View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10315_low_3 (Length: 250)
Name: NF10315_low_3
Description: NF10315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10315_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 47429745 - 47429506
Alignment:
| Q |
1 |
atgtgaaagtggatgatgcttggaatcttcaattttcgaaatagctaacgatggttagttaatatccttgactagatcaaagccaaacccaaaacactac |
100 |
Q |
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| T |
47429745 |
atgtgaaagtggatgatgcttggaatcttcaattttcgaaatagctaacgatggttagttaatatccttgactagatcaaagccaaacccaaaacactac |
47429646 |
T |
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| Q |
101 |
aacagcatagagatnnnnnnntccaagtcaacacaacatttttaattaatttgtgctaatttataatttatgttaacattaaactgaattagagttaagc |
200 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47429645 |
aacagcatagagataaaaaa-tccaagtcaacacaacatttttaattaatttgtgctaatttataatttatgttaacattaaactgaattagagttaagc |
47429547 |
T |
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| Q |
201 |
aattaaatactgcatttgatcatcaaaatcataattcatct |
241 |
Q |
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| T |
47429546 |
aattaaatactgcatttaatcatcaaaatcataattcatct |
47429506 |
T |
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