View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_high_34 (Length: 246)
Name: NF10317_high_34
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 43219744 - 43219508
Alignment:
| Q |
1 |
tttctccttctcattcttctctcagcattaagctatatcatgtctatcacaatgacaggatcaagcttactctttctacctaattcactcttgcacaccg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43219744 |
tttctccttctcattcttctctcagcattaagctatatcatgtctatcacaatgacaggatcaagcttactctttctacctaattcactcttgcacacca |
43219645 |
T |
|
| Q |
101 |
aaaccaaattccctattatatcaaattctgttaagcctttcaagcagctacaaaacccttcatcatatgataattcttcaaggttttcgccctcgctctc |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
43219644 |
aaaccaaattccctattatatcaaattctgttaagcctttcaagcagctacaaaacccttcatcatatgataattcttcaaggtttttgccctcgctctc |
43219545 |
T |
|
| Q |
201 |
tctcaccggcataaggagaagaacccgctattcttctc |
238 |
Q |
| |
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||||||||||||||||||||||| |||| ||||||||| |
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| T |
43219544 |
tctcaccggcataaggagaagaa-ccgccattcttctc |
43219508 |
T |
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