View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10309_low_5 (Length: 256)

Name: NF10309_low_5
Description: NF10309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10309_low_5
NF10309_low_5
[»] chr1 (32 HSPs)
chr1 (52-245)||(44720697-44720892)
chr1 (23-220)||(50107078-50107275)
chr1 (24-214)||(11060666-11060855)
chr1 (20-190)||(8975207-8975377)
chr1 (52-214)||(11059703-11059858)
chr1 (23-106)||(5782465-5782548)
chr1 (53-156)||(33342497-33342600)
chr1 (56-214)||(29766007-29766165)
chr1 (26-214)||(44719404-44719592)
chr1 (24-189)||(22856732-22856895)
chr1 (23-220)||(6612470-6612658)
chr1 (20-94)||(9341026-9341100)
chr1 (23-220)||(3117700-3117897)
chr1 (24-214)||(1001206-1001393)
chr1 (146-214)||(1407802-1407870)
chr1 (22-94)||(7945555-7945627)
chr1 (59-190)||(22857484-22857615)
chr1 (23-220)||(6613862-6614051)
chr1 (143-214)||(25038052-25038123)
chr1 (143-214)||(25043264-25043335)
chr1 (20-94)||(52440561-52440634)
chr1 (143-220)||(7944306-7944383)
chr1 (143-220)||(9339797-9339874)
chr1 (24-185)||(39726596-39726757)
chr1 (144-220)||(26518261-26518337)
chr1 (51-106)||(1407719-1407774)
chr1 (23-94)||(10333187-10333258)
chr1 (149-219)||(5782551-5782621)
chr1 (143-213)||(9340927-9340997)
chr1 (144-214)||(11830061-11830131)
chr1 (143-220)||(32665664-32665742)
chr1 (133-214)||(534429-534510)
[»] chr4 (25 HSPs)
chr4 (23-190)||(32244593-32244760)
chr4 (30-214)||(32244332-32244516)
chr4 (20-211)||(21623001-21623192)
chr4 (20-190)||(21621871-21622041)
chr4 (30-214)||(24745956-24746140)
chr4 (24-216)||(2786273-2786467)
chr4 (52-189)||(24753466-24753604)
chr4 (32-214)||(19050298-19050478)
chr4 (59-189)||(39869007-39869137)
chr4 (22-99)||(53770383-53770460)
chr4 (20-220)||(4703092-4703292)
chr4 (32-93)||(25810415-25810476)
chr4 (144-215)||(25810314-25810384)
chr4 (143-214)||(47874714-47874785)
chr4 (20-99)||(53771045-53771124)
chr4 (70-220)||(6039219-6039369)
chr4 (143-213)||(20599788-20599858)
chr4 (143-220)||(42278200-42278277)
chr4 (59-151)||(26170727-26170819)
chr4 (24-189)||(26172846-26173013)
chr4 (59-99)||(26685418-26685458)
chr4 (142-190)||(31844869-31844917)
chr4 (143-213)||(47878386-47878456)
chr4 (149-211)||(48739944-48740006)
chr4 (59-99)||(48740016-48740056)
[»] chr8 (38 HSPs)
chr8 (24-214)||(28524810-28525000)
chr8 (27-246)||(31075140-31075357)
chr8 (24-174)||(9626382-9626531)
chr8 (23-190)||(31074045-31074212)
chr8 (28-246)||(24198990-24199205)
chr8 (116-214)||(39138545-39138643)
chr8 (19-217)||(28005390-28005589)
chr8 (19-217)||(28062693-28062892)
chr8 (22-220)||(28006471-28006668)
chr8 (22-220)||(28063774-28063971)
chr8 (20-101)||(28619539-28619620)
chr8 (20-95)||(5965442-5965517)
chr8 (23-246)||(9625241-9625464)
chr8 (143-220)||(41121276-41121353)
chr8 (143-220)||(41122637-41122714)
chr8 (20-209)||(12637647-12637833)
chr8 (143-246)||(28526394-28526496)
chr8 (131-214)||(41754127-41754210)
chr8 (20-94)||(35178805-35178879)
chr8 (144-213)||(2552186-2552254)
chr8 (133-214)||(41754687-41754768)
chr8 (48-213)||(45476238-45476403)
chr8 (149-213)||(30134743-30134807)
chr8 (143-214)||(32898346-32898417)
chr8 (24-94)||(8569460-8569530)
chr8 (20-94)||(32898446-32898520)
chr8 (130-220)||(33315016-33315106)
chr8 (20-94)||(35177443-35177517)
chr8 (143-220)||(5737898-5737975)
chr8 (143-220)||(10406357-10406434)
chr8 (62-97)||(1952968-1953003)
chr8 (196-247)||(28525018-28525069)
chr8 (143-213)||(1952872-1952942)
chr8 (162-220)||(13144530-13144588)
chr8 (196-246)||(31074255-31074305)
chr8 (135-185)||(36032869-36032919)
chr8 (145-214)||(2561339-2561408)
chr8 (202-246)||(12637589-12637633)
[»] chr2 (47 HSPs)
chr2 (23-211)||(38853806-38853994)
chr2 (22-180)||(12746116-12746274)
chr2 (20-214)||(37607150-37607344)
chr2 (20-247)||(14887346-14887573)
chr2 (23-214)||(26586176-26586367)
chr2 (24-180)||(34582585-34582741)
chr2 (23-190)||(17466733-17466900)
chr2 (56-214)||(18675168-18675325)
chr2 (24-211)||(38854841-38855028)
chr2 (48-213)||(21733653-21733818)
chr2 (127-239)||(14886612-14886724)
chr2 (22-146)||(15441920-15442044)
chr2 (26-214)||(34037554-34037742)
chr2 (144-220)||(31443120-31443196)
chr2 (56-245)||(26585162-26585348)
chr2 (23-214)||(7412143-7412334)
chr2 (143-214)||(17330120-17330191)
chr2 (20-94)||(31091528-31091602)
chr2 (143-213)||(31091429-31091499)
chr2 (143-213)||(39016285-39016355)
chr2 (143-220)||(14704156-14704233)
chr2 (143-220)||(43380738-43380815)
chr2 (19-94)||(2910147-2910222)
chr2 (23-94)||(11985742-11985813)
chr2 (20-94)||(32766240-32766314)
chr2 (143-213)||(39015156-39015226)
chr2 (149-214)||(5914913-5914978)
chr2 (20-93)||(17330232-17330305)
chr2 (70-239)||(18676679-18676848)
chr2 (143-220)||(32765088-32765165)
chr2 (130-214)||(31442489-31442573)
chr2 (24-99)||(17466093-17466168)
chr2 (23-94)||(32764989-32765060)
chr2 (59-94)||(39016384-39016419)
chr2 (31-93)||(7073698-7073760)
chr2 (20-82)||(8420061-8420123)
chr2 (143-213)||(24459356-24459426)
chr2 (20-94)||(24459447-24459521)
chr2 (196-246)||(26586123-26586173)
chr2 (196-230)||(38854017-38854051)
chr2 (143-213)||(40000237-40000307)
chr2 (163-220)||(2911382-2911439)
chr2 (33-94)||(9616036-9616097)
chr2 (159-220)||(21732282-21732343)
chr2 (33-94)||(28864778-28864839)
chr2 (24-60)||(8420956-8420992)
chr2 (62-106)||(33161857-33161901)
[»] chr7 (51 HSPs)
chr7 (28-246)||(25621567-25621788)
chr7 (26-214)||(24288747-24288935)
chr7 (20-220)||(12223574-12223774)
chr7 (31-186)||(27067841-27067996)
chr7 (31-186)||(27210317-27210472)
chr7 (22-174)||(8879464-8879616)
chr7 (51-216)||(30917792-30917956)
chr7 (23-214)||(8048665-8048856)
chr7 (144-214)||(384991-385061)
chr7 (26-94)||(24844627-24844695)
chr7 (53-113)||(33060891-33060951)
chr7 (143-214)||(43461618-43461689)
chr7 (32-190)||(22621187-22621345)
chr7 (24-94)||(30925009-30925079)
chr7 (53-214)||(24287561-24287722)
chr7 (143-220)||(30924904-30924981)
chr7 (143-220)||(33607389-33607466)
chr7 (20-213)||(46286551-46286744)
chr7 (23-99)||(33607619-33607695)
chr7 (19-94)||(10899074-10899149)
chr7 (143-190)||(43457619-43457666)
chr7 (20-94)||(7258323-7258397)
chr7 (143-213)||(7258426-7258496)
chr7 (23-97)||(8374965-8375039)
chr7 (20-106)||(8375572-8375658)
chr7 (143-213)||(10898975-10899045)
chr7 (69-107)||(34707698-34707736)
chr7 (20-94)||(48646097-48646171)
chr7 (143-213)||(48788574-48788644)
chr7 (48-94)||(48788673-48788719)
chr7 (143-220)||(44334345-44334422)
chr7 (202-246)||(8870246-8870290)
chr7 (144-188)||(9365199-9365243)
chr7 (22-106)||(12220073-12220156)
chr7 (23-99)||(13578317-13578392)
chr7 (19-106)||(44529075-44529162)
chr7 (202-240)||(8870845-8870883)
chr7 (20-94)||(35727747-35727820)
chr7 (143-213)||(35727849-35727919)
chr7 (59-93)||(43461730-43461764)
chr7 (143-213)||(44333288-44333358)
chr7 (20-94)||(44334450-44334524)
chr7 (147-213)||(48646204-48646269)
chr7 (143-213)||(48647345-48647415)
chr7 (20-94)||(48647444-48647518)
chr7 (160-213)||(24934965-24935018)
chr7 (149-190)||(34710308-34710349)
chr7 (150-214)||(2677094-2677158)
chr7 (59-99)||(6680529-6680569)
chr7 (150-190)||(24935617-24935657)
chr7 (59-171)||(34888847-34888959)
[»] chr5 (27 HSPs)
chr5 (73-212)||(32555430-32555568)
chr5 (20-99)||(9538045-9538124)
chr5 (23-99)||(16611779-16611855)
chr5 (57-220)||(9537107-9537270)
chr5 (55-189)||(35538207-35538341)
chr5 (143-213)||(545938-546008)
chr5 (30-96)||(18004696-18004762)
chr5 (23-137)||(30970543-30970657)
chr5 (143-220)||(2464820-2464897)
chr5 (150-214)||(13651042-13651106)
chr5 (159-214)||(31946934-31946989)
chr5 (20-94)||(4592909-4592983)
chr5 (20-94)||(8074499-8074573)
chr5 (20-106)||(25590479-25590564)
chr5 (143-213)||(25590581-25590651)
chr5 (147-213)||(32640443-32640509)
chr5 (142-214)||(19183111-19183183)
chr5 (131-190)||(19186134-19186193)
chr5 (144-214)||(578653-578723)
chr5 (143-213)||(8074601-8074671)
chr5 (48-94)||(14891148-14891194)
chr5 (143-213)||(40611411-40611481)
chr5 (143-213)||(40612561-40612631)
chr5 (144-213)||(37072730-37072799)
chr5 (159-219)||(19271674-19271734)
chr5 (116-220)||(34173404-34173508)
chr5 (62-94)||(40611350-40611382)
[»] chr3 (31 HSPs)
chr3 (19-220)||(36827350-36827551)
chr3 (24-208)||(40205934-40206118)
chr3 (20-106)||(47118040-47118126)
chr3 (143-216)||(2591776-2591849)
chr3 (20-99)||(19114581-19114660)
chr3 (23-181)||(3671089-3671247)
chr3 (143-213)||(55389371-55389441)
chr3 (20-93)||(2591675-2591748)
chr3 (61-106)||(47075340-47075385)
chr3 (22-94)||(17700568-17700640)
chr3 (20-106)||(49261526-49261609)
chr3 (20-99)||(36279000-36279079)
chr3 (23-94)||(36280318-36280389)
chr3 (20-94)||(17701920-17701994)
chr3 (20-94)||(48573033-48573107)
chr3 (143-213)||(48573136-48573206)
chr3 (143-213)||(48808523-48808593)
chr3 (143-213)||(48809557-48809627)
chr3 (20-93)||(11773053-11773126)
chr3 (53-94)||(27204167-27204208)
chr3 (143-220)||(48574354-48574431)
chr3 (144-220)||(55388211-55388287)
chr3 (167-246)||(29188240-29188319)
chr3 (20-99)||(45600935-45601013)
chr3 (59-94)||(53959101-53959136)
chr3 (20-94)||(48574460-48574534)
chr3 (143-213)||(53959002-53959072)
chr3 (143-212)||(17700670-17700739)
chr3 (143-220)||(36279103-36279180)
chr3 (143-220)||(52318212-52318289)
chr3 (30-106)||(29188379-29188455)
[»] scaffold0767 (2 HSPs)
scaffold0767 (23-214)||(5650-5839)
scaffold0767 (163-220)||(6128-6185)
[»] scaffold0039 (2 HSPs)
scaffold0039 (22-106)||(79672-79756)
scaffold0039 (70-106)||(79171-79207)
[»] scaffold0237 (2 HSPs)
scaffold0237 (58-218)||(3032-3193)
scaffold0237 (58-218)||(1771-1931)
[»] chr6 (11 HSPs)
chr6 (58-218)||(29856830-29856991)
chr6 (55-103)||(6752653-6752701)
chr6 (58-218)||(29845566-29845726)
chr6 (53-180)||(5265280-5265406)
chr6 (131-214)||(30748149-30748232)
chr6 (61-99)||(31219156-31219194)
chr6 (27-86)||(12676479-12676538)
chr6 (26-189)||(29350115-29350278)
chr6 (20-65)||(6468811-6468856)
chr6 (53-190)||(19600149-19600285)
chr6 (26-99)||(31219009-31219082)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-185)||(142321-142454)
[»] scaffold0369 (1 HSPs)
scaffold0369 (30-94)||(9137-9201)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-87)||(116103-116170)


Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 52 - 245
Target Start/End: Complemental strand, 44720892 - 44720697
Alignment:
Q  52 ctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaaggg--tatgagg 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  44720892 ctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacgtgacaaaagtcttatgctgacaaagggtatatgagg 44720793  T
Q  150 tgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttctt 245  Q
    ||||||||||||||||||||||||| ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44720792 tgtcacactgactaaagtgaaagtagaaaattgtcactttggttcttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttctt 44720697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 50107275 - 50107078
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||| ||||||||||||||||  | |||||||||||||||||||| ||||||||||||||  || |||||||||||| | ||||  |||||| |||||||    
T  50107275 ctgattcaggattaaatacaaaatagtctctgaatgtgcacttccgttatcactttagtccttggcgttaaataattatgttaactgatgacatgacaaa 50107176  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
     || |||||||||||| | |||||||||||||||  |||||| |||||||||  | || ||||||||| || || |||||||||| |||||| |||||    
T  50107175 ggttttatgctgacaaggagtatgaggtgtcacatggactaacgtgaaagtaggacatggtcactttggtcctttaaccgaaaattaatatccccaaa 50107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 11060855 - 11060666
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||||  |||||||||||  | ||| ||||||| |||||| | |||||||||||||| | |||||||||||||| | ||||  |||||| ||  |||     
T  11060855 tgactcaaaattaaatacaaaatagtccctgaatgggcactttcgttatcactttagtccccgacgttaaataattctgttaactgatgacgtggaaaag 11060756  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    || |||| ||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||| ||  ||||| |||||||||||||    
T  11060755 gttttattctgacaaggggtatgaggt-tcacaatgactaaagtgaaagtagaaaattgtcactttgatccctgaacagaaaatcaatatc 11060666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 8975207 - 8975377
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||||||| ||||||||| || || |||  ||||| ||||||| | ||||||||||||||| || |||||||||||||| ||||  |||||  ||||    
T  8975207 tccctgactcaagattaaatataaagtagtccatgaatatgcactttcgttatcactttagtctttggcgttaaataattttgttaattgatgatatgac 8975306  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    ||| || |||||| ||||| | ||||||| |||||||  |||||||||||||||| ||||| |||||||||    
T  8975307 aaatgttttatgccgacaaggagtatgagatgtcacagggactaaagtgaaagtagaaaatggtcactttg 8975377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 11059703 - 11059858
Alignment:
Q  52 ctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtg 151  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||||||| | ||       ||| |||||||||| ||||| |||||| | ||||||||||    
T  11059703 ctgaatgtgtacttccatgatcactttaatctctgacgttaaataattatgtt-------gacgtgacaaaagttttatggtgacaaggagtatgaggtg 11059795  T
Q  152 tcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||  |||||||||| | ||||||||||||||||||| ||  | |||||||||| ||||||    
T  11059796 tcacagggactaaagtggaggtaaaaaattgtcactttgatccctcaaccgaaaattaatatc 11059858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 5782465 - 5782548
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||| |||||||||||| |  |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5782465 ctgactcatgattaaatacaaagaagtctctgattatgcacttcccttatcactttagtctctgacgttaaataattttattaa 5782548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 33342497 - 33342600
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgt 152  Q
    ||||||||||| | | ||||||||||||||||||||||||||||||| | ||||  |||||  |||||||||| |||||||||||| | |||||||||||    
T  33342497 tgaatgtgcacatacgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgacaaaagttttatgctgacaaggagtatgaggtgt 33342596  T
Q  153 caca 156  Q
    ||||    
T  33342597 caca 33342600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 29766007 - 29766165
Alignment:
Q  56 atgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcac 155  Q
    |||||||||||  ||||||||||||||| |   ||||||||||||| ||||  |||||  | ||||| || |||||||||||||  |||||||||||||     
T  29766007 atgtgcacttctgttatcactttagtctatagtgttaaataattttgttaattgatgatgtaacaaatgttttatgctgacaaatagtatgaggtgtcat 29766106  T
Q  156 actgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    | | |||||||||||| || ||||||||||||||| ||  |||||  ||||||||||||    
T  29766107 agttactaaagtgaaaatagaaaattgtcactttggtccctgaacaaaaaatcaatatc 29766165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 44719404 - 44719592
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagt 125  Q
    ||||||||||||||| || || || | ||||| ||||||||| |||||| ||||||||||| | |||||||||||| || |  ||||   || |||| ||    
T  44719404 actcaggattaaatataaagtagtttatgaatatgcacttccgttatcattttagtctctgtctttaaataattttgttcattgatgttgtggcaaaggt 44719503  T
Q  126 cttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     ||||||| |||| |||||  | ||||||||   |||||| |||||||| ||||||||||||||| ||  ||||| |||||||||||||    
T  44719504 tttatgctaacaaggggtacaatgtgtcacatgaactaaaatgaaagtagaaaattgtcactttgctccctgaactgaaaatcaatatc 44719592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 22856732 - 22856895
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||||||||||||||||| |  |||||| | | ||||||||| |||||||||||||||| |||||||||||||| | ||||  ||| |  ||||| ||    
T  22856732 tgactcaggattaaatacaaagaagtctctaactctgcacttccgttatcactttagtctccgacgttaaataattatgttaagtgattatgtgacacaa 22856831  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcacttt 189  Q
     | ||| | |||||  |  ||||||||||||||  |||||||||||||||| |||||  |||||||    
T  22856832 attttacgatgacatggcatatgaggtgtcaca--gactaaagtgaaagtagaaaatgatcacttt 22856895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 6612470 - 6612658
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| ||||||||||||    |||||||| | ||||||||||||||||||||| || |||||||||||||||||| ||||  ||| |  ||||       
T  6612470 ctgactcatgattaaatacaaacaagtctctgactctgcacttccattatcactttaatccctgacgttaaataattttgttaagtgattatgtgac--- 6612566  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
          |||||||||| |  ||||||||||||||  ||||||| | |||||| |||||  |||||||  || ||||||| |||||||||||| |||||    
T  6612567 ------atgctgacaaggaatatgaggtgtcacagggactaaattcaaagtagaaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaa 6612658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 9341100 - 9341026
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    |||||||| | ||||||||  ||||||||||||||||||||||||||    
T  9341100 tccctgactcaggattaaatacaaataagtctctgactttgcacttctgttatcactttagtctctgacgttaaa 9341026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 3117700 - 3117897
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| |||||||||||| |   ||||||| | | ||||||| ||||||||||||  ||||| ||||||||||||| ||||  |||||  ||||| |    
T  3117700 ctgactcaagattaaatacaaagaaatctctgactctccacttccgttatcactttagcgtctgaagttaaataattttgttaattgatgatgtgacaca 3117799  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
     || ||| | || ||     |||||||||||||| ||||||||||||||||| |||||  ||| |||  || ||||||| ||||| |||||| |||||    
T  3117800 tgttttacgatggcatgacatatgaggtgtcacaatgactaaagtgaaagtagaaaatgatcattttagtccttgaaccaaaaattaatatccccaaa 3117897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 1001206 - 1001393
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||| ||||||||||||| || |||||||||||||||||||  |||||| |||||||| |  |   ||| | |||| ||||  |||||  ||||||      
T  1001206 tgactcgggattaaatacaaagtagtctctgaatgtgcacttctgttatcagtttagtctatagc---aaaaacttttgttaattgatgaggtgacaatt 1001302  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
       |||||||||||| |   |  ||||||||||  |||||||||||||||| ||||| || |||||| || ||||||||||||||||||||    
T  1001303 actttatgctgacaaggtacacaaggtgtcacatggactaaagtgaaagtagaaaatagttactttgatccttgaaccgaaaatcaatatc 1001393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 1407802 - 1407870
Alignment:
Q  146 gaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| || ||||||||||||| ||||||    
T  1407802 gaggtgtcacatggactaaagtgaaagtagaaaattatcactttggtccttgaaccgaaaattaatatc 1407870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 7945627 - 7945555
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||    |||||||| | ||||||||| |||||||||||||| |||||||||||    
T  7945627 cctgactcaggattaaatacaaataagtctctgactatgcacttccgttatcactttagtccctgacgttaaa 7945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 22857615 - 22857484
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacact 158  Q
    ||||||||| ||||||||||||||  ||||||||||||||| | ||||  |||||  ||||| |||| ||||  |||||     ||||||||||||||      
T  22857615 tgcacttccgttatcactttagtccatgacgttaaataattatgttaagtgatgatgtgacacaagttttataatgacatgacatatgaggtgtcacatg 22857516  T
Q  159 gactaaagtgaaagtaaaaaattgtcactttg 190  Q
    |||||||||||||||| ||| | |||||||||    
T  22857515 gactaaagtgaaagtagaaactagtcactttg 22857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 6614051 - 6613862
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagt-ctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    |||||||||||||||||||||    |||||||| | ||||||||  |||||| |||||| ||| |||||||||||||||| ||||  |||||  ||||      
T  6614051 ctgactcaggattaaatacaaataagtctctgactctgcacttcagttatcattttagtcctccgacgttaaataattttgttaagtgatgatgtgac-- 6613954  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
           ||||||||||   ||||| ||| |||||  ||||||||||||||||  ||||| | |||||||||  |||||| |||||||||||| |||||    
T  6613953 -------atgctgacaagcagtatggggtttcacagggactaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaa 6613862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 25038052 - 25038123
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||||   ||||||||||||||| |||||| |||||||| ||  |||||| ||||||||||||    
T  25038052 tatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatc 25038123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 25043264 - 25043335
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||||   ||||||||||||||| |||||| |||||||| ||  |||||| ||||||||||||    
T  25043264 tatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatc 25043335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 52440634 - 52440561
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||| ||||||||||||| ||    |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  52440634 tccctgagtcaggattaaatataaataagtctctgactctgcacttccattatcactttagtct-tgacgttaaa 52440561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 7944306 - 7944383
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| |||||| |||||||| ||  || ||| |||||||||||| |||||    
T  7944306 tatgaggtgtcacatagaccaaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaa 7944383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 9339797 - 9339874
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||| |||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  9339797 tatgagatgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaa 9339874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 185
Target Start/End: Complemental strand, 39726757 - 39726596
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    ||||| ||||||||||| || || ||||||||| ||||| |||  |||||| |||||||| ||||||| || | |||| ||||  |||||  ||||||      
T  39726757 tgacttaggattaaatataaagtagtctctgaaagtgcatttcgtttatcagtttagtctttgacgttgaaaatttttgttaattgatgaggtgacaagt 39726658  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtca 185  Q
    || ||  |||||||| | ||| ||||| ||| |  |||||||||||||||| ||||| ||||    
T  39726657 gttttgagctgacaaggtgtacgaggtatcatatagactaaagtgaaagtagaaaatagtca 39726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 26518261 - 26518337
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||||   | ||||||||| ||| ||||| ||||||||| ||  ||||||||||| |||||||||||||    
T  26518261 atgaggtgtcacataaattaaagtgaaggtagaaaatggtcactttggtctctgaaccgaaaaccaatatctccaaa 26518337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 1407719 - 1407774
Alignment:
Q  51 tctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    ||||||| |||||||   |||||||||||||| |||||||||||||||||| ||||    
T  1407719 tctgaatatgcacttatgttatcactttagtccctgacgttaaataattttgttaa 1407774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 10333258 - 10333187
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||| ||||||||||||    |||||||| | ||||||||| |||||||||||||||||  |||||||    
T  10333258 ctgactcaagattaaatacaaataagtctctgactctgcacttccgttatcactttagtctctagcgttaaa 10333187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 5782551 - 5782621
Alignment:
Q  149 gtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaa 219  Q
    ||||||||  ||||||||||||| |||||||||||||||||  ||  | |||| |||||||||||| ||||    
T  5782551 gtgtcacatggactaaagtgaaactaaaaaattgtcactttaatccctaaaccaaaaatcaatatccccaa 5782621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9340997 - 9340927
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| ||| |||||||    
T  9340997 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatat 9340927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 11830061 - 11830131
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||||||||  || ||||||||||||| ||||| |||| |||| || | ||||| ||||||||||||    
T  11830061 atgaggtgtcacatggattaaagtgaaagtagaaaatggtcattttgatcctagaaccaaaaatcaatatc 11830131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 32665742 - 32665664
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaac-cgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  ||||| | |||||||||||| |||||    
T  32665742 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaa 32665664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 534510 - 534429
Alignment:
Q  133 tgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||| | |||||| |||||||   ||||||||||||||||||||||  |||||||| ||   ||| ||||||||||||||    
T  534510 tgacaaggagtatgacgtgtcacggggactaaagtgaaagtaaaaaatgatcactttgatccacgaatcgaaaatcaatatc 534429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 32244760 - 32244593
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||| ||||||||||| |||| || |||  ||||||||||| ||| |||||||||||||| |||||||||||||||||| ||||  |||||| |||||||    
T  32244760 ctgattcaggattaaagacaaagtagtccttgaatgtgcacatccgttatcactttagtccctgacgttaaataattttgttaaccgatgacgtgacaaa 32244661  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
      | |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  32244660 gattttatgctgacaaggagtatgaggtgtcacagtgactaaagtgaaagtaaaaaattgttactttg 32244593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 214
Target Start/End: Original strand, 32244332 - 32244516
Alignment:
Q  30 aggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtctta 129  Q
    ||||||||| |||| || |||  | ||||||||||||| |||||||||| |||  | ||||||||||||| | ||||  ||||||  ||| || || |||    
T  32244332 aggattaaagacaaagtagtcattaaatgtgcacttccgttatcactttggtccataacgttaaataattatgttaagtgatgacgcgacgaaggtttta 32244431  T
Q  130 tgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||||||||| ||||||||| ||  || ||||||||||||||||    
T  32244432 tgctgacaaagagtatggggtgtcacagagactaaagtgaaagtaaaaaatggtcactttgatctctgcaccgaaaatcaatatc 32244516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 21623192 - 21623001
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||| ||||||||||||||||  | |||  ||||||||||||||  |||||||||||||| | |||||||||||||| | ||||   ||||  || |    
T  21623192 tccctgattcaggattaaatacaaaatagtccttgaatgtgcacttctgttatcactttagtccccgacgttaaataattatgttaactaatgatgtggc 21623093  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaat 211  Q
    | |||| |||| ||||||| | |||||||||||||||  ||||||| |||||||| ||||| ||||||||| ||  ||||||||||||||||    
T  21623092 acaagttttatactgacaaggagtatgaggtgtcacagagactaaaatgaaagtagaaaatggtcactttgctctatgaaccgaaaatcaat 21623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 21621871 - 21622041
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||||||||||||||||||||  | |||  ||||||||||||||| |||||||||||||| |||| ||||||||||| | ||||  |||||  ||||    
T  21621871 tccctgactcaggattaaatacaaaatagtcattgaatgtgcacttccgttatcactttagtccctgatgttaaataattatgttaactgatgatgtgac 21621970  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    |||  | ||| |||||| | | |||||| ||||||||   ||||||||||||||| ||||| |||||||||    
T  21621971 aaagattttacgctgacgaggagtatgatgtgtcacaagcactaaagtgaaagtataaaatggtcactttg 21622041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 24746140 - 24745956
Alignment:
Q  30 aggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtctta 129  Q
    |||||||||||||| ||  ||  | ||||||||||||| ||||||||||| ||   |||||||||||||||||||||   |  |  |||||||||| |||    
T  24746140 aggattaaatacaaagtactccttaaatgtgcacttccgttatcactttaatccacgacgttaaataattttattaactcacaatgtgacaaaagtttta 24746041  T
Q  130 tgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||  |||| | |||||||||||||| ||||||||||||| || |||||| |||||||| ||  ||||||| |||| ||||||    
T  24746040 tgctggaaaagagaatgaggtgtcacacagactaaagtgaaaatagaaaattatcactttggtccctgaaccggaaattaatatc 24745956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 2786273 - 2786467
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtc-tc-tgacgttaaataattttattaaaagatgacctgacaa 121  Q
    ||||||||||||||||||||  |  ||  ||||||||||||||| |||||| ||||||  || ||||||||||||||||| ||||  ||| |  ||||||    
T  2786273 tgactcaggattaaatacaaattactccttgaatgtgcacttccgttatcattttagttatcatgacgttaaataattttgttaactgataatgtgacaa 2786372  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctc 216  Q
    |  |  |||||| |||||| |||||| |||||| |  || |||||| |||||| ||||| ||||||||| ||  |||||||||||||||||||||    
T  2786373 agattgtatgctcacaaagagtatgaagtgtcatatggattaaagtaaaagtagaaaatggtcactttggtctctgaaccgaaaatcaatatctc 2786467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 24753604 - 24753466
Alignment:
Q  52 ctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtg 151  Q
    |||||||||||||||  ||||||||||||||  |  |||||||||||||| ||||  |||||  || ||||||| |||||||| ||||| |  |||||||    
T  24753604 ctgaatgtgcacttctgttatcactttagtcattcgcgttaaataattttgttaactgatgatgtggcaaaagttttatgctgtcaaagagattgaggtg 24753505  T
Q  152 tcacactgactaaagtgaaagtaa-aaaattgtcacttt 189  Q
    ||||   ||||||||||||||||| ||||||||||||||    
T  24753504 tcacggagactaaagtgaaagtaaaaaaattgtcacttt 24753466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 19050298 - 19050478
Alignment:
Q  32 gattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatg 131  Q
    |||||||||||| |  ||||| || | ||||||||| |||||||||||||||| |||||||||||||| ||||||  |||||  ||||  | || ||| |    
T  19050298 gattaaatacaaagaagtctcggactctgcacttccgttatcactttagtctccgacgttaaataattctattaagtgatgatgtgac--atgttttacg 19050395  T
Q  132 ctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     ||| |  |  ||||||||||||||  |||||||||||||||| |||||  |||||||| || ||||| | ||||||||||||    
T  19050396 atgatatggcatatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatc 19050478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 189
Target Start/End: Original strand, 39869007 - 39869137
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacact 158  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||  |||||  ||||| |  | ||||| |||||     ||| |||||||||| |    
T  39869007 tgcacttccgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgacacatattttatgatgacatgacatatcaggtgtcacaat 39869106  T
Q  159 gactaaagtgaaagtaaaaaattgtcacttt 189  Q
    ||||||| |||||||| ||||| ||||||||    
T  39869107 gactaaattgaaagtataaaatagtcacttt 39869137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 53770383 - 53770460
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||||| ||||||||||| |  |||| ||| | |||||||||||||||||| ||||||||| ||||||||||||    
T  53770383 cctgactcagaattaaatacaaagaagtctatgactctgcacttccattatcactctagtctctgccgttaaataatt 53770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 4703292 - 4703092
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||| |||||| ||||||||||| |  |||| ||| ||| ||||||| |||||||||||||||||| | |||||||||| ||||||  |||||  ||      
T  4703292 tccctaactcagaattaaatacaaagaagtctttgactgtacacttccgttatcactttagtctctggcattaaataattctattaagtgatgatgtggt 4703193  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaa 219  Q
       ||| ||||| ||||      |||||| ||||| |  |||||||||||||||| ||||||||||||||| ||  ||| || |||||||||||| ||||    
T  4703192 gcgagttttatgatgacgtgacatatgagatgtcatatggactaaagtgaaagtataaaattgtcactttggtccctgacccaaaaatcaatatccccaa 4703093  T
Q  220 a 220  Q
    |    
T  4703092 a 4703092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 25810476 - 25810415
Alignment:
Q  32 gattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaa 93  Q
    |||||||||||| || | || |||||||||||||||  ||||||||||||||||||||||||    
T  25810476 gattaaatacaaagtagcctatgaatgtgcacttccgctatcactttagtctctgacgttaa 25810415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 25810384 - 25810314
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatct 215  Q
    |||||||||||||  |||||||||||||||| ||||| |||| |||| || |||||| ||||||||||||||    
T  25810384 atgaggtgtcacatggactaaagtgaaagtataaaatagtca-tttggtctttgaactgaaaatcaatatct 25810314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 47874714 - 47874785
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||| ||||||||  ||| |||||||||||| ||||| ||||||||| || ||||||| ||||||||||||    
T  47874714 tatgatgtgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatc 47874785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 53771124 - 53771045
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||||||| ||||||||||| |  | | |||| | ||||||||| ||||||||||||||  |||||||||||||||    
T  53771124 tccctgactcagaattaaatacaaagaagcccctgactctgcacttccgttatcactttagtcattgacgttaaataatt 53771045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 6039219 - 6039369
Alignment:
Q  70 tatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtga 169  Q
    ||||| |||||||  || ||||||  || ||| ||||| |||||| ||||| |  | |||||||||||| | ||||||||||||| |  ||| |||||||    
T  6039219 tatcattttagtccgtgccgttaataaaatttgttaaatgatgacgtgacacatattttatgctgacaatgagtatgaggtgtcatagggaccaaagtga 6039318  T
Q  170 aagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
      ||| ||||| ||||||||| ||  |||||||||||| |||||| |||||    
T  6039319 gtgtagaaaatggtcactttgctccctgaaccgaaaattaatatccccaaa 6039369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 20599858 - 20599788
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||||||| |||||||||||||| ||||||||| ||  |||||| ||||| |||||    
T  20599858 tatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtccctgaaccaaaaattaatat 20599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 42278200 - 42278277
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| ||||||||| || ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  42278200 tatgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaa 42278277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 26170727 - 26170819
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtg 151  Q
    ||||||||||||||||||||||||  ||  |||||| |||||| ||||  |||||  ||||| | || |||||||||||| | ||||||||||    
T  26170727 tgcacttccattatcactttagtccatgctgttaaaaaattttgttaagtgatgatgtgacacatgttttatgctgacaaggagtatgaggtg 26170819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 26173013 - 26172846
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaa--gatgacctgacaa 121  Q
    ||||||| ||||||||||||    |||||||| | ||||||||| ||||||||||||||  || ||||||| |||| | ||||||  ||| |  || ||     
T  26173013 tgactcaagattaaatacaaataagtctctgactctgcacttccgttatcactttagtccatgccgttaaaaaattatgttaaaagtgataatgtggcac 26172914  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcacttt 189  Q
    | || |||||   |||| | ||||||||||||||| |||||||||||| |||| |||||  |||||||    
T  26172913 atgttttatgtcaacaaggagtatgaggtgtcacaatgactaaagtgacagtagaaaataatcacttt 26172846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 26685458 - 26685418
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  26685458 tgcacttccgttatcactttagtctctgacattaaataatt 26685418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 31844917 - 31844869
Alignment:
Q  142 gtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    |||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  31844917 gtatgacgtgtcacaaggactaaagtgaaagtaaaaaatggtcactttg 31844869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 47878456 - 47878386
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||| |  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  47878456 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 47878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 48740006 - 48739944
Alignment:
Q  149 gtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaat 211  Q
    ||||||||  |||||||||||||||||||||| ||||||||  ||  |||||| |||||||||    
T  48740006 gtgtcacaaagactaaagtgaaagtaaaaaatagtcactttagtccctgaaccaaaaatcaat 48739944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 48740056 - 48740016
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||||  |||||||||||||| ||||||||||||||||    
T  48740056 tgcacttctgttatcactttagtccctgacgttaaataatt 48740016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 28524810 - 28525000
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||||||||||||||||| ||  ||  ||||||||||||||| |||||| |||||||||||||||||||||||||| ||||  |||||  || ||||     
T  28524810 tgactcaggattaaatacaaagtaatccttgaatgtgcacttccgttatcattttagtctctgacgttaaataattttgttaactgatgatgtggcaaag 28524909  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     | ||||| |||||||| |||||| |||||| |  ||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  28524910 attttatgttgacaaagagtatgaagtgtcagatggactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatc 28525000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 246
Target Start/End: Complemental strand, 31075357 - 31075140
Alignment:
Q  27 ctcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtc 126  Q
    ||||| |||||||||||  | ||| |||||| || ||| || |||||||||||||| |||||||||||||||| ||||||  |||||| ||||||| ||     
T  31075357 ctcagcattaaatacaaaatagtc-ctgaatatgtactcccgttatcactttagtcactgacgttaaataattatattaactgatgacgtgacaaaggtt 31075259  T
Q  127 ttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgtt 226  Q
    ||||| |||||| | ||| |||||||||||  ||||||| |||||||| ||| | ||||||||| ||  ||||| ||||||||||||| | ||||||||     
T  31075258 ttatggtgacaaggagtacgaggtgtcacaaggactaaa-tgaaagtagaaagtggtcactttggtccctgaactgaaaatcaatatcccaaaactcgtc 31075160  T
Q  227 ccaacaaagtgttgttcttc 246  Q
    ||||| |||| ||| |||||    
T  31075159 ccaacgaagtattgatcttc 31075140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 174
Target Start/End: Complemental strand, 9626531 - 9626382
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||||| |||||||||||||| |||  ||||| ||| ||||| |||| |||||||| |||||||||||||||| |  ||||  |||||  ||||||||    
T  9626531 tgactcagaattaaatacaatgtagtcattgaatatgcgcttccgttattactttagtttctgacgttaaataatatg-ttaaccgatgatgtgacaaaa 9626433  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagta 174  Q
    || |||||||||||||| |||||||||||||||   |||||||||||||||    
T  9626432 gttttatgctgacaaagagtatgaggtgtcacatgaactaaagtgaaagta 9626382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 31074045 - 31074212
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    ||||||| ||||||||| ||| || || ||||||||||||||||  ||||||||||||||||||   |||||||||||| ||||  |||||  || ||||    
T  31074045 ctgactctggattaaatgcaaagtagtttctgaatgtgcacttctgttatcactttagtctctggaattaaataattttgttaactgatgatgtggcaaa 31074144  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
     || ||||||| |||| ||||||||||||||||   ||||||||||||| || |||||  ||||||||    
T  31074145 tgttttatgctaacaaggggtatgaggtgtcacggggactaaagtgaaaatagaaaatgatcactttg 31074212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 24198990 - 24199205
Alignment:
Q  28 tcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtct 127  Q
    |||||||||||||||| ||  ||  ||||||||||||||| ||||||||||||||| |  |||| ||||||| | ||    |||||| |  |||| || |    
T  24198990 tcaggattaaatacaaagtaatcattgaatgtgcacttccgttatcactttagtctttttcgttgaataattatgtt----gatgacgtagcaaatgttt 24199085  T
Q  128 tatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccg-aaaatcaatatctccaaactcgtt 226  Q
    ||||||||||| |||||||||||||||||   |||||||||||||||||||||  ||| |||| ||  |||| || |||||||||||| |||||| ||      
T  24199086 tatgctgacaaggggtatgaggtgtcacagatactaaagtgaaagtaaaaaatgatcattttggtccctgaatcgaaaaatcaatatccccaaacccgcc 24199185  T
Q  227 ccaacaaagtgttgttcttc 246  Q
    ||||| |||||||| |||||    
T  24199186 ccaacgaagtgttgctcttc 24199205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 39138643 - 39138545
Alignment:
Q  116 tgacaaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||| ||||| ||||||||| |  ||| ||||||||||||||||    
T  39138643 tgacaaaagttttatgctgacaaagtgtatgaggtgtcacaaggactaaagtgaaagtagaaaatggtcactttgattcttgtaccgaaaatcaatatc 39138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 28005390 - 28005589
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctga 118  Q
    |||||||||||||||| |||||||| || ||| | |||||||| |||    ||||||||||||||| || ||||||||||| | | ||  |||||  ||     
T  28005390 atccctgactcaggatcaaatacaaagtagtccccgaatgtgctcttatgatatcactttagtctccgatgttaaataattatgtgaattgatgatgtgg 28005489  T
Q  119 caaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaa-ttgtcactttgttcgttgaaccgaaaatcaatatctcc 217  Q
    ||||||| |||| || |||||| |||| |||||||| |  ||||||||||||||||||||| ||  ||||||| ||  |||||| ||||| |||||||||    
T  28005490 caaaagttttatactaacaaagagtataaggtgtcataaggactaaagtgaaagtaaaaaatttaccactttggtccctgaaccaaaaattaatatctcc 28005589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 28062693 - 28062892
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctga 118  Q
    |||||||||||||||| |||||||| || ||| | |||||||| |||    ||||||||||||||| || ||||||||||| | | ||  |||||  ||     
T  28062693 atccctgactcaggatcaaatacaaagtagtccccgaatgtgctcttatgatatcactttagtctccgatgttaaataattatgtgaattgatgatgtgg 28062792  T
Q  119 caaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaa-ttgtcactttgttcgttgaaccgaaaatcaatatctcc 217  Q
    ||||||| |||| || |||||| |||| |||||||| |  ||||||||||||||||||||| ||  ||||||| ||  |||||| ||||| |||||||||    
T  28062793 caaaagttttatactaacaaagagtataaggtgtcataaggactaaagtgaaagtaaaaaatttaccactttggtccctgaaccaaaaattaatatctcc 28062892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 28006668 - 28006471
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    ||||| |||| |||||||| || || |||  |||||||| |||||| |||||||||||  | |||||||||||||||| | ||||  |||||  ||||||    
T  28006668 cctgaatcagaattaaatataaagtagtccttgaatgtgtacttccgttatcactttaacccctgacgttaaataattctgttaactgatgatatgacaa 28006569  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||| |||||||||||  | |||||| || |||||  ||||||||||||| || ||| | ||||||||| ||  |||||  |||||||||||| |||||    
T  28006568 aagt-ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 220
Target Start/End: Complemental strand, 28063971 - 28063774
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    ||||| |||| |||||||| || || |||  |||||||| |||||| |||||||||||  | |||||||||||||||| | ||||  |||||  ||||||    
T  28063971 cctgaatcagaattaaatataaagtagtccttgaatgtgtacttccgttatcactttaacccctgacgttaaataattctgttaactgatgatatgacaa 28063872  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||| |||||||||||  | |||||| || |||||  ||||||||||||| || ||| | ||||||||| ||  |||||  |||||||||||| |||||    
T  28063871 aagt-ttatgctgacagggagtatgatgtatcacaaggactaaagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28063774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 28619620 - 28619539
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatttt 101  Q
    |||||||||||||||||||||||| | ||||  ||| | |||||||| ||||||||||||||||||||| ||||||||||||    
T  28619620 tccctgactcaggattaaatacaaagaggtcattgactctgcacttctattatcactttagtctctgacattaaataatttt 28619539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 5965517 - 5965442
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaat 95  Q
    |||||||||||||||||||||||| |  |||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  5965517 tccctgactcaggattaaatacaaagaagtctttgactctgcacttccgttatcactttagtctctgacgttaaat 5965442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 9625241 - 9625464
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||| ||||||||| |||| || ||   ||||| ||||||||||||||||||||||||| |   ||||||||||| | ||||  ||| |  |||||||    
T  9625241 ctgacttaggattaaacacaaagtagtacttgaatatgcacttccattatcactttagtctttagtgttaaataattatgttaactgattaggtgacaaa 9625340  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcacttt-gttcgttgaaccgaaaatcaatatctccaaac 221  Q
     || |||||||||||| | |||||   | ||  |  || ||||||||||||| ||||| |||||||| |||||| ||| ||||||||||||||  |||||    
T  9625341 tgttttatgctgacaaggagtatggattatcgtaaagattaaagtgaaagtagaaaatggtcactttagttcgt-gaatcgaaaatcaatatcctcaaac 9625439  T
Q  222 tcgttccaacaaagtgttgttcttc 246  Q
    |||| ||||  |||||||| |||||    
T  9625440 tcgtcccaatgaagtgttgctcttc 9625464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 41121276 - 41121353
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||| |||  | |||||||||||||| ||||||||||||||| || ||||||| |||||||||||| |||||    
T  41121276 tatgaggtgtaacaagggctaaagtgaaagtagaaaattgtcactttggtccttgaaccaaaaatcaatatccccaaa 41121353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 41122714 - 41122637
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||| |||||||| |||||||||||||| || ||||| ||||||||| ||  |||||| ||||||||||||||||||    
T  41122714 tatgaagtgtcacattgactaaagtgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaa 41122637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 12637833 - 12637647
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||| |||||||||| ||||||| || ||  |||||||||||||||| |||||||||||||| | ||| |||||||   || | ||  |||||  || |    
T  12637833 tccctaactcaggattgaatacaaagtagttcctgaatgtgcacttccgttatcactttagtccccgacattaaata---ttttcaactgatgatgtggc 12637737  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatca 209  Q
    ||| || |||| || |||| | |||||| ||||||||  |||||||||||||||| || ||  |||||||| ||  ||||| ||||||||    
T  12637736 aaaggttttatactaacaaggagtatgatgtgtcacatggactaaagtgaaagtagaatatgatcactttggtccctgaactgaaaatca 12637647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 28526496 - 28526394
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgtt 242  Q
    |||||||||||| | |||||||||||||| || |||||  ||| |||| |  ||||||||||||||||||||| |||||||||  |||| |||||||| |    
T  28526496 tatgaggtgtcatagtgactaaagtgaaaatagaaaatgatcattttggttcttgaaccgaaaatcaatatct-caaactcgtctcaacgaagtgttgct 28526398  T
Q  243 cttc 246  Q
    ||||    
T  28526397 cttc 28526394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 41754127 - 41754210
Alignment:
Q  131 gctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||| | |||||| |||||| |  |||||||||||||||||||||| ||||||||| ||  |||| ||||||||||||||    
T  41754127 gctgacaaggagtatgacgtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatc 41754210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 35178879 - 35178805
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  35178879 tccctgactcaggattaaatacaaataagtccctgattctgcacttccgttatcactttagtccctgacgttaaa 35178805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 2552186 - 2552254
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||| |   ||||||||||||||||||    
T  2552186 atgaggtgtcacag-gactaaagtgaaagtagaaaattgtcactttggtttctgaaccgaaaatcaatat 2552254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 41754768 - 41754687
Alignment:
Q  133 tgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||| | |||||| ||||||||  || ||||||||||||||||||| ||||||||| ||  |||| ||||||||||||||    
T  41754768 tgacaaggagtatgatgtgtcacagggattaaagtgaaagtaaaaaatggtcactttggtccatgaatcgaaaatcaatatc 41754687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 213
Target Start/End: Original strand, 45476238 - 45476403
Alignment:
Q  48 gtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatga 147  Q
    |||||||| | ||||||||  |||||||||||||||||  ||||||| || | | ||||  |||||  || |  | || |||||||||| | |  || ||    
T  45476238 gtctctgactctgcacttctgttatcactttagtctctcccgttaaaaaaatctgttaagtgatgatgtggcgcatgtgttatgctgacgaggattaaga 45476337  T
Q  148 ggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||  ||| |||||||||||| ||||||||||||||| ||  |||||| |||||||||||    
T  45476338 ggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 45476403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 30134743 - 30134807
Alignment:
Q  149 gtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||  |||||||||||||||| ||||||||||||||| || || |||| |||||||||||    
T  30134743 gtgtcacagagactaaagtgaaagtagaaaattgtcactttggtcctttaaccaaaaatcaatat 30134807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 32898417 - 32898346
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| ||||||||||||    
T  32898417 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatc 32898346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 8569460 - 8569530
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||| |||||||||||| || || | ||||||||||||| | |||||| ||||||| |||||||||||    
T  8569460 tgactcatgattaaatacaaagtagtttatgaatgtgcactttcgttatcagtttagtccctgacgttaaa 8569530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 32898520 - 32898446
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||| ||||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  32898520 tccctgacttaggattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaa 32898446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 33315016 - 33315106
Alignment:
Q  130 tgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||| | |||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  ||||  |||||| |||||| |||||    
T  33315016 tgctgacaaggagtatgaggtgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccgtgaattgaaaattaatatccccaaa 33315106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 35177443 - 35177517
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||||| |||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  35177443 tccctgactccggattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaa 35177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 5737975 - 5737898
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||||||||| |||||||||||| ||||||||| ||  | || | |||||||||||| |||||    
T  5737975 tatgaggtgtcacatggactaaagtaaaagtaaaaaatggtcactttggtctctaaatcaaaaatcaatatccccaaa 5737898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 10406357 - 10406434
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| ||||||| |||| ||||| ||||||||| ||  |||||| ||||||||||| ||||||    
T  10406357 tatgaggtgtcacagggaccaaagtgatagtagaaaatagtcactttggtctctgaaccaaaaatcaatatttccaaa 10406434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 1953003 - 1952968
Alignment:
Q  62 acttccattatcactttagtctctgacgttaaataa 97  Q
    |||||| |||||||||||||||||||||||||||||    
T  1953003 acttccgttatcactttagtctctgacgttaaataa 1952968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 28525018 - 28525069
Alignment:
Q  196 tgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttcttct 247  Q
    ||||| ||||||||||||| |||||||||| ||||| |||||||| ||||||    
T  28525018 tgaactgaaaatcaatatccccaaactcgtcccaacgaagtgttgctcttct 28525069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 1952942 - 1952872
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||| |  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  1952942 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 1952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Original strand, 13144530 - 13144588
Alignment:
Q  162 taaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||| ||||||||||||||| ||  | || ||||||||||||| ||||||    
T  13144530 taaagtgaaagtagaaaattgtcactttgatcccttaatcgaaaatcaatatttccaaa 13144588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 31074255 - 31074305
Alignment:
Q  196 tgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttcttc 246  Q
    ||||||||||||||||||| |||||||||| ||||| || ||||| |||||    
T  31074255 tgaaccgaaaatcaatatccccaaactcgtcccaacgaaatgttgctcttc 31074305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 36032869 - 36032919
Alignment:
Q  135 acaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtca 185  Q
    |||| |||||||||||||||||  ||| |||||||||||| ||||||||||    
T  36032869 acaaggggtatgaggtgtcacagggacgaaagtgaaagtagaaaattgtca 36032919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 2561339 - 2561408
Alignment:
Q  145 tgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||| |||||| |||||||| |||||||| ||||| || | |||| |  ||||||||||||||||||||    
T  2561339 tgaggcgtcacagtgactaaaatgaaagtagaaaatagtgattttggttcttgaaccgaaaatcaatatc 2561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 12637633 - 12637589
Alignment:
Q  202 gaaaatcaatatctccaaactcgttccaacaaagtgttgttcttc 246  Q
    ||||||||||||| | |||||||||||||| |||||||| |||||    
T  12637633 gaaaatcaatatccctaaactcgttccaacgaagtgttgctcttc 12637589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 38853806 - 38853994
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    ||||||||||||||||||||| || ||| || ||||||||||||| |||||| ||||||| |||||||||||||||| | ||||   ||||| |||||||    
T  38853806 ctgactcaggattaaatacaaagtagtccctaaatgtgcacttccgttatcaatttagtcactgacgttaaataattatgttaactcatgacgtgacaaa 38853905  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaat 211  Q
    ||| ||||||| |||| | |||||||||||||||  ||||||| |||||||| | ||| ||| | ||| || |||||||||||||||||    
T  38853906 agttttatgctaacaaggagtatgaggtgtcacagggactaaattgaaagtagataatagtcgccttggtccttgaaccgaaaatcaat 38853994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 12746274 - 12746116
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    |||||||||||||||||||||| || ||  |||||||||| ||||| ||||||||||||||  | | ||||||||||| || |||  ||| |  ||||||    
T  12746274 cctgactcaggattaaatacaaagtagttcctgaatgtgcccttccgttatcactttagtccataatgttaaataattctagtaagtgattatgtgacaa 12746175  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaat 180  Q
    |||| |||||||||||||| |||||||||||||||  |||||||||||||||| |||||    
T  12746174 aagttttatgctgacaaagagtatgaggtgtcacagggactaaagtgaaagtagaaaat 12746116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 37607150 - 37607344
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||| ||||| |||||||||||| || |||  | ||||||||||||| |||||||||||||| ||||||||| |||||| | ||||  |||||| ||||    
T  37607150 tccctaactcatgattaaatacaaggtagtcctttaatgtgcacttccgttatcactttagtccctgacgttatataattatgttaactgatgacgtgac 37607249  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||| || ||||||| ||||   ||||||| |||||||  |||||||||||| ||| ||||| ||||||||| ||  |||||| ||||||||||||    
T  37607250 aaaggttttatgctaacaagaagtatgagatgtcacaaggactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatc 37607344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 14887573 - 14887346
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||||||||||||||| | || ||   | ||||||||||| ||||||  |||||||| |||||  |||||||||||||| ||||  |||||  ||||    
T  14887573 tccctgactcaggattaaacataaagtataccctgaatgtgcaattccatcgtcactttaatctctagcgttaaataattttgttaactgatgatgtgac 14887474  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaa 219  Q
    ||| || ||||||| |||| | |||||||||||||||  |||||||||||||||| ||||| |||| | || ||  ||||   ||||||||||||  |||    
T  14887473 aaatgttttatgctaacaaggagtatgaggtgtcacagggactaaagtgaaagtagaaaatggtcaatatggtccctgaattaaaaatcaatatcctcaa 14887374  T
Q  220 actcgttccaacaaagtgttgttcttct 247  Q
    |||||| ||||| |||||||| ||||||    
T  14887373 actcgtcccaacgaagtgttgctcttct 14887346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 26586367 - 26586176
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| ||||||||| || || |||| ||||||||||||||| |||||||||||||||||| |||||||||||| | |||    ||||| ||| |||    
T  26586367 ctgactcaagattaaatataaagtagtctttgaatgtgcacttccgttatcactttagtctctggcgttaaataattatgttagtttatgacatgataaa 26586268  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     |  || ||||||||||| |||||||||| |  |  |||||||||||||||| ||||||||||||| | ||  |||||||||||| ||||||    
T  26586267 ggatttgtgctgacaaagagtatgaggtgccgtagagactaaagtgaaagtagaaaattgtcacttcgatctctgaaccgaaaattaatatc 26586176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 34582741 - 34582585
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||| ||||||||||||| || ||| |||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||  ||| |  || ||||     
T  34582741 tgactcgggattaaatacaaagtagtccctgaatgtgcacttccgttatcactttagtccctgacgttaaataattatatcaactgatcatgtggcaaag 34582642  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaat 180  Q
    || ||||||||||||  ||||||||||||||||   |||||||| |||||| |||||    
T  34582641 gttttatgctgacaagaggtatgaggtgtcacatgaactaaagtaaaagtagaaaat 34582585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 17466900 - 17466733
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    ||||||||||||||||||||| |  |||||||| | ||||||||| |||||||||||||||  |||||||||||||| | ||||  |||||  ||||| |    
T  17466900 ctgactcaggattaaatacaaagaagtctctgactctgcacttccgttatcactttagtctaagacgttaaataattctgttaagtgatgatgtgacaca 17466801  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
     || ||| | |||||| |  |||||||||||||||  ||||||||||||||||||||| |||| ||||    
T  17466800 tgttttaggatgacaaggcatatgaggtgtcacacgcactaaagtgaaagtaaaaaatggtcaatttg 17466733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 18675168 - 18675325
Alignment:
Q  56 atgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcac 155  Q
    |||||||||||||||||||||||||||| || ||| |||||||||| ||||  ||| |  ||||||| || ||||||||| |||  ||||||||||||||    
T  18675168 atgtgcacttccattatcactttagtctttggcgtcaaataattttgttaactgataatgtgacaaatgttttatgctgataaaaagtatgaggtgtcac 18675267  T
Q  156 actgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |  ||||||||| |||||| ||||||||||||||| || ||||| | ||||| ||||||    
T  18675268 a-ggactaaagtcaaagtagaaaattgtcactttgatccttgaatcaaaaattaatatc 18675325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 38854841 - 38855028
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    |||||||||||||||||||| || ||  || |||||||||||   |||||| ||||||| |||| ||||||||||| | ||||   ||||| ||||||||    
T  38854841 tgactcaggattaaatacaaagtagttcctaaatgtgcacttatgttatcaatttagtcactgaagttaaataattatgttaactcatgacgtgacaaaa 38854940  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaat 211  Q
       ||||||| |||| | |||||||||||||||  | ||||| |||||||| | ||| ||||| ||| || |||||||||||||||||    
T  38854941 aatttatgctaacaaggagtatgaggtgtcacaggggctaaattgaaagtagataatagtcaccttggtccttgaaccgaaaatcaat 38855028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 21733818 - 21733653
Alignment:
Q  48 gtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatga 147  Q
    |||||||| | ||||||||| | |||||||||||   ||  |||||| |||| | ||||  |||||  ||||| | || |||||||||||| | ||||||    
T  21733818 gtctctgactctgcacttccgtcatcactttagttgttgcagttaaaaaattctgttaagtgatgatgtgacacatgttttatgctgacaaggagtatga 21733719  T
Q  148 ggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
     |||||||  ||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||    
T  21733718 agtgtcacgatgactaaagtgaaagtaaaaaatggtcactttggtctctgaaccgaaaatcaatat 21733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 14886612 - 14886724
Alignment:
Q  127 ttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgtt 226  Q
    |||||||||||||| |||||||| |||| |  ||||||| |||||||| ||||||||| ||||| || |||||| ||||||||||||| ||||||| |||    
T  14886612 ttatgctgacaaagagtatgaggcgtcatagggactaaaatgaaagtacaaaattgtcgctttggtccttgaacagaaaatcaatatccccaaacttgtt 14886711  T
Q  227 ccaacaaagtgtt 239  Q
     |||| |||||||    
T  14886712 tcaacgaagtgtt 14886724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 15442044 - 15441920
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    |||||||||||||||||||||| || |||  |||||||||||||  ||||||||||||||||||   ||||||||||||| ||||  |||||  || |||    
T  15442044 cctgactcaggattaaatacaaagtagtccttgaatgtgcacttttattatcactttagtctctagtgttaaataattttgttaactgatgatgtggcaa 15441945  T
Q  122 aagtcttatgctgacaaagggtatg 146  Q
    | || |||||||||||||| |||||    
T  15441944 atgttttatgctgacaaagagtatg 15441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 34037742 - 34037554
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagt 125  Q
    ||||||||||||||||||    |||| ||| | ||||||||  |||||||||||||  | | ||||||| |||| | ||||  |||||  ||||| | ||    
T  34037742 actcaggattaaatacaaataagtctatgactctgcacttctgttatcactttagttcccgccgttaaaaaattatgttaagtgatgatgtgacacatgt 34037643  T
Q  126 cttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     |||||||||||| | |||||||||||||||| ||||||||||| |||| ||||| ||||||||| |   |||||| ||||||||||||    
T  34037642 tttatgctgacaaggagtatgaggtgtcacacagactaaagtgacagtagaaaatagtcactttgattcctgaaccaaaaatcaatatc 34037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 31443196 - 31443120
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||| |   |||||||||||||||||||||||||    
T  31443196 atgaggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaa 31443120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 245
Target Start/End: Original strand, 26585162 - 26585348
Alignment:
Q  56 atgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcac 155  Q
    |||| ||||||  |||||||||||||||||  |||||||||||| | ||||  |||||  ||||| |  | ||||| |||||| | ||||||||||||||    
T  26585162 atgtacacttctgttatcactttagtctctagcgttaaataattatgttaattgatgatgtgacata--ttttatgttgacaaggagtatgaggtgtcac 26585259  T
Q  156 actgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttctt 245  Q
    |  ||||||||||||| | | |||| ||||||||| ||  |||||||||||| ||||||   |||||| ||||||| |||||||| ||||    
T  26585260 agggactaaagtgaaaat-agaaatggtcactttggtccctgaaccgaaaataaatatccttaaactcattccaacgaagtgttgctctt 26585348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 7412143 - 7412334
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| ||||||||| || |  ||| ||||  |||||||||| |||||||||||||| || || |||||||||| | ||||  |||||| ||||| |    
T  7412143 ctgactcaagattaaatataaagaagtcactgatagtgcacttccgttatcactttagtccctaacattaaataattatgttaagtgatgacatgacaca 7412242  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     || ||| | |||||  |  ||||| ||||||||  ||||||||||||| || ||||| ||||||||||||  | |||| |||| |||||||    
T  7412243 tgttttacgatgacatggcatatgatgtgtcacaaggactaaagtgaaaatagaaaatggtcactttgttccctcaaccaaaaaacaatatc 7412334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 17330191 - 17330120
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||| ||  |||||| ||||||||||||    
T  17330191 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatc 17330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 31091602 - 31091528
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||||| ||||||||||||||||||||||||||    
T  31091602 tccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcactttagtctctgacgttaaa 31091528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 31091499 - 31091429
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| || ||||||| |||||||||||    
T  31091499 tatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatat 31091429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 39016355 - 39016285
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||||||||||||| ||  |||||| |||||||||||    
T  39016355 tatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatat 39016285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 14704156 - 14704233
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  14704156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaa 14704233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 43380738 - 43380815
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||   ||||||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  43380738 tatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaa 43380815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 2910147 - 2910222
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| |||||||||||||    |||||||| | ||||||||| || ||||||||||| |||||||||||    
T  2910147 atccctgactcgggattaaatacaaataagtctctgactctgcacttcctttgtcactttagtccctgacgttaaa 2910222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 11985742 - 11985813
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||| || ||||||||| ||||| || | |||||| ||||||| || ||||||||    
T  11985742 ctgactcaggattaaatacaaagtagtctctgaaggtgcattttcgttatcagtttagtccctaacgttaaa 11985813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 32766314 - 32766240
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||||| ||||||||||||||  ||||||||||    
T  32766314 tccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcactttagtccttgacgttaaa 32766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 39015156 - 39015226
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| |||| |||| || ||||||| |||||||||||    
T  39015156 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatat 39015226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 5914978 - 5914913
Alignment:
Q  149 gtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||  ||||||| |||||||||||||||||||||||  ||  |||||| ||||||||||||    
T  5914978 gtgtcacagagactaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatc 5914913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 17330305 - 17330232
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaa 93  Q
    ||||||||||||||||||||||||    |||||||| | |||| |||| ||||||||||||||  |||||||||    
T  17330305 tccctgactcaggattaaatacaaataagtctctgactctgcatttccgttatcactttagtccatgacgttaa 17330232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 18676848 - 18676679
Alignment:
Q  70 tatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtga 169  Q
    ||||||| ||||||||| |||||||||||  | ||||  |||||| ||  ||   | |||||| ||||| | ||||||  ||||| |  |||||||| ||    
T  18676848 tatcactctagtctctggcgttaaataatgatgttaactgatgacgtggtaatgattttatgccgacaaggagtatgaaatgtcaaagagactaaagcga 18676749  T
Q  170 aagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgtt 239  Q
    ||||| ||||| ||||||||| ||  |||||  |||||||||||||||||| ||||  |||| |||||||    
T  18676748 aagtagaaaatggtcactttggtccctgaacaaaaaatcaatatctccaaagtcgtctcaacgaagtgtt 18676679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 32765088 - 32765165
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||| |  |||||||||||||||| ||||| ||| ||||| ||  |||||| |||||||||||| |||||    
T  32765088 tatgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaa 32765165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 31442489 - 31442573
Alignment:
Q  130 tgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||| | ||||||||||| |  ||||||||||||||| ||||||   ||| ||| ||  |||||||||||||||||||    
T  31442489 tgctgacaaagtgcatgaggtgtcataaggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatc 31442573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 17466093 - 17466168
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||||||||||||||| |   ||||||| | ||||||||| || ||||||||||| ||||||| ||| ||||    
T  17466093 tgactcaggattaaatacaaagatatctctgactctgcacttccgttttcactttagtccctgacgtgaaacaatt 17466168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 32764989 - 32765060
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||||||||||||||||    ||| |||| | ||||||||| ||||||||||| || |||||||||||    
T  32764989 ctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcactttaatccctgacgttaaa 32765060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 39016419 - 39016384
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39016419 tgcacttccgttatcactttagtctctgacgttaaa 39016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 7073698 - 7073760
Alignment:
Q  31 ggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaa 93  Q
    |||||||||||||    |||||||| | ||||||||| |||||||||||||| ||||||||||    
T  7073698 ggattaaatacaaataagtctctgattctgcacttccgttatcactttagtccctgacgttaa 7073760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 8420061 - 8420123
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtc 82  Q
    ||||||| ||| |||||||||||| || ||| |||||||||||||||  |||||| |||||||    
T  8420061 tccctgagtcaagattaaatacaaagtagtccctgaatgtgcacttctgttatcagtttagtc 8420123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 24459426 - 24459356
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||| |  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  24459426 tatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatat 24459356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 24459521 - 24459447
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||| ||||||||||||||||    ||||||||   |||||||| ||||||||||||||| ||||| |||||    
T  24459521 tccctgaatcaggattaaatacaaataagtctctgaccctgcacttctattatcactttagtccctgacattaaa 24459447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 26586173 - 26586123
Alignment:
Q  196 tgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttcttc 246  Q
    |||||| |||||||||||| |||||||| | |||||||||||||| |||||    
T  26586173 tgaaccaaaaatcaatatccccaaactcatcccaacaaagtgttgctcttc 26586123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 38854017 - 38854051
Alignment:
Q  196 tgaaccgaaaatcaatatctccaaactcgttccaa 230  Q
    |||||||||||||||||||||||||||||| ||||    
T  38854017 tgaaccgaaaatcaatatctccaaactcgtcccaa 38854051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 40000307 - 40000237
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||| |  ||| |||||||||||| |||||  |||||||| || ||||||| |||||||||||    
T  40000307 tatgaggtgtcagagggaccaaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatat 40000237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 2911439 - 2911382
Alignment:
Q  163 aaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||| ||||||||||||||| ||  | |||| ||||||||||| ||||||    
T  2911439 aaagtgaaagtagaaaattgtcactttggtctcttaaccaaaaatcaatatttccaaa 2911382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 9616097 - 9616036
Alignment:
Q  33 attaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| || ||| ||||||| |||||| | |||||| ||||||||| |||||||||    
T  9616097 attaaatacaaagtagtccctgaatgcgcactttcgttatcaatttagtctccgacgttaaa 9616036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 21732282 - 21732343
Alignment:
Q  159 gactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||||||| ||||| ||||||||| ||  |||||| ||||| |||||| |||||    
T  21732282 gactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaa 21732343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 28864839 - 28864778
Alignment:
Q  33 attaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| || |||||||||| |||||||   |||||| |||||||||||| ||||||    
T  28864839 attaaatacaaagtagtctctgaatatgcacttttgttatcattttagtctctgatgttaaa 28864778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 8420992 - 8420956
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtg 60  Q
    |||||||||||||||||||| || |||||||||||||    
T  8420992 tgactcaggattaaatacaaagtagtctctgaatgtg 8420956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 33161857 - 33161901
Alignment:
Q  62 acttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||| ||||||||||||||  ||||||||||||||||| ||||    
T  33161857 acttccgttatcactttagtccttgacgttaaataattttgttaa 33161901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 246
Target Start/End: Complemental strand, 25621788 - 25621567
Alignment:
Q  28 tcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtct 127  Q
    ||||||||||||||||  | || | ||||||||||||||  |||||||||||||| |||||||||||||||||| ||||  |||||  || ||||  | |    
T  25621788 tcaggattaaatacaaattagtttttgaatgtgcacttctgttatcactttagtcactgacgttaaataattttgttaactgatgatttggcaaagattt 25621689  T
Q  128 tatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgt---tgaaccgaaaatcaatatctccaaactcg 224  Q
    |||||| |||| |||||||| |||| |||  |||||||||||||||| ||||| |||||||  || ||   ||||||||||| |||||||  ||||||||    
T  25621688 tatgctcacaaggggtatgaagtgtaacaaggactaaagtgaaagtagaaaatggtcacttaattagttcctgaaccgaaaaccaatatcctcaaactcg 25621589  T
Q  225 ttccaacaaagtgttgttcttc 246  Q
    |  |||| |||||||| |||||    
T  25621588 tctcaacgaagtgttgctcttc 25621567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 24288935 - 24288747
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagt 125  Q
    |||||||||||| ||||| || |||  ||||||||||||||||||||||||||| |||||| ||||| |||||| | ||||  |||||  ||||||| ||    
T  24288935 actcaggattaattacaaagtagtccttgaatgtgcacttccattatcactttattctctggcgttatataattctgttaactgatgatgtgacaaaggt 24288836  T
Q  126 cttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     |||||||||||| | |||||| |||| |||  ||||||| | |||||| ||||| || | |||| || ||||||||||||| ||||||    
T  24288835 tttatgctgacaaggagtatgatgtgtgacatggactaaaataaaagtagaaaatggtaattttgatccttgaaccgaaaataaatatc 24288747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 12223774 - 12223574
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||||||||||||||||| || |  ||| |||| | |||| |||| |||| ||||||||| |||| ||||||||||| | ||||  |||||  ||||    
T  12223774 tccctgactcaggattaaatataaagaagtccctgactctgcagttccgttattactttagtcactgatgttaaataattctgttaagtgatgatgtgac 12223675  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaa 219  Q
    | | || ||| | |||||     |||||| |||||||   ||||||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||    
T  12223674 acaggttttacgatgacatgacatatgagttgtcacaggaactaaagtgaaagtaaaaaattgtcactttgatccttgaaccaaaaatcaatatccccaa 12223575  T
Q  220 a 220  Q
    |    
T  12223574 a 12223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 27067841 - 27067996
Alignment:
Q  31 ggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttat 130  Q
    ||||||||  ||| || ||| |||||||||||||| |||||||||||||||||||||| |||||||||| |  |||  | |||  ||||||| |  ||||    
T  27067841 ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataattatgctaacgggtgatgtgacaaatggtttat 27067940  T
Q  131 gctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcac 186  Q
    |||||||||| |||||  ||||||||  |||||||||||||||| ||||| |||||    
T  27067941 gctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatggtcac 27067996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 27210472 - 27210317
Alignment:
Q  31 ggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttat 130  Q
    ||||||||  ||| || ||| |||||||||||||| |||||||||||||||||||||| |||||||||| |  |||  | |||  ||||||| |  ||||    
T  27210472 ggattaaaagcaaagtagtccctgaatgtgcactttcattatcactttagtctctgacattaaataattatgctaacgggtgatgtgacaaatggtttat 27210373  T
Q  131 gctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcac 186  Q
    |||||||||| |||||  ||||||||  |||||||||||||||| ||||| |||||    
T  27210372 gctgacaaagagtatggtgtgtcacagagactaaagtgaaagtagaaaatggtcac 27210317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 8879616 - 8879464
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaa 121  Q
    |||||||||||||||||||||| || ||  ||||||||||| |||  |||||||||||||| |||||||||||||||||| ||||   ||||  || |||    
T  8879616 cctgactcaggattaaatacaaagtagttcctgaatgtgcatttctgttatcactttagtccctgacgttaaataattttgttaactaatgagatggcaa 8879517  T
Q  122 aagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagta 174  Q
    | || ||||| |||||| |  |||||||||||| |  || |||||||||||||    
T  8879516 aggttttatgatgacaaggaatatgaggtgtcatatagagtaaagtgaaagta 8879464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 216
Target Start/End: Original strand, 30917792 - 30917956
Alignment:
Q  51 tctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggt 150  Q
    ||||||||||||||||||||||||||||| ||   |||||||||||||| |  |||  |||||  || ||||  | ||||| |||||||| |||||||||    
T  30917792 tctgaatgtgcacttccattatcactttaatcctcgacgttaaataattatgctaactgatgatgtg-caaagattttatgttgacaaagagtatgaggt 30917890  T
Q  151 gtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctc 216  Q
    ||||||  |||||||||||||| | ||||||||||| ||  ||   ||||||||||| ||||||||    
T  30917891 gtcacaaggactaaagtgaaagaagaaaattgtcacgtttgtcccagaaccgaaaattaatatctc 30917956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 8048856 - 8048665
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| |||||||||||| |  ||||| || | ||||||||| ||||||||||| ||| | ||||||||||||| ||||||  |||||  || || |    
T  8048856 ctgactcaagattaaatacaaagaagtctccgactctgcacttccgttatcactttaatctttaacgttaaataattctattaagtgatgatgtgtcaca 8048757  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
     ||  || | ||||| |   ||||| ||||||||  |||||||||||||||| ||||| ||||||||| ||  |||||||||||| ||||||    
T  8048756 tgttatacgatgacataacatatgatgtgtcacatggactaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaattaatatc 8048665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 384991 - 385061
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||||| ||  |||| ||||||||||||||    
T  384991 atgaggtgtcacgttgactaaagtgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaatatc 385061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 24844627 - 24844695
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||||||||||||| || |||  |||||||||||||||||||||| |||||||||  ||||||||    
T  24844627 actcaggattaaatacaaagtagtcattgaatgtgcacttccattatcagtttagtctcaaacgttaaa 24844695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 33060891 - 33060951
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatga 113  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||| |||||    
T  33060891 tgaatgtacacttccgttatcactttagtctctgacgttaaataattctgttaaatgatga 33060951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 43461689 - 43461618
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||||| ||  |||||| ||||||||||||    
T  43461689 tatgaggtgtcacatgaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaaaaatcaatatc 43461618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 22621187 - 22621345
Alignment:
Q  32 gattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatg 131  Q
    ||||||||| || || ||| |||||||||||||||  |||||| | |||||| || ||||||| | || | ||||  |||||  ||||||| || || ||    
T  22621187 gattaaatataaagtagtccctgaatgtgcacttctgttatcagtctagtctatgtcgttaaaaacttctgttaactgatgagttgacaaatgttttttg 22621286  T
Q  132 ctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    ||||||| | | |||| ||||||||  |||||||||||||||| |||||  ||||||||    
T  22621287 ctgacaaggcgcatgatgtgtcacaaggactaaagtgaaagtagaaaatgatcactttg 22621345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 30925079 - 30925009
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||    |||||||| | ||||||||| |||| |||||||||||||||||||||    
T  30925079 tgactcaggattaaatacaaataagtctctgactatgcacttccgttattactttagtctctgacgttaaa 30925009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 214
Target Start/End: Original strand, 24287561 - 24287722
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgt 152  Q
    |||||||||||||   ||||||||||||||  ||||||||||||||| | ||||  ||| |   | |||||   |||||| ||||| | |||||||||||    
T  24287561 tgaatgtgcacttaagttatcactttagtccttgacgttaaataattatgttaattgataatgaggcaaaaaaattatgccgacaaggagtatgaggtgt 24287660  T
Q  153 cacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||  |||||||||||||||| ||||| ||| ||||  ||  |||||| ||||| ||||||    
T  24287661 cacagggactaaagtgaaagtagaaaatggtcgctttagtccctgaaccaaaaatgaatatc 24287722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 30924981 - 30924904
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||||| |||  |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  30924981 tatgaggtgtcacagtgatcaaagtgaaagtagaaaatggtcactttgatctatgaaccaaaaatcaatatccccaaa 30924904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 33607466 - 33607389
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||| |  |||||||||||||||||||| | ||||||||| || ||| ||| |||||||||||| |||||    
T  33607466 tatgaggtgtcaaatggactaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaa 33607389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 213
Target Start/End: Original strand, 46286551 - 46286744
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgac 119  Q
    ||||||||||||||||||||||||    |||||||| | ||||||||  ||||||||||| |||||  ||||||| || | | ||||  |||||  || |    
T  46286551 tccctgactcaggattaaatacaaataagtctctgactctgcacttctgttatcactttaatctctaccgttaaaaaaatatgttaagtgatgatatggc 46286650  T
Q  120 aaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
      |  |||||| || ||||   |||||| |||| ||| |||| ||| |||||||| ||||| ||||||||| || ||||||| |||||||||||    
T  46286651 gcatatcttatactcacaagaagtatgatgtgttacattgaccaaaatgaaagtagaaaatagtcactttgatccttgaaccaaaaatcaatat 46286744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 33607695 - 33607619
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||| |||||||||||||||| |  |||||||| | ||||||||| |||||| ||||| | ||||||||||||||||    
T  33607695 ctgattcaggattaaatacaaagaagtctctgattctgcacttccgttatcattttagaccctgacgttaaataatt 33607619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 10899149 - 10899074
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||| |||| |||||||||||||||    |||||||| | ||||||||| |||||||||||||| |||||||||||    
T  10899149 atccttgacccaggattaaatacaaataagtctctgactctgcacttccgttatcactttagtccctgacgttaaa 10899074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 43457619 - 43457666
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||    
T  43457619 tatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttg 43457666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 7258323 - 7258397
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||| ||||||||||||||||||    |||||||| | ||||||||  |||||||||||||| |||||||||||    
T  7258323 tccctaactcaggattaaatacaaataagtctctgactctgcacttctgttatcactttagtccctgacgttaaa 7258397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 7258426 - 7258496
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  7258426 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 7258496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 8374965 - 8375039
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataa 97  Q
    ||||||||| |||||||||||    || ||||| | ||||||||| ||||||||||||||| |||||||||||||    
T  8374965 ctgactcagaattaaatacaaaaaagtttctgattttgcacttccgttatcactttagtctttgacgttaaataa 8375039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 8375658 - 8375572
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    ||||||||||| |||||||||||| |  || ||||| | ||||||||| |||||| |||||||   |||||||||||||||| ||||    
T  8375658 tccctgactcatgattaaatacaaagaagtttctgactctgcacttccgttatcaatttagtccgcgacgttaaataattttgttaa 8375572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 10899045 - 10898975
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||| ||||||| ||||| ||||||||| || ||||||| |||||||||||    
T  10899045 tatgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 10898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 34707698 - 34707736
Alignment:
Q  69 ttatcactttagtctctgacgttaaataattttattaaa 107  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  34707698 ttatcactttagtctctgacgttaaataattttgttaaa 34707736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 48646097 - 48646171
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | | ||||||| |||||||||||||||||| |||||||    
T  48646097 tccctgactcaggattaaatacaaataagtccctgactctacacttccgttatcactttagtctctgtcgttaaa 48646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 48788644 - 48788574
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  48788644 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 48788719 - 48788673
Alignment:
Q  48 gtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||    
T  48788719 gtctctgactctgcacttccgttatcactttagtctctgacgttaaa 48788673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 44334422 - 44334345
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||| |||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  44334422 tatgagatgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaa 44334345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 8870246 - 8870290
Alignment:
Q  202 gaaaatcaatatctccaaactcgttccaacaaagtgttgttcttc 246  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||    
T  8870246 gaaaatcaatatcctcaaactcgtcccaacaaagtgttgttcttc 8870290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 9365243 - 9365199
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactt 188  Q
    |||||||||||||| || ||||||||||||| |||||||||||||    
T  9365243 atgaggtgtcacacagattaaagtgaaagtagaaaattgtcactt 9365199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 12220073 - 12220156
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    ||||||||| ||||||||| || |  |||||||| | ||||||||   |||||||||||||| ||||||||||||||||| ||||    
T  12220073 cctgactcaagattaaatagaaagaagtctctgactctgcacttctgatatcactttagtct-tgacgttaaataattttgttaa 12220156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 13578392 - 13578317
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||||| |||||||||||    ||| |||| | ||||||||| |||||||||||||| ||||||||||||||||    
T  13578392 ctgactcagaattaaatacaaataagtcactgactctgcacttccgttatcactttagtc-ctgacgttaaataatt 13578317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 44529075 - 44529162
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||||||| ||||||||||||    ||||| || |   ||||||  |||||||||||||| |||||||||||||||||| ||||    
T  44529075 atccctgactcatgattaaatacaaataagtctccgactcaacacttctgttatcactttagtccctgacgttaaataattttgttaa 44529162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 8870883 - 8870845
Alignment:
Q  202 gaaaatcaatatctccaaactcgttccaacaaagtgttg 240  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  8870883 gaaaatcaatatccccaaactcgtcccaacaaagtgttg 8870845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 35727747 - 35727820
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||| ||    |||||||| | ||||| ||| |||||||||||||| |||||||||||    
T  35727747 tccctgactcaggattaaatataaataagtctctgactctgcacatccgttatcactttagtc-ctgacgttaaa 35727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 35727849 - 35727919
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| ||||||| |||| ||||| ||||||||| || || |||| |||||||||||    
T  35727849 tatgaggtgtcacagggaccaaagtgatagtagaaaatggtcactttgatcctttaaccaaaaatcaatat 35727919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 43461764 - 43461730
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaa 93  Q
    ||||||||| |||||||||||||||||||||||||    
T  43461764 tgcacttccgttatcactttagtctctgacgttaa 43461730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 44333288 - 44333358
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| || ||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  44333288 tatgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 44333358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 44334524 - 44334450
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| ||||||||| ||    ||| |||| | |||||||||||||||||||||||| ||||| |||||    
T  44334524 tccctgactcatgattaaatataaataagtccctgactctgcacttccattatcactttagtccctgacattaaa 44334450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 48646204 - 48646269
Alignment:
Q  147 aggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||  ||| |||||||||||||||||| ||||||||| || ||||||| ||||| |||||    
T  48646204 aggtgtcacagagaccaaagtgaaagtaaaaaatggtcactttg-tccttgaaccaaaaattaatat 48646269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 48647415 - 48647345
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||  ||  |||||| |||||||||||    
T  48647415 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatat 48647345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 48647518 - 48647444
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    |||||| | | |||||||   |||||||||||||| |||||||||||    
T  48647518 tccctgactcaggattaaatacaaataagtctctcactctgcacttttgttatcactttagtccctgacgttaaa 48647444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 24934965 - 24935018
Alignment:
Q  160 actaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||| ||||| ||||||||| ||  | ||||||||||||||||    
T  24934965 actaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatat 24935018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 34710349 - 34710308
Alignment:
Q  149 gtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    ||||||||  ||||||||||||||||||||||||| ||||||    
T  34710349 gtgtcacagagactaaagtgaaagtaaaaaattgttactttg 34710308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 2677094 - 2677158
Alignment:
Q  150 tgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||  |||||||||||||||| |||||  |||||||||||  |||||  ||||||||||||    
T  2677094 tgtcacatggactaaagtgaaagtagaaaatgatcactttgttccctgaactaaaaatcaatatc 2677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 6680569 - 6680529
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  6680569 tgcacttctattatcactttagtctttgatgttaaataatt 6680529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 24935657 - 24935617
Alignment:
Q  150 tgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  24935657 tgtcacaaggactaaagtgaaagtaaaaaaatgtcactttg 24935617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 34888959 - 34888847
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacact 158  Q
    ||||||||| ||||||||||||||  ||||||| ||||||| | ||||  |||||| ||||| | || ||| | ||| | ||  ||||||||||||||      
T  34888959 tgcacttccgttatcactttagtccttgacgtttaataattatgttaagtgatgacgtgacataggttttacgatgatatagcatatgaggtgtcacatg 34888860  T
Q  159 gactaaagtgaaa 171  Q
    ||||| |||||||    
T  34888859 gactacagtgaaa 34888847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 32555568 - 32555430
Alignment:
Q  73 cactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaag 172  Q
    |||||||||| | |||||||||||||| | ||||  |||||  ||||||| || |||||||||||| | |||||||||||||||  ||||||||||||||    
T  32555568 cactttagtccccgacgttaaataattatgttaattgatgatatgacaaaggttttatgctgacaaggagtatgaggtgtcacatggactaaagtgaaag 32555469  T
Q  173 taaaaaattgtcactttgttcgttgaaccgaaaatcaata 212  Q
    || ||||||||||||| ||||  |||||||||||||||||    
T  32555468 tagaaaattgtcacttggttc-ctgaaccgaaaatcaata 32555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 9538124 - 9538045
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||||||||||||||||||| |  |||||||| ||||||||||| |||||| |||||||||||| |||||||||||    
T  9538124 tccctgactcaggattaaatacaaagaagtctctgattgtgcacttccgttatcattttagtctctgatgttaaataatt 9538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 16611779 - 16611855
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||||||||||||||||| |  | |||||| | ||||||||| |||||||||||||||||||||||||||||||    
T  16611779 ctgactcaggattaaatacaaagaagcctctgattatgcacttccgttatcactttagtctctgacgttaaataatt 16611855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 220
Target Start/End: Original strand, 9537107 - 9537270
Alignment:
Q  57 tgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcaca 156  Q
    |||||||||||||||||||||||||| |||||||||||||||| |  |||  |||||  || || | || ||| |  |||||    ||||| ||||||||    
T  9537107 tgtgcacttccattatcactttagtcactgacgttaaataattatggtaagtgatgatgtggcacatgttttacgacgacaagtcatatgatgtgtcaca 9537206  T
Q  157 ctgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
     ||||||||||||||||| ||||| ||||||||| ||  |||| | |||||||||||| |||||    
T  9537207 gtgactaaagtgaaagtagaaaatagtcactttgatccctgaatcaaaaatcaatatccccaaa 9537270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 189
Target Start/End: Complemental strand, 35538341 - 35538207
Alignment:
Q  55 aatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtca 154  Q
    ||||||||||||| ||||||||||| ||  | | ||||||||||| | ||||  |||||   ||||||  | ||||||| | |||| |||||||||||||    
T  35538341 aatgtgcacttccgttatcactttaatccttaatgttaaataattctgttaactgatgatgcgacaaacattttatgctaagaaagagtatgaggtgtca 35538242  T
Q  155 cactgactaaagtgaaagtaaaaaattgtcacttt 189  Q
    ||  |||||||||||||||| |||||| |||||||    
T  35538241 caaagactaaagtgaaagtagaaaattatcacttt 35538207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 546008 - 545938
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| || ||||||| |||||||||||    
T  546008 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatat 545938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 18004696 - 18004762
Alignment:
Q  30 aggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaata 96  Q
    |||||||||||||| | ||||| ||| | ||||||||| ||||||||||||||||||| ||||||||    
T  18004696 aggattaaatacaaagaggtctatgactctgcacttccgttatcactttagtctctgatgttaaata 18004762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 137
Target Start/End: Complemental strand, 30970657 - 30970543
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    |||||||| |||||||||||| ||  ||  |||||||||| |||  |||||||||||||| || || |||||||||| | ||||  |||||| |||||||    
T  30970657 ctgactcaagattaaatacaaagtaatcattgaatgtgcatttctgttatcactttagtccctaacattaaataattctgttaaccgatgacgtgacaaa 30970558  T
Q  123 agtcttatgctgaca 137  Q
     || |||||||||||    
T  30970557 tgttttatgctgaca 30970543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 2464820 - 2464897
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  2464820 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaa 2464897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13651106 - 13651042
Alignment:
Q  150 tgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||  |||||||||||||||||||||| ||||||||  ||  |||||||||||||||||||    
T  13651106 tgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccctgaaccgaaaatcaatatc 13651042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 31946989 - 31946934
Alignment:
Q  159 gactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||||||||||||||||| ||||||||| ||  |||| ||||||||||||||    
T  31946989 gactaaagtgaaagtaaaaaatggtcactttggtccctgaatcgaaaatcaatatc 31946934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 4592909 - 4592983
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| ||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  4592909 tccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaa 4592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 8074499 - 8074573
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||||| |||||||||||||  |||||||||||    
T  8074499 tccctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcactttagttcctgacgttaaa 8074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 25590479 - 25590564
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||||| |||||||||||||    |||||||| | ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  25590479 tccctgactc-ggattaaatacaaataagtctctgattctgcacttctgttatcactttaatctctgacgttaaaaaattttgttaa 25590564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 25590581 - 25590651
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  25590581 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatat 25590651  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 32640443 - 32640509
Alignment:
Q  147 aggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||  ||| |||||||||||| ||||| ||||||||| || ||||||| |||||||||||    
T  32640443 aggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatat 32640509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 19183111 - 19183183
Alignment:
Q  142 gtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||| |||||| |  |||||||||||||||||||||| || |||||| ||  |||| ||||||||||||||    
T  19183111 gtatgacgtgtcatatggactaaagtgaaagtaaaaaatggtgactttgctctctgaatcgaaaatcaatatc 19183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 19186193 - 19186134
Alignment:
Q  131 gctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    |||||||| | |||||| ||||||||  ||| |||||||||||||||||| |||||||||    
T  19186193 gctgacaaggagtatgacgtgtcacagggacaaaagtgaaagtaaaaaatagtcactttg 19186134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 578723 - 578653
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    ||||||||| |||  ||||||| |||||||||| |||  |||||||| ||  |||||||||||||||||||    
T  578723 atgaggtgtgacatggactaaaatgaaagtaaagaatgatcactttggtccctgaaccgaaaatcaatatc 578653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 8074601 - 8074671
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||   || |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  8074601 tatgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 8074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 14891194 - 14891148
Alignment:
Q  48 gtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||| | | ||||||| ||||||||||||||||||||||||||    
T  14891194 gtctctgactctacacttccgttatcactttagtctctgacgttaaa 14891148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 40611411 - 40611481
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||| | ||  |||||| |||||||||||    
T  40611411 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatat 40611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 40612631 - 40612561
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| || |||||| ||  |||||| |||||||||||    
T  40612631 tatgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatat 40612561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 37072730 - 37072799
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||||  ||| ||| |||||||| ||||| ||||||||  ||  ||||||||||||||||||    
T  37072730 atgaggtgtcacatggaccaaaatgaaagtagaaaatagtcactttagtccctgaaccgaaaatcaatat 37072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 19271734 - 19271674
Alignment:
Q  159 gactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaa 219  Q
    |||||||||||||||| |||||  ||| |||| ||  | ||||||||||||||||||||||    
T  19271734 gactaaagtgaaagtagaaaatgatcattttgatccctaaaccgaaaatcaatatctccaa 19271674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 220
Target Start/End: Original strand, 34173404 - 34173508
Alignment:
Q  116 tgacaaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatct 215  Q
    ||||||| || || ||||||||| | | || |||| |||||  ||||||| |||||||| |||||  |||||||| ||  |||||| ||||||||||||     
T  34173404 tgacaaatgttttgtgctgacaaggtgcataaggtatcacagggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatcc 34173503  T
Q  216 ccaaa 220  Q
    |||||    
T  34173504 ccaaa 34173508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 40611350 - 40611382
Alignment:
Q  62 acttccattatcactttagtctctgacgttaaa 94  Q
    |||||| ||||||||||||||||||||||||||    
T  40611350 acttcccttatcactttagtctctgacgttaaa 40611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 220
Target Start/End: Complemental strand, 36827551 - 36827350
Alignment:
Q  19 atccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctga 118  Q
    |||| ||||||||||||||||| ||  |  ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||  |||||  |||    
T  36827551 atccttgactcaggattaaatataaaataatctctgaatgtacacttccgttatcactttagtctctgatgttaaataattttgttaagtgatgatgtga 36827452  T
Q  119 caaaagtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctcca 218  Q
    |||| || ||||||||| || | |  ||| || |||||  ||||||||||||| || |||||  | | |||| ||  |||| |||||||||||||| |||    
T  36827451 caaatgttttatgctgagaaggagcgtgaagtatcacagggactaaagtgaaaatagaaaatgattattttggtccctgaatcgaaaatcaatatcccca 36827352  T
Q  219 aa 220  Q
    ||    
T  36827351 aa 36827350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 40205934 - 40206118
Alignment:
Q  24 tgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaa 123  Q
    ||||||| ||||||| |||| || |||||||||||||||||||| |||||| |||||||  || ||||||| |||| | ||||   ||||  || ||||     
T  40205934 tgactcacgattaaaaacaaagtagtctctgaatgtgcacttccgttatcagtttagtcattggcgttaaaaaattatgttaactaatgaggtggcaaat 40206033  T
Q  124 gtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatc 208  Q
    || || ||||||||| | |  |||| |||||||  | |||||||||||||| ||||| ||||||||| || ||||||||||||||    
T  40206034 gttttgtgctgacaaggtgcgtgagttgtcacaagggctaaagtgaaagtataaaatggtcactttggtccttgaaccgaaaatc 40206118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 47118126 - 47118040
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||| ||||||||||||||| ||| |  |||||||| | ||||||| | |||||||||||||| |||||||||||||||||| ||||    
T  47118126 tccccgactcaggattaaatgcaaagaagtctctgactctgcactttcgttatcactttagtccctgacgttaaataattttgttaa 47118040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 2591776 - 2591849
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctc 216  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||| ||  |||| | ||||||||||||||    
T  2591776 tatgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctc 2591849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 19114581 - 19114660
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||||||| |||||||||||| |  ||| || | | ||||||||| ||||||||||||||||| |||||||||||||    
T  19114581 tccctgactcaagattaaatacaaagaagtcactaactttgcacttccgttatcactttagtctcttacgttaaataatt 19114660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 3671089 - 3671247
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    ||||||||| |||||||||||    |||| ||| | | ||||||| ||||||||||| || ||| ||||||| |||| | ||||  |||||  ||||| |    
T  3671089 ctgactcagaattaaatacaaataagtctatgactctccacttccgttatcactttaatccctgccgttaaaaaattatgttaagtgatgatgtgacaca 3671188  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaatt 181  Q
     || |||||||||||| ||||||||  ||||||   |||||||||||||||| ||||||    
T  3671189 tgttttatgctgacaaggggtatgacatgtcacggggactaaagtgaaagtagaaaatt 3671247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 55389441 - 55389371
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  ||||||||||||||||||    
T  55389441 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatat 55389371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 2591675 - 2591748
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaa 93  Q
    ||||||||||||||||||||||||    |||||||| | ||||||||||| |||||||||||| |||| |||||    
T  2591675 tccctgactcaggattaaatacaaacaagtctctgactctgcacttccatgatcactttagtccctgatgttaa 2591748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 47075385 - 47075340
Alignment:
Q  61 cacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  47075385 cacttccgttatcactttagtctctgacgttaaataattttgttaa 47075340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 17700568 - 17700640
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  17700568 cctgactcaggattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaa 17700640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 49261609 - 49261526
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||||||||||||||||||| ||   |||| | | |||| |||| ||||||||||||||||||||||||| | ||| ||||||    
T  49261609 tccctgactcaggattaaatacaaagt---ctctaactctgcatttccgttatcactttagtctctgacgttaatttattctattaa 49261526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 36279000 - 36279079
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||| ||||||||||||||||    |||||||| | ||||||||| |||||| ||||||| ||||||||||| ||||    
T  36279000 tccctgattcaggattaaatacaaataagtctctgactctgcacttccgttatcattttagtccctgacgttaaaaaatt 36279079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 36280389 - 36280318
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||||||||||||| ||    |||||||| | ||||||||| |||||||||||||| |||||||||||    
T  36280389 ctgactcaggattaaatataaataagtctctgactctgcacttccgttatcactttagtccctgacgttaaa 36280318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 17701994 - 17701920
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||| ||||||||||||    ||| |||| | ||||||||| |||||||||||||| |||||||||||    
T  17701994 tccctgactcaagattaaatacaaataagtccctgactctgcacttccgttatcactttagtccctgacgttaaa 17701920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 48573033 - 48573107
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    | |||||| | ||||||||| ||||||||||||||  ||||||||||    
T  48573033 tccctgactcaggattaaatacaaataagcctctgactctgcacttccgttatcactttagtccttgacgttaaa 48573107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 48573136 - 48573206
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  48573136 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatat 48573206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 48808523 - 48808593
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  48808523 tatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatat 48808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 48809627 - 48809557
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||||||||| |  |||||||||||||||| ||||| ||||||||| ||  |||||| |||||||||||    
T  48809627 tatgaggtgtcagaaggactaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatat 48809557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 11773126 - 11773053
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaa 93  Q
    ||||||||||||||||||||||||    |||||||| | | ||||||| |||||||||||||| ||| ||||||    
T  11773126 tccctgactcaggattaaatacaaataagtctctgactctacacttccgttatcactttagtccctggcgttaa 11773053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 27204208 - 27204167
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  27204208 tgaatgtgcacttccattatcagtttagtccctgacgttaaa 27204167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 48574431 - 48574354
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||  || ||||||| ||| |||||||| |||||    
T  48574431 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaa 48574354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 55388211 - 55388287
Alignment:
Q  144 atgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||| ||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  55388211 atgatgtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaa 55388287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 29188319 - 29188240
Alignment:
Q  167 tgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaactcgttccaacaaagtgttgttcttc 246  Q
    |||||||| ||||||||||||||| ||  ||||||||||||||||||    |||||||| ||||  || |||||||||||    
T  29188319 tgaaagtagaaaattgtcactttgatccctgaaccgaaaatcaatattcttaaactcgtcccaatgaaatgttgttcttc 29188240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 45601013 - 45600935
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||| |||||||||||||||| |  ||| |||| | ||||||||| ||||||||||||||   ||||||||||||||    
T  45601013 tccctgattcaggattaaatacaaagaagtc-ctgactctgcacttccgttatcactttagtccacgacgttaaataatt 45600935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 53959136 - 53959101
Alignment:
Q  59 tgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||| ||||||||||||||||||||||||||    
T  53959136 tgcacttccgttatcactttagtctctgacgttaaa 53959101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 48574534 - 48574460
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||| | ||||||||||||||  ||||||||||    
T  48574534 tccctgactcaggattaaatacaaataagtccctgactctgcactttcgttatcactttagtccttgacgttaaa 48574460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 53959072 - 53959002
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatat 213  Q
    |||||| |||||||  ||| |||||||||||| |||||||||||||||  |  |||||| |||||||||||    
T  53959072 tatgagctgtcacagggaccaaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatat 53959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 17700670 - 17700739
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaata 212  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||  ||||||||||    
T  17700670 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaata 17700739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 36279103 - 36279180
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  ||| |||||||||||| ||||| ||||||||| ||  |||||| ||||  |||||| |||||    
T  36279103 tatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaa 36279180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 52318289 - 52318212
Alignment:
Q  143 tatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    ||||||||||||||  | | |||||||||||| ||||| ||||||||| ||  |||||| |||| ||||||| |||||    
T  52318289 tatgaggtgtcacaaggtccaaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaa 52318212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 29188455 - 29188379
Alignment:
Q  30 aggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||| ||||| || |||  ||||| ||||||| |||||||||||||||   |||| |||||||||||| ||||    
T  29188455 aggattaattacaaagtagtcattgaatatgcactttcattatcactttagttcatgacattaaataattttgttaa 29188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 214
Target Start/End: Original strand, 5650 - 5839
Alignment:
Q  23 ctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaa 122  Q
    ||||||||| ||||||||||| |  ||| |||| | | ||||||| |||||||||||||||||| |||||||||||| | |||   |||||   |||| |    
T  5650 ctgactcagaattaaatacaaagaagtccctgactctacacttccgttatcactttagtctctggcgttaaataattatgttatgtgatgatgcgacaca 5749  T
Q  123 agtcttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
      | ||| | |||||   |  |||||||||||||  |||||||||||||||||||| | ||||||||| ||  |||||| ||||||||||||    
T  5750 tattttacgatgacat--gacatgaggtgtcacatagactaaagtgaaagtaaaaagtggtcactttgatccctgaaccaaaaatcaatatc 5839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 6185 - 6128
Alignment:
Q  163 aaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctccaaa 220  Q
    |||||||||||||||||| ||||||||| ||  |||||| |||||||||||| |||||    
T  6185 aaagtgaaagtaaaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaa 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 79756 - 79672
Alignment:
Q  22 cctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaa 106  Q
    ||||||||| |||||||||||| |  |||| ||| | |||| ||| ||||||| |||||||| ||||||||||||||||||||||    
T  79756 cctgactcatgattaaatacaaagaagtctttgactctgcatttctattatcattttagtctttgacgttaaataattttattaa 79672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 79171 - 79207
Alignment:
Q  70 tatcactttagtctctgacgttaaataattttattaa 106  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  79171 tatcactttagtctttgacgttaaataattttgttaa 79207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 3032 - 3193
Alignment:
Q  58 gtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttat-gctgacaaagggtatgaggtgtcaca 156  Q
    ||||| |||| |||||| ||||||||||| ||||||| | |||| ||||  ||||   ||||||| || || | |||||||| | | |||||||||||||    
T  3032 gtgcatttccgttatcagtttagtctctggcgttaaaaacttttgttaattgatggggtgacaaatgttttttcgctgacaaggtgcatgaggtgtcaca 3131  T
Q  157 ctgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctcca 218  Q
      || ||||||| ||||| ||||| |||| |||| ||  |||| ||||||||||||||||||    
T  3132 aggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatctcca 3193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 1771 - 1931
Alignment:
Q  58 gtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacac 157  Q
    |||||||||  |||||| ||||||||||| ||||||| | |||| ||||  ||||   |||| || || || ||||||||| | | |||||||||| ||     
T  1771 gtgcacttctgttatcagtttagtctctggcgttaaaaacttttgttaattgatggggtgacgaatgttttttgctgacaaggtgcatgaggtgtcgcaa 1870  T
Q  158 tgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctcca 218  Q
      ||||||||| ||||| ||||| |||| |||| ||  |||| ||||||||||||||||||    
T  1871 gaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatctcca 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 29856830 - 29856991
Alignment:
Q  58 gtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttat-gctgacaaagggtatgaggtgtcaca 156  Q
    ||||| |||| |||||| ||||||||||| ||||||| | |||| ||||  ||||   ||||||| || || | |||||||| | | |||||||||||||    
T  29856830 gtgcatttccgttatcagtttagtctctggcgttaaaaacttttgttaattgatggggtgacaaatgttttttcgctgacaaggtgcatgaggtgtcaca 29856929  T
Q  157 ctgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctcca 218  Q
      || ||||||| ||||| ||||| |||| |||| ||  |||| ||||||||||||||||||    
T  29856930 aggattaaagtggaagtagaaaatggtcattttggtctctgaatcgaaaatcaatatctcca 29856991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 6752701 - 6752653
Alignment:
Q  55 aatgtgcacttccattatcactttagtctctgacgttaaataattttat 103  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||    
T  6752701 aatgttcatttccgttatcactttagtctctgacgttaaataattttat 6752653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 29845566 - 29845726
Alignment:
Q  58 gtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgtcacac 157  Q
    |||||||||  |||||| ||||||||||| ||||||| | |||| ||||  ||||   |||| || || || ||||||||| | | |||||||||| ||     
T  29845566 gtgcacttctgttatcagtttagtctctggcgttaaaaacttttgttaattgatggggtgacgaatgttttttgctgacaaggtgcatgaggtgtcgcaa 29845665  T
Q  158 tgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatctcca 218  Q
      ||||||||| ||||| ||||| |||| |||| ||  |||| ||||||||||||||||||    
T  29845666 gaactaaagtggaagtagaaaatagtcattttggtctctgaatcgaaaatcaatatctcca 29845726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 180
Target Start/End: Original strand, 5265280 - 5265406
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgt 152  Q
    ||||||||||||||| |||||| ||||||| ||||||||||| |  | | ||||  |||||  ||||||| || || |||| |||| | | |||||||||    
T  5265280 tgaatgtgcacttccgttatcagtttagtc-ctgacgttaaaaacatctgttaattgatgaggtgacaaatgttttgtgctaacaaggtgcatgaggtgt 5265378  T
Q  153 cacactgactaaagtgaaagtaaaaaat 180  Q
    ||||  || |||||||||||||||||||    
T  5265379 cacatggagtaaagtgaaagtaaaaaat 5265406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 30748149 - 30748232
Alignment:
Q  131 gctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcactttgttcgttgaaccgaaaatcaatatc 214  Q
    |||||||| | |||||| ||||||||  |||||||||||||||||||||| |||| |||| ||  |||| | ||||||||||||    
T  30748149 gctgacaaggagtatgacgtgtcacagggactaaagtgaaagtaaaaaatggtcaatttggtccctgaatcaaaaatcaatatc 30748232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 31219194 - 31219156
Alignment:
Q  61 cacttccattatcactttagtctctgacgttaaataatt 99  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  31219194 cacttccgttatcactttagtctctgacgttaaataatt 31219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 12676538 - 12676479
Alignment:
Q  27 ctcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctg 86  Q
    ||||||||||||||||| || |||||| |||||||||||   |||||| |||||||||||    
T  12676538 ctcaggattaaatacaaagtagtctctaaatgtgcacttttgttatcagtttagtctctg 12676479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 29350278 - 29350115
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagt 125  Q
    ||||||||||||| |||| || ||  || |||||||| |||||||||||||||| ||| ||| | ||||| ||||| ||||  ||| || ||||||||      
T  29350278 actcaggattaaagacaaagtagttccttaatgtgcatttccattatcactttaatctttgaagataaatgattttgttaactgataacgtgacaaaaaa 29350179  T
Q  126 cttatgctgacaaagggtatgaggtgtcacactgactaaagtgaaagtaaaaaattgtcacttt 189  Q
     ||||| | |||| | |||||||||||      || |||||||| |||| ||||||||||||||    
T  29350178 tttatgataacaaggagtatgaggtgtataggagattaaagtgatagtagaaaattgtcacttt 29350115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 6468856 - 6468811
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcactt 65  Q
    ||||||||||| ||||||||||||  | ||||||||||||||||||    
T  6468856 tccctgactcatgattaaatacaaaatagtctctgaatgtgcactt 6468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 19600285 - 19600149
Alignment:
Q  53 tgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggtgt 152  Q
    ||||||||||||||| |||| | |||| ||  ||||||| || || ||||||||  |||||  ||||||| || || || |||||| | | ||||  |||    
T  19600285 tgaatgtgcacttccgttataagtttaatccttgacgttcaa-aactttattaattgatgaggtgacaaatgttttgtggtgacaaggtgcatgaaatgt 19600187  T
Q  153 cacactgactaaagtgaaagtaaaaaattgtcactttg 190  Q
    ||||  |||||||||||||||| ||||| |||||||||    
T  19600186 cacagggactaaagtgaaagtagaaaatggtcactttg 19600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 31219009 - 31219082
Alignment:
Q  26 actcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaataatt 99  Q
    |||||||||||||||||| |  ||  |||| | ||||||||| ||||||||||| || |||| |||||||||||    
T  31219009 actcaggattaaatacaaagaagttcctgactctgcacttccgttatcactttaatccctgatgttaaataatt 31219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 142321 - 142454
Alignment:
Q  51 tctgaatgtgcacttccattatcactttagtctctgacgttaaataattttattaaaagatgacctgacaaaagtcttatgctgacaaagggtatgaggt 150  Q
    ||||||||||||||||  |||||| |||||| |||||| ||| |||||||| ||||  || ||| || |||| || ||||| | | || | |||||||||    
T  142321 tctgaatgtgcacttctgttatcattttagtatctgacattatataattttgttaattgaagacgtggcaaatgttttatgattataaggagtatgaggt 142420  T
Q  151 gtcacactgactaaagtgaaagtaaaaaattgtca 185  Q
    ||||||  ||||||| ||||| || ||||||||||    
T  142421 gtcacaaagactaaaatgaaa-tagaaaattgtca 142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 9201 - 9137
Alignment:
Q  30 aggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctgacgttaaa 94  Q
    ||||||||||||||  | |||||||||| |||||||   |||||| |||||||||||||||||||    
T  9201 aggattaaatacaaaatagtctctgaatttgcacttttgttatcagtttagtctctgacgttaaa 9137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 116103 - 116170
Alignment:
Q  20 tccctgactcaggattaaatacaatgtggtctctgaatgtgcacttccattatcactttagtctctga 87  Q
    ||||||||||||||||||||||||    ||| |||| | ||||||||| |||||||||||||| ||||    
T  116103 tccctgactcaggattaaatacaaataagtccctgactatgcacttccgttatcactttagtccctga 116170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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