View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10317_high_3 (Length: 516)

Name: NF10317_high_3
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10317_high_3
NF10317_high_3
[»] chr2 (49 HSPs)
chr2 (19-185)||(2920735-2920901)
chr2 (220-404)||(2920515-2920700)
chr2 (363-514)||(24512141-24512292)
chr2 (364-512)||(41500184-41500332)
chr2 (323-458)||(2917617-2917752)
chr2 (390-514)||(43491110-43491234)
chr2 (449-514)||(2920464-2920529)
chr2 (417-514)||(39393065-39393162)
chr2 (322-463)||(45475373-45475514)
chr2 (451-514)||(40679545-40679608)
chr2 (364-514)||(2648092-2648242)
chr2 (386-514)||(34638138-34638262)
chr2 (363-463)||(19187222-19187322)
chr2 (414-508)||(10365746-10365840)
chr2 (450-514)||(29093779-29093840)
chr2 (363-465)||(34918426-34918528)
chr2 (364-465)||(25184827-25184927)
chr2 (322-463)||(34921758-34921898)
chr2 (324-462)||(8268749-8268887)
chr2 (364-462)||(35493341-35493439)
chr2 (364-465)||(82259-82359)
chr2 (386-463)||(12908428-12908505)
chr2 (323-443)||(23409520-23409640)
chr2 (375-463)||(34639313-34639401)
chr2 (323-415)||(45479841-45479933)
chr2 (364-443)||(1149447-1149526)
chr2 (451-514)||(26858175-26858238)
chr2 (366-465)||(43943666-43943765)
chr2 (326-444)||(41181374-41181492)
chr2 (462-514)||(16580559-16580611)
chr2 (386-473)||(17424128-17424216)
chr2 (383-430)||(12905543-12905590)
chr2 (326-441)||(28342460-28342575)
chr2 (364-442)||(1101072-1101150)
chr2 (383-465)||(3795331-3795413)
chr2 (383-465)||(40156393-40156475)
chr2 (325-430)||(19186683-19186788)
chr2 (416-512)||(43982226-43982326)
chr2 (386-465)||(24601636-24601715)
chr2 (386-465)||(24612399-24612478)
chr2 (382-465)||(29407884-29407967)
chr2 (374-440)||(41053690-41053756)
chr2 (364-462)||(45137433-45137531)
chr2 (367-444)||(2648776-2648853)
chr2 (364-465)||(27276371-27276472)
chr2 (359-419)||(23786094-23786154)
chr2 (387-443)||(36255732-36255788)
chr2 (413-465)||(41053565-41053617)
chr2 (363-399)||(43493320-43493356)
[»] chr5 (39 HSPs)
chr5 (364-514)||(18307229-18307379)
chr5 (320-500)||(20192284-20192464)
chr5 (326-514)||(3600273-3600462)
chr5 (386-514)||(542738-542866)
chr5 (323-463)||(18538334-18538474)
chr5 (398-514)||(25497520-25497636)
chr5 (323-443)||(34682191-34682311)
chr5 (320-462)||(3603148-3603290)
chr5 (421-514)||(11346039-11346133)
chr5 (450-512)||(42865754-42865816)
chr5 (326-462)||(20200148-20200284)
chr5 (449-514)||(35564321-35564386)
chr5 (364-464)||(34123933-34124033)
chr5 (359-464)||(38968065-38968170)
chr5 (321-462)||(25499887-25500030)
chr5 (319-458)||(1398534-1398673)
chr5 (323-430)||(35567059-35567166)
chr5 (449-514)||(8537225-8537291)
chr5 (326-430)||(18310053-18310157)
chr5 (322-430)||(19228678-19228786)
chr5 (364-463)||(33993255-33993354)
chr5 (383-465)||(33995145-33995227)
chr5 (359-465)||(34122494-34122600)
chr5 (416-512)||(19037416-19037516)
chr5 (323-444)||(24053114-24053235)
chr5 (393-458)||(30354400-30354465)
chr5 (357-464)||(8702196-8702303)
chr5 (383-465)||(17965843-17965925)
chr5 (326-460)||(42539375-42539509)
chr5 (364-465)||(17966883-17966984)
chr5 (364-465)||(41798793-41798894)
chr5 (364-429)||(42865811-42865876)
chr5 (474-514)||(1401388-1401428)
chr5 (386-512)||(30708899-30709030)
chr5 (421-512)||(7994-8088)
chr5 (386-465)||(30192489-30192568)
chr5 (376-462)||(28388519-28388605)
chr5 (421-465)||(7762241-7762285)
chr5 (384-506)||(28880316-28880443)
[»] chr8 (30 HSPs)
chr8 (326-514)||(18441389-18441577)
chr8 (319-512)||(41858073-41858264)
chr8 (324-512)||(42602395-42602583)
chr8 (424-510)||(26451515-26451601)
chr8 (450-514)||(3395927-3395991)
chr8 (326-462)||(18438571-18438707)
chr8 (449-514)||(41274652-41274717)
chr8 (450-514)||(22547504-22547568)
chr8 (327-463)||(41855306-41855442)
chr8 (323-443)||(7168022-7168142)
chr8 (371-462)||(42605234-42605325)
chr8 (325-463)||(22577601-22577739)
chr8 (364-464)||(1114718-1114818)
chr8 (385-464)||(34823014-34823093)
chr8 (359-465)||(35962277-35962383)
chr8 (450-500)||(38871834-38871884)
chr8 (322-415)||(3395825-3395918)
chr8 (382-430)||(4866427-4866475)
chr8 (364-463)||(18205761-18205860)
chr8 (455-514)||(24860448-24860507)
chr8 (450-512)||(37779713-37779773)
chr8 (383-465)||(21406261-21406343)
chr8 (383-465)||(21800753-21800835)
chr8 (359-443)||(7172606-7172690)
chr8 (363-403)||(28168658-28168698)
chr8 (364-440)||(45454381-45454457)
chr8 (449-512)||(15033095-15033160)
chr8 (383-465)||(21835176-21835258)
chr8 (326-464)||(40077248-40077386)
chr8 (385-465)||(7121783-7121863)
[»] chr3 (61 HSPs)
chr3 (364-512)||(41802973-41803121)
chr3 (383-514)||(34694382-34694513)
chr3 (323-514)||(45101796-45101987)
chr3 (364-512)||(51402348-51402496)
chr3 (376-512)||(55207613-55207749)
chr3 (364-514)||(13896824-13896974)
chr3 (318-463)||(29929355-29929500)
chr3 (318-463)||(29978509-29978654)
chr3 (326-514)||(41577012-41577200)
chr3 (374-514)||(55385122-55385262)
chr3 (374-514)||(43476176-43476317)
chr3 (366-514)||(52570514-52570661)
chr3 (364-510)||(41137693-41137829)
chr3 (324-463)||(28611099-28611238)
chr3 (449-514)||(51696522-51696587)
chr3 (450-514)||(19454299-19454363)
chr3 (417-503)||(24703374-24703460)
chr3 (384-514)||(49219739-49219869)
chr3 (318-463)||(29918340-29918485)
chr3 (318-463)||(29967493-29967638)
chr3 (321-462)||(41579724-41579865)
chr3 (359-463)||(42756129-42756233)
chr3 (391-511)||(46347672-46347791)
chr3 (416-514)||(4004750-4004849)
chr3 (452-514)||(7245155-7245217)
chr3 (421-514)||(36134355-36134449)
chr3 (376-514)||(49609370-49609508)
chr3 (321-462)||(2432943-2433084)
chr3 (449-514)||(43568926-43568991)
chr3 (319-459)||(30256006-30256146)
chr3 (363-443)||(46344911-46344991)
chr3 (450-514)||(2271260-2271325)
chr3 (323-430)||(43571717-43571824)
chr3 (383-514)||(34648150-34648283)
chr3 (386-512)||(2647648-2647776)
chr3 (384-465)||(34691620-34691701)
chr3 (366-458)||(7247864-7247956)
chr3 (364-462)||(49268845-49268943)
chr3 (326-443)||(41805694-41805811)
chr3 (416-512)||(49140793-49140893)
chr3 (374-430)||(7839531-7839587)
chr3 (324-404)||(42807658-42807738)
chr3 (364-464)||(49196447-49196547)
chr3 (386-465)||(32593109-32593188)
chr3 (464-514)||(2426559-2426609)
chr3 (383-465)||(2743392-2743474)
chr3 (384-462)||(19440251-19440329)
chr3 (388-510)||(20366191-20366313)
chr3 (416-512)||(34049107-34049207)
chr3 (319-460)||(48888671-48888811)
chr3 (416-512)||(54389822-54389922)
chr3 (374-465)||(600541-600632)
chr3 (374-465)||(19341591-19341682)
chr3 (386-465)||(24700718-24700797)
chr3 (375-465)||(48246398-48246488)
chr3 (364-461)||(11380416-11380513)
chr3 (374-459)||(46989532-46989617)
chr3 (374-463)||(48250868-48250957)
chr3 (326-463)||(52567700-52567837)
chr3 (390-462)||(9582548-9582620)
chr3 (383-443)||(13743287-13743347)
[»] chr6 (34 HSPs)
chr6 (363-514)||(12783905-12784056)
chr6 (368-514)||(13401465-13401611)
chr6 (450-514)||(29061331-29061395)
chr6 (452-514)||(29065791-29065853)
chr6 (452-514)||(29074804-29074866)
chr6 (452-514)||(29079568-29079630)
chr6 (452-514)||(29107377-29107439)
chr6 (323-430)||(13479660-13479767)
chr6 (321-466)||(18001146-18001290)
chr6 (366-463)||(23958867-23958964)
chr6 (367-463)||(16192747-16192843)
chr6 (450-514)||(32034340-32034404)
chr6 (363-430)||(23986013-23986080)
chr6 (375-465)||(31768739-31768829)
chr6 (326-462)||(13404632-13404768)
chr6 (389-465)||(31146373-31146449)
chr6 (383-465)||(13388705-13388787)
chr6 (421-512)||(30258263-30258356)
chr6 (334-465)||(2050974-2051104)
chr6 (416-512)||(6204854-6204954)
chr6 (416-512)||(11691821-11691921)
chr6 (323-460)||(32643523-32643660)
chr6 (374-430)||(7537183-7537239)
chr6 (386-473)||(22305104-22305192)
chr6 (448-514)||(17596764-17596833)
chr6 (326-444)||(29286166-29286284)
chr6 (470-507)||(26855976-26856013)
chr6 (389-465)||(8193206-8193282)
chr6 (389-465)||(28362728-28362804)
chr6 (321-380)||(32026037-32026096)
chr6 (321-395)||(2405438-2405512)
chr6 (366-419)||(6320532-6320585)
chr6 (424-465)||(11157771-11157812)
chr6 (421-465)||(11840247-11840291)
[»] chr4 (50 HSPs)
chr4 (323-514)||(958542-958732)
chr4 (323-514)||(44561278-44561469)
chr4 (364-514)||(56138222-56138377)
chr4 (323-496)||(29700268-29700441)
chr4 (450-514)||(34530743-34530807)
chr4 (450-514)||(39588127-39588191)
chr4 (450-514)||(51429277-51429341)
chr4 (324-462)||(37959720-37959858)
chr4 (450-514)||(34154376-34154440)
chr4 (450-514)||(56304911-56304975)
chr4 (323-430)||(4768612-4768719)
chr4 (323-462)||(51426471-51426610)
chr4 (450-512)||(6283417-6283479)
chr4 (386-510)||(1041932-1042056)
chr4 (322-442)||(21472504-21472624)
chr4 (450-514)||(42885510-42885576)
chr4 (320-458)||(38464770-38464907)
chr4 (451-500)||(4786296-4786345)
chr4 (421-512)||(28081490-28081582)
chr4 (386-512)||(55793916-55794047)
chr4 (319-465)||(4979914-4980060)
chr4 (364-466)||(9889969-9890071)
chr4 (364-462)||(11494519-11494616)
chr4 (317-443)||(49572919-49573045)
chr4 (450-511)||(243296-243357)
chr4 (383-465)||(15999796-15999878)
chr4 (416-512)||(6178056-6178156)
chr4 (416-512)||(49094111-49094211)
chr4 (416-507)||(41795307-41795402)
chr4 (323-462)||(955726-955865)
chr4 (386-512)||(21017951-21018081)
chr4 (323-430)||(34154434-34154541)
chr4 (364-442)||(1044539-1044617)
chr4 (383-465)||(15995716-15995798)
chr4 (383-465)||(18884501-18884583)
chr4 (383-465)||(19069181-19069263)
chr4 (382-430)||(17139618-17139665)
chr4 (363-463)||(21470877-21470977)
chr4 (374-465)||(16984158-16984249)
chr4 (391-430)||(24417448-24417487)
chr4 (326-465)||(44051089-44051228)
chr4 (386-465)||(48806482-48806561)
chr4 (374-441)||(50274745-50274812)
chr4 (363-445)||(18578623-18578705)
chr4 (364-430)||(37394223-37394289)
chr4 (450-479)||(37865203-37865232)
chr4 (406-463)||(48256567-48256624)
chr4 (374-458)||(6280842-6280926)
chr4 (471-507)||(11287557-11287593)
chr4 (388-464)||(41023385-41023461)
[»] chr7 (37 HSPs)
chr7 (326-512)||(30355189-30355375)
chr7 (326-514)||(46863292-46863480)
chr7 (326-514)||(41047715-41047902)
chr7 (326-511)||(28980123-28980309)
chr7 (326-514)||(42681931-42682119)
chr7 (421-514)||(40587693-40587786)
chr7 (450-514)||(21188374-21188438)
chr7 (323-464)||(9494804-9494945)
chr7 (434-514)||(17838695-17838776)
chr7 (434-514)||(36394886-36394966)
chr7 (320-459)||(36392056-36392195)
chr7 (318-464)||(37340231-37340377)
chr7 (450-514)||(34139932-34139996)
chr7 (359-430)||(45361619-45361690)
chr7 (455-514)||(45364168-45364227)
chr7 (326-463)||(47060864-47061000)
chr7 (321-403)||(10225902-10225985)
chr7 (363-430)||(46860485-46860552)
chr7 (449-514)||(28115480-28115545)
chr7 (449-510)||(43686859-43686920)
chr7 (364-465)||(47776307-47776408)
chr7 (458-514)||(48269710-48269766)
chr7 (326-430)||(48314611-48314714)
chr7 (318-465)||(19044223-19044369)
chr7 (318-465)||(20710267-20710413)
chr7 (321-443)||(10705180-10705302)
chr7 (359-441)||(27453615-27453697)
chr7 (326-443)||(41049208-41049324)
chr7 (416-512)||(9367670-9367770)
chr7 (363-407)||(42684218-42684262)
chr7 (326-441)||(34622436-34622551)
chr7 (323-444)||(36186491-36186611)
chr7 (366-407)||(40590546-40590587)
chr7 (326-399)||(48269618-48269690)
chr7 (331-399)||(10708333-10708401)
chr7 (421-465)||(20353927-20353971)
chr7 (476-512)||(48316259-48316295)
[»] chr1 (60 HSPs)
chr1 (326-514)||(13972001-13972187)
chr1 (323-463)||(29261349-29261488)
chr1 (383-514)||(42572705-42572836)
chr1 (449-514)||(29763167-29763232)
chr1 (450-514)||(27487614-27487678)
chr1 (436-514)||(6434795-6434873)
chr1 (326-512)||(49927451-49927649)
chr1 (450-514)||(14174859-14174923)
chr1 (326-462)||(46141719-46141855)
chr1 (323-463)||(46973138-46973277)
chr1 (421-514)||(13147528-13147621)
chr1 (318-443)||(13173765-13173889)
chr1 (364-463)||(13178131-13178230)
chr1 (459-514)||(26637204-26637259)
chr1 (323-458)||(41804037-41804172)
chr1 (364-514)||(29709259-29709408)
chr1 (326-462)||(18975120-18975256)
chr1 (323-430)||(19053993-19054100)
chr1 (449-500)||(49395663-49395714)
chr1 (452-514)||(49426750-49426813)
chr1 (386-512)||(19159619-19159750)
chr1 (450-514)||(44596896-44596960)
chr1 (364-459)||(23276111-23276206)
chr1 (323-429)||(35521548-35521654)
chr1 (364-464)||(11183161-11183261)
chr1 (323-463)||(21944379-21944519)
chr1 (324-462)||(26633465-26633600)
chr1 (366-514)||(29434950-29435097)
chr1 (454-514)||(51269003-51269063)
chr1 (323-430)||(36908512-36908619)
chr1 (319-462)||(49924786-49924929)
chr1 (333-443)||(25040095-25040205)
chr1 (386-464)||(35258870-35258948)
chr1 (364-465)||(6562158-6562259)
chr1 (323-459)||(19499115-19499249)
chr1 (462-510)||(4208454-4208502)
chr1 (386-473)||(13636111-13636199)
chr1 (322-462)||(36072303-36072442)
chr1 (320-463)||(36076557-36076699)
chr1 (375-462)||(52802116-52802203)
chr1 (364-430)||(27485034-27485100)
chr1 (459-514)||(36908640-36908699)
chr1 (324-406)||(42570077-42570159)
chr1 (383-465)||(44470008-44470090)
chr1 (386-507)||(24364680-24364801)
chr1 (364-465)||(48751407-48751508)
chr1 (381-465)||(15047274-15047358)
chr1 (374-462)||(29438020-29438108)
chr1 (383-443)||(30910022-30910082)
chr1 (323-465)||(38689866-38690007)
chr1 (476-514)||(41779766-41779804)
chr1 (389-463)||(44336249-44336323)
chr1 (364-462)||(51289960-51290058)
chr1 (384-465)||(3941147-3941228)
chr1 (364-465)||(9711648-9711749)
chr1 (376-465)||(23359346-23359435)
chr1 (383-463)||(6557909-6557989)
chr1 (323-391)||(14172048-14172116)
chr1 (389-465)||(45943723-45943799)
chr1 (388-436)||(51337539-51337587)
[»] scaffold0199 (1 HSPs)
scaffold0199 (416-514)||(12335-12434)
[»] scaffold0192 (2 HSPs)
scaffold0192 (449-514)||(18847-18912)
scaffold0192 (322-417)||(16345-16439)
[»] scaffold0176 (1 HSPs)
scaffold0176 (450-514)||(857-921)
[»] scaffold1379 (1 HSPs)
scaffold1379 (318-465)||(431-578)
[»] scaffold0618 (1 HSPs)
scaffold0618 (363-443)||(3860-3939)
[»] scaffold0092 (1 HSPs)
scaffold0092 (382-465)||(54558-54641)
[»] scaffold0341 (1 HSPs)
scaffold0341 (364-465)||(17348-17449)
[»] scaffold0116 (1 HSPs)
scaffold0116 (377-465)||(15952-16040)
[»] scaffold0101 (1 HSPs)
scaffold0101 (386-506)||(36486-36611)
[»] scaffold0388 (1 HSPs)
scaffold0388 (323-430)||(11742-11849)
[»] scaffold0219 (2 HSPs)
scaffold0219 (390-440)||(15704-15754)
scaffold0219 (389-465)||(20109-20185)
[»] scaffold0012 (1 HSPs)
scaffold0012 (383-441)||(232542-232600)
[»] scaffold0494 (1 HSPs)
scaffold0494 (364-465)||(806-907)
[»] scaffold0361 (1 HSPs)
scaffold0361 (364-465)||(4397-4498)
[»] scaffold0201 (1 HSPs)
scaffold0201 (376-465)||(22390-22479)
[»] scaffold0360 (1 HSPs)
scaffold0360 (359-463)||(7303-7407)


Alignment Details
Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 2920901 - 2920735
Alignment:
Q  19 ctatcaggcttgtttgtgtgtgtctatgatttgtaataaagtttgaagggctgaatacaaatgttgtttgaagacatgatttatagggttgtagagaaat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920901 ctatcaggcttgtttgtgtgtgtctatgatttgtaataaagtttgaagggctgaatacaaatgttgtttgaagacatgatttatagggttgtagagaaat 2920802  T
Q  119 catcagtttatttttgctctctttctctgggaattgagtgagtttccttgctgcaatgcacttgggg 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920801 catcagtttatttttgctctctttctctgggaattgagtgagtttccttgctgcaatgcacttgggg 2920735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 220 - 404
Target Start/End: Complemental strand, 2920700 - 2920515
Alignment:
Q  220 acttgatgtgagagattggaattggtcgagggacttatctgttacctttgtgtggaggagggtgatgggaatgactca-tttttcccccactctattaat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  2920700 acttgatgtgagagattggaattggtcgagggacttatctgttacctttgtgtggaggagggtgatgggaatgactcagttttccccccactctattaat 2920601  T
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgag 404  Q
    || |||||||| |||||||||| ||| ||||||  ||||||||||||||||||||| ||||||  |||||| ||||||||| ||||    
T  2920600 ttctgaaaattcttgttgacacatttaataagattgatgtacataagtaaaatatgattttgcaacctcggtagttaactgccgag 2920515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 363 - 514
Target Start/End: Original strand, 24512141 - 24512292
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| |||||| | |||||| ||||||||||| ||| |||| ||||||| | |||||||||  | |||  ||||| ||  ||||||||||||||    
T  24512141 aagtaaaatacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctgcagttaattgccgaaaaaaacctcggtagttaactgccga 24512240  T
Q  463 ggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24512241 ggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 24512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 364 - 512
Target Start/End: Complemental strand, 41500332 - 41500184
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||||| |||||||||||||||| || |  |||| |||| |||| |||||||||| | |||| ||||| ||  |||||||||||||||    
T  41500332 agtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgag 41500233  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  41500232 gatcttctgctacaaatctggcataagctctctcatccattattcatct 41500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 323 - 458
Target Start/End: Original strand, 2917617 - 2917752
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || | ||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |     
T  2917617 gaaaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggcta 2917716  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||||||| | |||||||||| ||| ||||||||||    
T  2917717 cagttaactgccgaggaaaacctcagtagttaactg 2917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 390 - 514
Target Start/End: Original strand, 43491110 - 43491234
Alignment:
Q  390 cagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaa 489  Q
    |||||||||| |||| |||| || |||||| |||| ||||| |||||||||||| |   ||||||||||||||| |||||||| || |||||||| ||||    
T  43491110 cagttaactgccgaggaatttaataaccggctgcaattaactgtcgaggaaaaccttggtagttaactgccgagaatcttctgttataaatctggcagaa 43491209  T
Q  490 gctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||    
T  43491210 gctctctcatccattattcatctca 43491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 2920529 - 2920464
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2920529 tagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 2920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 417 - 514
Target Start/End: Original strand, 39393065 - 39393162
Alignment:
Q  417 cggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||| ||||||| |||||| ||||| ||  |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  39393065 cggatgtagttaactgtcgagaaaaacctcggtagttaactgtcgaggatcttctactacaaatctgatagaagctctctcatccattattcatctca 39393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 322 - 463
Target Start/End: Original strand, 45475373 - 45475514
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    ||||||||| ||||||||| ||||||||| | ||   ||| |||||||||| | |||||| ||||||||||||||||| ||||||||| ||||||||| |    
T  45475373 tgaaaattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggct 45475472  T
Q  422 gcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
     |||||||| | |||||||||| ||  ||||||||| |||||    
T  45475473 acagttaactgccgaggaaaacctcggtagttaacttccgag 45475514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 451 - 514
Target Start/End: Complemental strand, 40679608 - 40679545
Alignment:
Q  451 gttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  40679608 gttaactgccgaggatcttctgctacaaatctggaagaacctctctcatccattattcatctca 40679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 2648092 - 2648242
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||| |   |||| ||||||  ||||||| |||| || ||| | ||| ||||||| | |||||||||  ||  ||||||| ||||||     
T  2648092 agtaaaatacgttttttccgtctcgacagttacttgtcgaggaattcaataactgtatgtagttaactgccgaggaaaatctcggtagttaattgccgat 2648191  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  2648192 gatcttctgctacaaatctggcagaaactctctcatcaattattcatctca 2648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 386 - 514
Target Start/End: Original strand, 34638138 - 34638262
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggt 485  Q
    |||||||||||||| |||| ||||  |||  ||| | |||||||| | |||||||||| ||  ||||||| || ||||||||||||||||||||||   |    
T  34638138 tcggcagttaactgccgaggaattagaaattcggtt-cagttaactgccgaggaaaacttcggtagttaattgtcgaggatcttctgctacaaatc---t 34638233  T
Q  486 agaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||||||    
T  34638234 agaagctctctcatccattattcatctca 34638262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 19187322 - 19187222
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||| |||| || | |||||||| | | |||||||||| ||  ||||||||||||||    
T  19187322 aagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaaaatccagttgcagttacctgccgaggaaaacctcggtagttaactgccga 19187223  T
Q  463 g 463  Q
    |    
T  19187222 g 19187222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 414 - 508
Target Start/End: Complemental strand, 10365840 - 10365746
Alignment:
Q  414 aaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattc 508  Q
    |||||| || ||||||| | |||||||||| |   ||||||| ||||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  10365840 aaccggctgtagttaactgccgaggaaaaccttggtagttaaatgccgaggatcttttgctacaaatctggcataagctctctcatccattattc 10365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 29093840 - 29093779
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||   |||||||||||||    
T  29093840 agttaactgccgaggatcttctgctacaaatctggcagaagctctctca---attattcatctca 29093779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 465
Target Start/End: Original strand, 34918426 - 34918528
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| |||| |||||||| |||||| ||||||||| | ||| |||||||||||||| || | ||||| ||||||||||||||  |||||||||||| ||    
T  34918426 aagtacaatacgtttttgccccctcgtcagttaactattgagtaattgaaaaaccggctgtaattaactgtcgaggaaaacattgatagttaactgctga 34918525  T
Q  463 gga 465  Q
    |||    
T  34918526 gga 34918528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 25184927 - 25184827
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||||| ||||| |||||||||||||||| ||||   ||||||| |||||||||| | |||||||||| ||  |||||||||||||||    
T  25184927 agtaaaatacgtttttgccccctcagcagttaactgtcgaggaatt-tgaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 25184829  T
Q  464 ga 465  Q
    ||    
T  25184828 ga 25184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 322 - 463
Target Start/End: Complemental strand, 34921898 - 34921758
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    ||||||||| | ||||||| ||||||||| | ||   |||  ||||||||| |||||||| ||| ||| ||||||||| ||||||||| ||||||||| |    
T  34921898 tgaaaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttgccccc-cggtagttaactgccgagaaattcaaaaaccggct 34921800  T
Q  422 gcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |  ||||||||| ||  |||||||||||||||    
T  34921799 gcagttaactgctgaggaaaacctcggtagttaactgccgag 34921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 462
Target Start/End: Complemental strand, 8268887 - 8268749
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgc 423  Q
    ||||||||||||||||| ||| ||||||| || |||||| ||||||||| | |||||  ||||||||||||||||||  || |||  ||||| ||| |||    
T  8268887 aaaattgttgttgacacattttataagactgacgtacattagtaaaatacgattttgtcccctcggcagttaactgttaaggaatgcaaaaatcggctgc 8268788  T
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    | |||||  ||||| ||||| ||   |||||||||||||    
T  8268787 aattaactatcgagaaaaacctcggcagttaactgccga 8268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 462
Target Start/End: Complemental strand, 35493439 - 35493341
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| | |||||| ||||||| ||||||||| |||| |||| ||||||| | |||||||||| | ||||||||| |||  ||||||||||||||    
T  35493439 agtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagctgcagttaactgccgaggaaaatatcggtagttaactgccga 35493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 82359 - 82259
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| ||||||| | |||||| |||||||||||||| ||||  ||| |||| |||||||||| |||||||||||| ||  ||||||||||| |||    
T  82359 agtaaaatacgtttttgtttcctcggtagttaactgtcgagtaatttgaaa-ccggctgcagttaactgtcgaggaaaacctccgtagttaactgctgag 82261  T
Q  464 ga 465  Q
    ||    
T  82260 ga 82259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 12908505 - 12908428
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||||||||||||||||||| |||||  || |||||||||| | |||||||||| |  ||||||||||||||||    
T  12908505 tcggcagttaactgtcgagaaattcaaaaattggctgcagttaactgccgaggaaaaccttgatagttaactgccgag 12908428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 443
Target Start/End: Complemental strand, 23409640 - 23409520
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||| |||||||| |||||| | |||| |||  ||||||||| |  ||||| | |||||||||||| || |||| |||| |||||| || ||    
T  23409640 gaaaattgttgtggacacgttacataaggctgatgcacactagtaaaatacgcgtttgccctctcggcagttaattgccgaggaattcaaaaactggctg 23409541  T
Q  423 cagttaacagtcgaggaaaac 443  Q
    |||||||| | ||||||||||    
T  23409540 cagttaactgccgaggaaaac 23409520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 34639401 - 34639313
Alignment:
Q  375 tttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||| |||||||||| |||||| ||||||||| |||| |||| |||||||||| |  ||||||||||||   ||||||||||||||    
T  34639401 tttttgccccctcggcaggtaactgccgagaaattaaaaatccggctgcagttaactgctgaggaaaacatcgggagttaactgccgag 34639313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 45479933 - 45479841
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaa 415  Q
    |||||||||||||||||| ||||||||| |  |   |||| ||||||||| | |||||||| ||||||||||||||| ||||||||| |||||    
T  45479933 gaaaattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcagttaactgccgagaaattaaaaaa 45479841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 443
Target Start/End: Original strand, 1149447 - 1149526
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    ||||||||| | |||||||||||||||||||||||| |||| ||||  ||| |||  |||||||||| ||||||||||||    
T  1149447 agtaaaatacgattttgctccctcggcagttaactgccgaggaatttgaaatccgattgcagttaactgtcgaggaaaac 1149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 514
Target Start/End: Original strand, 26858175 - 26858238
Alignment:
Q  451 gttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||||||| ||  ||||  ||||||||| |||||||||||||    
T  26858175 gttaactgccgaggatcttctgctacaaatgtgacagaaattctctcatcaattattcatctca 26858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 465
Target Start/End: Original strand, 43943666 - 43943765
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| | |||| | ||||| |||||||||| ||||| |||| || |||||| |||||||||| |||||||||||  ||  |||||||||||||||||    
T  43943666 taaaatacgatttttccccctcagcagttaactctcgaggaatttaataaccggctgcagttaactgtcgaggaaaaactcggtagttaactgccgagga 43943765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 444
Target Start/End: Original strand, 41181374 - 41181492
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||| ||||||||| || |||||| | || | |||  ||||||||| |||||||| ||||||||||||||||| |||| |||| || |||||| | ||     
T  41181374 aattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggctacat 41181473  T
Q  426 ttaacagtcgaggaaaaca 444  Q
    ||||| | |||||||||||    
T  41181474 ttaactgccgaggaaaaca 41181492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 514
Target Start/End: Original strand, 16580559 - 16580611
Alignment:
Q  462 aggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  16580559 aggattttctgctacaaatctggcaaaagttctctcatccattattcatctca 16580611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 17424128 - 17424216
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgc 473  Q
    |||||||||||||| ||| |  ||| |||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||||||||||    
T  17424128 tcggcagttaactgccgaaattttggaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgc 17424216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 12905543 - 12905590
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  12905543 ccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaac 12905590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 441
Target Start/End: Original strand, 28342460 - 28342575
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| |  |   ||||||||||  || |||||||| || ||||||||||||||||||  |||| ||||||||| ||||     
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaa 28342559  T
Q  426 ttaacagtcgaggaaa 441  Q
    ||||| | ||||||||    
T  28342560 ttaactgccgaggaaa 28342575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 1101150 - 1101072
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaa 442  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||  ||| |||| || ||||||| | |||||||||    
T  1101150 agtaaaatatgattttgctccctcggcagttaactgccgatgaatttgaaatccggctgtagttaactgccgaggaaaa 1101072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 3795331 - 3795413
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||||||||||| ||||  ||| |||| |||||||||| | |||||||||| |    ||||||||||||||||    
T  3795331 ccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaaccttggaagttaactgccgagga 3795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 40156393 - 40156475
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||| ||||||| || ||| |  |||||||||||| |||||||||| | |||||||||| || | ||||||||||||||||    
T  40156393 ccctcgacagttaattgccgaaattttgaaaaaccggctgcagttaactgacgaggaaaacttcgacagttaactgccgagga 40156475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 19186683 - 19186788
Alignment:
Q  325 aaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgca 424  Q
    |||||||||||||||| | ||||||| | ||   ||| |||||||||| |||||| | || |||||||| ||||| |||| |||| ||||| ||| ||||    
T  19186683 aaattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgca 19186782  T
Q  425 gttaac 430  Q
    ||||||    
T  19186783 gttaac 19186788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 43982226 - 43982326
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||| ||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  43982226 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattattgatc 43982325  T
Q  512 t 512  Q
    |    
T  43982326 t 43982326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 24601636 - 24601715
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||| |||||||||||||| |||| |||||| || ||||||||||   |||||||| | ||  |||||||||||||||||    
T  24601636 tcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgagga 24601715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 24612478 - 24612399
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||| |||||||||||||| |||| |||||| || ||||||||||   |||||||| | ||  |||||||||||||||||    
T  24612478 tcggtagttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccgagga 24612399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 465
Target Start/End: Complemental strand, 29407967 - 29407884
Alignment:
Q  382 tccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||||||||||| |  || || |||||| ||||||||||   |||||||||| ||   ||||||||||||||||    
T  29407967 tccctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactaacgaggaaaacttcggcagttaactgccgagga 29407884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 440
Target Start/End: Complemental strand, 41053756 - 41053690
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaa 440  Q
    ||||||||  ||||| |||||||||||| ||||||| | ||||||| |||||||||| | |||||||    
T  41053756 gtttttgcctcctcgacagttaactgtccagaaattaagaaaccggctgcagttaactggcgaggaa 41053690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 462
Target Start/End: Complemental strand, 45137531 - 45137433
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| | ||||||  ||| ||||||||| || |||| |||| ||||  ||| |||||||||| | ||| |||||| || |||||||||||||||    
T  45137531 agtaaaatacgattttgcctccttggcagttaattgccgaggaattaaaaattcggctgcagttaactgccgatgaaaacttcgatagttaactgccga 45137433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 444
Target Start/End: Original strand, 2648776 - 2648853
Alignment:
Q  367 aaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaaca 444  Q
    |||||| | |||||| | ||||||||||||||| | || |||| ||||||||| ||||||||||   |||||||||||    
T  2648776 aaaatacgcttttgccctctcggcagttaactgccaaggaattcaaaaaccggctgcagttaactaccgaggaaaaca 2648853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 27276472 - 27276371
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | |||||||||||||||||  ||| ||||  ||| |||| |||||||||| | |||||||||| ||   |||||| |||||||    
T  27276472 agtaaaatacgattttaccccctcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaattgccgag 27276373  T
Q  464 ga 465  Q
    ||    
T  27276372 ga 27276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 419
Target Start/End: Original strand, 23786094 - 23786154
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    |||| ||||||||||| |||||  ||||||||||||||||| |||| |||| |||| ||||    
T  23786094 acattagtaaaatatgattttgtcccctcggcagttaactgccgaggaattaaaaatccgg 23786154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 36255788 - 36255732
Alignment:
Q  387 cggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    |||||||||||||||||| |||| ||||  ||| |||||||||| | ||||||||||    
T  36255788 cggcagttaactgtcgaggaattaaaaacacggttgcagttaactgccgaggaaaac 36255732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 465
Target Start/End: Complemental strand, 41053617 - 41053565
Alignment:
Q  413 aaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| |||||||||| | |||||||| ||||  |||||||||||||||||    
T  41053617 aaaccggctgcagttaactggcgaggaaatcatcggtagttaactgccgagga 41053565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 43493356 - 43493320
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactg 399  Q
    |||||||||| |||||||| |||||||||||||||||    
T  43493356 aagtaaaatacgtttttgccccctcggcagttaactg 43493320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 18307229 - 18307379
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||| ||||| ||| || ||||||| | |||||||||| ||  |||||||||||||||    
T  18307229 agtaaaatacgtttttgctccttcggcagttaactgtcgaggaattaaaaaatcggctgtagttaactgccgaggaaaacctcggtagttaactgccgag 18307328  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  18307329 gatcttctgctacaaatctggcagaagccctctcatccattattcatctca 18307379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 320 - 500
Target Start/End: Original strand, 20192284 - 20192464
Alignment:
Q  320 tttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    ||||| ||||||||||||||| ||||||||| | || | ||| |||||||||| | |||||| || ||| ||||||||||  ||  |||| || || |||    
T  20192284 tttgagaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaattcaataatcgg 20192383  T
Q  420 atgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatc 500  Q
     |||||||||| | |||||||||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  20192384 ctgcagttaactgccgaggaaaacttcgatagttaaatgccgaggatcttctgctacaaatctggcagaagctctctcatc 20192464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 514
Target Start/End: Original strand, 3600273 - 3600462
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaa-aaccggatgca 424  Q
    ||||||||||||||| ||||||||    ||   ||| ||||||||||||||||||| ||||||||||||||||| |||  ||||  || |||| | ||||    
T  3600273 aattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaataattataataaccagctgca 3600372  T
Q  425 gttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||| | | |||||||| || ||||||||| ||||||||||||||||||||||||||  ||||| ||| |||| ||||||||||||||    
T  3600373 gttaactgccaaggaaaacctcgatagttaacagccgaggatcttctgctacaaatctgacagaagttctttcatgcattattcatctca 3600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 386 - 514
Target Start/End: Complemental strand, 542866 - 542738
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggt 485  Q
    ||||||||||||||||||| ||||  ||| |||| ||||| |||| | ||||||||   ||  ||||||||||||||||||||||||||||||||||||     
T  542866 tcggcagttaactgtcgaggaattagaaatccggctgcagctaactgccgaggaaactctcggtagttaactgccgaggatcttctgctacaaatctggc 542767  T
Q  486 agaagctctctcatccattattcatctca 514  Q
    ||||| |||||||||||||||||||||||    
T  542766 agaagttctctcatccattattcatctca 542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 323 - 463
Target Start/End: Complemental strand, 18538474 - 18538334
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| |||||| || | || | ||| |||||||||| | |||||| |||||||||||||| ||||||| |||| ||||||||| ||    
T  18538474 gaaaattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctg 18538375  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||| | |||||||||| ||  |||||||||||||||    
T  18538374 cagttaactgccgaggaaaacttcggtagttaactgccgag 18538334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 398 - 514
Target Start/End: Original strand, 25497520 - 25497636
Alignment:
Q  398 tgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctc 497  Q
    ||||||| |||| |||||  || |||||||||| | |||||||||  ||  ||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  25497520 tgtcgaggaattcaaaaattggctgcagttaactgccgaggaaaatctcggtagttaactgccgagaatcttctgctacaaatcaggcagaagctctctc 25497619  T
Q  498 atccattattcatctca 514  Q
    |||||||||||||||||    
T  25497620 atccattattcatctca 25497636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 323 - 443
Target Start/End: Original strand, 34682191 - 34682311
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || || || |||||||||| | ||||||||||| | ||||||||||||||| |||| ||||||||| ||    
T  34682191 gaaaattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctg 34682290  T
Q  423 cagttaacagtcgaggaaaac 443  Q
    |||||||| | ||||||||||    
T  34682291 cagttaactgccgaggaaaac 34682311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 462
Target Start/End: Complemental strand, 3603290 - 3603148
Alignment:
Q  320 tttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    ||||| ||||||||||||||| || |||||| | || | |||||||||||||| ||||||||||||||| |||||||||| |||  |||| || ||| ||    
T  3603290 tttgagaattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaattcaataactgg 3603191  T
Q  420 atgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
     ||||||||||   |||||||||| ||  ||||||||||||||    
T  3603190 ctgcagttaacttccgaggaaaacctcggtagttaactgccga 3603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 421 - 514
Target Start/End: Original strand, 11346039 - 11346133
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||||||||| | |||||||||| ||  |||||||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  11346039 tgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 11346133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 450 - 512
Target Start/End: Complemental strand, 42865816 - 42865754
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42865816 agttaattgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 42865754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 462
Target Start/End: Complemental strand, 20200284 - 20200148
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | || | ||| || ||||||| |||||||| || |||||||||||||||| ||||||| || ||||   |||||    
T  20200284 aattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcagttaactgtcaagaaattcaataaccaactgcag 20200185  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| | |||||||||||||  ||||||||||||||    
T  20200184 ttaactgccgaggaaaacatctgtagttaactgccga 20200148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 35564321 - 35564386
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||| ||||    
T  35564321 tagttaactgctgaggatcttctgctacaaatctggcataagctctctcatccattattcacctca 35564386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 364 - 464
Target Start/End: Complemental strand, 34124033 - 34123933
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||  ||| |||| |||||||||| | | |||||||| ||  |||||||||||||||    
T  34124033 agtaaaatacgattttgccccctcggcagttaactgtcgagaaatttgaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgag 34123934  T
Q  464 g 464  Q
    |    
T  34123933 g 34123933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 464
Target Start/End: Original strand, 38968065 - 38968170
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||||||||||||| ||||||| ||| |||| ||||||||  |||| |||  |||| |||| |||||||||| | |||||||||| || |||||||||||    
T  38968065 acataagtaaaatacgtttttgatccttcggtagttaactaccgaggaataaaaaatccggctgcagttaactgccgaggaaaacctcgatagttaactg 38968164  T
Q  459 ccgagg 464  Q
    ||||||    
T  38968165 ccgagg 38968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 462
Target Start/End: Complemental strand, 25500030 - 25499887
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgt--acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||||||| ||||||||| || |||||| | || |   ||| |||||||||| | |||||| |||||||||||||||| ||||| |||| ||||||||    
T  25500030 ttgaaaattggtgttgacacattacataaggctgaggcgaacacaagtaaaatacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccg 25499931  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    | ||| |||||| | |||||||||| | | ||||||| ||||||    
T  25499930 gttgcggttaactgccgaggaaaaccttagtagttaagtgccga 25499887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 458
Target Start/End: Original strand, 1398534 - 1398673
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||||||||||||||||||| || ||||||   ||   ||| ||||||||||   ||||||||| ||| |||||||||| |||| |||| || |||||    
T  1398534 ttttgaaaattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttgctccttcgacagttaactgccgaggaattcaataaccg 1398633  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    | |||||||||||| | |||||||| ||  ||||||||||    
T  1398634 gttgcagttaacagccaaggaaaacctcggtagttaactg 1398673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 35567166 - 35567059
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    ||||||||  |||||||| |||||| || | || | ||| ||||||||||||||||||||| |||||||||||||||||||| |||   || ||||| ||    
T  35567166 gaaaattgccgttgacacatttcatcaggctgaggcacacaagtaaaatatgtttttgctctctcggcagttaactgtcgaggaatgttaataccggttg 35567067  T
Q  423 cagttaac 430  Q
    ||||||||    
T  35567066 cagttaac 35567059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 8537225 - 8537291
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||||||||||||||||| ||||||||||||||||  |||| || ||||||||||||||||||||||    
T  8537225 tagttaactgccgaggatgttctgctacaaatctgccagaatctcctctcatccattattcatctca 8537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 430
Target Start/End: Complemental strand, 18310157 - 18310053
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | || | ||| |||||||||| ||||||||  |||| |||||||||||||||| |||| || |||||  |||||    
T  18310157 aattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaattcaataaccgactgcag 18310058  T
Q  426 ttaac 430  Q
    |||||    
T  18310057 ttaac 18310053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 430
Target Start/End: Complemental strand, 19228786 - 19228678
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    ||||||||||||||||||| ||| ||||| | ||   ||| |||||||||| ||   ||| ||||||||||||||||| |||  |||| |||||||||||    
T  19228786 tgaaaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggat 19228687  T
Q  422 gcagttaac 430  Q
    |||||||||    
T  19228686 gcagttaac 19228678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 463
Target Start/End: Original strand, 33993255 - 33993354
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||||| ||||||| ||||||||| ||| ||||| ||||||||| || ||||||| | || | ||||| ||  |||||||||||||||    
T  33993255 agtaaaatacgtttttgccccctcggaagttaactgccgaaaaattcaaaaaccggctgtagttaactgccgtgaaaaacctcggtagttaactgccgag 33993354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 33995227 - 33995145
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||| |||||||||| ||||||||| ||||| |||||||| ||||| | |||||||||| ||   ||||||||||||||||    
T  33995227 ccctcgacagttaactgccgagaaattcaaaaatcggatgcaattaactgccgaggaaaacctcgggagttaactgccgagga 33995145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 34122494 - 34122600
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||| ||||||||| | |||||| || |||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||  ||  ||||||||||    
T  34122494 acattagtaaaatacgattttgccccttcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaagctcggtagttaactg 34122593  T
Q  459 ccgagga 465  Q
    |||||||    
T  34122594 ccgagga 34122600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 19037516 - 19037416
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  19037516 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatc 19037417  T
Q  512 t 512  Q
    |    
T  19037416 t 19037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 24053114 - 24053235
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| | | |||||  |||   |||||| ||||||| ||||||| || |||||||||||| || |||| |||| ||||||||  ||    
T  24053114 gaaaattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagttaaatgccgagtaattcaaaaaccgtctg 24053213  T
Q  423 cagttaacagtcgaggaaaaca 444  Q
    |||||||| | |||| ||||||    
T  24053214 cagttaactgccgagaaaaaca 24053235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 30354465 - 30354400
Alignment:
Q  393 ttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    ||||||||||||||||| |||||| || |||||||||| |||||||||||| ||  ||||||||||    
T  30354465 ttaactgtcgagaaattcaaaaactggttgcagttaactgtcgaggaaaacctcggtagttaactg 30354400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 357 - 464
Target Start/End: Complemental strand, 8702303 - 8702196
Alignment:
Q  357 gtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaac 456  Q
    ||||| |||||||||| | ||||||||||||| |||||||||| |||| |||| |||| | |  |||||||||| |  ||||||||| ||  ||||||||    
T  8702303 gtacacaagtaaaatacgattttgctccctcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaacctcggtagttaac 8702204  T
Q  457 tgccgagg 464  Q
    || |||||    
T  8702203 tgacgagg 8702196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 17965843 - 17965925
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||| ||||||| |||| ||||  ||  |||||||||| | |||||||||||||  ||||||| |||||||||    
T  17965843 ccctcggcagttaattgtcgaggaattaaaaattcgactgcagttaactgccgaggaaaacatcggtagttaattgccgagga 17965925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 460
Target Start/End: Complemental strand, 42539509 - 42539375
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||| ||||||||| |||  | |||| |||  |||| ||||||||| |||||||| || | || || |||||||||||||||| ||||  ||| |||||    
T  42539509 aattgatgttgacacatttggttagactgatacacatgagtaaaatacgtttttgccccttaggtagctaactgtcgagaaattaaaaattcggctgcag 42539410  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgcc 460  Q
    ||||| | |||||||||| |   ||||||||||||    
T  42539409 ttaactgccgaggaaaactttggtagttaactgcc 42539375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 17966984 - 17966883
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| ||||||||| |||| |||  ||||||||||   |||||||||  ||  ||||||||||| |||    
T  17966984 agtaaaatacgattttaccccctcggcagttaactgccgagaaattaaaaatccgactgcagttaactaccgaggaaaatctcggtagttaactgctgag 17966885  T
Q  464 ga 465  Q
    ||    
T  17966884 ga 17966883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 41798793 - 41798894
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||||| |||||| |||||||||||||||||  ||  ||||  ||| |||| |||||||||| | ||| |||||| ||  |||||| ||||||||    
T  41798793 agtaaaatatgattttgccccctcggcagttaactgctgaagaatttgaaatccggctgcagttaactgccgaagaaaacctcggtagttatctgccgag 41798892  T
Q  464 ga 465  Q
    ||    
T  41798893 ga 41798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 42865876 - 42865811
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaa 429  Q
    ||||||||| |||||| ||||||||||||||||| | |||  |||| ||||||||| |||||||||    
T  42865876 agtaaaataagttttttctccctcggcagttaaccgacgaagaattcaaaaaccggttgcagttaa 42865811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 1401428 - 1401388
Alignment:
Q  474 tacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  1401428 tacaaatctagcagaagctctctcatccattattcatctca 1401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 30708899 - 30709030
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttct--gctac-aaatc 481  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | ||||| |||| ||   |||||||||||||||||||| |  ||||| |||||    
T  30708899 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgagggaaacctcgggagttaactgccgaggatcttatgcgctacaaaatc 30708998  T
Q  482 tggtagaagct-ctctcatccattattcatct 512  Q
    ||| |||| || ||||||||||||||| ||||    
T  30708999 tggcagaatctcctctcatccattattgatct 30709030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 8088 - 7994
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgc--tacaaatctggtagaagctc-tctcatccattattcatct 512  Q
    |||||||||| | |||||||||  ||  ||||||||| |||||||||| ||||  ||||||||||| |||| ||| || ||||||||||||||||    
T  8088 tgcagttaactgccgaggaaaatctcggtagttaactaccgaggatctcctgcgctacaaatctggcagaatctcctcacatccattattcatct 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 30192489 - 30192568
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||| ||| |  || || |||||| |||||||||| |||||||||||| ||   ||||||||||||||||    
T  30192489 tcggcagttaactgccgaaattttaaagaaccggctgcagttaactgtcgaggaaaacttcggcagttaactgccgagga 30192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 376 - 462
Target Start/End: Complemental strand, 28388605 - 28388519
Alignment:
Q  376 ttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||| ||||||||||||| ||| |||| ||||  ||| || | |||||||||| | |||||||||| ||  ||||||||||||||    
T  28388605 ttttgccccctcggcagttagctgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaactgccga 28388519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 7762285 - 7762241
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||| |||||||||||| |||  ||||||||||||||||    
T  7762285 tgcagttaactgtcgaggaaaacctcaggagttaactgccgagga 7762241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 506
Target Start/End: Original strand, 28880316 - 28880443
Alignment:
Q  384 cctcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaa 479  Q
    |||||||||||||||| ||| |  |||||||| |||| |||||  ||| | |||||||||| ||  || |||||||||||||||||| ||  |||| |||    
T  28880316 cctcggcagttaactgccgaaattttgaaaaatccggctgcagcaaactgccgaggaaaacctcggtaattaactgccgaggatcttatgccctacaaaa 28880415  T
Q  480 tctggtagaagct-ctctcatccattat 506  Q
    ||||| |||| || ||||||||||||||    
T  28880416 tctggcagaatctcctctcatccattat 28880443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 326 - 514
Target Start/End: Complemental strand, 18441577 - 18441389
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||||||||| | ||   ||| |||||||||| |||||||| ||||||||||||||||| ||||||||| || |||||  || ||    
T  18441577 aattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaataaccgattgtag 18441478  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| | |||| ||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  18441477 ttaactgccgagaaaaacctcggcagttaactgccgaggatcttctgctacaaatctggcagaaactctctcatccattattcatctca 18441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 319 - 512
Target Start/End: Complemental strand, 41858264 - 41858073
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||| ||||||||||||||| ||||||| | | ||   |||  ||||||||| |||||||| ||||||||||||||||| |||  |||| ||||||||    
T  41858264 ttttgagaattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccg 41858165  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    | |||||||||| | |||||||  | ||   ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41858164 gctgcagttaactgccgaggaa--cctcgggagttaactgtcgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 41858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 324 - 512
Target Start/End: Original strand, 42602395 - 42602583
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgc 423  Q
    |||| |||||||||||||||||||| | | ||   |||  |||||||||  |||||| ||  |||||||||||||| |||  |||| |||||||||||||    
T  42602395 aaaaatgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttctatcggcagttaactgccgaagaattcaaaaaccggatgc 42602494  T
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||| | |||||||||| ||  |||||||||||||||||||||||| ||||||||||  | ||| | |||||||||||||||||||    
T  42602495 agttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgatacaaatctgacataagttgtctcatccattattcatct 42602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 424 - 510
Target Start/End: Original strand, 26451515 - 26451601
Alignment:
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcat 510  Q
    ||||||| | |||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  26451515 agttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatctattattcat 26451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 3395927 - 3395991
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  3395927 agttaactgccgaggatcttctgctacaaatatggcagaaactctctcatccattattcatctca 3395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 462
Target Start/End: Original strand, 18438571 - 18438707
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | |||| ||| |||||||||| | |||||| || ||||||||||||||| ||| |||| || |||||| |||||    
T  18438571 aattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcagttaactgttgaggaattcaataaccggctgcag 18438670  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| | |||||||||| ||   |||||||||||||    
T  18438671 ttaactgccgaggaaaacctcgggagttaactgccga 18438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 41274652 - 41274717
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  41274652 tagttaactgccgagaatcttctactataaatctggcagaagctctctcatccattattcatctca 41274717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 22547504 - 22547568
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  22547504 agttaactaccgaggatcttctactacaaatctggcagaagctctctcatcaattattcatctca 22547568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 327 - 463
Target Start/End: Original strand, 41855306 - 41855442
Alignment:
Q  327 attgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagt 426  Q
    |||||||||||||| ||||||| | | ||   |||| ||||||||| ||||||||  ||||||||||||||||||||  |||| ||||| ||| ||||||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagt 41855405  T
Q  427 taacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||| | |||||||||| ||  ||||||||| |||||    
T  41855406 taactgccgaggaaaacctcggtagttaactaccgag 41855442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 443
Target Start/End: Original strand, 7168022 - 7168142
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || | ||| |||||||||| | |||||| |||||| | |||| ||| |||  |||| ||||||||| ||    
T  7168022 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctg 7168121  T
Q  423 cagttaacagtcgaggaaaac 443  Q
    |||||||| | ||||||||||    
T  7168122 cagttaactgccgaggaaaac 7168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 462
Target Start/End: Complemental strand, 42605325 - 42605234
Alignment:
Q  371 tatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| | |||||||||||||||||||||  |||| ||||| ||| |||||||||| | ||| |||||||||  ||||||||||||||    
T  42605325 tatgtttttaccccctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgatgaaaacatcggtagttaactgccga 42605234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 463
Target Start/End: Original strand, 22577601 - 22577739
Alignment:
Q  325 aaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgca 424  Q
    |||| |||||||| || ||||| ||| | |||  ||| || ||||||| ||||||| ||||||||||||||| ||  ||| |||| |||||  || ||||    
T  22577601 aaatcgttgttgatacatttcacaaggcagatacacacaaataaaatacgtttttgttccctcggcagttaattgctgaggaattcaaaaattggttgca 22577700  T
Q  425 gttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||| |||||||||||| ||  |||||||||||||||    
T  22577701 gttaactgtcgaggaaaacctcggtagttaactgccgag 22577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 464
Target Start/End: Original strand, 1114718 - 1114818
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| |||||||||  ||| |||| |||||||||| | |||||||| | ||  |||||||||||||||    
T  1114718 agtaaaatacgattttaccccctcggcagttaactgccgagaaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgag 1114817  T
Q  464 g 464  Q
    |    
T  1114818 g 1114818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 34823093 - 34823014
Alignment:
Q  385 ctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    |||||||||||||||||||| |||| ||||  ||| |||||||||  |||||||||||| ||  ||||||||||||||||    
T  34823093 ctcggcagttaactgtcgaggaattaaaaatacggctgcagttaattgtcgaggaaaacctcggtagttaactgccgagg 34823014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 35962277 - 35962383
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||| ||||||||| | |||||| | |||||||||||||||||||| ||||  ||| |||| | |||||||| | |||||||||| ||   |||||||||    
T  35962277 acattagtaaaatacgattttgccctctcggcagttaactgtcgaggaatttgaaatccggctacagttaactgccgaggaaaacctcgggagttaactg 35962376  T
Q  459 ccgagga 465  Q
    |||||||    
T  35962377 ccgagga 35962383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 500
Target Start/End: Original strand, 38871834 - 38871884
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatc 500  Q
    ||||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  38871834 agttaactgccaaggatcttctgctacaaatctggcaggagctctctcatc 38871884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 3395825 - 3395918
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaa 415  Q
    ||||||||| | ||||||| |||||||||   || | ||| ||||||||||||||||||| ||||| ||||||||||| |||| |||| |||||    
T  3395825 tgaaaattgctcttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaatttaaaaa 3395918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 4866427 - 4866475
Alignment:
Q  382 tccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  4866427 tccctcggcagttaactgtcaagaaattcaaaaaccggctgcagttaac 4866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 463
Target Start/End: Original strand, 18205761 - 18205860
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||| |  ||||||| |||||||| |||  |||| ||||||||| |||||||||| | | |||||||| ||  |||||||||||||||    
T  18205761 agtaaaatacgtttttaccacctcggcggttaactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaacctcggtagttaactgccgag 18205860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 514
Target Start/End: Original strand, 24860448 - 24860507
Alignment:
Q  455 actgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| ||||||||||||||| |||| ||  ||||||||||||||| |||||||||||||    
T  24860448 actgcggaggatcttctgctataaatttgacagaagctctctcatctattattcatctca 24860507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 512
Target Start/End: Original strand, 37779713 - 37779773
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||| ||||||| ||||||||||||||||  |||||  ||||||||||||||||||||    
T  37779713 agttaactgtcgaggatattctgctacaaatctgacagaag--ctctcatccattattcatct 37779773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 21406261 - 21406343
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||| ||||||||||| |||| |||| | ||||||| ||||||||||   |||||||||| ||  |||||||||||||||||    
T  21406261 ccctctgcagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21406343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 21800753 - 21800835
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||| ||||||||||| |||| |||| | ||||||| ||||||||||   |||||||||| ||  |||||||||||||||||    
T  21800753 ccctctgcagttaactgccgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 21800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 443
Target Start/End: Complemental strand, 7172690 - 7172606
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    |||||||||||||| |||||||| || ||  |||||||||| |||||||||  |||||||| |||| ||||| | |||| |||||    
T  7172690 acataagtaaaatacgtttttgccccatcaacagttaactgccgagaaattttaaaaccggctgcaattaactgccgagaaaaac 7172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 28168698 - 28168658
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcga 403  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  28168698 aagtaaaatatgtttttgcctcctcggcagttaactgtcga 28168658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 45454381 - 45454457
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaa 440  Q
    ||||||||| | ||||||  |||||||||||||||| |||| ||||  ||| ||||||||||||||| | |||||||    
T  45454381 agtaaaatacgattttgcctcctcggcagttaactgccgaggaatttgaaatccggatgcagttaactgccgaggaa 45454457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 512
Target Start/End: Complemental strand, 15033160 - 15033095
Alignment:
Q  449 tagttaactgccgaggatcttctg--ctacaaatctggtagaagctc-tctcatccattattcatct 512  Q
    |||||||||||||||||||| |||  |||||||||||| |||| ||| |||||||||||||||||||    
T  15033160 tagttaactgccgaggatct-ctgacctacaaatctggcagaatctcctctcatccattattcatct 15033095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 21835258 - 21835176
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||| |||||||| ||||||| |||| | ||||||| ||||||||||   |||||||||| ||  || ||||||||||||||    
T  21835258 ccctctgcagttaaatgtcgaggaattcataaaccggctgcagttaactaccgaggaaaacttcggtatttaactgccgagga 21835176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 464
Target Start/End: Complemental strand, 40077386 - 40077248
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||| ||||| | ||   |||  ||||||||| |||||||| |||||  | || ||||||| ||  ||| |||| |||  |||||    
T  40077386 aattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcaacggtaaactgtcaaggtattaaaaatccgactgcag 40077287  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    ||||| | |||||||||| ||  ||||||||||||||||    
T  40077286 ttaactgccgaggaaaacctcggtagttaactgccgagg 40077248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 7121863 - 7121783
Alignment:
Q  385 ctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||||| |  || || |||||| |||||||||| |  ||||||||| ||   ||||||||||||||||    
T  7121863 ctcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgctgaggaaaacttcggcagttaactgccgagga 7121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 364 - 512
Target Start/End: Original strand, 41802973 - 41803121
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||||| | ||||||||||||||| |||  |||| ||||||||| |||||||||| | |||||||||| ||  |||||||||||||||    
T  41802973 agtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 41803072  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41803073 gatcttttgctacaaatctggcagaagctctctcatccattattcatct 41803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 34694513 - 34694382
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatct 482  Q
    |||||||||||||||||||||| ||||  ||| |||| |||||| ||| | |||| ||||| ||   |||||||||||||||||||||||||||||||||    
T  34694513 ccctcggcagttaactgtcgaggaattagaaatccggctgcagtaaactgccgagaaaaacctcgggagttaactgccgaggatcttctgctacaaatct 34694414  T
Q  483 ggtagaagctctctcatccattattcatctca 514  Q
    || |||||||||||||||||||||||||||||    
T  34694413 ggcagaagctctctcatccattattcatctca 34694382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 323 - 514
Target Start/End: Complemental strand, 45101987 - 45101796
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||| ||||| |||||||||   || | |||||||||||||| ||||||   |||||||||||||| ||| ||| |||| ||||||||| ||    
T  45101987 gaaaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagttaattgttgaggaattcaaaaaccggctg 45101888  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| | |||||    | |   |||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  45101887 cagttaactgccgaggttttctttggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatatattattcatctca 45101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 364 - 512
Target Start/End: Complemental strand, 51402496 - 51402348
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| ||||||||| |||| |||||||| ||  ||  |||| ||||| ||  || ||||||| |||||||||||| ||  |||||||||||||||    
T  51402496 agtaaaatacgtttttgcttcctcagcagttaattgcagaataattcaaaaatcgattgtagttaactgtcgaggaaaacctcggtagttaactgccgag 51402397  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  51402396 gatcttctgctacaaatctgtcagaagctctctcatccattattcatct 51402348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 376 - 512
Target Start/End: Complemental strand, 55207749 - 55207613
Alignment:
Q  376 ttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgcta 475  Q
    |||||| || |||||||||||||| |||  |||| ||||||||| |||||||||| | | |||| ||| |   |||||||||||||||||||||||||||    
T  55207749 ttttgccccatcggcagttaactgccgaagaattcaaaaaccggttgcagttaactgcctaggacaaccttggtagttaactgccgaggatcttctgcta 55207650  T
Q  476 caaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||| |||||||||||||||||||||||||||    
T  55207649 caaatctggcagaagctctctcatccattattcatct 55207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 13896974 - 13896824
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||||||||||||   ||||||||||||| ||  ||  |||| || ||| || |||||||||| |||||||||||| ||  ||||||||||||||     
T  13896974 agtaaaatatgtttttgactcctcggcagttaattgctgaagaatttaataactggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaa 13896875  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  13896874 gattttctactacaaatctggcagaagctctctcatccattattcatctca 13896824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 318 - 463
Target Start/End: Original strand, 29929355 - 29929500
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    |||| |||||||||||||||||| ||| ||||| | || | ||| |||||||||||| ||||||||||||| ||||||||||| ||| |||| |||||||    
T  29929355 ttttagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaacc 29929454  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    || |||| ||||| | |||||||||| || ||||||||||||||||    
T  29929455 ggctgcaattaactgccgaggaaaacctcgatagttaactgccgag 29929500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 318 - 463
Target Start/End: Original strand, 29978509 - 29978654
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    |||| |||||||||||||||||| ||| ||||| | || | ||| |||||||||||| ||||||||||||| ||||||||||| ||| |||| |||||||    
T  29978509 ttttagaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaacc 29978608  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    || |||| ||||| | |||||||||| || ||||||||||||||||    
T  29978609 ggctgcaattaactgccgaggaaaacctcgatagttaactgccgag 29978654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 326 - 514
Target Start/End: Original strand, 41577012 - 41577200
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||||||||| | ||   | | || ||||||| ||||||||    ||| ||||||||||||||  |||| ||||| ||| |||||    
T  41577012 aattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggttgcag 41577111  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| |||||  ||||| ||  |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||    
T  41577112 ttaactgtcgacaaaaacttcggtagtaaactgccgaggatcttctgctacaaatcttgcagaagctctctcatccattatccatctca 41577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 55385122 - 55385262
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgc 473  Q
    |||||||| ||||||||||||||||| |||    ||  ||| |||| |||||||||| | |||||||||| ||  |||||||||| ||||||||||||||    
T  55385122 gtttttgccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgaggatcttctgc 55385221  T
Q  474 tacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  55385222 tacaaatctggcagaagctctctcatccattattaatctca 55385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 374 - 514
Target Start/End: Original strand, 43476176 - 43476317
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaatt-gaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg 472  Q
    |||||||| ||||||| ||||||||| |||    || ||||| |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||| ||    
T  43476176 gtttttgccccctcggaagttaactgccgaagttttagaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttttg 43476275  T
Q  473 ctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  43476276 ctacaaatctgacagaagctctctcatccattattcatctca 43476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 514
Target Start/End: Complemental strand, 52570661 - 52570514
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| |||||| | ||||||||||||||||| |||  |||| ||||||||  ||||||||||   |||| ||||| ||  |||||||||||||||||    
T  52570661 taaaatacgttttttc-ccctcggcagttaactgccgaagaattcaaaaaccgactgcagttaactaccgagaaaaacctcggtagttaactgccgagga 52570563  T
Q  466 tcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||| |||||||||||| |||| ||||||||| ||||||||||||||    
T  52570562 tcttctactacaaatctggcagaaactctctcattcattattcatctca 52570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 364 - 510
Target Start/End: Original strand, 41137693 - 41137829
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||||||||||||||| || ||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||||          ||| |||||    
T  41137693 agtaaaatatgtttttgctccatcagcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaaca----------actaccgag 41137782  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcat 510  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  41137783 gatcttctgctacaaatctggcagaagctctctcatccattattcat 41137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 324 - 463
Target Start/End: Complemental strand, 28611238 - 28611099
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgc 423  Q
    ||||||||| || |||| ||||||||| | ||   ||| |||||||||||  |||||| ||||||||||||||||| ||||||||| ||||||||| |||    
T  28611238 aaaattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgc 28611139  T
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||| | ||||||||||| |  |||||||||||||||    
T  28611138 agttaactgccgaggaaaacaacggtagttaactgccgag 28611099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 51696587 - 51696522
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  51696587 tagttaactgccgaggatcttctgctgcaaatctggcagaagctctctcatccattattcatctca 51696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 19454363 - 19454299
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  19454363 agttaactgccgaggatcttctactacaaatctggcagaagctctctcatccattattcatctca 19454299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 503
Target Start/End: Complemental strand, 24703460 - 24703374
Alignment:
Q  417 cggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccat 503  Q
    |||||||||||||| | |||||||| | |||  ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24703460 cggatgcagttaactgccgaggaaatcctcaggagttaactgccgatgatcttctgctacaaatctggcagaagctctctcatccat 24703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 384 - 514
Target Start/End: Complemental strand, 49219869 - 49219739
Alignment:
Q  384 cctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctg 483  Q
    |||||| ||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| |   |||||||||  ||||||||||||||||||||| ||    
T  49219869 cctcggtagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaaaccttggtagttaactatcgaggatcttctgctacaaatttg 49219770  T
Q  484 gtagaagctctctcatccattattcatctca 514  Q
      |||||||||| ||||||||||||||||||    
T  49219769 acagaagctctcccatccattattcatctca 49219739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 318 - 463
Target Start/End: Complemental strand, 29918485 - 29918340
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    |||| |||||||||||||||||  ||||||||| | || | |||||||||||||| | |||||  ||||||||| ||||||| |||  ||||  ||||||    
T  29918485 ttttagaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaacc 29918386  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    || |||||||||| | |||||||||| ||  |||||||||||||||    
T  29918385 ggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29918340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 318 - 463
Target Start/End: Complemental strand, 29967638 - 29967493
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    |||| |||||||||||||||||  ||||||||| | || | |||||||||||||| | |||||  ||||||||| ||||||| |||  ||||  ||||||    
T  29967638 ttttagaaaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaacc 29967539  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    || |||||||||| | |||||||||| ||  |||||||||||||||    
T  29967538 ggctgcagttaactgccgaggaaaacctcgttagttaactgccgag 29967493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 321 - 462
Target Start/End: Complemental strand, 41579865 - 41579724
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgga 420  Q
    |||| |||||||||||||||||| |||||| | || | |||||||||||||| | |||| | |||||||||||||| ||  ||| |||| || ||||||     
T  41579865 ttgagaattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggc 41579766  T
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| | |||||||||| ||  ||||||||||||||    
T  41579765 tgcagttaactgccgaggaaaacctcggtagttaactgccga 41579724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 359 - 463
Target Start/End: Original strand, 42756129 - 42756233
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||| ||||||||| |||||||| ||||| |||||||||||||||| |||| |||| |||| |||||||||| | |||||||||| || | |||||||||    
T  42756129 acatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcgagagttaactg 42756228  T
Q  459 ccgag 463  Q
    |||||    
T  42756229 ccgag 42756233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 391 - 511
Target Start/End: Complemental strand, 46347791 - 46347672
Alignment:
Q  391 agttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaag 490  Q
    ||||||||||||| ||||| || || ||| |||||||||| | |||||||||| || ||| ||||||| ||| |||||||||||||||||| || ||||     
T  46347791 agttaactgtcga-aaattcaataatcggctgcagttaactgccgaggaaaacctcgataattaactgtcgaagatcttctgctacaaatcagggagaaa 46347693  T
Q  491 ctctctcatccattattcatc 511  Q
    |||||||||||||| ||||||    
T  46347692 ctctctcatccattgttcatc 46347672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 4004849 - 4004750
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||| |||||||||| | |||||||||| ||  || |||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||||||    
T  4004849 ccggctgcagttaactgccgaggaaaacctcggtacttaactgccgaggatcttctgctacaaacctggcagaatctcctctcatccattattcatctca 4004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 7245155 - 7245217
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctcatccattattcatctca 7245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 421 - 514
Target Start/End: Original strand, 36134355 - 36134449
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||||||||| | |||||||||| ||   ||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||    
T  36134355 tgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgctacaaatctggcagaatctcctcttatccattattcatctca 36134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 514
Target Start/End: Original strand, 49609370 - 49609508
Alignment:
Q  376 ttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgcta 475  Q
    ||||||||| |||  |||||| ||||||| ||||  |||  |||  ||||||||  |||||| ||||| ||  ||||||||||||||||| |||||||||    
T  49609370 ttttgctccttcgatagttaattgtcgaggaatttgaaattcggccgcagttaattgtcgagaaaaacctcggtagttaactgccgaggaacttctgcta 49609469  T
Q  476 caaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||| | ||||||||| || ||||||||||||||    
T  49609470 caaatctggcataagctctcttattcattattcatctca 49609508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 321 - 462
Target Start/End: Complemental strand, 2433084 - 2432943
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgga 420  Q
    |||| ||||||||||||||| || |||||| | || | |||  ||||||||| | ||||   |||||||||||||||||||||| |||| || |||||||    
T  2433084 ttgagaattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaattcaataaccgga 2432985  T
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    | |||||||| |||||||||||| |   ||||||||||||||    
T  2432984 tacagttaactgtcgaggaaaaccttggtagttaactgccga 2432943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 449 - 514
Target Start/End: Original strand, 43568926 - 43568991
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  43568926 tagttaactgctgaggatcttctgttacaaatctgacagaagctctctcatccattattcatctca 43568991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 319 - 459
Target Start/End: Complemental strand, 30256146 - 30256006
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||||||||||||||||||| ||||||||  | || | ||| ||||||||||  |   ||| |||| || ||||||||| |||| |||| ||||||||    
T  30256146 ttttgaaaattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtagttaactgccgaggaattaaaaaaccg 30256047  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgc 459  Q
    | |||||||||| | |||||||||| || ||||||||||||    
T  30256046 gctgcagttaactgccgaggaaaacctcgatagttaactgc 30256006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 46344911 - 46344991
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| ||| |||||||||| | ||||||||||    
T  46344911 aagtaaaatatttttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaac 46344991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 2271325 - 2271260
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||||    
T  2271325 agttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccataattcatctca 2271260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 43571824 - 43571717
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| || ||||||    | ||||| ||||||||||||||||||| |||||||||||||||||  ||| |||| ||||  ||| ||    
T  43571824 gaaaattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcagttaactgctgaggaattcaaaagtcggctg 43571725  T
Q  423 cagttaac 430  Q
    ||||||||    
T  43571724 cagttaac 43571717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 34648283 - 34648150
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaa--t 480  Q
    ||||| ||||||||||||||||    |  |||||||| ||||||||||   |||||||||| ||   ||| || ||| ||||||||| |||||||||  |    
T  34648283 ccctcagcagttaactgtcgagtttcttcaaaaccggctgcagttaacgaccgaggaaaacctcggcagtaaattgctgaggatcttatgctacaaaatt 34648184  T
Q  481 ctggtagaagctctctcatccattattcatctca 514  Q
    |||| |||||||||||||||||||||||||||||    
T  34648183 ctggcagaagctctctcatccattattcatctca 34648150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 2647776 - 2647648
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctac-aaatctg 483  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||||| || |||| |||||||    
T  2647776 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctgct-ctacaaaatctg 2647678  T
Q  484 gtagaagct-ctctcatccattattcatct 512  Q
    | ||||  | ||||||||||||||||||||    
T  2647677 gcagaatttcctctcatccattattcatct 2647648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 465
Target Start/End: Original strand, 34691620 - 34691701
Alignment:
Q  384 cctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||||| |||| || | |||| |||| |||||||||| |||||||||||| ||  |||||||||||||||||    
T  34691620 cctcggcagttaactgccgaggaaataaaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 34691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 458
Target Start/End: Complemental strand, 7247956 - 7247864
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    ||||||| | |||||| ||||||||||||||||| |||| |||| || |||||| |||||||||| | |||||||||| ||  ||||||||||    
T  7247956 taaaatacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctgcagttaactgacgaggaaaacctcggtagttaactg 7247864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 462
Target Start/End: Complemental strand, 49268943 - 49268845
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||||| |||||  || || || ||||||||| ||| |||| |||| |||| |||||||||| | |||||||||||||  ||||||||||||||    
T  49268943 agtaaaatatgattttgtcccttcagccgttaactgtggaggaattaaaaatccggttgcagttaactgccgaggaaaacatcggtagttaactgccga 49268845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 41805811 - 41805694
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    |||||||| |||||| || |||||| | || | ||| ||||||  || ||||||||| ||||||||||||||||||||  |||| ||| ||||| ||||     
T  41805811 aattgttgatgacacattgcataaggctgaggcacacaagtaatttacgtttttgcttcctcggcagttaactgtcgaagaatttaaagaccggctgcaa 41805712  T
Q  426 ttaacagtcgaggaaaac 443  Q
    ||||| | ||||||||||    
T  41805711 ttaactgccgaggaaaac 41805694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 49140893 - 49140793
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||| ||||||||||||||||| ||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  49140893 ccggctgcagttaactgccgaggaaaacctcagtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattattgatc 49140794  T
Q  512 t 512  Q
    |    
T  49140793 t 49140793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 7839587 - 7839531
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||| ||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  7839587 gtttttgccccctcggcagtaaactgtcgaggaattcaaaaaccggctgcagttaac 7839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 404
Target Start/End: Complemental strand, 42807738 - 42807658
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgag 404  Q
    |||||||||||| |||| ||||||||| | |||| ||| || |||||||  |||||||  |||||||||||||||||||||    
T  42807738 aaaattgttgttaacacatttcataaggctgatgcacacaaataaaatacatttttgcctcctcggcagttaactgtcgag 42807658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 464
Target Start/End: Complemental strand, 49196547 - 49196447
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| |||||||| ||||||  || ||||||||||| |||| |||| |||| ||||||||||   ||||||||||  | ||||||||||| ||||    
T  49196547 agtaaaatacgtttttgccccctcgatagctaactgtcgaggaattaaaaatccggttgcagttaactaccgaggaaaaccgcgatagttaactgtcgag 49196448  T
Q  464 g 464  Q
    |    
T  49196447 g 49196447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Complemental strand, 32593188 - 32593109
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||||||| |  || || |||||| ||||||||||   |||||||||| || ||||||||||||||||||    
T  32593188 tcggcagttaactgtcgaaattttaaagaaccggctgcagttaacttccgaggaaaacttcgatagttaactgccgagga 32593109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 514
Target Start/End: Original strand, 2426559 - 2426609
Alignment:
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||| |||| ||| |||||||||||||| ||||||||||||||    
T  2426559 gatcttctgctataaatttggcagaagctctctcattcattattcatctca 2426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 2743392 - 2743474
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| ||   ||||||||||||||||    
T  2743392 ccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 2743474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 19440251 - 19440329
Alignment:
Q  384 cctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||||||||| |||  |||| | ||||||| |||||||||| | |||||||||| ||  ||||||||||||||    
T  19440251 cctcggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 19440329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 510
Target Start/End: Original strand, 20366191 - 20366313
Alignment:
Q  388 ggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtag 487  Q
    |||||||||||| |||| |||| ||||||| | |||||||||| |   |  ||||| ||  ||||||| || |||||||||||| ||||||||||   ||    
T  20366191 ggcagttaactgccgaggaattcaaaaaccagctgcagttaactgctaaaaaaaacctcggtagttaattgtcgaggatcttctactacaaatctaccag 20366290  T
Q  488 aagctctctcatccattattcat 510  Q
    ||||| |||||| ||||||||||    
T  20366291 aagctttctcattcattattcat 20366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 34049107 - 34049207
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||| ||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  34049107 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattattgatc 34049206  T
Q  512 t 512  Q
    |    
T  34049207 t 34049207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 460
Target Start/End: Original strand, 48888671 - 48888811
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||||||||  |||| |||  ||||||||||| || | ||| |||||||||| ||   ||| |||||||||||| |||| |||| |||| |||| |||    
T  48888671 ttttgaaaattactgttcacatatttcataagactgaggcacacaagtaaaatacgtaaatgccccctcggcagtt-actgccgaggaattaaaaatccg 48888769  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgcc 460  Q
    | |||||||||| | |||||||||  ||  ||||||||||||    
T  48888770 gctgcagttaactgccgaggaaaatctcggtagttaactgcc 48888811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 54389822 - 54389922
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||| ||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  54389822 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattattgatc 54389921  T
Q  512 t 512  Q
    |    
T  54389922 t 54389922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 600632 - 600541
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||| |||||| |||||||||| |||    ||| ||| ||||  ||||||||| |||||||||||| ||  |||||||||||||||||    
T  600632 gtttttgcgccctcgacagttaactgccgaagttttggaaatccggccgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 19341682 - 19341591
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||  ||||||||||||||||| |||| ||||  ||| |||| ||||||||||   |||||||||| ||   ||||||||||||||||    
T  19341682 gtttttgtcccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgccgagga 19341591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 24700718 - 24700797
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||||| ||||  ||| |||| ||||||||||   |||||||| | ||  |||||||||||||||||    
T  24700718 tcggcagttaactgtcgaggaattagaaatccggttgcagttaactcccgaggaaatcctcggtagttaactgccgagga 24700797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 48246398 - 48246488
Alignment:
Q  375 tttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| |||||||||||||||||  ||    ||  ||| |||| |||||||||| |||||||||||| ||  |||||||||||||||||    
T  48246398 tttttgccccctcggcagttaactgctgaagttttagaaatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 48246488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 461
Target Start/End: Original strand, 11380416 - 11380513
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccg 461  Q
    ||||||||| |||||||| || |||||||||||||| |||| |||| ||||   || |||||||||| | |||||| ||| ||  ||||| |||||||    
T  11380416 agtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggttgcagttaactgccgaggataacctcggtagtttactgccg 11380513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 459
Target Start/End: Original strand, 46989532 - 46989617
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgc 459  Q
    |||||||| | ||||||||||||||  |||||||||  ||  |||| |||||||||| | |||||||||| ||  |||||||||||    
T  46989532 gtttttgccctctcggcagttaactaccgagaaatttgaattccggctgcagttaactgccgaggaaaacctcggtagttaactgc 46989617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 463
Target Start/End: Complemental strand, 48250957 - 48250868
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||| |||||||||||||||||  ||| ||||  ||  |||| |||||||||| | |||||||||| ||   ||||||||||||||    
T  48250957 gtttttgccccctcggcagttaactgctgaggaatttgaattccggctgcagttaactgccgaggaaaacctcgggagttaactgccgag 48250868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 463
Target Start/End: Original strand, 52567700 - 52567837
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    |||||||||||| ||||| |||||| | || | |||  ||||||||| | ||||||   ||||||||||||||| |||  |||| ||||| ||| ||||     
T  52567700 aattgttgttgatacgttgcataaggctgaggcacacgagtaaaatacgattttgccttctcggcagttaactgccgaataattcaaaaatcggctgcac 52567799  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||| | |||| ||||| |   |||||||||||||||    
T  52567800 ttaactgccgagaaaaacttaggtagttaactgccgag 52567837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 9582548 - 9582620
Alignment:
Q  390 cagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| ||||||||| ||||||||  |||||||||| | |||| ||||| ||   |||||||||||||    
T  9582548 cagttaactgccgagaaattcaaaaaccgactgcagttaactgccgagaaaaacttcgtcagttaactgccga 9582620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 443
Target Start/End: Original strand, 13743287 - 13743347
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | ||||||||||    
T  13743287 ccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaac 13743347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 363 - 514
Target Start/End: Complemental strand, 12784056 - 12783905
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| | |||||| || |||||||||||||| |||  |||| || |||||| |||||||| | |||||||||||| ||| ||||||||||||||    
T  12784056 aagtaaaatacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagttagctgtcgaggaaaacctcagtagttaactgccga 12783957  T
Q  463 ggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  12783956 ggatcttctgctacaaatctggaaaaagctctctcatccattattcatctca 12783905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 368 - 514
Target Start/End: Original strand, 13401465 - 13401611
Alignment:
Q  368 aaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatc 467  Q
    ||||||| |||||| ||||||||||||||||| |||| |||| ||||| ||| |||||||||| |   ||||||| ||   ||||||||| |||||||||    
T  13401465 aaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcagttaactgctaaggaaaatattggtagttaactaccgaggatc 13401564  T
Q  468 ttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||||    
T  13401565 ttctgctacaaatatgacagaagctctctcatccattattcatctca 13401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 29061331 - 29061395
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29061331 agttaacttccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 29061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 29065791 - 29065853
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 29074804 - 29074866
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 29079568 - 29079630
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29079630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 29107377 - 29107439
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29107439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 13479660 - 13479767
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || | ||| |||||||||| | |||||| ||||||| |||||||||||| | |||| ||||||| | ||    
T  13479660 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtagttaactgtcggggaattcaaaaaccagctg 13479759  T
Q  423 cagttaac 430  Q
    ||||||||    
T  13479760 cagttaac 13479767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 321 - 466
Target Start/End: Original strand, 18001146 - 18001290
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgga 420  Q
    |||||||||||||||||||| |||||||||   || ||||| |||||||||||||   ||| |  ||||||||||||||| ||| |||| |||||||||     
T  18001146 ttgaaaattgttgttgacacatttcataaggttgaggtacacaagtaaaatatgtaaatgccctatcggcagttaactgttgaggaatt-aaaaaccggc 18001244  T
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggat 466  Q
    |||||||||| | ||| |||||| || | | |||||| ||||||||    
T  18001245 tgcagttaactgccgaagaaaacctcgacacttaactaccgaggat 18001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 463
Target Start/End: Original strand, 23958867 - 23958964
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||  |||||||| |||||||||  | |||||||||| ||  |||||||||||||||    
T  23958867 taaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgcagttaaatgccgaggaaaacctcggtagttaactgccgag 23958964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 463
Target Start/End: Original strand, 16192747 - 16192843
Alignment:
Q  367 aaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||| |||||||| |||||||||||||||||||||| |||| ||||| ||| |||||||||  |||||||||| | ||   ||||||||||||||    
T  16192747 aaaatacgtttttgccccctcggcagttaactgtcgagtaatttaaaaatcggctgcagttaagtgtcgaggaaagcctcggcagttaactgccgag 16192843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 32034404 - 32034340
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||| |||||    
T  32034404 agttaactgccgatgatcttctgctacaaatctggcagaagatctcttatccattattcgtctca 32034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 23986080 - 23986013
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||||| |||||||| |||| |||||||||||| ||||||||| ||||||||| ||||||||||    
T  23986080 aagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaac 23986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 31768739 - 31768829
Alignment:
Q  375 tttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| ||||||||||||||||| |||| |||| |||| |||| |||||||||  | |||||||||| ||  |||||||||||||||||    
T  31768739 tttttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgagga 31768829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 462
Target Start/End: Complemental strand, 13404768 - 13404632
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    |||||||||| |||| || |||||| |||| | ||| |||||||||| |  ||||| ||||||| |||||||||||||| |||| || |||| | |||||    
T  13404768 aattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtagttaactgtcgaggaattcaataacctgctgcag 13404669  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| | || ||||||| |   ||||||||||||||    
T  13404668 ttaactgccgtggaaaaccttggtagttaactgccga 13404632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 465
Target Start/End: Original strand, 31146373 - 31146449
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||| |||| ||||  ||| |||| |||||||||| |||||||||||||||  |||||||||||||||||    
T  31146373 gcagttaactgccgaggaatttgaaatccggctgcagttaactgtcgaggaaaacatcggtagttaactgccgagga 31146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 13388787 - 13388705
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| ||||||||| |||||||||  |||  ||| |||||||||| |||||||||||| ||  |||||||||||||||||    
T  13388787 ccctcggtagttaactgccgagaaatttcaaattcggctgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 13388705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 30258356 - 30258263
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctac--aaatctggtagaagctctctcatccattattcatct 512  Q
    |||||||||| |||||||||||  ||   |||||||||||||  |||||| |||||  |||||||  |||||||||||||||||||||||||||    
T  30258356 tgcagttaactgtcgaggaaaatctcggcagttaactgccgataatcttcagctacgaaaatctgagagaagctctctcatccattattcatct 30258263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 465
Target Start/End: Original strand, 2050974 - 2051104
Alignment:
Q  334 ttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcga-gaaattgaaaaaccggatgcagttaacag 432  Q
    ||||||| || |||||| | |||| |||  ||||||||| ||||||||||| |||||||||||||| ||| ||| |||  ||||||| |||||||||| |    
T  2050974 ttgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttg--aaaccggttgcagttaactg 2051071  T
Q  433 tcgaggaaaacatcaatagttaactgccgagga 465  Q
     |||||||||| ||  |||||| |||| |||||    
T  2051072 ccgaggaaaacctcggtagttatctgcagagga 2051104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 6204854 - 6204954
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  6204854 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatc 6204953  T
Q  512 t 512  Q
    |    
T  6204954 t 6204954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 11691821 - 11691921
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  11691821 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatc 11691920  T
Q  512 t 512  Q
    |    
T  11691921 t 11691921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 32643660 - 32643523
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    ||||||||||||| |||| |||||||||   || |  || |||||||||| ||   |||  |||||||||||||||| | || |||| |||| |||| ||    
T  32643660 gaaaattgttgttcacacatttcataaggttgaagcccacaagtaaaatacgtaaatgcctcctcggcagttaactgccaaggaattaaaaatccggctg 32643561  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgcc 460  Q
    |||||||| |||||||||||| ||  ||||||||||||    
T  32643560 cagttaactgtcgaggaaaacctcggtagttaactgcc 32643523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 430
Target Start/End: Original strand, 7537183 - 7537239
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||| |||||||||||||| ||||||| |||| ||||||||| ||||||||||    
T  7537183 gtttttgccccctcggcagttaattgtcgaggaattaaaaaaccggctgcagttaac 7537239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 473
Target Start/End: Original strand, 22305104 - 22305192
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgc 473  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||||| ||||    
T  22305104 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 22305192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 514
Target Start/End: Complemental strand, 17596833 - 17596764
Alignment:
Q  448 atagttaactgccgaggatcttctgctac---aaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| || ||||||||||||||| |   |||||||| ||||||| |||||||||||||||||||||    
T  17596833 atagttaattgtcgaggatcttctgctgctataaatctggcagaagctatctcatccattattcatctca 17596764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 444
Target Start/End: Original strand, 29286166 - 29286284
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || ||||||   || | ||| ||||||  || |||||||| ||||||| ||||||||| |||| || | | ||||||| |||||    
T  29286166 aattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccgaggaaataagaaaccggttgcag 29286265  T
Q  426 ttaacagtcgaggaaaaca 444  Q
    ||||| | |||||||||||    
T  29286266 ttaactgccgaggaaaaca 29286284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 470 - 507
Target Start/End: Original strand, 26855976 - 26856013
Alignment:
Q  470 ctgctacaaatctggtagaagctctctcatccattatt 507  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26855976 ctgctacaaatctggcagaagctctctcatccattatt 26856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 8193282 - 8193206
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||| |||| |||| ||||  ||| |||||||||| | |||||||||| || | ||||||||||||||||    
T  8193282 gcagttaactgccgaggaattaaaaacacggctgcagttaactgccgaggaaaacttcgacagttaactgccgagga 8193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 28362804 - 28362728
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| || |||||||||||| |||||    
T  28362804 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgcagagga 28362728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 32026037 - 32026096
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttg 380  Q
    |||||||||||||||||||| ||||||||| | || | ||| |||||||||| |||||||    
T  32026037 ttgaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgtttttg 32026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 2405438 - 2405512
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagtta 395  Q
    |||| |||||||||| |||||||| ||||| | |||  |||  ||||||||| |||||| |||||||||||||||    
T  2405438 ttgagaattgttgttcacacgtttgataaggctgataaacacgagtaaaatacgttttttctccctcggcagtta 2405512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 6320585 - 6320532
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    |||||||||||||||   ||||||||||||||||||||| |||| |||| ||||    
T  6320585 taaaatatgtttttgtctcctcggcagttaactgtcgaggaattaaaaatccgg 6320532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 11157771 - 11157812
Alignment:
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| |||||||||||| || ||||||||||||||||||    
T  11157771 agttaactgtcgaggaaaacttcgatagttaactgccgagga 11157812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 11840291 - 11840247
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||| |||||||||||| ||  |||||||||||||||||    
T  11840291 tgcagttaactgtcgaggaaaacctcggtagttaactgccgagga 11840247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 323 - 514
Target Start/End: Complemental strand, 958732 - 958542
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||| ||||||||| ||| ||||| | || | |||||||||||||| |||||||  | |||| |||||||||| |||  |||| ||||||||| ||    
T  958732 gaaaattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacagttaactg-cgatgaattcaaaaaccggttg 958634  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| | |||||||||| ||  ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  958633 cagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatccggcagaagctctctcatccattattcttctca 958542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 323 - 514
Target Start/End: Complemental strand, 44561469 - 44561278
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | ||   |||  ||||||||| | |||||| | |||||  |||||||| |||| || | ||||||||| ||    
T  44561469 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgattttgccctctcggttgttaactgccgagtaaataaaaaaccggctg 44561370  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||   |||||||||  ||  ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  44561369 cagttaactaccgaggaaaatctcggtagttaactgccgaggatcgtctgctacaaatctggcagaagctctctcatccattattcatctca 44561278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 364 - 514
Target Start/End: Original strand, 56138222 - 56138377
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaa-----aaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    ||||||||| | |||||| || ||| |||||||||| ||||||||| ||     || |||| |||||||||| | |||||||||| ||| ||||||||||    
T  56138222 agtaaaatacgattttgccccttcgacagttaactgccgagaaattaaattaaaaatccggctgcagttaactgccgaggaaaacctcagtagttaactg 56138321  T
Q  459 ccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  56138322 ccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 56138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 323 - 496
Target Start/End: Complemental strand, 29700441 - 29700268
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || | ||| |||||||||| | |||||   ||||| ||||||||||  ||| |||| || |||||| ||    
T  29700441 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctg 29700342  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctct 496  Q
    |||||||| | |||||||||| ||  ||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  29700341 cagttaactgccgaggaaaacctcggtagttaattgccgatgatcttctgctacaaatctggcagaagctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 34530807 - 34530743
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  34530807 agttaactgccgaggatcttctgctacaaatttggcagaagctctctcatccattattcatctca 34530743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 39588127 - 39588191
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39588127 agttaactgccgaggatcttctgctacaaatatggcagaagctctctcatccattattcatctca 39588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 51429341 - 51429277
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51429341 agttaactgtcgaggatcttctgctacaaatctggaagaagctctctcatccattattcatctca 51429277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 462
Target Start/End: Complemental strand, 37959858 - 37959720
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgc 423  Q
    ||||||||||||||||| || |||||| | || | |||  ||||||||| |||||| | |||||||||||||||||| ||| |||| || |||| | |||    
T  37959858 aaaattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgc 37959759  T
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||| | |||||||||||||  ||||||||||||||    
T  37959758 agttaactgccgaggaaaacatcggtagttaactgccga 37959720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 34154440 - 34154376
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  34154440 agttaactgcagaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 34154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 56304911 - 56304975
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  56304911 agttaattgccgaggattttctgctacaaatctggcagaagctctctcatccattattcatctca 56304975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 4768612 - 4768719
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | |||| ||| |||||||||||  |||||| ||||||||||||||||| |||| |||| |||| | || ||    
T  4768612 gaaaattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggctg 4768711  T
Q  423 cagttaac 430  Q
    ||||||||    
T  4768712 cagttaac 4768719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 51426471 - 51426610
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||||||||||||| |  | | ||| |||||||||| |||||||  |  ||| ||||||||||||||| |||| ||||| ||| ||    
T  51426471 gaaaattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggctg 51426570  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||  | |||| ||||| ||| ||||||||||||||    
T  51426571 cagttaattgccgagaaaaacctcagtagttaactgccga 51426610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 450 - 512
Target Start/End: Complemental strand, 6283479 - 6283417
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  6283479 agttaactgccgaggatcttctgcttcaaatctggccgaagctctctcatccattattcatct 6283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 386 - 510
Target Start/End: Original strand, 1041932 - 1042056
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggt 485  Q
    |||||||||||||| |||| ||||  ||| |||  |||||||||| | |||| ||||  ||  ||||||||||||||||||||||| ||||||||||||     
T  1041932 tcggcagttaactgccgaggaattagaaatccgactgcagttaactgccgagaaaaatctcggtagttaactgccgaggatcttctactacaaatctggc 1042031  T
Q  486 agaagctctctcatccattattcat 510  Q
    | |||||||||||| |||| |||||    
T  1042032 ataagctctctcattcattgttcat 1042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 442
Target Start/End: Complemental strand, 21472624 - 21472504
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    ||||||||||||||||||| ||||||||| | ||   |||  ||||||||| ||||||||  |||||||||||||||| |||| |||| ||||| ||| |    
T  21472624 tgaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggct 21472525  T
Q  422 gcagttaacagtcgaggaaaa 442  Q
    ||||||||| | |||||||||    
T  21472524 gcagttaactgccgaggaaaa 21472504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 42885510 - 42885576
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaa--tctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  42885510 agttaactgccgatgatcttctgctacaaaaatctggcagaagctctctcatccattattcatctca 42885576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 458
Target Start/End: Complemental strand, 38464907 - 38464770
Alignment:
Q  320 tttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    ||||| ||||||||||||||| |||||||||   || |||||| ||||||||||| ||||||| ||||| ||||||| || |||| ||||   |||||||    
T  38464907 tttgagaattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacagttaaatgacgaggaatt-cgaaaccgg 38464809  T
Q  420 atgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
     |||||||||| ||| |||||||| ||  ||||||||||    
T  38464808 ctgcagttaactgtcaaggaaaacctcggtagttaactg 38464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 4786345 - 4786296
Alignment:
Q  451 gttaactgccgaggatcttctgctacaaatctggtagaagctctctcatc 500  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4786345 gttaactgccgatgatcttctgctacaaatctggtagaagctctctcatc 4786296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 28081490 - 28081582
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatct 512  Q
    |||||||||| | |||||||||  ||  ||||||| || ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  28081490 tgcagttaactgccgaggaaaatctcgttagttaagtgtcgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatct 28081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 55793916 - 55794047
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatc 481  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | |||||||||| ||   |||||||||||||||||||||||  |||| |||||    
T  55793916 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggatcttctgcactacaaaatc 55794015  T
Q  482 tggtagaagct-ctctcatccattattcatct 512  Q
    ||| |||| || ||||||||||||||||||||    
T  55794016 tggcagaatctcctctcatccattattcatct 55794047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 465
Target Start/End: Complemental strand, 4980060 - 4979914
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||| ||||||||||||||| || ||||||   || | |||  |||||  || |||||| |||||||||||||||||||||||  | || ||||||||    
T  4980060 ttttgagaattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccg 4979961  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    | |||||||||| |  |||||||  |||  |||||||||||||||||    
T  4979960 gctgcagttaactgctgaggaaattatcggtagttaactgccgagga 4979914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 466
Target Start/End: Original strand, 9889969 - 9890071
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| ||  |||||||||||||||    
T  9889969 agtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 9890068  T
Q  464 gat 466  Q
    |||    
T  9890069 gat 9890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 462
Target Start/End: Original strand, 11494519 - 11494616
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| |||||||  ||||||||| |||||||||||| ||||  |||||||| |||||||||| | |||||||||| ||  ||||||||||||||    
T  11494519 agtaaaatacgtttttgtcccctcggcaattaactgtcgaggaatt-caaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 11494616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 443
Target Start/End: Complemental strand, 49573045 - 49572919
Alignment:
Q  317 atttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaac 416  Q
    ||||| || ||| ||||||||||| || |||||| | || | ||| |||||||||| |||||||| || ||| ||||||||||||||| |||| || ||     
T  49573045 attttagagaatcgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaattcaataat 49572946  T
Q  417 cggatgcagttaacagtcgaggaaaac 443  Q
    ||| |||||||||| | ||||||||||    
T  49572945 cggctgcagttaactgccgaggaaaac 49572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 511
Target Start/End: Complemental strand, 243357 - 243296
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatc 511  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||  |||||||||||    
T  243357 agttaactgtcgaggatcttctgttacaaatctggcagaagctctctcactcattattcatc 243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 15999878 - 15999796
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||| |||||||||  ||| |||| |||| ||||| | |||||||||| ||  |||||||||||||||||    
T  15999878 ccctcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgagga 15999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 6178156 - 6178056
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  6178156 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatc 6178057  T
Q  512 t 512  Q
    |    
T  6178056 t 6178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 512
Target Start/End: Original strand, 49094111 - 49094211
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  49094111 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatc 49094210  T
Q  512 t 512  Q
    |    
T  49094211 t 49094211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 507
Target Start/End: Complemental strand, 41795402 - 41795307
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattatt 507  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||||||||||  |||| |||||||| |||| || |||||||||||||||    
T  41795402 ccggctgcagttaactgccgaggaaaacctcgttagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattatt 41795307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 955726 - 955865
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||| ||||||||| ||||||||    || | ||| |||||||||| ||||||||  | | ||||||||||||  ||| |||| ||||| ||| ||    
T  955726 gaaaattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggctg 955825  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||| | |||| ||||| ||  ||||||||||||||    
T  955826 cagttaactgccgagaaaaacctcggtagttaactgccga 955865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 512
Target Start/End: Complemental strand, 21018081 - 21017951
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttct--gctacaaatct 482  Q
    ||||||||||||||  || |  |||||||| |||| |||| ||||| | |||||||||| ||   ||||||||||||| ||||||||  |||||||||||    
T  21018081 tcggcagttaactgctgaaattttgaaaaatccggctgcaattaactgccgaggaaaacctcggcagttaactgccgatgatcttctgagctacaaatct 21017982  T
Q  483 ggtagaagct-ctctcatccattattcatct 512  Q
    || |||| || |||||||| |||||||||||    
T  21017981 ggcagaatctcctctcatctattattcatct 21017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 34154541 - 34154434
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | ||   |||   ||||||||  ||||||  || |||||||||||||| |||| |||| ||||||||| ||    
T  34154541 gaaaattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagttaactgccgaggaattaaaaaaccggctg 34154442  T
Q  423 cagttaac 430  Q
    ||||||||    
T  34154441 cagttaac 34154434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 442
Target Start/End: Complemental strand, 1044617 - 1044539
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaa 442  Q
    ||||||||||| ||||||||| ||||||||||||||||||  ||||  ||| | || |||||||||| | |||||||||    
T  1044617 agtaaaatatgattttgctccttcggcagttaactgtcgatgaatttgaaatctggctgcagttaactgccgaggaaaa 1044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 15995716 - 15995798
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||| || |||| ||||  ||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||    
T  15995716 ccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 15995798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 18884583 - 18884501
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||| ||| |  |||||||||||| |||||||||| | |||| ||||| ||   ||||||||||||||||    
T  18884583 ccctcggcagttaactgccgaaattttgaaaaaccggctgcagttaactgccgagaaaaacttcggcagttaactgccgagga 18884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 19069181 - 19069263
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||| || |||| ||||  ||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||    
T  19069181 ccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgagga 19069263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 17139618 - 17139665
Alignment:
Q  382 tccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  17139618 tccctcggcagttaactgtcgagaaa-taaaaaaccggctgcagttaac 17139665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 463
Target Start/End: Original strand, 21470877 - 21470977
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||||| |||||||    ||||||||||||||||||||  ||| |||||| |  |||||||||| |  ||||||||| ||  ||||||||||||||    
T  21470877 aagtaaaatacgtttttgtcttctcggcagttaactgtcgaggtattcaaaaactgactgcagttaaccgcagaggaaaacctcggtagttaactgccga 21470976  T
Q  463 g 463  Q
    |    
T  21470977 g 21470977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 16984249 - 16984158
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||| | ||||||||||||||||| |||    ||  ||| |||| |||||||||| | |||||||||| || ||||||||||||||||||    
T  16984249 gtttttaccccctcggcagttaactgccgaagttttagaaatccggctgcagttaactgccgaggaaaacctcgatagttaactgccgagga 16984158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 24417487 - 24417448
Alignment:
Q  391 agttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  24417487 agttaactgtcgagaaattcaaaaaccggctgcagttaac 24417448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 465
Target Start/End: Complemental strand, 44051228 - 44051089
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | || | |||  |||||  || |||||||| || ||||| |||||||| |||| || | | ||||||| |||||    
T  44051228 aattgttgttgacacattgcataaggctgaggcacaccagtaatttacgtttttgccccatcggcggttaactgccgaggaaataagaaaccggctgcag 44051129  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||   |||||||| | ||  |||||||||||||||||    
T  44051128 ttaactcccgaggaaatcctcggtagttaactgccgagga 44051089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 48806482 - 48806561
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||||||||||| |  || || |||||| |||||||||| | |||||||||  |||  ||||||||||||||||    
T  48806482 tcggcagttaactgtcgaaattttaaagaaccggctgcagttaactgccgaggaaaatttcagcagttaactgccgagga 48806561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 441
Target Start/End: Original strand, 50274745 - 50274812
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaa 441  Q
    |||||||| ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | ||||||||    
T  50274745 gtttttgccccctcggcagttaactgccgaggaattagaaatccggctgcagttaactgccgaggaaa 50274812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 18578623 - 18578705
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacat 445  Q
    ||||||||||  |||||||  ||| ||||||||||||||||| |||| ||||| ||| |||||||| | | |||| |||||||    
T  18578623 aagtaaaatacatttttgcctccttggcagttaactgtcgaggaattcaaaaaacggctgcagttatctgccgagaaaaacat 18578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 37394223 - 37394289
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    ||||||||| | ||||||  | ||||||||||||||||||| ||||  ||| |||||||||||||||    
T  37394223 agtaaaatacgattttgcctcttcggcagttaactgtcgaggaatttgaaatccggatgcagttaac 37394289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 479
Target Start/End: Original strand, 37865203 - 37865232
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaa 479  Q
    ||||||||||||||||||||||||||||||    
T  37865203 agttaactgccgaggatcttctgctacaaa 37865232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 48256624 - 48256567
Alignment:
Q  406 aattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||| |||| |||| |||||||||| | |||||||||| ||| |||||||||||||||    
T  48256624 aattaaaaatccggctgcagttaactgccgaggaaaacttcagtagttaactgccgag 48256567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 374 - 458
Target Start/End: Original strand, 6280842 - 6280926
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||||||| | ||||||||||||||||| |  |||| ||||||||| |||||||||     ||||||||||||  ||||||||||    
T  6280842 gtttttgccctctcggcagttaactgtcaaagaatttaaaaaccggctgcagttaaatactgaggaaaacatcggtagttaactg 6280926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 471 - 507
Target Start/End: Original strand, 11287557 - 11287593
Alignment:
Q  471 tgctacaaatctggtagaagctctctcatccattatt 507  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  11287557 tgctacaaatgtggcagaagctctctcatccattatt 11287593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 464
Target Start/End: Original strand, 41023385 - 41023461
Alignment:
Q  388 ggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    |||||||||||| |||||||||  ||| |||| |||||||||| |  ||||||| | ||  ||||||||||||||||    
T  41023385 ggcagttaactgccgagaaatttgaaatccggctgcagttaactgctgaggaaatcctcggtagttaactgccgagg 41023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 326 - 512
Target Start/End: Complemental strand, 30355375 - 30355189
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||||||| ||| ||   |||  ||||||||| | |||||| |||||||||||||| ||  ||  |||| ||||| ||| |||||    
T  30355375 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggctgcag 30355276  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||| | |||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30355275 ttaactgccgaggaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 30355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 326 - 514
Target Start/End: Complemental strand, 46863480 - 46863292
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||| | || |||||| | ||   ||| |||||||||| |||||||| || |||||||||||||| ||||||||||||||||||| |||||    
T  46863480 aattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcag 46863381  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| |   | |||||  ||  |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  46863380 ttaactgcgaacgaaaatctctgtagttaactgccgaagatcttctgctacaaatctggcagaagctctttcatccattattcatctca 46863292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 326 - 514
Target Start/End: Original strand, 41047715 - 41047902
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||||| |  | |||||| |||||||  |||||||| | |||| |||||||||  ||  |||| || || ||| || ||    
T  41047715 aattgttgttgacacattgcataagactgcggcacataaataaaatacatttttgcttc-tcggtagttaactgcagaagaatttaataatcgggtgtag 41047813  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| | |||||||||| ||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  41047814 ttaactgccgaggaaaacttcggtagttaactgccgaggatcttctgctacaaatctggaggaagctctctcatccattattcatctca 41047902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 326 - 511
Target Start/End: Complemental strand, 28980309 - 28980123
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | ||   |||  ||||||||| |||||||| ||||| ||||||| ||| |||  |||| || | ||||||||||    
T  28980309 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatgcag 28980210  T
Q  426 ttaacagtcga-ggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatc 511  Q
    ||||| | ||| ||||||| ||  |||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  28980209 ttaactgccgaaggaaaacctcggtagttaactgccgaggattttctgctacaaatctgacagaagctctctcatccattattcatc 28980123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 326 - 514
Target Start/End: Original strand, 42681931 - 42682119
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||| ||||||  ||| ||||| | || | |||||||||||||   ||||||   |||||| ||||||| || |||||||| ||||||| | |||||    
T  42681931 aattgttcttgacatattttataaggctgaggcacataagtaaaatgcatttttgtctcctcggtagttaacggttgagaaattcaaaaaccagctgcag 42682030  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||| | |||||||||| ||  || ||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||||||||    
T  42682031 ttaactgccgaggaaaacctcggtaattaactgccgaggatcttctgctacaaatctagcataagttctctcatccattattcatctca 42682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 421 - 514
Target Start/End: Original strand, 40587693 - 40587786
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||    
T  40587693 tgcagttaactgtcgaggaaaacctcagtagttaactgccgaggatcttatgctataaatctgaaagaagctctctcatccattattcatctca 40587786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 21188438 - 21188374
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21188438 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 21188374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 323 - 464
Target Start/End: Complemental strand, 9494945 - 9494804
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | || | ||| |||||||||| || | ||| ||||||||||||||||| |||| |||| ||||||||| ||    
T  9494945 gaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggctg 9494846  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    |||||||| | |||||||||| ||   ||||||||| |||||    
T  9494845 cagttaactgccgaggaaaacctcgggagttaactgtcgagg 9494804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 434 - 514
Target Start/End: Original strand, 17838695 - 17838776
Alignment:
Q  434 cgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  17838695 cgaggaaaacctcgatagttaactgccgacgatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 17838776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 434 - 514
Target Start/End: Complemental strand, 36394966 - 36394886
Alignment:
Q  434 cgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||| ||  ||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  36394966 cgaggaaaacctcggtagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccgttattaatctca 36394886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 320 - 459
Target Start/End: Original strand, 36392056 - 36392195
Alignment:
Q  320 tttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    ||||| ||||||||||||||| || |||||| |  | | ||| |||||||||| |||||||| |||||| ||||||||||| ||| |||| ||||| |||    
T  36392056 tttgagaattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcgg 36392155  T
Q  420 atgcagttaacagtcgaggaaaacatcaatagttaactgc 459  Q
     ||| |||||| | |||||||||| |||| ||||||||||    
T  36392156 ttgcggttaactgccgaggaaaacctcaaaagttaactgc 36392195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 464
Target Start/End: Original strand, 37340231 - 37340377
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    ||||||| ||||| ||||||||| || ||||||||  | | |||||| ||||||| |||||||   | ||| ||||||||||||||| |||| |||||||    
T  37340231 tttttgagaattgatgttgacacattacataagactaaggcacataaataaaatacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaacc 37340330  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    || |||||||||| | |||| ||||| ||  ||||||||||||||||    
T  37340331 ggttgcagttaactgccgagaaaaacctcggtagttaactgccgagg 37340377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 34139932 - 34139996
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||    
T  34139932 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 34139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 430
Target Start/End: Original strand, 45361619 - 45361690
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| |||| |||| |||| ||||||||||    
T  45361619 acatgagtaaaatatgtttttgctccctcggcagttaactgacgaggaattaaaaatccggctgcagttaac 45361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 45364227 - 45364168
Alignment:
Q  455 actgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctcttatctattattcatctca 45364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 326 - 463
Target Start/End: Original strand, 47060864 - 47061000
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    |||| |||||||||  ||||||||| | || | | | |||||||||| |||||||| |||||||||||||||||||||| ||||  |||| ||| || ||    
T  47060864 aattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaatt-caaaatcggctgtag 47060962  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||| | |||||||||| ||  |||||||||||||||    
T  47060963 ttaactgccgaggaaaacctcggtagttaactgccgag 47061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 10225985 - 10225902
Alignment:
Q  321 ttgaaaattgttgttgacacgttt-cataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcga 403  Q
    |||||||||||||||||||| ||| |||||| | || | |||||||||||||||||||||||  ||||| ||||||||||||||    
T  10225985 ttgaaaattgttgttgacacattttcataaggctgaagcacataagtaaaatatgtttttgcctcctcgacagttaactgtcga 10225902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 430
Target Start/End: Original strand, 46860485 - 46860552
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    |||||||||| | |||||| |||||||||||||||||||||| |||||||||||||  ||||||||||    
T  46860485 aagtaaaatacgcttttgccccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaac 46860552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 28115545 - 28115480
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||  |||| ||||||||||||||||| | | |||||||||||||||||||||||||||    
T  28115545 tagttaactgttgagggtcttctgctacaaatctagcataagctctctcatccattattcatctca 28115480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 449 - 510
Target Start/End: Complemental strand, 43686920 - 43686859
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcat 510  Q
    ||||||||||||||| || ||||||||||||||||  | |||||||||||||||||||||||    
T  43686920 tagttaactgccgagaattttctgctacaaatctgacataagctctctcatccattattcat 43686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 47776307 - 47776408
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||||| |||||| |||||||||| ||||||||| |||| | || |||||||||| | |||||||||| ||  || ||||||||||||    
T  47776307 agtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgaggaaaacctcggtaattaactgccgag 47776406  T
Q  464 ga 465  Q
    ||    
T  47776407 ga 47776408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 458 - 514
Target Start/End: Original strand, 48269710 - 48269766
Alignment:
Q  458 gccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||  | ||| |||||||||||||||||||||||    
T  48269710 gccgaggatcttctgctacaaatctgacaaaagttctctcatccattattcatctca 48269766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 48314611 - 48314714
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || ||||||   || ||||| ||||||||||  ||||||| ||||||||||||||||| |||| |||| || |||||| |||||    
T  48314611 aattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgc-ccctcggcagttaactgccgaggaattcaataaccggctgcag 48314709  T
Q  426 ttaac 430  Q
    |||||    
T  48314710 ttaac 48314714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 465
Target Start/End: Original strand, 19044223 - 19044369
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    ||||||| |||| |||||||||| || |||||| | || | |||| ||||||||| ||||||| || |||||||||||| || |||| ||||   |||||    
T  19044223 tttttgagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt-tgaaacc 19044321  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |  |||||||||  | |||||||||| ||  |||||||||||||||||    
T  19044322 gactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 19044369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 20710413 - 20710267
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    ||||||| |||| |||||||||| || |||||| | || | |||| ||||||||| ||||||| || |||||||||||| || |||| ||||   |||||    
T  20710413 tttttgagaattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt-tgaaacc 20710315  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |  |||||||||  | |||||||||| ||  |||||||||||||||||    
T  20710314 gactgcagttaattgccgaggaaaacttcggtagttaactgccgagga 20710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 10705180 - 10705302
Alignment:
Q  321 ttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgga 420  Q
    |||||||||||| ||||||  ||||||||| |  | | ||| ||||||||||  ||||| | |||| |||||||||||| ||||||||| ||||| |||     
T  10705180 ttgaaaattgttattgacatatttcataaggctaaggcacacaagtaaaatacatttttccccccttggcagttaactgccgagaaattaaaaaatcggc 10705279  T
Q  421 tgcagttaacagtcgaggaaaac 443  Q
    |||||||||| | |||| |||||    
T  10705280 tgcagttaactgccgagaaaaac 10705302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 359 - 441
Target Start/End: Complemental strand, 27453697 - 27453615
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaa 441  Q
    |||||||||||||| |  ||||| ||||||||||||||||| |||| |||| |||| |||| |||||||||| | ||||||||    
T  27453697 acataagtaaaatacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctgcagttaactgccgaggaaa 27453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 41049324 - 41049208
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | |||| |||||||||||||| | ||||| | | |||| |||||||||||||  |||| || || ||| |||||    
T  41049324 aattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttg-ttcttcggtagttaactgtcgaagaattcaataatcggctgcag 41049226  T
Q  426 ttaacagtcgaggaaaac 443  Q
    ||||| | ||||||||||    
T  41049225 ttaactgccgaggaaaac 41049208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 512
Target Start/End: Complemental strand, 9367770 - 9367670
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatctggtagaagct-ctctcatccattattcatc 511  Q
    |||| |||||||||| | |||||||||| ||  ||||||||||||||||| ||||||  |||| |||||||| |||| || ||||||||||||||| |||    
T  9367770 ccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaacttctgcactacaaaatctggcagaatctcctctcatccattattgatc 9367671  T
Q  512 t 512  Q
    |    
T  9367670 t 9367670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 42684262 - 42684218
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaa 407  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  42684262 aagtaaaatacgtttttgttccatcggcagttaactgtcgagaaa 42684218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 441
Target Start/End: Original strand, 34622436 - 34622551
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| || |||||| | || | ||| ||||||  || |||||||| |||| | ||||||||||  ||| |||| | ||||||  |||||    
T  34622436 aattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacagttaactgcagaggaattaagaaaccgactgcag 34622535  T
Q  426 ttaacagtcgaggaaa 441  Q
    ||||| ||||||||||    
T  34622536 ttaactgtcgaggaaa 34622551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 36186611 - 36186491
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgt-acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    |||||||||||||||||| || |||||| | | ||| |||  ||||||||| | |||||| |||||||||||||| || |||| ||||   ||||||| |    
T  36186611 gaaaattgttgttgacacattgcataaggctg-tgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaatt-cgaaaccggtt 36186514  T
Q  422 gcagttaacagtcgaggaaaaca 444  Q
    ||||||||| | |||||||||||    
T  36186513 gcagttaactgccgaggaaaaca 36186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 407
Target Start/End: Complemental strand, 40590587 - 40590546
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaa 407  Q
    ||||||| |||||||| ||||||||||||||||| |||||||    
T  40590587 taaaatacgtttttgccccctcggcagttaactgccgagaaa 40590546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 399
Target Start/End: Original strand, 48269618 - 48269690
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactg 399  Q
    ||||||||||||||| ||| ||||| | || | ||| ||||||||||||||||| | | |||||||||||||||    
T  48269618 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgttttt-ccctctcggcagttaactg 48269690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 10708401 - 10708333
Alignment:
Q  331 ttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactg 399  Q
    |||||||||| ||||||||||| ||   |||  |||||||||| ||||||| || ||||||||||||||    
T  10708401 ttgttgacacatttcataagactgagaaacacgagtaaaatatatttttgccccttcggcagttaactg 10708333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 20353971 - 20353927
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||    
T  20353971 tgcagttaactatcgaggaaaacctcagtagttaactgccgagga 20353927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 476 - 512
Target Start/End: Complemental strand, 48316295 - 48316259
Alignment:
Q  476 caaatctggtagaagctctctcatccattattcatct 512  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  48316295 caaatctggcagaagctctctcatccattattaatct 48316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 7e-38; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 326 - 514
Target Start/End: Original strand, 13972001 - 13972187
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||||||||| | ||   ||| |||||||||| |||||||| || |||||||||| ||| |||| |||| |||||| || |||||    
T  13972001 aattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtta-ctgccgaggaatt-aaaaactggctgcag 13972098  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| |||||||||| ||  || | ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  13972099 ttaacagccgaggaaaacctcggtattaaacagccgaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 13972187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 323 - 463
Target Start/End: Original strand, 29261349 - 29261488
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||||||||||||| | |||| ||| |||||||||| ||||||||  ||||||||||||||||| ||||||||| |||| ||| ||    
T  29261349 gaaaattgttgttgacacgtttcataaggc-gatgcacagaagtaaaatacgtttttgcctcctcggcagttaactgtagagaaattgtaaaatcggctg 29261447  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    || ||||| | ||| |||||| ||| |||||||||| ||||    
T  29261448 caattaactgccgaagaaaacctcagtagttaactgtcgag 29261488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 42572836 - 42572705
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaa-aaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatc 481  Q
    |||||| |||||||||||||| |  ||||| ||||||| |||||||||| |||||||    | ||  |||||||||||||||||||||||||||||||||    
T  42572836 ccctcgacagttaactgtcga-attttgaagaaaccggctgcagttaactgtcgaggttttcctcggtagttaactgccgaggatcttctgctacaaatc 42572738  T
Q  482 tggtagaagctctctcatccattattcatctca 514  Q
    ||| |||||||||||||||||||||||||||||    
T  42572737 tggcagaagctctctcatccattattcatctca 42572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 29763232 - 29763167
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29763232 tagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 29763167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 27487678 - 27487614
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27487678 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 27487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 6434795 - 6434873
Alignment:
Q  436 aggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||| ||  |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6434795 aggaaaacttcggtagttaactgccaaggatcttctgctacaaatctggtagaagcactctcatccattattcatctca 6434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 326 - 512
Target Start/End: Complemental strand, 49927649 - 49927451
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||||||| | ||||   |||  ||||||||| |||||||  ||||||||||||||||| |||  |||| ||||||||| |  ||    
T  49927649 aattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggctatag 49927550  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactg------------ccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatct 512  Q
    ||||| | |||| ||||| ||  ||||||||||            |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49927549 ttaactgccgagaaaaacctcggtagttaactgtcgagttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 49927451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 514
Target Start/End: Complemental strand, 14174923 - 14174859
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  14174923 agttaactgccgaggatcttctgctaaaaatctggcagaagctctctcatccattattcatctca 14174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 326 - 462
Target Start/End: Original strand, 46141719 - 46141855
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||  || |||||| | || ||||| |||||||||| | |||||| | ||||||||||||||| |||| |||| || |||||| |||||    
T  46141719 aattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcag 46141818  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| | |||||||||||||  ||||||||||||||    
T  46141819 ttaactgccgaggaaaacatcggtagttaactgccga 46141855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 323 - 463
Target Start/End: Original strand, 46973138 - 46973277
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| |||||| || | ||   ||| |||||||||| | |||||| |||| |||||||||||| |||| |||| ||||||||| ||    
T  46973138 gaaaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctg 46973237  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||| | |||||||||| || ||||||||||||||||    
T  46973238 cagttaactgccgaggaaaacctc-atagttaactgccgag 46973277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 421 - 514
Target Start/End: Original strand, 13147528 - 13147621
Alignment:
Q  421 tgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||||||   |||||||||| || | ||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  13147528 tgcagttaactaccgaggaaaacctcgacagttaactgtcgatgatcttctgctacaaatctggtaaaaactctctcatccattattcatctca 13147621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 13173765 - 13173889
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    ||||||||||||||||||||||| ||||||||| | || | ||| ||||||||||   |||||| ||||||||||||||||| |  | |||| |||||||    
T  13173765 tttttgaaaattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactg-ctgggaattcaaaaacc 13173863  T
Q  418 ggatgcagttaacagtcgaggaaaac 443  Q
    || |||||||||||| ||||||||||    
T  13173864 ggctgcagttaacagccgaggaaaac 13173889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 364 - 463
Target Start/End: Complemental strand, 13178230 - 13178131
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| ||||||||||||||||||||||||||  |||||||| ||||||| | |||||||||| |  ||||||||| || | ||||||||||||||    
T  13178230 agtaaaatacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgcagttaactgctgaggaaaacctcgagagttaactgccgag 13178131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 459 - 514
Target Start/End: Complemental strand, 26637259 - 26637204
Alignment:
Q  459 ccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26637259 ccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 26637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 458
Target Start/End: Complemental strand, 41804172 - 41804037
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||| ||||| | || | ||| |||||||||| | |||||| || |||||||||||||| |||| |||| ||||||||  ||    
T  41804172 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactg 41804073  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||||||| | |||||||||| ||  ||||||||||    
T  41804072 cagttaactgccgaggaaaacctcggtagttaactg 41804037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 364 - 514
Target Start/End: Complemental strand, 29709408 - 29709259
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||||  |||||||||  ||||||||||||||| || ||||| |||||| |  |||||||||| |  ||| ||||  |||||||||||||| | |     
T  29709408 agtaaaatacatttttgctcattcggcagttaactgttgaaaaattcaaaaactgt-tgcagttaactgatgagaaaaatctcaatagttaactgtcaaa 29709310  T
Q  464 gatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||| ||||| |||||| | ||||||||| |||||||||||||||||||    
T  29709309 gatcttttgctataaatctagcagaagctctttcatccattattcatctca 29709259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 462
Target Start/End: Complemental strand, 18975256 - 18975120
Alignment:
Q  326 aattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcag 425  Q
    ||||||||||||||| ||  ||||  | || ||||| |||||||||| |||||||| |||||||| ||||||||||||| |||| || ||| || |||||    
T  18975256 aattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttgcag 18975157  T
Q  426 ttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||| |  ||||||||| ||  ||||||||||||||    
T  18975156 ttaactgcagaggaaaacttcggtagttaactgccga 18975120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 19053993 - 19054100
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||||||||| | ||   |||  ||||||||| |||||||| |||||| |||||||||| |||| |||| ||||||||| ||    
T  19053993 gaaaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctg 19054092  T
Q  423 cagttaac 430  Q
    ||||||||    
T  19054093 cagttaac 19054100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 449 - 500
Target Start/End: Original strand, 49395663 - 49395714
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatc 500  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49395663 tagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 49395714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 49426750 - 49426813
Alignment:
Q  452 ttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    ||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  49426750 ttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 49426813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 512
Target Start/End: Original strand, 19159619 - 19159750
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttct--gctac-aaatc 481  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | | |||||||| ||  |||||||||||||||||||||||  ||||| |||||    
T  19159619 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccaaggaaaacctcggtagttaactgccgaggatcttctgcgctacaaaatc 19159718  T
Q  482 tggtagaagct-ctctcatccattattcatct 512  Q
    ||| |||| || ||||||||||||||||||||    
T  19159719 tggcagaatctcctctcatccattattcatct 19159750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 44596896 - 44596960
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||| ||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  44596896 agttaactgctgagtatcttctgctacaaatttggcagaaactctctcatccattattcatctca 44596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 459
Target Start/End: Complemental strand, 23276206 - 23276111
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgc 459  Q
    ||||||||| |||||||| |||||||||||||||||  ||| |||| |||| |||| | |||||||| | |||||||||| || ||||||||||||    
T  23276206 agtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggctacagttaactgccgaggaaaacctcgatagttaactgc 23276111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 35521548 - 35521654
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| ||| ||||| | || | ||| |||||||||| | |||||| | ||||||||||||||| |||| || | ||||||||| ||    
T  35521548 gaaaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaaataaaaaaccggctg 35521647  T
Q  423 cagttaa 429  Q
    |||||||    
T  35521648 cagttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 364 - 464
Target Start/End: Original strand, 11183161 - 11183261
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| ||||||||||||| | ||||||||||  ||| |||| |||| |||| |||||||||| | |||||||||| ||  |||||||||| ||||    
T  11183161 agtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgtcgag 11183260  T
Q  464 g 464  Q
    |    
T  11183261 g 11183261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 323 - 463
Target Start/End: Complemental strand, 21944519 - 21944379
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||||||| | ||||||| | |    |||||| ||||||| ||||||   ||||||  || |||||||||||||||| ||||||||| ||    
T  21944519 gaaaattgttgttgacacatatcataaggctgggacacataaataaaatacgtttttatcccctcgatagataactgtcgagaaatttaaaaaccggctg 21944420  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||   | |||||||||| || |||||||||| |||||    
T  21944419 cagttagttgccgaggaaaacctcgatagttaactaccgag 21944379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 462
Target Start/End: Original strand, 26633465 - 26633600
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgc 423  Q
    ||||||||||||||||| |||||||||   || | ||| |||||||||| | |||||| |||||||   ||||||  |||  |||| ||||||||| |||    
T  26633465 aaaattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctcgg---ttaactaccgaagaattcaaaaaccggttgc 26633561  T
Q  424 agttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||| | |||||||||| ||  ||||||||||||||    
T  26633562 agttaactgccgaggaaaacctcggtagttaactgccga 26633600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 514
Target Start/End: Original strand, 29434950 - 29435097
Alignment:
Q  366 taaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||| |||||| | | || ||||||||||| ||||  |||| || |||||  ||||||||||   ||| || ||| ||  ||||||||||| |||||    
T  29434950 taaaatacgtttttaccctcttggcagttaactttcgaagaattcaataaccgactgcagttaacttccgatgacaacctcggtagttaactgcagagga 29435049  T
Q  466 tcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    | || |||||||||| ||| ||||| |||||||||||||||||||||||    
T  29435050 tttt-tgctacaaatttggcagaagttctctcatccattattcatctca 29435097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 454 - 514
Target Start/End: Original strand, 51269003 - 51269063
Alignment:
Q  454 aactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||| |||||||||||||||||||||| | | |||||||||||||| ||||||||||||||    
T  51269003 aactaccgaggatcttctgctacaaatttagcagaagctctctcattcattattcatctca 51269063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 36908512 - 36908619
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||| ||||||||| ||| |||||   || | ||| ||||||||||  |||||||  ||||||||||||||||||||  |||| ||||||||| ||    
T  36908512 gaaaattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctg 36908611  T
Q  423 cagttaac 430  Q
    ||||||||    
T  36908612 cagttaac 36908619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 462
Target Start/End: Original strand, 49924786 - 49924929
Alignment:
Q  319 ttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccg 418  Q
    |||||| ||||||||||||||| || |||||| | || | |||  |||||  || |||||||| || |||||| ||||||| ||| ||||| ||||||||    
T  49924786 ttttgagaattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaaaaattcaaaaaccg 49924885  T
Q  419 gatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    | | |||||||| | |||||||| ||||   |||||||||||||    
T  49924886 gctacagttaactgccgaggaaatcatcgggagttaactgccga 49924929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 333 - 443
Target Start/End: Complemental strand, 25040205 - 25040095
Alignment:
Q  333 gttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacag 432  Q
    |||||||| ||||||||  |||| | ||| ||||||||||   |||||  || ||||||||||||||||||||||||  |||||||| | |||||||  |    
T  25040205 gttgacacatttcataaagccgaggcacacaagtaaaatacaattttgtcccttcggcagttaactgtcgagaaattttaaaaccggcttcagttaattg 25040106  T
Q  433 tcgaggaaaac 443  Q
    |||||||||||    
T  25040105 tcgaggaaaac 25040095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 386 - 464
Target Start/End: Complemental strand, 35258948 - 35258870
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagg 464  Q
    |||||||||||||| |||| |||| |||| |||| |||||||||||  |||||||||| || || ||||||||||||||    
T  35258948 tcggcagttaactgccgaggaattaaaaatccggctgcagttaacacccgaggaaaacctcgatggttaactgccgagg 35258870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 6562259 - 6562158
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||| | ||  |||||||||||||||    
T  6562259 agtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgag 6562160  T
Q  464 ga 465  Q
    ||    
T  6562159 ga 6562158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 459
Target Start/End: Complemental strand, 19499249 - 19499115
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||||||||  ||| | ||||||||| ||   ||| |||||||||| |||||||  |||||| ||||||||||  |||||||| ||||  ||| ||    
T  19499249 gaaaattgttgttcgcacatatcataagactgagacacacaagtaaaatacgtttttg--ccctcgacagttaactgctgagaaatttaaaattcggctg 19499152  T
Q  423 cagttaacagtcgaggaaaacatcaatagttaactgc 459  Q
    |||||||| | |||||||||| ||| | |||||||||    
T  19499151 cagttaactgccgaggaaaacctcagtcgttaactgc 19499115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 4208454 - 4208502
Alignment:
Q  462 aggatcttctgctacaaatctggtagaagctctctcatccattattcat 510  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||    
T  4208454 aggatcttctgctacaaatctaccagaagctctctcatccattattcat 4208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 473
Target Start/End: Complemental strand, 13636199 - 13636111
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgc 473  Q
    |||||||||||||| ||| |  |||||||| |||| |||||||||| | |||||||||| ||  |||||||||||||||||||| ||||    
T  13636199 tcggcagttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggatctcctgc 13636111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 462
Target Start/End: Original strand, 36072303 - 36072442
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    ||||||||||||||||||| |||||||||    | | ||| || ||||||| | ||||| || | ||| | ||| ||| ||||||||||||||| ||| |    
T  36072303 tgaaaattgttgttgacacatttcataaggttaaggcacacaaataaaatacgattttgttctc-cggtaattagctgccgagaaattgaaaaatcggct 36072401  T
Q  422 gcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| | |||||||||| ||  ||||||||||||||    
T  36072402 gcagttaactgccgaggaaaacctcggtagttaactgccga 36072442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 463
Target Start/End: Complemental strand, 36076699 - 36076557
Alignment:
Q  320 tttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccgg 419  Q
    ||||||||||| ||||||||| ||||||||| | ||   ||| |||||||||| | |||| | || |||| |||||||   |||| |||| |||||||||    
T  36076699 tttgaaaattgctgttgacacatttcataaggctgagaaacacaagtaaaatacg-ttttaccccttcggtagttaaccaccgaggaattcaaaaaccgg 36076601  T
Q  420 atgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
     |||||||||| | |||||||||| ||  |||| ||||||||||    
T  36076600 ctgcagttaactgccgaggaaaacctcgctagtaaactgccgag 36076557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 462
Target Start/End: Original strand, 52802116 - 52802203
Alignment:
Q  375 tttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||| | ||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| ||  ||||||||||||||    
T  52802116 tttttgccctctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 52802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 430
Target Start/End: Original strand, 27485034 - 27485100
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaac 430  Q
    ||||||||| |||||||| ||||||||||||||||| | || |||| |||| |||| ||||||||||    
T  27485034 agtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctgcagttaac 27485100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 459 - 514
Target Start/End: Original strand, 36908640 - 36908699
Alignment:
Q  459 ccgaggatcttctgctacaaatctggtagaagctctc----tcatccattattcatctca 514  Q
    ||||||| |||||||||||||||||| ||||||||||    |||||||||||||||||||    
T  36908640 ccgaggagcttctgctacaaatctggcagaagctctctcattcatccattattcatctca 36908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 406
Target Start/End: Original strand, 42570077 - 42570159
Alignment:
Q  324 aaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaa 406  Q
    ||||||||||||||||||||||||||| | || | ||| |||||||| | | |||| |  ||||| |||||||||||||||||    
T  42570077 aaaattgttgttgacacgtttcataaggctgaggcacacaagtaaaacacgattttacatcctcgacagttaactgtcgagaa 42570159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 44470090 - 44470008
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||||| ||   ||||||||||||||||    
T  44470090 ccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgagga 44470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 507
Target Start/End: Complemental strand, 24364801 - 24364680
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggt 485  Q
    |||||||||||||| |||| |  |  |||| ||| ||||||||||    ||||||||| || | ||||||||||||| |  ||  ||||||||||||||     
T  24364801 tcggcagttaactgccgaggaggtttaaaatcggttgcagttaactactgaggaaaacctcgacagttaactgccgatgcgctcttgctacaaatctggc 24364702  T
Q  486 agaagctctctcatccattatt 507  Q
    |||||||||| |||||||||||    
T  24364701 agaagctctcacatccattatt 24364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 48751508 - 48751407
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||| | ||||| |||| |||| |||| |||| |||||||||  | |||||||||| ||  |||||||||||||||    
T  48751508 agtaaaatacgattttaccccctcggcactgaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccgag 48751409  T
Q  464 ga 465  Q
    ||    
T  48751408 ga 48751407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 465
Target Start/End: Original strand, 15047274 - 15047358
Alignment:
Q  381 ctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||  | ||  |||||||||||||||||    
T  15047274 ctccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaattcctcggtagttaactgccgagga 15047358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 462
Target Start/End: Complemental strand, 29438108 - 29438020
Alignment:
Q  374 gtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    |||||||| |||||||||||||||||  || | ||| ||||||||| ||||||||||   |||||||||| ||  || |||||||||||    
T  29438108 gtttttgccccctcggcagttaactgcagaaatattaaaaaaccggctgcagttaactaccgaggaaaacctcggtaattaactgccga 29438020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 30910082 - 30910022
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    |||||||||||||||||||||| ||||  ||| |||| |||||||||| | ||||||||||    
T  30910082 ccctcggcagttaactgtcgaggaatttgaaatccggctgcagttaactgccgaggaaaac 30910022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 465
Target Start/End: Original strand, 38689866 - 38690007
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgt-acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggat 421  Q
    |||||||||||||||||| || |||||  | | ||| |||| ||||||||| | |||| | ||||||| |||||| ||||||| ||||  ||| |||| |    
T  38689866 gaaaattgttgttgacacattgcataaagctg-tgtcacatgagtaaaatacgcttttaccccctcggtagttaaatgtcgaggaattcgaaa-ccggct 38689963  T
Q  422 gcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||| | | |||||||| ||  |||||||||||||||||    
T  38689964 gcagttaactgccaaggaaaacctcggtagttaactgccgagga 38690007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 514
Target Start/End: Original strand, 41779766 - 41779804
Alignment:
Q  476 caaatctggtagaagctctctcatccattattcatctca 514  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  41779766 caaatctagcagaagctctctcatccattattcatctca 41779804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 463
Target Start/End: Original strand, 44336249 - 44336323
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    |||||||||||||||| ||||  |||  ||| |||||||||| | |||||||||| ||  |||||||||||||||    
T  44336249 gcagttaactgtcgaggaattagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactgccgag 44336323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 462
Target Start/End: Complemental strand, 51290058 - 51289960
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccga 462  Q
    ||||||||| | |||| | ||||||||||||||||   ||| |||| |||| |||| |||||||||| | |||||||||| ||  |||||| |||||||    
T  51290058 agtaaaataagattttaccccctcggcagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaaacctcggtagttagctgccga 51289960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 3941228 - 3941147
Alignment:
Q  384 cctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||| ||||||||||| |||| |||| | |||| || ||||||||||   |||||||||| ||  |||||||||||||||||    
T  3941228 cctctgcagttaactgccgaggaattcataaactggctgcagttaactaccgaggaaaacttcggtagttaactgccgagga 3941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 9711749 - 9711648
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||||| || || ||||||||||| |||| ||||  ||| ||||  ||||||||| | |||||||||| ||   ||||||||||||||    
T  9711749 agtaaaatacgattttgccccatcagcagttaactgccgaggaattagaaatccggtcgcagttaactgccgaggaaaacctcgggagttaactgccgag 9711650  T
Q  464 ga 465  Q
    ||    
T  9711649 ga 9711648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 465
Target Start/End: Complemental strand, 23359435 - 23359346
Alignment:
Q  376 ttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||| |||||||||||||| || |||| ||||  ||| |||| ||||||||||   |||||||||| ||  |||| ||||||||||||    
T  23359435 ttttgccccctcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccgagga 23359346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 6557909 - 6557989
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||||||||||| |||| ||||  |||  ||| |||||||||| | |||||||||  ||  |||||||||||||||    
T  6557909 ccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgccgaggaaaatctcggtagttaactgccgag 6557989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 14172048 - 14172116
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggca 391  Q
    |||||||||||||||||| || |||||| | || | ||| |||||||||| | |||||| |||||||||    
T  14172048 gaaaattgttgttgacacattccataaggctgaagcacacaagtaaaatacgcttttgccccctcggca 14172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 45943799 - 45943723
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||| ||||||| |||| | ||||||| || |||||||   |||||||||| ||  |||||||||||||||||    
T  45943799 gcagttaattgtcgaggaattcataaaccggctgtagttaactaccgaggaaaacttcggtagttaactgccgagga 45943723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 51337587 - 51337539
Alignment:
Q  388 ggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcga 436  Q
    |||||||||||| |||| |||| ||||||||| |||||||||| |||||    
T  51337587 ggcagttaactgccgaggaattaaaaaaccggctgcagttaactgtcga 51337539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 514
Target Start/End: Complemental strand, 12434 - 12335
Alignment:
Q  416 ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctgctacaaatctggtagaagct-ctctcatccattattcatctca 514  Q
    |||| |||||||||| | ||| |||||| ||  |||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  12434 ccggctgcagttaactgccgatgaaaacctcggtagttaactgccgaggatcttctgctacaaatctggcagaatctactctcatccattattcatctca 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 449 - 514
Target Start/End: Complemental strand, 18912 - 18847
Alignment:
Q  449 tagttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  18912 tagttaactgtcgaggatcttctgctacaaatctggcagaagctttctcatccattattcatctca 18847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 417
Target Start/End: Original strand, 16345 - 16439
Alignment:
Q  322 tgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    |||||||| |||||||||| ||||||||||| || | ||| | | ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  16345 tgaaaattattgttgacacatttcataagactgaggcacacatg-aaaatatgtttttgccccctcggtagttaactgtcgagaaattgaaaaacc 16439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 450 - 514
Target Start/End: Original strand, 857 - 921
Alignment:
Q  450 agttaactgccgaggatcttctgctacaaatctggtagaagctctctcatccattattcatctca 514  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||    
T  857 agttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 578 - 431
Alignment:
Q  318 tttttgaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaacc 417  Q
    ||||||| ||||| |||| |||| ||| ||||||| ||   |||  ||||||||| | |||||||||||||||||||||||| |||  |||| | || ||    
T  578 tttttgagaattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaattaataatcc 479  T
Q  418 ggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    || |||||||||| |||||||||||| ||   |||||||| |||||||    
T  478 ggctgcagttaactgtcgaggaaaacctcgggagttaactaccgagga 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 3860 - 3939
Alignment:
Q  363 aagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaac 443  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||| ||||| ||| |||||||||| | ||||||||||    
T  3860 aagtaaaatat-tttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaac 3939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 465
Target Start/End: Original strand, 54558 - 54641
Alignment:
Q  382 tccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||||||| ||||||||| | |  ||||| |||||| |||||||||| | ||||||||||||| | ||||||||||||||||    
T  54558 tccctcggcaattaactgtcaaaattttgaagaaccggctgcagttaactgccgaggaaaacatcgacagttaactgccgagga 54641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 17449 - 17348
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| |||| ||||  ||| |||| |||||||||| | |||||||| | ||  |||||||||||||||    
T  17449 agtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgccgag 17350  T
Q  464 ga 465  Q
    ||    
T  17349 ga 17348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 16040 - 15952
Alignment:
Q  377 tttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||||||||||||||| |||| ||||  ||| || | |||||||||| | |||||||||| ||  ||||||||| |||||||    
T  16040 tttgctccctcggcagttaactgccgaggaatttgaaatccagctgcagttaactgccgaggaaaacctcggtagttaacttccgagga 15952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 506
Target Start/End: Complemental strand, 36611 - 36486
Alignment:
Q  386 tcggcagttaactgtcgagaaattgaaaaa-ccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgaggatcttctg--ctac-aaatc 481  Q
    |||||||||||||| ||| |  |||||||| |||| |||| ||||| | |||||||||| ||  |||||||||||||||||||| |||  |||| |||||    
T  36611 tcggcagttaactgccgaaattttgaaaaatccggctgcaattaactgccgaggaaaacctcggtagttaactgccgaggatctcctgccctacaaaatc 36512  T
Q  482 tggtagaagct-ctctcatccattat 506  Q
    ||| |||| || ||||||||||||||    
T  36511 tggcagaatctcctctcatccattat 36486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 11849 - 11742
Alignment:
Q  323 gaaaattgttgttgacacgtttcataagaccgatgtacataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatg 422  Q
    |||||||| ||||||||| ||| ||||||  ||  |||| ||||||||||   |||||| || ||||||||||||||  ||  |||| ||||||||| ||    
T  11849 gaaaattgctgttgacacattttataagattgagatacacaagtaaaatacacttttgccccttcggcagttaactgctgaagaattcaaaaaccggctg 11750  T
Q  423 cagttaac 430  Q
    ||||||||    
T  11749 cagttaac 11742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 440
Target Start/End: Original strand, 15704 - 15754
Alignment:
Q  390 cagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaa 440  Q
    ||||||||||||||| |||| ||||||||| |||||||||| | |||||||    
T  15704 cagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgaggaa 15754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 20185 - 20109
Alignment:
Q  389 gcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    ||||||||||| |||| |||| ||||| ||| | |||||||| |||||||||| | ||  ||||| |||||||||||    
T  20185 gcagttaactgccgaggaattcaaaaatcggctacagttaactgtcgaggaaatcctcggtagtttactgccgagga 20109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 232542 - 232600
Alignment:
Q  383 ccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaa 441  Q
    |||||||||||||||||||||| |||| |||| |||  |||||||||| | ||||||||    
T  232542 ccctcggcagttaactgtcgaggaattaaaaatccgactgcagttaactgccgaggaaa 232600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 465
Target Start/End: Original strand, 806 - 907
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| | ||||||||||||||||| | || ||||  |||  ||| || ||||||| | |||||||||| ||  |||||||||||||||    
T  806 agtaaaatacgattttaccccctcggcagttaactgcctaggaatttgaaattcggctgtagttaactgccgaggaaaacctcggtagttaactgccgag 905  T
Q  464 ga 465  Q
    ||    
T  906 ga 907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 465
Target Start/End: Complemental strand, 4498 - 4397
Alignment:
Q  364 agtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgag 463  Q
    ||||||||| | |||| ||||||||||||||||||| |||| ||||  ||  |||| |||||||||    |||||||| | ||  |||||||||||||||    
T  4498 agtaaaatacgattttactccctcggcagttaactgccgaggaatttgaactccggctgcagttaaataccgaggaaatcctcggtagttaactgccgag 4399  T
Q  464 ga 465  Q
    ||    
T  4398 ga 4397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 465
Target Start/End: Original strand, 22390 - 22479
Alignment:
Q  376 ttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactgccgagga 465  Q
    |||||| ||||||||||||||||| |||| ||||  |||  ||| |||||||||| |  ||||||||  ||  |||||||||||||||||    
T  22390 ttttgccccctcggcagttaactgccgaggaatttgaaattcggctgcagttaactgctgaggaaaatctcggtagttaactgccgagga 22479  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 463
Target Start/End: Complemental strand, 7407 - 7303
Alignment:
Q  359 acataagtaaaatatgtttttgctccctcggcagttaactgtcgagaaattgaaaaaccggatgcagttaacagtcgaggaaaacatcaatagttaactg 458  Q
    |||| ||||||||||||||||||  ||| | ||||||| ||  ||| |||| ||||||||| |||| | ||| | |||| ||||| ||  ||||||||||    
T  7407 acatgagtaaaatatgtttttgcctccttgacagttaattgctgaggaattcaaaaaccggctgcaatcaactgccgagaaaaacctcggtagttaactg 7308  T
Q  459 ccgag 463  Q
    |||||    
T  7307 ccgag 7303  T

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