View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10311_high_12 (Length: 232)
Name: NF10311_high_12
Description: NF10311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10311_high_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 41262996 - 41262765
Alignment:
| Q |
1 |
ccgtcaaattgaaattgtgttgaatttgtatttgtactagaaactattacattatagcagtttagtgacagttgaaattttttccgcagatttcatatgg |
100 |
Q |
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| T |
41262996 |
ccgtcaaattgaaattgtgttgaatttgtatttgtactagaaactattacatcatagcagtttagtgacagttgaaattttttccgcagatttcatatgg |
41262897 |
T |
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| Q |
101 |
tcgatttttaccaaatgtcatgggatatcgcgatttagacatatttattcagcagaaagatgggaaaaagattttggatcctgagaagcagaatgcgcta |
200 |
Q |
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| T |
41262896 |
tcgatttttaccaaatgtcatgggatatcgcgatttagacatatttattcagcagaaagatgggaaaaagattttggatcctgagaagcagaatgcgcta |
41262797 |
T |
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| Q |
201 |
tgctctcgtttgaaacttgaaatgctacatcc |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
41262796 |
tgctctcgtttgaaacttgaaatgctacatcc |
41262765 |
T |
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