View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10312_high_3 (Length: 594)
Name: NF10312_high_3
Description: NF10312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10312_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 538; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 17 - 586
Target Start/End: Complemental strand, 31692674 - 31692105
Alignment:
| Q |
17 |
gttttgctgttaaagctctttctttcatggtagtctcagaaagtgttttcagcttctccaaagctaaaccttcagttgtttttgcttcttccaactcttt |
116 |
Q |
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| T |
31692674 |
gttttgctgttaaagctctttctttcatggtagtctcagaaagtgttttaagcttctccaaagctaaagcttcagttgtttttgcttcttccaactcttt |
31692575 |
T |
|
| Q |
117 |
cataatgccttgcaatttttcctcactcgtatcaatctcaaaatcggttttttcaatttccaacttagttgttataatatcttgagatatgagctctttt |
216 |
Q |
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||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31692574 |
cataacgccttgcaatttttcctcactcgtatcaatctcaaactcggttttttcaatttccaacttagttgttataatatcttgagatatgagctctttt |
31692475 |
T |
|
| Q |
217 |
tccgttttagcttcatctgtttctttcttcagagtctcaagagaatgagatagactaactactaatgatcttgctttttcctctgcagcggatgcagctt |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
31692474 |
tccgttttagcttcatctgtttctttcttcagagtctcaagagaatgagatagactaactactaatgatcttgctttttcctctgcagcagatgcagctt |
31692375 |
T |
|
| Q |
317 |
ctagcttagattttgttcttagaacctttgaattgagattttgaaccgatgaatcgtttttcttcaagcgagctatttccttagttacatgcttcaactc |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
31692374 |
ctagcttagattttgttcttagaacctttgaattgagattttgaaccgatgaatcgtttttcttcaagcgagctatttccttagttacatgcttcagctc |
31692275 |
T |
|
| Q |
417 |
atttcttataacatccatagaagccataaactgaaaaccttcatctctaatcaaagctaattcttttattgcggcctcaagttcctcctttacagtttgt |
516 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
31692274 |
atttcttataacatccatagaagccataaactgaaaaccttcatctctaatcaaagctaattctttcgttgcggcctcaagttcctcctttacagtttgt |
31692175 |
T |
|
| Q |
517 |
aactcggtagagtctcctgattcgtcaccttttcttaaacttccttccaatagtttcacactttcatctc |
586 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31692174 |
aactcggtagagtctcctgattcgtcaccttttcttaaacttccttccaatagtttcacactttcatctc |
31692105 |
T |
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