View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10312_low_14 (Length: 254)
Name: NF10312_low_14
Description: NF10312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10312_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 42352965 - 42353203
Alignment:
| Q |
1 |
taaggcaaaagtgtttctatcactctttctagagagagacacaatacgaaaaccatattgtaaatataaagagtaaactatctttatatgcaagagtaat |
100 |
Q |
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| T |
42352965 |
taaggcaaaagtgtttctatcactctttctagagagagacacaatacgaaaaccatattgtaaatataaagagtaaactatctttatatgcaagagtaat |
42353064 |
T |
|
| Q |
101 |
tgtcaatatgtttt-tggcatgtaaagccttaattaattatgatgattgctacttgttaatttcttcttccccttttcagtaattaaggtgtcttcagtt |
199 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
42353065 |
tgtcaatatgttttttggcatgtaaagccttaattaattatgatgattgctacttgttaatttcttctaccccttttcagtaattaaggtgtcttcagtt |
42353164 |
T |
|
| Q |
200 |
aattaaattttctaactcattatcaatcatacatcaaag |
238 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
42353165 |
aattaaattttctaactcattatcaatcatacatcaaag |
42353203 |
T |
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