View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10314_low_5 (Length: 333)
Name: NF10314_low_5
Description: NF10314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10314_low_5 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 302; Significance: 1e-170; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 27878637 - 27878950
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27878637 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaggggctctgataccactgttaggtaccagagtaacaaaatatta |
27878736 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878737 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
27878836 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaaca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878837 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaaca |
27878936 |
T |
|
| Q |
301 |
ctaacactacctag |
314 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27878937 |
ctaacactacctag |
27878950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 1235016 - 1234796
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1235016 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
1234917 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
1234916 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactct |
1234817 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
1234816 |
ctcttataaataggagaatac |
1234796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 295
Target Start/End: Original strand, 26976133 - 26976353
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976133 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
26976232 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26976233 |
taaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactct |
26976332 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
26976333 |
ctcttataaataggagaatac |
26976353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 299
Target Start/End: Original strand, 27873992 - 27874216
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27873992 |
ttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
27874091 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874092 |
taaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
27874191 |
T |
|
| Q |
275 |
ctcttataaataggagaatacaaac |
299 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
27874192 |
ctcttataaataggagaatacaaac |
27874216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 75 - 259
Target Start/End: Complemental strand, 18968192 - 18968007
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
18968192 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaacaaa |
18968093 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagag |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |
|
|
| T |
18968092 |
taaggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagag |
18968007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 30986827 - 30986603
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaa---cccctcaac |
171 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| |
|
|
| T |
30986827 |
ttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaatattt-acgtggaaagtacccctcaac |
30986729 |
T |
|
| Q |
172 |
aaataaggggaaaaaa--ccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacc |
269 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30986728 |
aaataaggaaaaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaattacc |
30986629 |
T |
|
| Q |
270 |
actctctcttataaataggagaatac |
295 |
Q |
| |
|
|||||||||| ||||||| ||||||| |
|
|
| T |
30986628 |
actctctcttgtaaatagaagaatac |
30986603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 119 - 295
Target Start/End: Complemental strand, 30966923 - 30966747
Alignment:
| Q |
119 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaactttcacta |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
218 |
agtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaatac |
30966747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 30967797 - 30967674
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30967797 |
aagatttttcttaccacaccactagtttatcgcagcggaataacagctacgaactaaaggctctgataccactgttaggtaccagagtaacaaaatatta |
30967698 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacga |
124 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
30967697 |
tcaagcagctaaaataagagacga |
30967674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 78 - 264
Target Start/End: Complemental strand, 21966860 - 21966677
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
||||||| |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |
|
|
| T |
21966860 |
ggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataa |
21966763 |
T |
|
| Q |
178 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaa |
264 |
Q |
| |
|
|||||||| | | ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| | ||| |||||||||| |
|
|
| T |
21966762 |
agggaaaaatc-atggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaatttcaaagagagtacaa |
21966677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 241
Target Start/End: Original strand, 23012520 - 23012667
Alignment:
| Q |
92 |
aaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaacca |
190 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||| || ||||||||||||| | || |||||| | ||| |||||||| |
|
|
| T |
23012520 |
aaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacatta-tttacgtggaaactcgtc-acaaattaaggggaaaaacca |
23012617 |
T |
|
| Q |
191 |
cggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
241 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
23012618 |
-tgggcaagagtagagaactttcactaagtgagagaaatttcaagacctct |
23012667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 42266292 - 42265994
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
42266292 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttagataccagagtaacaaaatatta |
42266193 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266192 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
42266093 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaac |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266092 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaac |
42265994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 30950111 - 30950423
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30950111 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaggagctctgataccactgttaggtaccagagtaacaaaatatta |
30950210 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
30950211 |
tcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaaaaaaccacggggcaaga |
30950309 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaaca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950310 |
gtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccactctctcttataaataggagaatacaaaca |
30950409 |
T |
|
| Q |
301 |
ctaacactacctag |
314 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30950410 |
ctaacactacctag |
30950423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 48701749 - 48702043
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
48701749 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccagagtaacaaaatatta |
48701848 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701849 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
48701948 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
48701949 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatac |
48702043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 75 - 299
Target Start/End: Complemental strand, 42270937 - 42270713
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270937 |
ttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
42270838 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270837 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
42270738 |
T |
|
| Q |
275 |
ctcttataaataggagaatacaaac |
299 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
42270737 |
ctcttataaataggagaatacaaac |
42270713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 75 - 314
Target Start/End: Original strand, 30945479 - 30945717
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945479 |
ttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
30945578 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945579 |
taaggg-aaaaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccactct |
30945677 |
T |
|
| Q |
275 |
ctcttataaataggagaatacaaacactaacactacctag |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945678 |
ctcttataaataggagaatacaaacactaacactacctag |
30945717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 79 - 295
Target Start/End: Original strand, 24520031 - 24520247
Alignment:
| Q |
79 |
gtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
178 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520031 |
gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
24520130 |
T |
|
| Q |
179 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctct |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24520131 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctct |
24520230 |
T |
|
| Q |
279 |
tataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
24520231 |
tataaataggagaatac |
24520247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 75 - 295
Target Start/End: Original strand, 48697133 - 48697354
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697133 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
48697232 |
T |
|
| Q |
175 |
taagggg-aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactc |
273 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
48697233 |
taaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactc |
48697332 |
T |
|
| Q |
274 |
tctcttataaataggagaatac |
295 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
48697333 |
tctcttataaataggagaatac |
48697354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 75 - 303
Target Start/End: Complemental strand, 10427595 - 10427368
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10427595 |
ttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaacaaa |
10427496 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactc |
273 |
Q |
| |
|
|||||||||||||| |||||| || |||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||| ||| |
|
|
| T |
10427495 |
taaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-ctc |
10427397 |
T |
|
| Q |
274 |
tctcttataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||| |||||||||||||| ||||||| |
|
|
| T |
10427396 |
tctctt-gaaataggagaatactaacacta |
10427368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 86 - 281
Target Start/End: Complemental strand, 48783031 - 48782850
Alignment:
| Q |
86 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
185 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |
|
|
| T |
48783031 |
agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaatattt-acgtggaaatttctcaacaaataaagggaaaa |
48782933 |
T |
|
| Q |
186 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttat |
281 |
Q |
| |
|
| || |||| ||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
48782932 |
a--catgggg---------agaactttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1979375 - 1979269
Alignment:
| Q |
197 |
aagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaataca |
296 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| ||||||||| |||| ||||||| ||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacgacctctct--aaatgcaaggagggtatatttaccactctctcttataaacaggagaatact |
1979278 |
T |
|
| Q |
297 |
aacactaac |
305 |
Q |
| |
|
| ||||||| |
|
|
| T |
1979277 |
agcactaac |
1979269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 17248112 - 17248015
Alignment:
| Q |
126 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaa |
224 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| |||| || |||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaa |
17248015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 36615361 - 36615438
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
152 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | ||| |||||||||| | |||||||||| ||| ||||| ||| ||||| |
|
|
| T |
36615361 |
ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattattt |
36615438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 30165968 - 30165900
Alignment:
| Q |
84 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
152 |
Q |
| |
|
|||||||||||||| |||||| || ||||||||||| | ||||||| | ||| |||||||| ||||||| |
|
|
| T |
30165968 |
agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatattt |
30165900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 177
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
139 |
aacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 5823203 - 5823497
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5823203 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccagagtaacaaaatatta |
5823302 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823303 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
5823402 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823403 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggagaatac |
5823497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 2817191 - 2817486
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
||||||||||||||||| |||||||||||| || ||||||||||| |||||||||| | || |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2817191 |
aagatttttcttaccacaccactagtttattactgcggaataacaactacgaaccagcggctttgataccactgttaggtaccagagtaacaaaatatta |
2817290 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
2817291 |
tcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa-gggaaaaaaccacagggcaaga |
2817389 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacca--ctctctcttataaataggagaatac |
295 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
2817390 |
gtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccactctctctcttataaataggagaatac |
2817486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 75 - 314
Target Start/End: Complemental strand, 54546198 - 54545960
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
54546198 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaatattt-acgtggaaacccctcaacaaa |
54546100 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
54546099 |
taaggggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccactct |
54546000 |
T |
|
| Q |
275 |
ctcttataaataggagaatacaaacactaacactacctag |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54545999 |
ctcttataaataggagaatacaaacactaacactacctag |
54545960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 75 - 295
Target Start/End: Original strand, 5818515 - 5818735
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5818515 |
ttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaactaa |
5818614 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5818615 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactct |
5818714 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
5818715 |
ctcttataaataggagaatac |
5818735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 24659138 - 24659287
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24659138 |
ttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaacaaa |
24659237 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga |
226 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24659238 |
taaggggaaaaaaccacggggcaagagt--agaactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 4579360 - 4579254
Alignment:
| Q |
81 |
accagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
180 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579360 |
accagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
4579261 |
T |
|
| Q |
181 |
gaaaaaa |
187 |
Q |
| |
|
||||||| |
|
|
| T |
4579260 |
gaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 31204781 - 31204950
Alignment:
| Q |
87 |
gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaa |
186 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
31204781 |
gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaa |
31204878 |
T |
|
| Q |
187 |
accacgg-ggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
259 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||||||||| | |||||||| || ||||||||||| |||||||| |
|
|
| T |
31204879 |
atcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaac--ctctctaaatataaggagag |
31204950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 268
Target Start/End: Complemental strand, 35977258 - 35977103
Alignment:
| Q |
111 |
aaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtaga-gaac |
209 |
Q |
| |
|
|||||||||| |||||||||| || |||||| ||||||||| |||| ||| || |||||| ||| |||||||| ||| |||||||||| | || |
|
|
| T |
35977258 |
aaaataagaggtgagaaaagagaaattgaacaaacaatattt-acgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagt |
35977162 |
T |
|
| Q |
210 |
tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattac |
268 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
35977161 |
tttcactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac |
35977103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 25877142 - 25877086
Alignment:
| Q |
61 |
ctctgataccactattaggtaccagagtaacaaaatattatcacgcagctaaaataa |
117 |
Q |
| |
|
||||||||||||| |||||||||||| ||||| |||||||| ||||| ||||||||| |
|
|
| T |
25877142 |
ctctgataccactgttaggtaccagaataacataatattattacgcaactaaaataa |
25877086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 24671173 - 24671248
Alignment:
| Q |
226 |
aaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| |
|
|
| T |
24671173 |
aaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctctt-gaaataggagaatactaacacta |
24671248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 9444020 - 9444314
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
9444020 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccagagtaacaaaatatta |
9444119 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444120 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
9444219 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9444220 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatac |
9444314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 295
Target Start/End: Original strand, 9439374 - 9439594
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439374 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
9439473 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
9439474 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactct |
9439573 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
9439574 |
ctcttataaataggagaatac |
9439594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
| Q |
90 |
acaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacaca |
146 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
4799371 |
acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca |
4799315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 41718799 - 41718505
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
41718799 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccagagtaacaaaatatta |
41718700 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718699 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
41718600 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41718599 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttataaataggagaatac |
41718505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 34360271 - 34360051
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34360271 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaacaaa |
34360172 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34360171 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactct |
34360072 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
34360071 |
ctcttataaataggagaatac |
34360051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 75 - 295
Target Start/End: Complemental strand, 41723451 - 41723231
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723451 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
41723352 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
41723351 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactct |
41723252 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
41723251 |
ctcttataaataggagaatac |
41723231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 75 - 295
Target Start/End: Original strand, 29585302 - 29585522
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585302 |
ttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
29585401 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactct |
274 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
29585402 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccactct |
29585501 |
T |
|
| Q |
275 |
ctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
29585502 |
ctcttataaataggagaatac |
29585522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 92 - 295
Target Start/End: Complemental strand, 34352546 - 34352343
Alignment:
| Q |
92 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352546 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
34352447 |
T |
|
| Q |
192 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggaga |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352446 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga |
34352347 |
T |
|
| Q |
292 |
atac |
295 |
Q |
| |
|
|||| |
|
|
| T |
34352346 |
atac |
34352343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 206; Significance: 1e-112; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 82 - 295
Target Start/End: Original strand, 5198664 - 5198877
Alignment:
| Q |
82 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
181 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198664 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
5198763 |
T |
|
| Q |
182 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttat |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
5198764 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttat |
5198863 |
T |
|
| Q |
282 |
aaataggagaatac |
295 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5198864 |
aaataggagaatac |
5198877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 825868 - 825632
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
825868 |
aagatttttcttaccacttcactagtttatcacagcggaataacagctacgaaccagcggctctgataccactgttaggtaccagagtaacaaaatatta |
825769 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaag |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
825768 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaacaaataaggggaaaaaaaccacggggcaag |
825669 |
T |
|
| Q |
200 |
agtagagaactttcactaagtggaagaaattacagga |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
825668 |
agtagagaactttcactaagtggaagaaattacagga |
825632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 15603266 - 15602972
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccactattaggtaccagagtaacaaaatatta |
100 |
Q |
| |
|
||||| |||||||||||||||| ||||| | || |||||||||| |||||||||| |||||||||| |||| || ||| ||||||| ||||||||| |
|
|
| T |
15603266 |
aagatatttcttaccactccaccagttttttgcatcggaataacaattacgaaccaatgactctgatagcactgttgggtgtgagagtaagaaaatatta |
15603167 |
T |
|
| Q |
101 |
tcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
200 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603166 |
tcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaaga |
15603067 |
T |
|
| Q |
201 |
gtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| |||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
15603066 |
gtagagaactttcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaaataggagaatac |
15602972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 830450 - 830288
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830450 |
ttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
830351 |
T |
|
| Q |
175 |
taaggggaa-aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
236 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
830350 |
taaggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaattacagga |
830288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 80 - 303
Target Start/End: Complemental strand, 28716070 - 28715849
Alignment:
| Q |
80 |
taccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagg |
179 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
28716070 |
taccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaatattt-acgtggaaacccctcattaaataagg |
28715972 |
T |
|
| Q |
180 |
ggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctctt |
279 |
Q |
| |
|
||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | || | |
|
|
| T |
28715971 |
ggaaaaa-ccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcct |
28715873 |
T |
|
| Q |
280 |
ataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||||||||||||| ||||||| |
|
|
| T |
28715872 |
ataaataggagaatactaacacta |
28715849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 30396909 - 30397096
Alignment:
| Q |
71 |
actattaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
170 |
Q |
| |
|
|||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||| |
|
|
| T |
30396909 |
actattgggtgccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacac-atatttt-cgttgaaacccctcaa |
30397006 |
T |
|
| Q |
171 |
caaataaggggaaaaaaccacggggcaagagtagagaac-tttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
259 |
Q |
| |
|
|||||||||| |||||| ||| |||| |||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
30397007 |
caaataagggaaaaaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagag |
30397096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
| Q |
142 |
acacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
241 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||| | || || |||| |||| ||||| ||||||||||||||||||||||| || |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataaggagaaaaatt-ataggttaaaagtatagaattttcattaagtggaagaaattacaggacccct |
13843962 |
T |
|
| Q |
242 |
ctctaaatacaaggagagtacaattaccactctctcttataaataggagaat |
293 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| | ||| |||||||||||| |
|
|
| T |
13843963 |
ttataaatacaagaagaataaaattaccactctattttaaaaataggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 31592923 - 31593068
Alignment:
| Q |
86 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
185 |
Q |
| |
|
||||||| ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| |||||| | |||| |
|
|
| T |
31592923 |
agtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaataaataa-gaaaaaa |
31593021 |
T |
|
| Q |
186 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
233 |
Q |
| |
|
|||||| | |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
31593022 |
aaccac-agataagagtagagaactttcactaaccgaaagaaattaca |
31593068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 301
Target Start/End: Complemental strand, 8004292 - 8004161
Alignment:
| Q |
168 |
caacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaatta |
267 |
Q |
| |
|
||||||||||| ||||||| | |||||| | || |||| |||||||||| | |||||||||||| | |||||||| ||||| ||| |||||||||||| |
|
|
| T |
8004292 |
caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
268 |
ccactctctcttataaataggagaatacaaacac |
301 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
8004193 |
-cactctctcttataaataggagaatactaacac |
8004161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 295
Target Start/End: Original strand, 13840245 - 13840456
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
||||||||| |||||||||||||||||| | || ||||| ||| |||||| ||||||| ||||||| |||||| || || || |||||||||| || |
|
|
| T |
13840245 |
ggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacaca--atattt-acatgagaattcctcaacaaacaa |
13840341 |
T |
|
| Q |
178 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctc |
277 |
Q |
| |
|
|||| |||| || || ||||||||||| || ||| || |||| || |||||||| ||||||||||||||| ||||||||||||||||| | |||||| |
|
|
| T |
13840342 |
gggggaaaa--catggagcaagagtagaaaatttttaccaagtaaaa-aaattacaaaacctctctctaaatataaggagagtacaattacaattctctc |
13840438 |
T |
|
| Q |
278 |
ttataaataggagaatac |
295 |
Q |
| |
|
||| ||||| ||||||| |
|
|
| T |
13840439 |
ttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 208
Target Start/End: Original strand, 12175768 - 12175881
Alignment:
| Q |
93 |
aaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacg |
192 |
Q |
| |
|
||||||||||||||| ||||||||| ||| || |||| || || ||||||||||||||||| |||||||| ||||| |||||| ||||||||| | |
|
|
| T |
12175768 |
aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttt-tgtggaaacatctcaataaataa-tggaaaaaacaatt |
12175865 |
T |
|
| Q |
193 |
gggcaagagtagagaa |
208 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
12175866 |
ggacaagagtagagaa |
12175881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
| Q |
88 |
taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact |
137 |
Q |
| |
|
|||| ||||||||| |||||||||||| || ||||||||||||| ||||| |
|
|
| T |
9358158 |
taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact |
9358207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 243
Target Start/End: Complemental strand, 42117876 - 42117769
Alignment:
| Q |
134 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
233 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||| ||||||||| | ||| |||||| |||||||| ||| | |||||||| | |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataagggga-aaaaccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
234 |
ggacctctct |
243 |
Q |
| |
|
||||||||| |
|
|
| T |
42117778 |
agacctctct |
42117769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 825635 - 825607
Alignment:
| Q |
286 |
aggagaatacaaacactaacactacctag |
314 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctag |
825607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 314
Target Start/End: Complemental strand, 830291 - 830263
Alignment:
| Q |
286 |
aggagaatacaaacactaacactacctag |
314 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctag |
830263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 78 - 303
Target Start/End: Original strand, 16183636 - 16183860
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183636 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
16183735 |
T |
|
| Q |
178 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctct |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
16183736 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctct |
16183834 |
T |
|
| Q |
277 |
cttataaataggagaatacaaacacta |
303 |
Q |
| |
|
||| |||||||||||||| ||||||| |
|
|
| T |
16183835 |
ctt-gaaataggagaatactaacacta |
16183860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 78 - 310
Target Start/End: Complemental strand, 30235334 - 30235101
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
30235334 |
ggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacgaataa |
30235236 |
T |
|
| Q |
178 |
ggggaaaaaa-ccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctc-taaatacaaggagagtacaattaccactctc |
275 |
Q |
| |
|
|||||||||| ||||||| ||||||||| |||||||| ||| | ||||||||||||||||||||||| || || |||||||||||||||||||||||| |
|
|
| T |
30235235 |
ggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctctctcctatttataaggagagtacaattaccactctc |
30235136 |
T |
|
| Q |
276 |
tcttataaataggagaatacaaacactaacactac |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
30235135 |
tcttataaataggagaatacaaacactaacactac |
30235101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 49 - 295
Target Start/End: Original strand, 8139940 - 8140183
Alignment:
| Q |
49 |
acgaaccaaggactctgataccactattaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaat |
148 |
Q |
| |
|
||||||||| | |||| |||||||| || ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||| |
|
|
| T |
8139940 |
acgaaccaatggctctaataccactgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaat |
8140039 |
T |
|
| Q |
149 |
attttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaa |
248 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||| ||||||| |||| |||| |||| |||||||||| |||||||||||||| | ||||||||||| || |
|
|
| T |
8140040 |
attt-atgtggaaacccctcaacaaataaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaa |
8140138 |
T |
|
| Q |
249 |
tacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||| ||||||| ||||||||| |||||||||||||| |
|
|
| T |
8140139 |
tacaaggagagacaaattacc-ctctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 49 - 259
Target Start/End: Original strand, 8138436 - 8138645
Alignment:
| Q |
49 |
acgaaccaaggactctgataccactattaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaat |
148 |
Q |
| |
|
||||||||| | |||| |||||||| || |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||||| | |
|
|
| T |
8138436 |
acgaaccaatggctctaataccactgttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagt |
8138535 |
T |
|
| Q |
149 |
attttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaa |
248 |
Q |
| |
|
| || | |||||||||||| |||||| ||||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
8138536 |
aatt-atgtggaaaccccttaacaaacaaggggagaaaaccacgaggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaa |
8138634 |
T |
|
| Q |
249 |
tacaaggagag |
259 |
Q |
| |
|
||||||||||| |
|
|
| T |
8138635 |
tacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 231
Target Start/End: Original strand, 5102606 - 5102749
Alignment:
| Q |
86 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaa-gaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaa |
184 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||| ||||||| |||| ||| || ||| ||||||| || || |||||| |||||||||||||||||| |
|
|
| T |
5102606 |
agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataatattt-acatgaaaaccc-tcaacaaataaggggaaa |
5102703 |
T |
|
| Q |
185 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
231 |
Q |
| |
|
|| ||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102704 |
aa-ccatggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25441148 - 25441076
Alignment:
| Q |
1 |
aagatttttcttaccactccactagtttatcacagcggaataacagctacgaaccaaggactctgataccact |
73 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| | ||||||||||||| |
|
|
| T |
25441148 |
aagatttttcttaccactccactagtttatcacagcggaataacaactacaaatcaatggctctgataccact |
25441076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 36528420 - 36528529
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
|||| |||||||||||| || || ||||| ||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || ||||| |
|
|
| T |
36528420 |
ggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacgaataa |
36528518 |
T |
|
| Q |
178 |
ggggaaaaaac |
188 |
Q |
| |
|
|| ||||||| |
|
|
| T |
36528519 |
ggaaaaaaaac |
36528529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 75 - 303
Target Start/End: Original strand, 27228 - 27455
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27228 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaacaaa |
27327 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactc |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| || |
|
|
| T |
27328 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca-tc |
27426 |
T |
|
| Q |
274 |
tctcttataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||| ||||||| |||||| ||||||| |
|
|
| T |
27427 |
tctctt-gaaataggtgaatactaacacta |
27455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 7e-80; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 75 - 303
Target Start/End: Complemental strand, 46191544 - 46191319
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46191544 |
ttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaacaaa |
46191447 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactc |
273 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||| ||||||| ||| |
|
|
| T |
46191446 |
taaggggaaaaaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc-ctc |
46191348 |
T |
|
| Q |
274 |
tctcttataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||| |||||||||||||| ||||||| |
|
|
| T |
46191347 |
tctctt-gaaataggagaatactaacacta |
46191319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 78 - 259
Target Start/End: Original strand, 30697120 - 30697300
Alignment:
| Q |
78 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
177 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
30697120 |
ggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa |
30697218 |
T |
|
| Q |
178 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
259 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
30697219 |
ggggaaaaagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctttctaaatacaaggagag |
30697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 75 - 303
Target Start/End: Complemental strand, 4130399 - 4130173
Alignment:
| Q |
75 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaa |
174 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |
|
|
| T |
4130399 |
ttaggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaaaattt-acgtggaaatccctcaacaaa |
4130301 |
T |
|
| Q |
175 |
taaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactc |
273 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||| ||| |
|
|
| T |
4130300 |
taaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagagacaaattacc-ctc |
4130202 |
T |
|
| Q |
274 |
tctcttataaataggagaatacaaacacta |
303 |
Q |
| |
|
|||||| |||||||| ||||| ||||||| |
|
|
| T |
4130201 |
tctctt-gaaataggacaatactaacacta |
4130173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 30674787 - 30674865
Alignment:
| Q |
215 |
ctaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
295 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||| | |||||||| ||||||| || |||||||| | ||||||||||||| |
|
|
| T |
30674787 |
ctaagtggaagaaattatacaacctctcactaaaaataaggagagaacaatta-cattctctcttgt-aataggagaatac |
30674865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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