View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_high_2 (Length: 516)
Name: NF10317_high_2
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 499; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 1 - 507
Target Start/End: Original strand, 39350451 - 39350957
Alignment:
| Q |
1 |
ttctcttagtaagtgttttcttcaattgaattgattgatttcattatcgtcgcatggattgtttattgatcttgtttgcatttaatttcaatcctcagtt |
100 |
Q |
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| T |
39350451 |
ttctcttagtaagtgttttcttcaattgaattgattgatttcattatcgtcgcatggattgtttattgatcttgtttgcatttaatttcaatcctcagtt |
39350550 |
T |
|
| Q |
101 |
acttacgttaatggattattaggtcaaaattctaatgagaatcaccaaccagttatggttcaaaaagctcctcttcctaacgaggttccaaaggattttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39350551 |
acttacgttaatggattattaggtcaaaattctaatgagaatcaccaaccagttatggttcaaaaagctcctcttcctaacgaggttccaaaggattttg |
39350650 |
T |
|
| Q |
201 |
agaattactcttctagtaagtgttttttctctacttcactttaatttgtaacatgatgattgcattactctttcatcaaaactatgcattccatttcatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39350651 |
agaattactcttctagtaagtgttttttctctacttcactttaatttgtaacatgatgattgcattactctttcatcaaaactatgcattccatttcatt |
39350750 |
T |
|
| Q |
301 |
tcaatcctcaataacataatttgatatattattaggtcaaatatatagatttcatttcaaaccttggttacataagttgatatattattaggtcaaaatt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
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| T |
39350751 |
tcaatcctcaataacataatttgatatattattaggtcaaatatatagatttcatttcaaaccttgtttacataagttgatatattgttaggtcaaaatt |
39350850 |
T |
|
| Q |
401 |
attcgaagattctccaaccagttaaggcagaagaagctcttgttccaaaggaggttccacggactttggatgagtgttctcttagtaagtgttttcttct |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39350851 |
attcgaagattctccaaccagttaaggcagaagaagctcttgttccaaaggaggttccacggactttggatgagtgttctcttagtaagtgttttcttct |
39350950 |
T |
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| Q |
501 |
ctgcttc |
507 |
Q |
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||||||| |
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| T |
39350951 |
ctgcttc |
39350957 |
T |
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