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 48968208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 53355009 - 53354964
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||    
T  53355009 gttcgaaccccggacaccccacttatttactttaaaaatgaatttc 53354964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 55308125 - 55308053
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||||||| ||||||| |||||||||||||| |||| |  |||| |  ||||||||||||||||||||||||||    
T  55308125 ttaactca-ttggtaaaggataatgcataatttatgcagggatcaggattcgaaccccagacaccccacttatt 55308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 35909125 - 35909045
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggag-ttcgaaccccagacaccccacttatt 219  Q
    ||||| ||| |||| || ||||||||||||||| |||||||| |  | |||||| |||||| |||||||||||||||||||    
T  35909125 atgagcttagctcattttgtaagggataatgcacaatatatgcaggggtcggaggttcgaatcccagacaccccacttatt 35909045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 4045111 - 4045076
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||||||||||| |||||||||||||||||||||||    
T  4045111 gttcgaaccccaaacaccccacttattcactttaaa 4045076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 24570224 - 24570307
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| ||||||||||  | | || |||||||||||  |||||| |||||||||  || ||| ||||||||    
T  24570224 ttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccgaacaccctacttattcaactttaaggtgaatttc 24570307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 32006501 - 32006555
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttc 196  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  32006501 tgagtttagctcagttggta-gggataatgcataatatatgtaaagttcggggttc 32006555  T

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Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 36257746 - 36257781
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36257746 gttcgaaccccggacaccccacttattcactttaaa 36257781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 37997889 - 37997854
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||||||||||||||||||||||||||||| |||||    
T  37997889 gttcgaaccccagacaccccacttattcaccttaaa 37997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 53758975 - 53759049
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    |||||||| |||| ||||||||||||||||||| ||||||| |  | |||||||||||| ||| ||||| ||||||    
T  53758975 tgagtttagctcaattggtaagggataatgcat-atatatgcaggggtcggagttcgaatcccggacactccactt 53759049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 56546492 - 56546457
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||| ||||||||||||||||||||||||||    
T  56546492 gttcgaaccacagacaccccacttattcactttaaa 56546457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 11491295 - 11491217
Alignment:
Q  160 aagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||| | || |  |  ||||||||||||||| |||||||||||||||||  || ||| ||||||||    
T  11491295 aagggataatgcataatttgtgcaggggccggagttcgaaccccggacaccccacttattcatctttaaggtgaatttc 11491217  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 12856231 - 12856265
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  12856231 tcggagttcgaaccccggacaccccacttattcac 12856265  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 36954184 - 36954234
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  36954184 tcggggttcgaaccccggacaccccatttattcactttaaaagtgaatttc 36954234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 37889654 - 37889604
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  37889654 tcggggttcgaaccccggacacctcacttattcacttttaaggtgaatttc 37889604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 40150520 - 40150570
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| |||||| |||||||||||||||||  ||||||||    
T  40150520 tcggggttcgaaccccggacacctcacttattcactttaaaagtgaatttc 40150570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 45350323 - 45350357
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  45350323 tcggagttcgaaccccggacaccccacttattcac 45350357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 45359802 - 45359836
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  45359802 tcggagttcgaaccccggacaccccacttattcac 45359836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 52366206 - 52366244
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatat 178  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  52366206 atgagtttaactcatttggtaagggataatgcacaatat 52366244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 3442895 - 3442924
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  3442895 gttcgaaccccagacaccccacttattcac 3442924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 3465631 - 3465664
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  3465631 cggagttcgaaccccggacaccccacttattcac 3465664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 5909829 - 5909781
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||| || |||| ||||||||||||||||||| |||||||||    
T  5909829 cggagttcgaactcc-gacatcccacttattcactttaaaaatgaatttc 5909781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 11872891 - 11872960
Alignment:
Q  160 aagggataatgcataat-atatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||||| ||||||| || |||||||  | |||||||||||||||| |||| || ||||||||||||||||    
T  11872891 aagggacaatgcattattatatgtaggggtcggagttcgaaccccggacatcctacttattcactttaaa 11872960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 13264321 - 13264260
Alignment:
Q  161 agggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||| |||||| |||||| || || ||| ||||||||||| |||||||||||| |||||    
T  13264321 agggatattgcatattatatgcaaggaccggggttcgaaccccggacaccccacttcttcac 13264260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 22525440 - 22525485
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||| ||| |||||||||||||||||| || ||||||||||||    
T  22525440 gttcgaatcccggacaccccacttattcacctttaagatgaatttc 22525485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 30295565 - 30295594
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  30295565 gttcgaaccccagacaccccacttattcac 30295594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 30324467 - 30324496
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  30324467 gttcgaaccccagacaccccacttattcac 30324496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 34773726 - 34773693
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttta 226  Q
    ||||||||||| ||||||||||||||||||||||    
T  34773726 gttcgaaccccggacaccccacttattcacttta 34773693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 39254640 - 39254599
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    
T  39254640 atgagtttaactcacttagtaaggaataatacataatatatg 39254599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 46799459 - 46799504
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  46799459 gttcgaaccccggacaccccatttattcactttaaaagtgaatttc 46799504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 49635431 - 49635472
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||| |||| |||||||||||||||||| ||||||||    
T  49635431 atgagtttagctcatttggtaagggataatgcacaatatatg 49635472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 52330952 - 52330907
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||| || ||||||||||||||||||||||||  ||||||||    
T  52330952 gttcgaactccggacaccccacttattcactttaaaagtgaatttc 52330907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 53815748 - 53815793
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  53815748 gttcgaaccccggacaccccacttattcactataaaagtgaatttc 53815793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 55485874 - 55485841
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattca 221  Q
    |||| |||||||||||||||||||||||||||||    
T  55485874 tcggggttcgaaccccagacaccccacttattca 55485841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 20096330 - 20096291
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  20096330 tgagtttaactcagttggta-gggataatgcataatatatg 20096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 23448987 - 23449059
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaa 227  Q
    |||||||||||||||||| ||||| || |  | | || |||||||||||  |||||||||||||||| |||||    
T  23448987 ttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccgaacaccccacttattcattttaa 23449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 36576316 - 36576360
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttta-aagatgaatt 236  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||    
T  36576316 gttcgaaccccggacaccccacttattcaccttataagatgaatt 36576360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 42411502 - 42411462
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||| ||||||||||| ||||||||||||||| ||||||||    
T  42411502 tcggggttcgaaccccggacaccccacttatttactttaaa 42411462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 45355795 - 45355716
Alignment:
Q  158 gtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||| ||||| ||||  | |||| ||||||||||| |||| ||||||||||||  || ||| ||||||||    
T  45355795 gtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggtgaatttc 45355716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 45369536 - 45369457
Alignment:
Q  158 gtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||| ||||| ||||  | |||| ||||||||||| |||| ||||||||||||  || ||| ||||||||    
T  45369536 gtaagggataatgcacaatatgtgtaggggtcggggttcgaaccccggaca-cccacttattcatctttaaggtgaatttc 45369457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 238
Target Start/End: Original strand, 49607607 - 49607647
Alignment:
Q  198 aaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||||| || ||| ||||||||    
T  49607607 aaccccagacaccccacttattcacctttaaggtgaatttc 49607647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 50676963 - 50676865
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||  | | || |||||||||||  ||||||||||||||||| || ||| ||||||||    
T  50676963 atgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaaggtgaatttc 50676865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 166788 - 166885
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaatttc 238  Q
    |||| ||| ||||||||||||||||||||||||||| |||| |  |  ||| |||||||||||||||||| |||||||||| |||||||| ||||||||    
T  166788 tgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaag-tgaatttc 166885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 50381713 - 50381811
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| |||||||||||||||||| |||||||| |  | |||| ||||||| ||| |||||||||||||||||  || ||| ||||||||    
T  50381713 atgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtgaatttc 50381811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 28054815 - 28054746
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||||||||||||||||| |||||||| |||| |  | || |||||||||||||||||||||||||||||    
T  28054815 ctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatt 28054746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 28065240 - 28065171
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttatt 219  Q
    |||||||||||||||||| |||||||| |||| |  | || |||||||||||||||||||||||||||||    
T  28065240 ctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatt 28065171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 38869281 - 38869200
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaa 227  Q
    |||||||||||||||||||||||||||||||| ||| |  | |||| |||||||||||  |||| |||||||| ||||||||    
T  38869281 ttaactcacttggtaagggataatgcataatacatgcaggggtcggggttcgaaccccgaacacgccacttatccactttaa 38869200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 24559408 - 24559486
Alignment:
Q  161 agggataatgcataat-atatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||| ||||| |  | |||| ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  24559408 agggataatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaagtgaatttc 24559486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 43897601 - 43897699
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| || ||||||||||| | |||| ||| ||||||||  ||| |  ||||||||| |||||||||||||||||||| || ||| ||||||||    
T  43897601 atgagtttagcttacttggtaaggaaaaatgtatattatatgtagggattgatgttcgaacctcagacaccccacttattcacctttaaggtgaatttc 43897699  T

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Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 45431626 - 45431724
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||||||||||||||||||||| || | |||| |  | || | ||||||||||| |||||||||||||||||| || ||| ||||||||    
T  45431626 atgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtgaatttc 45431724  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 1102782 - 1102694
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||||||||||||||||||||| |||| |  |  |||||||||||||   |||||||||||||||||| || ||| ||||||||    
T  1102782 ctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttc 1102694  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 42831988 - 42831929
Alignment:
Q  143 agtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaacccc 203  Q
    |||||| ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||    
T  42831988 agtttagctcacttggta-gggataatgcatattatatgtagaggtcggagttcgaacccc 42831929  T

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Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 10828470 - 10828548
Alignment:
Q  138 atatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||| ||| |||| |||||| ||   |||||||| |||||| | ||| ||||||||||||||||||||||||||||    
T  10828470 atatgagcttagctcagttggtagggacaaatgcatattatatgcagagaccggagttcgaaccccagacaccccactt 10828548  T

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Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 39739273 - 39739371
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  ||| || ||||||||||| |||||| ||||||||||  || ||| ||||||||    
T  39739273 atgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatttc 39739371  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 49429460 - 49429557
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| |||||||||||||||||||  | |||| |  || | | ||||||||||| |||||||||||||||||| || ||| ||||||||    
T  49429460 atgagcttaactcatttggtaagggataatgcatt-tgtatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaatttc 49429557  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 9625035 - 9625080
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  9625035 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 9625080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 10959185 - 10959230
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  10959185 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 10959230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 20407304 - 20407353
Alignment:
Q  167 aatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    |||||||| |||||| | ||||||| ||||||||||||||||||||||||    
T  20407304 aatgcatattatatgcagagatcggggttcgaaccccagacaccccactt 20407353  T

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Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 27183724 - 27183679
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  27183724 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 27183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 31419583 - 31419680
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| |||||||| ||||||||||| || ||| ||||| ||||  |   || |||||||||||| ||||||||||||||||| |||||  ||||||||    
T  31419583 tgagcttaactcatttggtaagggacaacgcacaatatgtgtaggggctggggttcgaaccccaaacaccccacttattcaccttaaaagtgaatttc 31419680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 32421363 - 32421444
Alignment:
Q  156 tggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||||||||||||||||||||||||| |  | |||| ||||||||| |  || |||||||||||||  || |||||||||||    
T  32421363 tggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcatctttaagatgaattt 32421444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 11661261 - 11661201
Alignment:
Q  139 tatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaa 199  Q
    |||||||||| |||||||| |||||||||||||||||| ||| ||  | ||||||||||||    
T  11661261 tatgagtttagctcacttgataagggataatgcataatttatataggggtcggagttcgaa 11661201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 23820677 - 23820709
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||||||||||||||||||||    
T  23820677 cggagttcgaaccccagacaccccacttattca 23820709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 32429785 - 32429825
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  32429785 tatatgtagaggtcggagttcgaaccccagacaccccactt 32429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 36331774 - 36331734
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  36331774 tcggggttcgaaccccggacaccccacttattcactttaaa 36331734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 47864645 - 47864733
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| |||||||||||||||||| ||||| || |  | | || ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  47864645 ctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 47864733  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 3955360 - 3955395
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3955360 gttcgaaccccggacaccccacttattcactttaaa 3955395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 23025953 - 23025984
Alignment:
Q  197 gaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||||||||||||||||||||||    
T  23025953 gaaccccagacaccccacttattcactttaaa 23025984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 25363577 - 25363662
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||| || |||||| ||| |||||| ||||||||  | | ||||||||||||||| |||||||  ||||||||||||||    
T  25363577 tgagtttaactcagtttgtaagg-atattgcatattatatgtagtgtt-ggagttcgaaccccacacaccccttttattcactttaaa 25363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 36476407 - 36476446
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  36476407 cggagttcgaaccccgaacaccccacttattcactttaaa 36476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 46710921 - 46710886
Alignment:
Q  191 gagttcgaaccccagacaccccacttattcacttta 226  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46710921 gagttcgaacctcagacaccccacttattcacttta 46710886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 335090 - 335044
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    ||||||||| || ||||||||||||||  ||||||||||||||||||    
T  335090 tatatgtaaggaccggagttcgaaccctggacaccccacttattcac 335044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 362990 - 363028
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||||||||||||||| || |||||||||||||||||||    
T  362990 tcggagttcgaaccccggataccccacttattcacttta 363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 16006554 - 16006520
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||||||||||||||||||||||||||||||    
T  16006554 tcggggttcgaaccccagacaccccacttattcac 16006520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 24651132 - 24651221
Alignment:
Q  148 aactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||| ||||||||| || |||||| || | |||   ||||||||||||| ||| ||||||||||| || ||| ||||||||    
T  24651132 aactcacttggtaaaggataatgcgta-tatatgcaagggtcgagattcgaaccccagatacctcacttattcacctttaaggtgaatttc 24651221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 25165439 - 25165521
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagaca-ccccacttattca 221  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  || ||| ||||||||||| |||| |||||||||||||    
T  25165439 atgagcttagctcatttggtaagggataatgcacaatatgtgcagggaccggggttcgaaccccggacacccccacttattca 25165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 33528301 - 33528203
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||| | || |  |   || |||||||||||||||||||||||||||||  || ||| ||||||||    
T  33528301 atgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttc 33528203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 43774232 - 43774266
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||||||||||||||||||||||||||||||    
T  43774232 tcggggttcgaaccccagacaccccacttattcac 43774266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 49146131 - 49146169
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  49146131 tcggggttcgaaccccggacaccccacttattcacttta 49146169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 12977257 - 12977338
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||| ||||||||| ||||||||||| ||||| |||| || | |   ||||||||||||||| ||| |||||||||||    
T  12977257 tgagcttagctcacttggcaagggataatgtataatttatgcaagggttaaagttcgaaccccagataccacacttattcac 12977338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 20221461 - 20221530
Alignment:
Q  168 atgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||||| ||||||||  | |||| ||||||||| | |||| |||||||||||||||| || ||||||||    
T  20221461 atgcatattatatgtaggggtcggtgttcgaacctcggacatcccacttattcacttttaaaatgaattt 20221530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 23090282 - 23090331
Alignment:
Q  167 aatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||||||||||| || | |||| ||||||| ||||||||||||||||    
T  23090282 aatgcataatatatgcaatggtcggggttcgaatcccagacaccccactt 23090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 23651165 - 23651084
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| |||||||| ||| |||| ||||||||||||||||| || |  |||  ||||||||| | |||| |||||||||||||    
T  23651165 tgagcttaactcatttgataagagataatgcataatatatatagaagtcgaggttcgaacctcggacatcccacttattcac 23651084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 24136793 - 24136760
Alignment:
Q  195 tcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||| ||||||||||||||||||||||||    
T  24136793 tcgaaccccggacaccccacttattcactttaaa 24136760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 27636771 - 27636804
Alignment:
Q  204 agacaccccacttattcactttaaagatgaattt 237  Q
    ||||||| ||||||||||||||||||||||||||    
T  27636771 agacacctcacttattcactttaaagatgaattt 27636804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 27639809 - 27639842
Alignment:
Q  204 agacaccccacttattcactttaaagatgaattt 237  Q
    ||||||||||||||||||| ||||||||||||||    
T  27639809 agacaccccacttattcaccttaaagatgaattt 27639842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 31202916 - 31202993
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaa 227  Q
    ||||||||| |||||||||| ||| |||||||||  | |||  ||||||||| |  ||| ||||||||||||||||||    
T  31202916 ctcacttggcaagggataatacattatatatgtagtggtcgatgttcgaaccacgaacatcccacttattcactttaa 31202993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 35280713 - 35280746
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttta 226  Q
    |||||||||| |||||||||||||||||||||||    
T  35280713 gttcgaaccctagacaccccacttattcacttta 35280746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 46226137 - 46226070
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacc 210  Q
    ||||||||||||| |||||| |||| ||||||||||||||| || |  ||| ||||||||||||||||||    
T  46226137 tgagtttaactcaattggta-gggacaatgcataatatatgcaaggtccgg-gttcgaaccccagacacc 46226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 1325413 - 1325329
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagaca-ccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| |||||||  |  ||||||  |||||||||| |||| ||||| |||||||  || ||||||||||||    
T  1325413 ttggtaagggataatgcacaatatatacagggatcgggattcgaaccccggacacccccatttattcatctttaagatgaatttc 1325329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 7448405 - 7448361
Alignment:
Q  194 ttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||| ||||||||||||||||| |||  ||||||||    
T  7448405 ttcgaaccccagataccccacttattcacttcaaaagtgaatttc 7448361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 7456547 - 7456503
Alignment:
Q  194 ttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||| ||||||||||||||||| |||  ||||||||    
T  7456547 ttcgaaccccagataccccacttattcacttcaaaagtgaatttc 7456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 14417917 - 14417949
Alignment:
Q  190 ggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||| ||||||||||||||||||    
T  14417917 ggagttcgaaccccggacaccccacttattcac 14417949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 221
Target Start/End: Complemental strand, 34407133 - 34407105
Alignment:
Q  193 gttcgaaccccagacaccccacttattca 221  Q
    |||||||||||||||||||||||||||||    
T  34407133 gttcgaaccccagacaccccacttattca 34407105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 35126329 - 35126290
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  35126329 tgagtttaactcagttggta-gggataatgcataatatatg 35126290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 43598863 - 43598895
Alignment:
Q  206 acaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||||||||| |||||||||    
T  43598863 acaccccacttattcactttaaaaatgaatttc 43598895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 52030173 - 52030217
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||||||||| ||||||| ||||||||||||||||  |||||||    
T  52030173 gttcgaaccccggacaccctacttattcactttaaaagtgaattt 52030217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 46243291 - 46243388
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||| |||||||||||||||||||| ||||| ||  ||||||||||||||| ||  ||||||||||||||||| || ||| ||||||||    
T  46243291 tgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtgaatttc 46243388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 25770138 - 25770040
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaatttc 238  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||  | ||  |||||||| ||| |||||||||||||||| |||||||| ||||||||    
T  25770138 atgaatttaactcacttggtaaaggataatgtataatatatgtaagaaccgaggttcgaactccaaacaccccacttattcatctttaaag-tgaatttc 25770040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 28914964 - 28914875
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatc-ggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||||||||||||||||||| |||||| |  |  | || ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28914964 ctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccggacaccccacttattcactttaaaggtgaatttc 28914875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 36528315 - 36528218
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||| |||||||| |||||||||||||||||| ||||| | ||  | |||||||||||||||| |||| ||||| |||||| ||| ||| |||||||    
T  36528315 atgagcttaactcatttggtaagggataatgcacaatatgtataggggtcggagttcgaaccccggacatcccacctattcatttttaaggtgaattt 36528218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 3961502 - 3961406
Alignment:
Q  142 gagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||| ||||||| |||||||||| ||| | || | ||  ||| ||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  3961502 gagtttaactcatttggtaaaggataatgcacaatttgtgcagaggccggggttcgaaccccggacatcccacttattcattttaaaggtgaatttc 3961406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 24029984 - 24030082
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| |||| ||| |||||||||||||| ||||| ||||  |  ||| ||||||||||||||||||||| |||||||  || ||| ||||||||    
T  24029984 atgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggtgaatttc 24030082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 25775709 - 25775611
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| |||||||||||| |||||||| |||||||||| ||  | ||  |||||||| ||| ||||||||||||||||  || ||| ||||||||    
T  25775709 atgagtttagctcacttggtaaaggataatgtataatatatgcaagaaccgaggttcgaactccaaacaccccacttattcatctttaaggtgaatttc 25775611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 33248898 - 33248800
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||| ||||| |||||||| | || |||| ||||||||||| ||||||| |||||||||  || ||| ||||||||    
T  33248898 atgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttc 33248800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 23602274 - 23602371
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||| ||| ||||| |||||||||| |||||| |  || ||||||||||||||| |||||| ||||||||||| || ||| ||||||||    
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttc 23602371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 41417323 - 41417274
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  41417323 tcggggttcgaaccccagacaccccacttattcactttaaaagtgaattt 41417274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 43440703 - 43440786
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| ||||| || | || |||| |||||||  ||||||||||||||||||||  || ||| ||||||||    
T  43440703 ttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattccagacaccccacttattcatctttaaggtgaatttc 43440786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 48525575 - 48525658
Alignment:
Q  139 tatgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||  |||||||||||||||||| |||||||| |||||| |  | | || ||||||||||| |||||| |||||||||||    
T  48525575 tatgagtccaactcacttggtaagggacaatgcatattatatgcaggggttggggttcgaaccccggacacctcacttattcac 48525658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 40273820 - 40273918
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  40273820 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 40273918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 19126789 - 19126834
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  19126789 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 19126834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 31475883 - 31475838
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  31475883 gttcgaacccctgacaccccacttattcactttaaaagtgaatttc 31475838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 31793467 - 31793548
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| ||| |||| ||| |||||||||||||| ||||| || |  | |||| ||||||||||| |||||||||||||||||    
T  31793467 atgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattca 31793548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 34809365 - 34809414
Alignment:
Q  161 agggataatgcataatatatgtaaagatcggagttcgaaccccagacacc 210  Q
    ||||| ||||||||||||||||||||   |||||||||||||||||||||    
T  34809365 agggacaatgcataatatatgtaaagtcaggagttcgaaccccagacacc 34809414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 42841824 - 42841779
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||    
T  42841824 gttcgaaccccagacaccccacttattcatcttaaaggtgaatttc 42841779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 9992610 - 9992682
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacccca 213  Q
    |||| ||| |||| ||| ||||||||||||||| || |||||| ||||||| |||||||||||  ||||||||    
T  9992610 tgagcttagctcatttgataagggataatgcattatgtatgtagagatcggggttcgaaccccgaacacccca 9992682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 18223783 - 18223709
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatc-ggagttcgaaccccagacaccccactt 216  Q
    |||| |||||||| |||||| |||||| |||||| ||||||||| |||| |||||||||||||| ||||||||||||    
T  18223783 tgagcttaactcagttggta-gggatattgcatattatatgtaa-gatccggagttcgaaccccggacaccccactt 18223709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 4956173 - 4956090
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| ||||| || |  | |||| ||||||||||  |||||||||||||||||  || ||| ||||||||    
T  4956173 ttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttc 4956090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 38378233 - 38378316
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| ||||| || |  |  ||| ||| ||||||| ||||||||||||||||| ||| ||| ||||||||    
T  38378233 ttggtaagggataatgcacaatatgtgcaggggccggggtttgaaccccggacaccccacttattcatttttaaggtgaatttc 38378316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 9497971 - 9498044
Alignment:
Q  142 gagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||| |||| |||||| |||||| |||||| ||||||||  | |||| ||||||||||| ||||||||||||    
T  9497971 gagtttagctcaattggta-gggatattgcatattatatgtaggggtcggggttcgaaccccggacaccccactt 9498044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 14818413 - 14818363
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  14818413 tcggggttcaaaccccaaacaccccacttattcactttaaaagtgaatttc 14818363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 15265411 - 15265361
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| |||| ||||||| |||||||||||||||||||||||  ||||||||    
T  15265411 tcggggttcaaaccccaaacaccccacttattcactttaaaagtgaatttc 15265361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 24396992 - 24397042
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||  ||||||| ||||||||||||||||  ||||||||    
T  24396992 tcggagttcgaaccctggacaccctacttattcactttaaaagtgaatttc 24397042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 29132110 - 29132036
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccact 215  Q
    |||| |||||||||| || |||||||||||||| || |||| ||   |||| ||| |||||||||||||||||||    
T  29132110 tgagcttaactcactcggcaagggataatgcattatgtatgcaagagtcggggtttgaaccccagacaccccact 29132036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 48433806 - 48433708
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| |||| |||||| |||||||||||||||||  || ||| ||||||||    
T  48433806 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtgaatttc 48433708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 3392492 - 3392545
Alignment:
Q  163 ggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||| |||||| ||||||||  | |||| ||||||||||||||||||||||||    
T  3392492 ggatattgcatattatatgtaggggtcggggttcgaaccccagacaccccactt 3392545  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 3889843 - 3889798
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| |||||||||||||||||  |||||| ||||||||    
T  3889843 gttcgaaccccggacaccccacttattcatcttaaaggtgaatttc 3889798  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 8249704 - 8249745
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||| ||| |||||||||||| |||||||||||||||||||    
T  8249704 atgagcttagctcacttggtaaaggataatgcataatatatg 8249745  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 12166134 - 12166179
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||||||||||||||  || ||| ||||||||    
T  12166134 gttcgaaccccagacaccccacttattcatctttaaggtgaatttc 12166179  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 16814744 - 16814781
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcacttt 225  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  16814744 tcggggttcgaaccccagacactccacttattcacttt 16814781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 22966001 - 22965972
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  22966001 gttcgaaccccagacaccccacttattcac 22965972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 23685597 - 23685568
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  23685597 gttcgaaccccagacaccccacttattcac 23685568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 30644221 - 30644250
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  30644221 gttcgaaccccagacaccccacttattcac 30644250  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 41090290 - 41090339
Alignment:
Q  167 aatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    |||||||| ||||||||  ||||||||||| |||||| ||||||||||||    
T  41090290 aatgcatattatatgtatggatcggagttcaaaccccggacaccccactt 41090339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 41507767 - 41507718
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcacttta-aagatgaatt 236  Q
    |||||||||||||| || |||||||| |||||||||||| ||||||||||    
T  41507767 tcggagttcgaacctcaaacaccccatttattcactttataagatgaatt 41507718  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 44662558 - 44662461
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||| ||||||||||||||||| || |||| |  |  ||| ||||||||||| |||||||||||  ||||| || ||| ||||||||    
T  44662558 tgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttc 44662461  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 222
Target Start/End: Complemental strand, 24579328 - 24579300
Alignment:
Q  194 ttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||||||||||||||||    
T  24579328 ttcgaaccccagacaccccacttattcac 24579300  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 27263347 - 27263410
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacc 210  Q
    |||||||| |||||| || | ||||||||||||||| || | |||||||||||||||||| ||||    
T  27263347 ttaactcagttggtatgg-acaatgcataatatatgcaaggttcggagttcgaaccccagccacc 27263410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 228
Target Start/End: Complemental strand, 36343416 - 36343388
Alignment:
Q  200 ccccagacaccccacttattcactttaaa 228  Q
    |||||||||||||||||||||||||||||    
T  36343416 ccccagacaccccacttattcactttaaa 36343388  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 45723952 - 45723868
Alignment:
Q  153 acttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||||||| |  |||||||||| |||| ||| | |||| |||||||| ||||| |||||||||||| || || ||| |||||||    
T  45723952 acttggtaaagattaatgcataagatatataagggtcggtgttcgaactccagataccccacttatttacctttaaggtgaattt 45723868  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 19424055 - 19424143
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| |||||||||||||||| |||||| |  | |||| ||||||||||| |||||||||||||||||| || ||| ||||||||    
T  19424055 ctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttc 19424143  T

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Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 7438620 - 7438718
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||| | ||||  | |||| |||||||| || |||||||||||||||||  |||||| ||||||||    
T  7438620 atgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaatttc 7438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 14262817 - 14262719
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| ||| |||||||||||||| |||||||| |  | |||| ||||||||||| ||||||| |||||||||  || ||| ||||||||    
T  14262817 atgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttc 14262719  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 2466025 - 2465948
Alignment:
Q  144 gtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||| |||| |||||||||||| ||||||||| |||| |||||| |  ||||||||| || ||||||||||||||||    
T  2466025 gtttagctcatttggtaagggatgatgcataatttatgcaaagattgaggttcgaaccgcatacaccccacttattca 2465948  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 22779223 - 22779320
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||| ||||||||||||||||||||||||| | |||  |    |||| |||||||||||| ||||||||||||||||| || || |||||||||    
T  22779223 tgagcttagctcacttggtaagggataatgcatattttatacaggagtcggggttcgaaccccaaacaccccacttattcacctttaaaatgaatttc 22779320  T

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Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 38021300 - 38021348
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  38021300 cggagttcgaaccccggacaccccacttattcactttaaaagtgaattt 38021348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 40210000 - 40209913
Alignment:
Q  151 tcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||| |||||||| ||||||||  | ||| ||||||||||||| ||||| || || ||||| || ||| ||||||||    
T  40210000 tcacttggtaagggacaatgcatattatatgtaggggtcgaagttcgaaccccaaacacctcattttttcacctttaaggtgaatttc 40209913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 40288233 - 40288336
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcata-----atatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaa 234  Q
    ||||||||| ||||||||||||||||||||  |||     |||||| ||  | |||||||||||||| | |||| | |||||||||||||| ||||||||    
T  40288233 atgagtttagctcacttggtaagggataatatatatatatatatatataggggtcggagttcgaacctcggacatcacacttattcacttttaagatgaa 40288332  T
Q  235 tttc 238  Q
    ||||    
T  40288333 tttc 40288336  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 10123148 - 10123051
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| |||||||| |||||||||||||||  | ||||| ||||  | |||| |||||||||||| ||||||||||||||||  || ||| ||||||||    
T  10123148 atgagcttaactcatttggtaagggataatt-acaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttc 10123051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 24134720 - 24134622
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  24134720 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 24134622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 29491517 - 29491566
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  29491517 tcggggttcgaaccccggacaccccacttattcactttaaag-tgaatttc 29491566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 34702409 - 34702311
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  |  ||| ||||||||||| |||||| ||||||||||  || ||||||||||||    
T  34702409 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatgaatttc 34702311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 34940509 - 34940436
Alignment:
Q  143 agtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactta 217  Q
    |||||| ||||||||||||||||||||||||| |||||| |  | || | ||||||||||| |||||||||||||    
T  34940509 agtttagctcacttggtaagggataatgcatattatatgcaggggtcag-gttcgaaccccggacaccccactta 34940436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 17350113 - 17350158
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  17350113 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 17350158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 25800412 - 25800331
Alignment:
Q  157 ggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||| ||| ||||||  |  ||| |||| |||||| |||||||||||||||||  |||||| ||||||||    
T  25800412 ggtaagggataatgcacaatttatgtagggtccggggttccaaccccggacaccccacttattcatcttaaaggtgaatttc 25800331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 39238768 - 39238813
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||    
T  39238768 gttcgaaccccggacaccccacttattcactttaaaagtgaatttc 39238813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 9931136 - 9931176
Alignment:
Q  190 ggagttcgaaccccagacaccccacttattcactttaaaga 230  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  9931136 ggagttcgaaccccaaacaccccacttattcaccttaaaga 9931176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 23368775 - 23368731
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||    
T  23368775 gttcgaaccccggacaccccacttattcacattaaaggtgaattt 23368731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 24168639 - 24168587
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||  || ||| |||||||||||||||||||||||||||||| |||||    
T  24168639 tatatgtagggaccggggttcgaaccccagacaccccacttattcaccttaaa 24168587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 27984999 - 27985051
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||||||||||||||||||||||||||| ||||| | | ||||| ||||||||    
T  27984999 tatatgtaaagatcggagttcgaaccccggacactctatttatttactttaaa 27985051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 52164461 - 52164369
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||| |||||||| ||||||||| ||||| || |  |||||| |||||||  || ||||||||||||||| | ||| ||| ||||||||    
T  52164461 ttaactcatttggtaagagataatgcacaatatgtgcagggatcggggttcgaattccggacaccccacttattaatttttaaggtgaatttc 52164369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 8893874 - 8893957
Alignment:
Q  155 ttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||||||||| ||||| |  |  | |||| |||||||||||| ||||||||||||||||  || ||| ||||||||    
T  8893874 ttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttc 8893957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 33844662 - 33844701
Alignment:
Q  186 gatcggagttcgaaccccagacaccccacttattcacttt 225  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  33844662 gatcggggttcgaaccccggacaccccacttattcacttt 33844701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 33949316 - 33949277
Alignment:
Q  186 gatcggagttcgaaccccagacaccccacttattcacttt 225  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  33949316 gatcggggttcgaaccccggacaccccacttattcacttt 33949277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 49619971 - 49620069
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||||| ||||| || |  | |||| ||||  ||||| ||||||||||||||||| |||||||| ||||||||    
T  49619971 atgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaag-tgaatttc 49620069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 52720703 - 52720781
Alignment:
Q  160 aagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca-ctttaaagatgaatttc 238  Q
    ||||||||||||||||| | ||||  ||  || |||||||||||||||||| |||||||||| |||||||| ||||||||    
T  52720703 aagggataatgcataatgtgtgtagggactggggttcgaaccccagacaccacacttattcatctttaaag-tgaatttc 52720781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 11213509 - 11213459
Alignment:
Q  176 tatatgtaaagatcggagttcgaaccccagacaccccacttattcacttta 226  Q
    |||||||| || | |||||||||||||| ||||||||||||||| ||||||    
T  11213509 tatatgtagaggttggagttcgaaccccggacaccccacttatttacttta 11213459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 12148621 - 12148571
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||| ||||||||||||||||||||||||  || ||| ||||||||    
T  12148621 tcggagttcaaaccccagacaccccacttattcatctttaaggtgaatttc 12148571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Complemental strand, 24253739 - 24253641
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||||||| |||||||||||||||||| |||| |  | ||||  |||||||| |||||| |  |||||||| | || ||||||||||||    
T  24253739 atgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacctcagacatcttacttattcgcctttaagatgaatttc 24253641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 42946543 - 42946465
Alignment:
Q  160 aagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||| |||||| |  |   || ||| ||||||| |||||||||||||||||| |||||| ||||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttc 42946465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 47719167 - 47719110
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaa 199  Q
    |||| |||||||| ||||||||| ||||||||||||||||| || | ||||||||||||    
T  47719167 tgagcttaactcagttggtaagg-ataatgcataatatatgcaaggttcggagttcgaa 47719110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 48260237 - 48260203
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  48260237 tcggagttcgaaccccggacaccccacttattcac 48260203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 49251443 - 49251409
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcac 222  Q
    |||| ||||||||||||||||||||||||||||||    
T  49251443 tcggggttcgaaccccagacaccccacttattcac 49251409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 50118977 - 50119050
Alignment:
Q  142 gagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||||||||||||||| |||| ||| |||| | |||| |  | |||||||||||||||| ||||||||||||    
T  50118977 gagtttaactcacttggta-gggacaatccatattttatgcaggggtcggagttcgaaccccggacaccccactt 50119050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 4126898 - 4126939
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||| |||| |||||||||||||||||| ||||||||    
T  4126898 atgagtttagctcatttggtaagggataatgcacaatatatg 4126939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 9639877 - 9639809
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacacc 210  Q
    |||| |||||||||||||||||| | ||||||||||||||| || |  ||||||||||||| | ||||||    
T  9639877 tgagcttaactcacttggtaagg-acaatgcataatatatgcaaggtccggagttcgaacctcggacacc 9639809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 12973374 - 12973333
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||| |||| |||||||||||||||||| ||||||||    
T  12973374 atgagtttagctcatttggtaagggataatgcacaatatatg 12973333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 19976595 - 19976550
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| |||||||||| |||||||||||||  ||||||||    
T  19976595 gttcgaaccccggacaccccacatattcactttaaaagtgaatttc 19976550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 21884627 - 21884656
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  21884627 gttcgaaccccagacaccccacttattcac 21884656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 25819237 - 25819282
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| || |||||||||||||||||||||  ||||||||    
T  25819237 gttcgaaccccggataccccacttattcactttaaaagtgaatttc 25819282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 30649145 - 30649174
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  30649145 gttcgaaccccagacaccccacttattcac 30649174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Complemental strand, 32711187 - 32711158
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  32711187 gttcgaaccccagacaccccacttattcac 32711158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 35111701 - 35111746
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||||||||  |||||||||||||||||||||||  ||||||||    
T  35111701 gttcgaacccctaacaccccacttattcactttaaaagtgaatttc 35111746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 38028585 - 38028618
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||||||||| |||||||||||||||||||    
T  38028585 cggagttcgaaccctagacaccccacttattcac 38028618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 40678875 - 40678920
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||    
T  40678875 gttcgatccccggacaccccacttattcactttaaaagtgaatttc 40678920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 47763432 - 47763383
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||| | |||| |||||||||||||||||||  ||||||||    
T  47763432 cggagttcgaacctcggacatcccacttattcactttaaaagtgaatttc 47763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 48497309 - 48497228
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattca 221  Q
    ||||||||| |||| |||||||||||||||||| ||||| || |  |  ||||||||||| ||| ||||| ||| |||||||    
T  48497309 atgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattca 48497228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 538376 - 538328
Alignment:
Q  189 cggagttcgaaccccagacaccccacttattcacttta-aagatgaatt 236  Q
    |||||||||||||||  ||||||||||||||||| ||| ||||||||||    
T  538376 cggagttcgaaccccgaacaccccacttattcaccttataagatgaatt 538328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 1813337 - 1813381
Alignment:
Q  167 aatgcataatatatgtaaagat-cggagttcgaaccccagacacc 210  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  1813337 aatgcataatatatgtaaaggtccggagttcgaaccccaaacacc 1813381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 2643863 - 2643823
Alignment:
Q  188 tcggagttcgaaccccagacaccccacttattcactttaaa 228  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  2643863 tcggggtttgaaccccagacaccccacttattcaccttaaa 2643823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 4865883 - 4865808
Alignment:
Q  146 ttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcac 222  Q
    |||||||| |||||| |||| | |||||||||||||||  | ||||||||||||||||  |||| |||||| |||||    
T  4865883 ttaactcagttggta-gggacattgcataatatatgtaggggtcggagttcgaaccccgaacactccacttcttcac 4865808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 12553246 - 12553278
Alignment:
Q  193 gttcgaaccccagacaccccacttattcacttt 225  Q
    ||||||||||| |||||||||||||||||||||    
T  12553246 gttcgaaccccggacaccccacttattcacttt 12553278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 14320924 - 14320968
Alignment:
Q  172 ataatatatgtaaagatcggagttcgaaccccagacaccccactt 216  Q
    ||||||||||||||| |||| |||||||| || ||||||||||||    
T  14320924 ataatatatgtaaaggtcggggttcgaactccggacaccccactt 14320968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 19396251 - 19396212
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  19396251 tgagtttaactcagttggta-gggataatgcataatatatg 19396212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 24631840 - 24631879
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  24631840 tgagtttaactcagttggtaa-ggataatgcataatatatg 24631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 27160495 - 27160535
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatg 181  Q
    |||||||| |||| || ||||||||||||||||||||||||    
T  27160495 tgagtttagctcatttagtaagggataatgcataatatatg 27160535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 32874447 - 32874392
Alignment:
Q  143 agtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaa 199  Q
    |||||| |||| ||||||||||  |||||||||||||||||||| |||| |||||||    
T  32874447 agtttagctcagttggtaagggc-aatgcataatatatgtaaagttcggggttcgaa 32874392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 38491045 - 38491113
Alignment:
Q  141 tgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacac 209  Q
    |||| |||||||||||| |||  || |||||||||| |||| | || |||||||||||| |||||||||    
T  38491045 tgagcttaactcacttgataacagacaatgcataatttatgcagaggtcggagttcgaatcccagacac 38491113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 17804 - 17731
Alignment:
Q  165 ataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||||||||| |  ||| |||||||||||| |||||||| |||||||||| ||| ||| ||||||||    
T  17804 ataatgcataatatatgcagggattggagttcgaacctcagacacctcacttattcatttttaaggtgaatttc 17731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 22468 - 22555
Alignment:
Q  150 ctcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaattt 237  Q
    |||||||||||||||||||| |||| ||||||||  |   |  |||||||||||||||| |||||||||||| ||| ||| |||||||    
T  22468 ctcacttggtaagggataatacatattatatgtaggggctgaggttcgaaccccagacatcccacttattcatttttaaggtgaattt 22555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 17974 - 17939
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaa 228  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17974 gttcgaaccccagacactccacttattcactttaaa 17939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 238
Target Start/End: Original strand, 419711 - 419809
Alignment:
Q  140 atgagtttaactcacttggtaagggataatgcataatatatgtaaagatcggagttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||| ||| |||| |||||||||||||||| | ||||| || |  |  ||| ||||||||||| |||||||||||||||||  || ||| ||||||||    
T  419711 atgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttc 419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 4849 - 4804
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||| ||| ||||||||||||||||||||||||  ||||||||    
T  4849 gttcgaatcccggacaccccacttattcactttaaaagtgaatttc 4804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 7128 - 7173
Alignment:
Q  193 gttcgaaccccagacaccccacttattcactttaaagatgaatttc 238  Q
    ||||||||||| ||||||||| ||||||||||||||  ||||||||    
T  7128 gttcgaaccccggacaccccatttattcactttaaaagtgaatttc 7173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 222
Target Start/End: Original strand, 1091 - 1120
Alignment:
Q  193 gttcgaaccccagacaccccacttattcac 222  Q
    ||||||||||||||||||||||||||||||    
T  1091 gttcgaaccccagacaccccacttattcac 1120  T

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