View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10311_low_6 (Length: 357)
Name: NF10311_low_6
Description: NF10311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10311_low_6 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 318; Significance: 1e-179; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 1847060 - 1846729
Alignment:
| Q |
16 |
aaagtttcctattaacattctgtttattggt---catgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaag |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1847060 |
aaagtttcctattaacattctgtttattggtggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaag |
1846961 |
T |
|
| Q |
113 |
gatgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagag |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1846960 |
gatgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagag |
1846861 |
T |
|
| Q |
213 |
gtatcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgat |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1846860 |
gtatcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgat |
1846761 |
T |
|
| Q |
313 |
caccggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
1846760 |
caccggagcatccgaagctgactgtgccgttc |
1846729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 25 - 344
Target Start/End: Complemental strand, 4620346 - 4620027
Alignment:
| Q |
25 |
tattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgag |
124 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
4620346 |
tattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggatgtcattgag |
4620247 |
T |
|
| Q |
125 |
agatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattg |
224 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4620246 |
cgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcg |
4620147 |
T |
|
| Q |
225 |
acatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatc |
324 |
Q |
| |
|
|||||||||| | ||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
4620146 |
acatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcaccggaacatc |
4620047 |
T |
|
| Q |
325 |
cgaagctgactgtgccgttc |
344 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
4620046 |
ccaagctgactgtgctgttc |
4620027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 314
Target Start/End: Original strand, 4787129 - 4787428
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaagga |
114 |
Q |
| |
|
||||| ||| |||||||||| || |||||||||| | | |||||||||||||||| || ||| ||||||| |||||||||||||||| |||| |||||| |
|
|
| T |
4787129 |
aaaaggttcgtattaacattgtggttattggtcaagccaactccgggaagtcaaccaccactgctcatttgctctacaagcttggaggcattggaaagga |
4787228 |
T |
|
| Q |
115 |
tgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggt |
214 |
Q |
| |
|
|||||| |||||| |||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
4787229 |
tgtcattgagagacttgagaaagaagcttatgaggctaactggccttcattcaagtatgcttgggtgcttgacaaactcaagggtgagcgtgaaagaggt |
4787328 |
T |
|
| Q |
215 |
atcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatca |
314 |
Q |
| |
|
|||||||||||||||| | | ||||||||||||| ||| | | ||||||| |||||||||| |||||||||||||| | ||||| ||||||||||| |
|
|
| T |
4787329 |
gccacaattgacatttctatgtccaagtttgagacaaacaagtacaactgcactgtcattgatgctcccggacacagggaatacattaggaacatgatca |
4787428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 25 - 338
Target Start/End: Complemental strand, 4298129 - 4297816
Alignment:
| Q |
25 |
tattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgag |
124 |
Q |
| |
|
|||||||||| || ||||||| |||| | |||||||||||||||| || ||| ||||||| ||||||| || ||||| ||||||||||||||||| ||| |
|
|
| T |
4298129 |
tattaacattgtggttattggccatgccaactccgggaagtcaaccactactgctcatttgctctacaaactcggaggcattgaaaaggatgtcattgag |
4298030 |
T |
|
| Q |
125 |
agatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattg |
224 |
Q |
| |
|
||| ||||||||| || || |||| | |||| || ||| ||||||||||||||||| |||||||| ||||| || || | |||||||||| |||||||| |
|
|
| T |
4298029 |
agacttgagaaagtagatgttgaggttaacatgccttcgttcaagtatgcttgggtacttgacaaactcaaagctgaccatgaaagaggtgccacaattg |
4297930 |
T |
|
| Q |
225 |
acatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatc |
324 |
Q |
| |
|
|||||||||| | ||||||||||||| ||| | | ||||| | ||||||||||||||||||| ||||| | |||||||||||||| ||| ||||| || |
|
|
| T |
4297929 |
acatttctctgtccaagtttgagacaaacaagtacaactgcattgtcattgatgcccccggacatagggaatgcattaagaacatgaccactggagcgtc |
4297830 |
T |
|
| Q |
325 |
cgaagctgactgtg |
338 |
Q |
| |
|
| |||| |||||| |
|
|
| T |
4297829 |
cctagctaactgtg |
4297816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 16 - 344
Target Start/End: Original strand, 7890664 - 7890992
Alignment:
| Q |
16 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7890664 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
7890763 |
T |
|
| Q |
116 |
gtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggta |
215 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7890764 |
gtcatcgatagatttgagaaagaagctgctgagatgaacaggcattcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggta |
7890863 |
T |
|
| Q |
216 |
tcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcac |
315 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7890864 |
tcacaattgacatttctctgtggaagtttgagacaaccaacttccgctgcactctcattgatgcccctggacacagggatttcattaagaacatgatcac |
7890963 |
T |
|
| Q |
316 |
cggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
||||| ||||||||||||||||| |||| |
|
|
| T |
7890964 |
tggagcgtccgaagctgactgtgctgttc |
7890992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 21 - 344
Target Start/End: Original strand, 7888404 - 7888727
Alignment:
| Q |
21 |
ttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcat |
120 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7888404 |
ttcctcttaactttctgtttattggtcatgttgattccgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattgaaaaggatgtcat |
7888503 |
T |
|
| Q |
121 |
cgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcaca |
220 |
Q |
| |
|
||||| | |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
7888504 |
cgagaaacttgagaaagaagctgctgagataaacagacgtttattcaagtatgcttgggtgcttgacaaactcaaggctgagcgtgaaagaggtatcaca |
7888603 |
T |
|
| Q |
221 |
attgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggag |
320 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||| || | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
7888604 |
attgacatttctctttggaagtttcagacaaccagctactgctgcactctcattgatgcccccggacacagggatttcatcaagaacatgatcaccgggg |
7888703 |
T |
|
| Q |
321 |
catccgaagctgactgtgccgttc |
344 |
Q |
| |
|
| || |||||||| ||||| |||| |
|
|
| T |
7888704 |
cgtctgaagctgattgtgctgttc |
7888727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 25 - 344
Target Start/End: Original strand, 38137489 - 38137808
Alignment:
| Q |
25 |
tattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgag |
124 |
Q |
| |
|
||||||| || || ||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
38137489 |
tattaacgttgtggttattggtcatgttgactctgggaagtcaactactgctggtcatttgatctacaaacttggaggtattgaaaaggatgtcattgag |
38137588 |
T |
|
| Q |
125 |
agatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattg |
224 |
Q |
| |
|
||| |||||||||||||| |||||||||||| || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38137589 |
agacttgagaaagaagctactgagataaacaagccatcgttcaagtatgcttgggtgctcgacaagctcaaggccgagcgtgaaagaggtatcactattg |
38137688 |
T |
|
| Q |
225 |
acatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatc |
324 |
Q |
| |
|
|||||||||| | ||||||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
38137689 |
acatttctctgtcaaagtttgagactaccaagtactactgcactctcattgatgcccccggacacagggatttcattaagaacatgattaccgggacgtc |
38137788 |
T |
|
| Q |
325 |
cgaagctgactgtgccgttc |
344 |
Q |
| |
|
| ||||||||||||| |||| |
|
|
| T |
38137789 |
ccaagctgactgtgctgttc |
38137808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 41 - 344
Target Start/End: Complemental strand, 43046087 - 43045784
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||||||||| ||||| ||||| || ||||||| |||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||| |
|
|
| T |
43046087 |
attggccatgtcgactctgggaaatcaaccaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtcattgagaggtttgagaaagaag |
43045988 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
43045987 |
ctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaa |
43045888 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
||||||||||||||| | | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
43045887 |
gtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgcc |
43045788 |
T |
|
| Q |
341 |
gttc |
344 |
Q |
| |
|
|||| |
|
|
| T |
43045787 |
gttc |
43045784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 41 - 344
Target Start/End: Complemental strand, 43084515 - 43084212
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||| ||||| ||||| ||||| || ||||||| |||||||||||||||||||||||||| ||| |||||| ||||| ||||||||||||| |
|
|
| T |
43084515 |
attggccatgttgactctgggaaatcaaccacaactggtcacttgatctacaagcttggaggtattgacaagcgtgtcatagagaggtttgagaaagaag |
43084416 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
43084415 |
ctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaa |
43084316 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
||||||||||||||| | | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
43084315 |
gtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgcc |
43084216 |
T |
|
| Q |
341 |
gttc |
344 |
Q |
| |
|
|||| |
|
|
| T |
43084215 |
gttc |
43084212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 41 - 344
Target Start/End: Complemental strand, 3301370 - 3301067
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||| ||| ||| || ||||| ||||||||||||| |
|
|
| T |
3301370 |
attggtcatgtcgactccgggaagtcaaccaccaccggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
3301271 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
3301270 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggtgctcgacaagctcaaggctgaatgtgaaagaggtatcacaattgacattgctctgtggaa |
3301171 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
||||||||| || || | | ||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||||| ||||| |
|
|
| T |
3301170 |
gtttgagactactaagtactactgcactgtcattgatgcccccggacacagggatttcattaagaacatgattactggaacatcccaagctgattgtgct |
3301071 |
T |
|
| Q |
341 |
gttc |
344 |
Q |
| |
|
|||| |
|
|
| T |
3301070 |
gttc |
3301067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 41 - 344
Target Start/End: Original strand, 43066320 - 43066623
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||||||||| || |||||||| || ||||||| || |||||||| |||||||||||||| ||| |||||| ||||| ||||||||||||| |
|
|
| T |
43066320 |
attggccatgtcgactctggcaagtcaaccaccactggtcacttaatctacaaacttggaggtattgacaagcgtgtcattgagaggtttgagaaagaag |
43066419 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||||||| |||| ||||| |
|
|
| T |
43066420 |
ctgctgagatgaacaagcgttcattcaagtatgcctgggttcttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaa |
43066519 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
||||||||||||||| | | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| |
|
|
| T |
43066520 |
gtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgcc |
43066619 |
T |
|
| Q |
341 |
gttc |
344 |
Q |
| |
|
|||| |
|
|
| T |
43066620 |
gttc |
43066623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 344
Target Start/End: Original strand, 45983331 - 45983660
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaagga |
114 |
Q |
| |
|
||||| ||| |||||||||| || ||||||||||||| ||||||||||||||||| || |||||||||||||| |||| |||||| ||||| | ||| |
|
|
| T |
45983331 |
aaaaggttcgtattaacattgtggttattggtcatgtggactccgggaagtcaaccactactggtcatttgatccacaaacttggatgtattcacaagag |
45983430 |
T |
|
| Q |
115 |
tgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggt |
214 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
45983431 |
tgtcattgagagtcttgagaaagaagctgctaagatgaacaagcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgaacgtgaaagaggt |
45983530 |
T |
|
| Q |
215 |
atcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatca |
314 |
Q |
| |
|
| |||||||||||| | || | |||||||||||||| ||| | | ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45983531 |
gttacaattgacattaccctgtcgaagtttgagacaaacaagtacaactgcactgtcattgatgcccccggacacagggatttcattaagaacatgatca |
45983630 |
T |
|
| Q |
315 |
ccggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
||||| | ||| ||||||||||||| |||| |
|
|
| T |
45983631 |
ccggaacgtcccaagctgactgtgctgttc |
45983660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 344
Target Start/End: Original strand, 45993111 - 45993440
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaagga |
114 |
Q |
| |
|
||||| ||||||||| |||| || ||||||||||||||||||||||||||||||| || |||||||||| ||| |||| |||||| ||||| | ||| |
|
|
| T |
45993111 |
aaaaggttcctattagcattgtggttattggtcatgtcgactccgggaagtcaaccactactggtcatttcatccacaaacttggatgtattcacaagag |
45993210 |
T |
|
| Q |
115 |
tgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggt |
214 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
45993211 |
tgtcatcgagagtcttgagaaagaagctgctgagatgatcaagcgttcattcaagtatgcttgggtgcttgacaagctcaagactgagcgtgaaagaggt |
45993310 |
T |
|
| Q |
215 |
atcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatca |
314 |
Q |
| |
|
||||||||||||| |||| | | |||||||||||||| ||| | | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
45993311 |
atcacaattgacagttctttgtcgaagtttgagacaaacaagtacagctgcactgtcattgatgcctccggacacagggatttcattaagaacatgatca |
45993410 |
T |
|
| Q |
315 |
ccggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
|||| | ||| ||||||| ||||| |||| |
|
|
| T |
45993411 |
ccgggacgtcccaagctgattgtgctgttc |
45993440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 15 - 318
Target Start/End: Complemental strand, 51292281 - 51291979
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaagga |
114 |
Q |
| |
|
||||| ||| |||||||||| ||||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
51292281 |
aaaaggttcgtattaacattgtgtttattggtcatgtcgactatggaaagtcaaatactgctggtcatttgatctacaagcttggaggtattgacaagaa |
51292182 |
T |
|
| Q |
115 |
tgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggt |
214 |
Q |
| |
|
|| ||| |||||| |||||||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
51292181 |
tgacattgagagacttgagaaagaagctactgagatgaacatgcgttcattcacgtatgcttgggtgcttgacaagttcaaggctgagcgtgaaagaggt |
51292082 |
T |
|
| Q |
215 |
atcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatca |
314 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |||| ||| | | |||||||||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
51292081 |
atcacaattgacatttctctatccaagtttga-acaatcaagtactattgcactctcattgatgcccccggacatgggaatttcattaagaacatgatcg |
51291983 |
T |
|
| Q |
315 |
ccgg |
318 |
Q |
| |
|
|||| |
|
|
| T |
51291982 |
ccgg |
51291979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 15 - 344
Target Start/End: Original strand, 40034319 - 40034646
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaagga |
114 |
Q |
| |
|
||||| ||| ||||||||| | ||||||||| |||||||||| ||||||||||| || | |||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
40034319 |
aaaaggttcatattaacatcgtatttattggtaatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagga |
40034418 |
T |
|
| Q |
115 |
tgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggt |
214 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
40034419 |
tgtcattgagaaatttgagaaagaagctgctgagatgaacaagcgctcattcaagtatgcttgggtacttgacaagctcaaggctgagcgtgaaagaggt |
40034518 |
T |
|
| Q |
215 |
atcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatca |
314 |
Q |
| |
|
| |||||||| ||||| | | ||||||||||||||||| | || ||||||||||||||| ||||||||||||| |||||||| ||||||||| | | |
|
|
| T |
40034519 |
gttacaattgatatttccatgtccaagtttgagacaaccaaataccactgcactctcattgacgcccccggacaca--gatttcatcaagaacatgttaa |
40034616 |
T |
|
| Q |
315 |
ccggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
|||| | ||| |||||||||||| |||| |
|
|
| T |
40034617 |
ccggcacgtccctagctgactgtgctgttc |
40034646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 99 - 344
Target Start/End: Complemental strand, 43045576 - 43045331
Alignment:
| Q |
99 |
gaggtattgaaaaggatgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggc |
198 |
Q |
| |
|
|||||||||| ||| |||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
43045576 |
gaggtattgacaagcgtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggc |
43045477 |
T |
|
| Q |
199 |
cgagcgtgaaagaggtatcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttc |
298 |
Q |
| |
|
|| ||||||||||||||||| ||||||||| |||| |||||||||||||||||||| | | ||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
43045476 |
tgaacgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttc |
43045377 |
T |
|
| Q |
299 |
attaagaacatgatcaccggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||| |||||||||| |
|
|
| T |
43045376 |
attaagaacatgatcaccggaacatcccaagctgattgtgccgttc |
43045331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 315
Target Start/End: Original strand, 43076477 - 43076707
Alignment:
| Q |
84 |
tgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgct |
183 |
Q |
| |
|
|||||||||| ||||||||| |||| ||| |||||| |||| ||||||| |||||||||||| || | | |||| |||||||||| ||| | || |
|
|
| T |
43076477 |
tgatctacaaacttggaggtgttgacaagagtgtcattgagaagtttgagatagaagctgctgaaatgggtaagacttcagtcaagtatgcctggatcct |
43076576 |
T |
|
| Q |
184 |
tgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgccccc |
283 |
Q |
| |
|
||||||||||| ||| || |||||||||||||| || ||||| |||||||| ||||||||||||||||| || | |||| | ||||||||| ||| |
|
|
| T |
43076577 |
tgacaagctcagggctgaacgtgaaagaggtat-accattgagatttctctctggaagtttgagacaacaaagaactgctgcgttgtcattgatgtcccg |
43076675 |
T |
|
| Q |
284 |
ggacacagggatttcattaagaacatgatcac |
315 |
Q |
| |
|
||||||| | |||||||||||||||||||||| |
|
|
| T |
43076676 |
ggacacaagaatttcattaagaacatgatcac |
43076707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 34691490 - 34691164
Alignment:
| Q |
16 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
115 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
34691490 |
aaaggttcatatcaacattgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagt |
34691391 |
T |
|
| Q |
116 |
gtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggta |
215 |
Q |
| |
|
| ||| ||| | ||| |||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
34691390 |
gccattgaggcacttgggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggta |
34691291 |
T |
|
| Q |
216 |
tcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcac |
315 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||| | | || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691290 |
tcacaattgacatt--tctatgcaagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcac |
34691193 |
T |
|
| Q |
316 |
cggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
||| | ||| ||||||||||||| |||| |
|
|
| T |
34691192 |
cgggacctcccaagctgactgtgctgttc |
34691164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 16 - 344
Target Start/End: Complemental strand, 34713902 - 34713576
Alignment:
| Q |
16 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
115 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
34713902 |
aaaggttcatatcaacattgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagt |
34713803 |
T |
|
| Q |
116 |
gtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggta |
215 |
Q |
| |
|
| ||| ||| | ||| |||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
34713802 |
gccattgaggcacttgggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggta |
34713703 |
T |
|
| Q |
216 |
tcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcac |
315 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||| | | || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
34713702 |
tcacaattgacatt--tctatgcaagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcac |
34713605 |
T |
|
| Q |
316 |
cggagcatccgaagctgactgtgccgttc |
344 |
Q |
| |
|
||| | ||| ||||||||||||| |||| |
|
|
| T |
34713604 |
cgggacctcccaagctgactgtgctgttc |
34713576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 29 - 344
Target Start/End: Complemental strand, 16232826 - 16232507
Alignment:
| Q |
29 |
aacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagat |
128 |
Q |
| |
|
|||||| | ||||||||||||||| | || ||||||||||| || || ||||||||| | |||||||||||||||||| ||||| || ||| ||| | |
|
|
| T |
16232826 |
aacattgtctttattggtcatgtcaattctgggaagtcaactactgccggtcatttgctttacaagcttggaggtattcaaaagagtgccattgaggcac |
16232727 |
T |
|
| Q |
129 |
ttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacat |
228 |
Q |
| |
|
||| |||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
16232726 |
ttgggaaagaagctgctgagatgaagatgcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacat |
16232627 |
T |
|
| Q |
229 |
ttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttc----attaagaacatgatcaccggagcatc |
324 |
Q |
| |
|
||| | || ||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| | || |
|
|
| T |
16232626 |
ttccatgtgcaagtttgagacaaccaagtactgttgcaccctcattgatgcccccggacacagggatttcattaattaagaacatgatcatcgggacctc |
16232527 |
T |
|
| Q |
325 |
cgaagctgactgtgccgttc |
344 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
16232526 |
cgaagctgactgtgctgttc |
16232507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 312
Target Start/End: Complemental strand, 33861504 - 33861205
Alignment:
| Q |
16 |
aaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggat |
115 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||||| ||||| ||||||||||| || | ||||||||| || ||||||||||| ||||||| ||| || |
|
|
| T |
33861504 |
aaagtttcatattaacattgtggttattggtcatgttgactctgggaagtcaaccacaaccggtcatttgctccacaagcttggatgtattgacaagcat |
33861405 |
T |
|
| Q |
116 |
gtcatcgagagatttgagaaagaagctgctgagataaacaggcgttcattcaagtatgc---ttgggtgcttgacaagctcaaggccgagcgtgaaagag |
212 |
Q |
| |
|
||||| || || ||||| ||||||||||| |||| ||| | |||||||||||||||| |||||| |||||||||||| |||| ||||||||||||| |
|
|
| T |
33861404 |
gtcattgacagtcttgaggaagaagctgctcagatcgacaagtgttcattcaagtatgctaattgggttcttgacaagctcgaggctgagcgtgaaagag |
33861305 |
T |
|
| Q |
213 |
gtatcacaattgacatttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgat |
312 |
Q |
| |
|
||||| | |||||| ||||| | | || |||||||||| | | | || | |||| ||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
33861304 |
gtatctccattgacgtttctatgcgtaattttgagacaaaccagtaccggtacactgtcattgatgcccctggacacagggattatattaagaacatgat |
33861205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 168; Significance: 6e-90; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 41 - 344
Target Start/End: Complemental strand, 4232107 - 4231804
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||| ||| ||| || ||||| ||||||||||||| |
|
|
| T |
4232107 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
4232008 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
4232007 |
ctgctgagatgaacaagcgttcatttaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
4231908 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
||||||||| || || | | ||||||| ||||||||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||| ||||| |
|
|
| T |
4231907 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgct |
4231808 |
T |
|
| Q |
341 |
gttc |
344 |
Q |
| |
|
|||| |
|
|
| T |
4231807 |
gttc |
4231804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 19964623 - 19964722
Alignment:
| Q |
27 |
ttaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagag |
126 |
Q |
| |
|
|||||||| || ||||||||||||| ||||| ||||||||||| || ||||||| |||||| ||||||||||| |||||| || ||||||| ||||| |
|
|
| T |
19964623 |
ttaacattgtggttattggtcatgttgactctgggaagtcaaccactactggtcacttgatccacaagcttggatatattgacaaccatgtcattgagag |
19964722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 129 - 339
Target Start/End: Complemental strand, 16349691 - 16349481
Alignment:
| Q |
129 |
ttgagaaagaagctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacat |
228 |
Q |
| |
|
||||||| ||||||||||| |||||| | ||| ||||||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
16349691 |
ttgagaataaagctgctgagttaaacaaggattctttcaagtatgcgtgggttcttgacaaactcaaggctgagcgcgaaagaggtatcacaattgacaa |
16349592 |
T |
|
| Q |
229 |
ttctctatggaagtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaa |
328 |
Q |
| |
|
|||| | | ||| |||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||||| || || ||||| || |
|
|
| T |
16349591 |
ttctatgttgaattttgagacaaccaagtaccgctgcactatcattgatgcccccggacacagggatttcattaagaacatgattactgggacatcccaa |
16349492 |
T |
|
| Q |
329 |
gctgactgtgc |
339 |
Q |
| |
|
||||| ||||| |
|
|
| T |
16349491 |
gctgattgtgc |
16349481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 16352294 - 16352207
Alignment:
| Q |
15 |
aaaagtttcctattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggagg |
102 |
Q |
| |
|
||||| ||| |||||||||| || |||||||||||||| |||| ||||||||||| || || ||||||||| |||||||||||||||| |
|
|
| T |
16352294 |
aaaaggttcatattaacattgtggttattggtcatgtcaactctgggaagtcaaccaccgccggtcatttgttctacaagcttggagg |
16352207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 342
Target Start/End: Original strand, 7528735 - 7529036
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||||||||| || || ||||| || ||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| |||| |
|
|
| T |
7528735 |
attggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagcgtgtgatcgagagatttgagaaggaag |
7528834 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||| ||||| |||||||| || ||||| |||||||||||||| || || || || ||| | | ||||| |
|
|
| T |
7528835 |
ctgctgagatgaacaagcgttcattcaagtatgcatgggttcttgacaaacttaaggctgagcgtgaaagaggaattaccatcgatattgccttgtggaa |
7528934 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgcc |
340 |
Q |
| |
|
|||||||| ||||| | | |||||| |||||||||| |||||||| | |||||||| ||||||||||| || ||| | ||| | ||||| |||||| |
|
|
| T |
7528935 |
atttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaagaacatgattactggaacctcccaggctgattgtgcc |
7529034 |
T |
|
| Q |
341 |
gt |
342 |
Q |
| |
|
|| |
|
|
| T |
7529035 |
gt |
7529036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 312
Target Start/End: Original strand, 7519364 - 7519635
Alignment:
| Q |
41 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaag |
140 |
Q |
| |
|
||||| ||||||||||| || || ||||| || ||||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||| ||||| |||| |
|
|
| T |
7519364 |
attggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagcgtgtgatcgagagattcgagaaggaag |
7519463 |
T |
|
| Q |
141 |
ctgctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaa |
240 |
Q |
| |
|
|||||||||| |||| | | || |||||||| || ||||| ||||||||||| ||||| |||||||||||||| || || ||||| ||| || | ||||| |
|
|
| T |
7519464 |
ctgctgagatgaacaagaggtctttcaagtacgcatgggttcttgacaagcttaaggctgagcgtgaaagaggaattaccattgatattgctttgtggaa |
7519563 |
T |
|
| Q |
241 |
gtttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgat |
312 |
Q |
| |
|
|||||||| ||||| | | |||||| |||||||||| |||||||| | |||||||| ||||||||||| |
|
|
| T |
7519564 |
atttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaagaacatgat |
7519635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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