View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10316_high_6 (Length: 250)
Name: NF10316_high_6
Description: NF10316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10316_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 10359373 - 10359611
Alignment:
| Q |
1 |
accattttgcattcatctaatcaaatctaaattaaatcaatatgatcaataatgaatcaattttgatattaatcattagattcatcatttttcatatctt |
100 |
Q |
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| T |
10359373 |
accattttgcattcatctaatcaaatctaaattaaatcaatatgatcaataatgaatcaattttgatattaatcattagattcattatttttcatatctt |
10359472 |
T |
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| Q |
101 |
gctcccaaaatcaacattccttgaaactagatatcatggtcatcacctattgttatcataaatcaagagtcaattttcgagaaatggagctcaccataaa |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
10359473 |
gctcacaaaatcaacattccttgaaactagatatcatggtcatcacctattgttatcataaatcaagagtcgattttcgagaaatggagctcaccataat |
10359572 |
T |
|
| Q |
201 |
ttgtcaacgttgctgagattttattctggttttcttcat |
239 |
Q |
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|||||||||||| |||||||||||||||||||||||||| |
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| T |
10359573 |
ttgtcaacgttgatgagattttattctggttttcttcat |
10359611 |
T |
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