View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_high_38 (Length: 241)
Name: NF10317_high_38
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_high_38 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 223
Target Start/End: Original strand, 1599600 - 1599816
Alignment:
| Q |
7 |
gtcccaatcagaatccctctaaaatgttatcaaacccacaatcttacattccttcaattttaactaaaaatctttgttagtaaacaatatatcgtgtgcc |
106 |
Q |
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| T |
1599600 |
gtcccaatcagaatccctctaaaatgttatcaaacccacaatcttacattccttcaattttaactaaaaatctttgttagtaaacaatatatcgtgtgcc |
1599699 |
T |
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| Q |
107 |
aattcaatgaaaactaaatcttgtttatttttattttgtactcttaagctaccttcatatataattcaagtcaagaaaggattcaataggtatcttgcat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
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| T |
1599700 |
aattcaatgaaaactaaatcttgtttatttttattttgtactcttaagctaccttcatatataattgaagtcaagaaagtattcaataggtatcttgcat |
1599799 |
T |
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| Q |
207 |
aacaagttaacaacttt |
223 |
Q |
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||||||||||||||||| |
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| T |
1599800 |
aacaagttaacaacttt |
1599816 |
T |
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