View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10317_low_10 (Length: 436)
Name: NF10317_low_10
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_low_10 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
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Alignment Details
Target: chr5 (Bit Score: 391; Significance: 0; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 20 - 422
Target Start/End: Original strand, 10558794 - 10559196
Alignment:
| Q |
20 |
aaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558794 |
aaggtcctggaccttgaaaagaatggagctcacaagagttttattaccgaatgtaatgcactaaaaaatattagacatcgaaatctggttaagattttaa |
10558893 |
T |
|
| Q |
120 |
cttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggat |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10558894 |
cttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaaactggttgcattcaaggat |
10558993 |
T |
|
| Q |
220 |
gatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgag |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558994 |
gatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgag |
10559093 |
T |
|
| Q |
320 |
caattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctcat |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10559094 |
caattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctcat |
10559193 |
T |
|
| Q |
420 |
ctg |
422 |
Q |
| |
|
||| |
|
|
| T |
10559194 |
ctg |
10559196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 20 - 411
Target Start/End: Complemental strand, 19606182 - 19605791
Alignment:
| Q |
20 |
aaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaa |
119 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
19606182 |
aaggtcctgaaccttgaaaagaagggagctcacaagagttttattactgaatgtaatgctctcaaaaatattagacatcgaaatttagttaagattttaa |
19606083 |
T |
|
| Q |
120 |
cttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggat |
219 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| | ||| |
|
|
| T |
19606082 |
cttgttgttctagtattgataacaaaggtctagaattcaaagctctagtttttgagtacatgagaaatggaagcttagaacaatggttgcatcccgggac |
19605983 |
T |
|
| Q |
220 |
gatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgag |
319 |
Q |
| |
|
||||||| ||| || |||||| ||||| | || | |||||| | |||||| || | |||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
19605982 |
aatgaatgcagatcatccaagaacattgaagtttgagcaaagattaaatatccttgtcgatgtttcttctgcattacattaccttcatcatgaatgtgag |
19605883 |
T |
|
| Q |
320 |
caattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || | ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19605882 |
caattggtccttcattgtgatctaaagccaagcaatgtccttattgacgacgatatcgttgcacatgtgagtgattttggcatagcaagact |
19605791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 36 - 411
Target Start/End: Complemental strand, 10763434 - 10763059
Alignment:
| Q |
36 |
aaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtat |
135 |
Q |
| |
|
|||| |||||||||| ||||||||| ||| |||||||||||||| ||||||||| ||| || ||| | |||||||||||||| ||||||||||||| |
|
|
| T |
10763434 |
aaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatattcaacaccggaatttagttaagattttaacatgttgttctagtac |
10763335 |
T |
|
| Q |
136 |
tgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaa |
235 |
Q |
| |
|
|||||| |||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| | ||| |||| | |||| | |||| |||| |
|
|
| T |
10763334 |
tgattataaaggtcaagaatttaaagctctggtttttgattacatgaaaaatggaagcttagaacgatggctgcaccctaggaatttaaatgcagagact |
10763235 |
T |
|
| Q |
236 |
ccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcatt |
335 |
Q |
| |
|
|||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10763234 |
ccaacaacattggatcttgatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcatt |
10763135 |
T |
|
| Q |
336 |
gtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10763134 |
gtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggaatagcaagact |
10763059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 19 - 423
Target Start/End: Original strand, 9824991 - 9825379
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
||||||| || || |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9824991 |
aaaggtcttgaactttgaaaagaagggagctcacaagagttttattaccgaatgtaatgaactcaaaaatattagacatcgaaatttggttaagatttta |
9825090 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaat-ggaagcttagaaagctggttgcattcaagg |
217 |
Q |
| |
|
|| |||| ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||| || ||||| |
|
|
| T |
9825091 |
acatgtttttctagtatcgattacaaagggcaagaattcaaagctctagtttttgagtacatgcaaaatgggaagcttagaacaatggttgaatccaagg |
9825190 |
T |
|
| Q |
218 |
atgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtg |
317 |
Q |
| |
|
|| |||||||||||| || ||| ||||||||||| |||||||| ||||||||||||||||||||| |||||||| || |||| |
|
|
| T |
9825191 |
atagagaatgtagagcatcctagaacattggatcttgatcaaagattgaatatcattattgatgttg-----------------cttcatcgtgattgtg |
9825273 |
T |
|
| Q |
318 |
agcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctc |
417 |
Q |
| |
|
||||||| |||||||||||||| |||||||||| ||| ||||| |||||||||| | |||| |||| | ||||||||||||||| |||||||| ||||| |
|
|
| T |
9825274 |
agcaattaatccttcattgtgatataaagccaagtaatatccttgttgatgaagatattgtttctcaggcgagtgattttggcattgcaagacttgtctc |
9825373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 20 - 418
Target Start/End: Complemental strand, 10588747 - 10588349
Alignment:
| Q |
20 |
aaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaa |
119 |
Q |
| |
|
||||| ||| ||||| ||||||| |||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||| |||||||||| |
|
|
| T |
10588747 |
aaggttctgaaccttaaaaagaagggagctgataagagttttattgccgaatgtaatgcactcaagaatgttagacatcgaaatttggccaagattttaa |
10588648 |
T |
|
| Q |
120 |
cttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggat |
219 |
Q |
| |
|
| ||||||||| ||| |||||| |||||||| ||||| |||||| |||||||||| ||||||||||||||||| |||||| ||| | ||| || ||| |
|
|
| T |
10588647 |
catgttgttctggtactgattataaaggtcaagaatttaaagctttagtttttgattacatgaaaaatggaagtttagaacaatggcttcatccatggaa |
10588548 |
T |
|
| Q |
220 |
gatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgag |
319 |
Q |
| |
|
||||| |||||| |||||| | ||||| ||| ||| ||| | ||||||| ||| ||| ||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
10588547 |
tgtgaattcagagcatccaagaacgttggaccttgttcatagattaaatatcactatcgatattgcttctgcactacattatcttcatcatgaatgtgag |
10588448 |
T |
|
| Q |
320 |
caattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||||| |||||| |||| || |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10588447 |
caggtggtccttcattgtgatataaagccaagcaacgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
10588349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 20 - 418
Target Start/End: Original strand, 7192897 - 7193295
Alignment:
| Q |
20 |
aaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaa |
119 |
Q |
| |
|
|||||| || ||||| ||||||| ||||||| ||||||||| ||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
7192897 |
aaggtcatgaaccttcaaaagaagggagctcacaagagtttcattgctgaatgtaatgcactaaaaaatattagacatcgaaatttggttaagattttga |
7192996 |
T |
|
| Q |
120 |
cttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggat |
219 |
Q |
| |
|
| |||||||| |||| |||||||||||||| ||||| |||||| |||| |||||||||||||| || |||||||||||| ||| | ||| | | ||| |
|
|
| T |
7192997 |
catgttgttccagtacagattacaaaggtcaagaatttaaagctttagtctttgaatacatgaacaacggaagcttagaacaatggctacatccta-gat |
7193095 |
T |
|
| Q |
220 |
ga-tgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| ||||||||||| | | |||| | ||||| ||| |||||||| |||||||| | ||||| |||| | || ||||||||| ||||||| |||||||| |
|
|
| T |
7193096 |
cagtgaatgtagagaatcaaagaacgttggaccttgatcaaagattgaatatcgctgttgatattgcctttgtattacattaccttcatcttgaatgtga |
7193195 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
||||| | || |||||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7193196 |
gcaatcgatcattcattgtgatctaaagccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
7193295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 418
Target Start/End: Original strand, 10564918 - 10565317
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
|||||||||| |||| ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||| |||| |||||| | |||||| ||||| |
|
|
| T |
10564918 |
aaaggtcctgaacctccaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaaatattcgacaccgaaatttagttaaggtttta |
10565017 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| |||||||| |||| |||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||| | || |
|
|
| T |
10565018 |
acctgttgttcaagtacagattacaaaggtcaagaatttaaagctctggtttttgagtacatgaaaaatggaagcttagatcaatggttgcatcctgaga |
10565117 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| | |||| ||| | |||| | ||||||| || ||| ||| | | || ||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10565118 |
ttttaaatgcagaacccccaacaacattggactttgctcatagattatacattattatcgatgttgcttctgcattacattatcttcatagagaatgtga |
10565217 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||| |||| || |||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10565218 |
agaattggtcattcattgtgatctaaagccaagcaatatccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagactcgtctca |
10565317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 418
Target Start/End: Complemental strand, 10741017 - 10740618
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
||||||| || |||| ||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| |
|
|
| T |
10741017 |
aaaggtcttgaacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactcaaaaatattagacaccgaaatttagttaagattttg |
10740918 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
10740917 |
acatgttgttctagtacagattacaaaggtcaaacttttaaagctcttgtttttgattacatgaaaaatggaagcttagaacaatggttgcatcttgaga |
10740818 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| | |||| ||| || |||||| ||||||| ||| ||| ||| | || ||||| | ||||| || ||||||||||||||||||| | ||||||||| |
|
|
| T |
10740817 |
ttttaaatgcagatcatccaagaacattggaccttggtcatagattaaacatcatgaacgatgtcgccactgcattacattatcttcaccaagaatgtga |
10740718 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10740717 |
acaattggtccttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
10740618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 36 - 417
Target Start/End: Original strand, 10611618 - 10611999
Alignment:
| Q |
36 |
aaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtat |
135 |
Q |
| |
|
|||| |||||||||| ||||||||| ||| |||||||||||||| ||| ||||||||| |||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
10611618 |
aaaacaatggagctcacaagagtttcattgttgaatgtaatgcactaaaatttattagacaccgaaatttagttaagattttaacatgttgttctagtac |
10611717 |
T |
|
| Q |
136 |
tgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaa |
235 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||||||| | | | | | |||| |||||| |
|
|
| T |
10611718 |
agattacaaaggtcaagaatttaaagccctagtttttgattacatgaaaaatggaagcttagaacaatggttgcatcccaaggttttaaatgaagagcat |
10611817 |
T |
|
| Q |
236 |
ccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcatt |
335 |
Q |
| |
|
|| | ||||||| || | ||| ||| | || |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10611818 |
acagcaacattggacctcagtcatagattaaacatcattatggatgttggttctgcattacattatcttcataatgaatgtgagcaattggtccttcatt |
10611917 |
T |
|
| Q |
336 |
gtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctc |
417 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| || | ||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10611918 |
gtgatataaagccaagcaatgtcctacttgatgatgatatggttgcacatgtgagtgattttggcatagcaagacttgtctc |
10611999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 19 - 417
Target Start/End: Original strand, 10604643 - 10605041
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
|||||||||| |||| ||||||| ||||| | ||||| ||| ||| ||||||||||||||||||| ||| ||||| || ||| | ||| | ||||| |
|
|
| T |
10604643 |
aaaggtcctgaacctccaaaagaagggagcacacaagaatttcattgttgaatgtaatgcactcaaaactataagacaccggaatttagttcaagtttta |
10604742 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| | || |
|
|
| T |
10604743 |
acatgttgttctagtacagattacaaaggtcaagaatttaaagctctagtttttgattacatgaaaaatggaagcttagaacaatggttgcatcctgaga |
10604842 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| | |||| ||||| |||| | | ||||| ||| | ||||| | || |||||| ||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
10604843 |
ttttaaatgcagagcctccaacaacgttggaccttggtaaaagatttaacatcatttttgatgttgcttctgcattgcattatcttcatcaagaatgtga |
10604942 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctc |
417 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10604943 |
gcaattagtcattcattgtgatctaaagccaagcaatgtcctacttgatgatgatatggttgctcatgtgagtgattttggcatagcaagactggtctc |
10605041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 30 - 418
Target Start/End: Complemental strand, 10747322 - 10746934
Alignment:
| Q |
30 |
accttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttc |
129 |
Q |
| |
|
||||| ||||||| ||||||| ||||||||| ||| |||||||||| |||||| || |||||||| |||||| | |||||||||||||| |||||||| |
|
|
| T |
10747322 |
accttcaaaagaagggagctcacaagagtttcattgttgaatgtaatgtactcaagaacattagacaccgaaatttagttaagattttaacgtgttgttc |
10747223 |
T |
|
| Q |
130 |
tagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgta |
229 |
Q |
| |
|
|||||| |||||||||| |||||| || ||||||||||||||| | ||||| |||||||||||||||||| ||||||||| | | | | |||| | |
|
|
| T |
10747222 |
tagtatagattacaaagttcaggagtttaaagctctagttttttattacataaaaaatggaagcttagaacaatggttgcatcctgagtttttaaatgaa |
10747123 |
T |
|
| Q |
230 |
gagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtcc |
329 |
Q |
| |
|
||||| |||| | | || || ||| || ||| | || |||||||| ||||||||||| |||||||||||||||| | ||||||||||||||| ||| |
|
|
| T |
10747122 |
gagcatccaaaaacgttagaccttggccacagattaaacatcattatcgatgttgcttcaacattacattatcttcaccaagaatgtgagcaattagtca |
10747023 |
T |
|
| Q |
330 |
ttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||| |||||||| |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||| ||| |||||| |
|
|
| T |
10747022 |
ttcactgtgatctcaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgactgattttggcatagcaaaacttgtctca |
10746934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 36 - 407
Target Start/End: Complemental strand, 10217050 - 10216679
Alignment:
| Q |
36 |
aaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtat |
135 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| ||||||| ||||||||||||| |
|
|
| T |
10217050 |
aaaagaatggagctagcaagagttttattgttgaatgtaatgcactcaaaaacattagacaccgaaactcagttaaggttttaacatgttgttctagtac |
10216951 |
T |
|
| Q |
136 |
tgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaa |
235 |
Q |
| |
|
| ||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||| ||||||||| | ||| | ||| |||||| |
|
|
| T |
10216950 |
aaactacaaaggtcaagaatttaaagctctagttttttattacatgaaaaatggaagcttagaacaatggttgcatcctgagattttaaattcagagcat |
10216851 |
T |
|
| Q |
236 |
ccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcatt |
335 |
Q |
| |
|
|||| | ||||||| ||| ||| || | || |||||||| ||||||||||| |||||||||||||| |||| |||||||||||||||| | |||||| |
|
|
| T |
10216850 |
ccaaaaacattggaccttggtcataggttaaacatcattatcgatgttgcttcggcattacattatctgcatcaagaatgtgagcaattgattattcatt |
10216751 |
T |
|
| Q |
336 |
gtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaa |
407 |
Q |
| |
|
|||||||||||||||||||||| ||| | |||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10216750 |
gtgatctaaagccaagcaatgttcttctgaatgatgacatggttgctcatgtgagtgattttggcatagcaa |
10216679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 19 - 411
Target Start/End: Complemental strand, 9836646 - 9836254
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
|||||| ||| |||| ||||||| ||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||| || || |
|
|
| T |
9836646 |
aaaggttctgaacctcaaaaagaagggagctcataagagttttattgctgaatgtaatgcactcaaaaatattagacatcgaaatttggtcaaggttata |
9836547 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| |||||||||||||||||||| |||||| ||||| |||||| |||||||||| |||||||||||||||||||||||| ||| | || | ||| |
|
|
| T |
9836546 |
acatgttgttctagtattgattataaaggtggagaatttaaagctttagtttttgattacatgaaaaatggaagcttagaacaatggctttatccctgga |
9836447 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
|| || |||| | || ||| ||||| | ||| ||||||||| |||||| |||||| |||||||||||||||||||||||||| | |||||||| |
|
|
| T |
9836446 |
cagtggattcagagtatcctagaacattgaaccttgttcaaagactaaatatctccattgatattgcttctgcattacattatcttcattgtgaatgtga |
9836347 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
|||| ||||| ||||||||||| | ||||||||||| ||||| | ||||| ||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
9836346 |
gcaagtggtcattcattgtgatatcaagccaagcaacatccttctcgatgataacatggttgctcacgtgagtgattttggcatagcaagact |
9836254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 19 - 417
Target Start/End: Complemental strand, 10717258 - 10716860
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
||||||| || |||| ||||||| ||||||| ||||||||| ||| |||||||||||||| |||||||| ||||| |||||||| || ||||| ||| |
|
|
| T |
10717258 |
aaaggtcttgaacctcaaaaagaagggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatatcagacaccgaaatctagtgaagatatta |
10717159 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
10717158 |
acatgttgttctagtacagattacaaaggtcaaacttttaaagctctagtttttgattacatgaaaaatggaagcttagaacaatggttgcatcttgaga |
10717059 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| | |||| ||| || |||||| ||||||| ||| ||| ||| | || ||||| || ||||| || ||||||||||||||||||| | ||||||||| |
|
|
| T |
10717058 |
ttttaaatgcagatcatccaagaacattggaccttggtcatagattaaacatcatgatcgatgtcgccactgcattacattatcttcaccaagaatgtga |
10716959 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctc |
417 |
Q |
| |
|
||||| || ||||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||| ||| ||||| |
|
|
| T |
10716958 |
acaattaatcattcattgtgatcttaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgactgattttggcatagcaaaacttgtctc |
10716860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 36 - 418
Target Start/End: Complemental strand, 11048958 - 11048576
Alignment:
| Q |
36 |
aaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtat |
135 |
Q |
| |
|
|||| ||||||||| ||||||||| ||| |||||||||||||||||||| |||||||| ||||| | |||||| ||||||| ||||||||||||| |
|
|
| T |
11048958 |
aaaacaatggagctagcaagagtttcattgttgaatgtaatgcactcaaaaacattagacaccgaaacttagttaaggttttaacctgttgttctagtac |
11048859 |
T |
|
| Q |
136 |
tgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaa |
235 |
Q |
| |
|
|||||||||||| | ||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||| ||| | ||| | ||| |||||| |
|
|
| T |
11048858 |
agattacaaaggtgaagaatttaaagcactagtttttgattacatgaaaaatggaagcttagaacaatggttacatcctgagattttaaattcagagcat |
11048759 |
T |
|
| Q |
236 |
ccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcatt |
335 |
Q |
| |
|
|||| | ||||||| ||| | | || | || |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| | |||||| |
|
|
| T |
11048758 |
ccaaaaacattggaccttggtgataggttaaacatcattatcgatgttgcttctgcattacattatctgcatcaagaatgtgagcaattgattattcatt |
11048659 |
T |
|
| Q |
336 |
gtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||||||||||||||| ||||| ||| || | || |||| |||||||||||||||||||||||||| |||| ||| |||||| |
|
|
| T |
11048658 |
gtgatctaaagccaagtaatgttcttcttaacgacgacatggttgctcatgtgagtgattttggcattgcaaaacttgtctca |
11048576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 418
Target Start/End: Original strand, 10580895 - 10581286
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
||||||| || |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||| | || ||| || || |
|
|
| T |
10580895 |
aaaggtcttgaacctccaaaagaaaggagctcacaagagttttattgttgaatgtaatgcactcaaaaatattagacaccaaaatttagtcaaggttcta |
10580994 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| ||||||||||||| |||||||||| || ||||| |||||| |||||||| | |||||||||||||||||||||||| ||||||||| | || |
|
|
| T |
10580995 |
acatgttgttctagtacaaattacaaaggccaagaatttaaagctttagttttttattacatgaaaaatggaagcttagaacaatggttgcatcctcaga |
10581094 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| | | || ||| | | || | ||||| | ||| ||| ||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10581095 |
t-ttaagtgcagaacctctaacaacattgaaccttggtcatagattaaacatcattatggatgttgcttctgcattacattatcttcatcgagaatgtga |
10581193 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| ||| ||||||| |||| || |||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
10581194 |
gcaattggtccttcgttgtgatctaaagccaagca---cacttcttgatgatgaca----tggtcatgtgagtgattttggcacagcaagacttgtctca |
10581286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 418
Target Start/End: Complemental strand, 10652520 - 10652121
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
|||||||||| ||||| |||| || ||| ||| |||||| || || |||||||||||||| |||||||| || ||| ||||| |||||||| |||| |
|
|
| T |
10652520 |
aaaggtcctgaaccttcaaaaaaagggatctcacaagagcttcgttgttgaatgtaatgcactaaaaaatatgaggcatagaaatttggttaaggttttg |
10652421 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| |||||||| |||| |||||||||||||| || || || ||| |||| |||||||||||||| || |||| | ||||| ||| | ||| || | | |
|
|
| T |
10652420 |
acatgttgttcgagtaccgattacaaaggtcaagagtttaaggctttagtgtttgaatacatgaacaacggaaacctagaacaatggctacatccaggta |
10652321 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| ||||||| || | | |||| ||||| ||| ||||| |||||||||||||| |||| ||||||||| ||||||||| ||||||| |||||||| |
|
|
| T |
10652320 |
taatgaatgcagggattcaaagaatgttggaccttgatcaacgactgaatatcattgttgacattgcttctgtattacattaccttcatcatgaatgtga |
10652221 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10652220 |
gcaagcggtcattcattgtgatctaaagccaagtaatgtccttcttgatgacgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
10652121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 19 - 418
Target Start/End: Complemental strand, 10660403 - 10660004
Alignment:
| Q |
19 |
aaaggtcctggaccttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagatttta |
118 |
Q |
| |
|
|||||| ||| ||||| |||| || ||||||| |||||| || ||| |||||||||||||| |||||||| || ||| ||||| |||| ||| |||| |
|
|
| T |
10660403 |
aaaggttctgaaccttcaaaataagggagctcacaagagcttcattgttgaatgtaatgcactaaaaaatatgaggcatagaaatttggtcaaggttttg |
10660304 |
T |
|
| Q |
119 |
acttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaagga |
218 |
Q |
| |
|
|| |||||||| |||| |||||||||||||| || || || ||| |||| |||||||||||||| ||||||||| ||||| ||| | ||| || | | |
|
|
| T |
10660303 |
acatgttgttcaagtacagattacaaaggtcaagagtttaaggctttagtgtttgaatacatgaacaatggaagcctagaacaatggctacatccaggta |
10660204 |
T |
|
| Q |
219 |
tgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtga |
318 |
Q |
| |
|
| ||||||| || | | |||| ||||| ||| ||||| |||||||||||||| |||| ||||| || ||||||||| ||||||| |||||||| |
|
|
| T |
10660203 |
taatgaatgcagggattcaaagattgttggaccttgatcaacgactgaatatcattgttgacattgctagtgtattacattaccttcatcacgaatgtga |
10660104 |
T |
|
| Q |
319 |
gcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|||| |||| |||||||||||||||||||||| ||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10660103 |
gcaagcggtcattcattgtgatctaaagccaagtaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
10660004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 9850985 - 9850838
Alignment:
| Q |
52 |
caagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcag |
151 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||| || |
|
|
| T |
9850985 |
caagagttttattacggaatgtaatgccctcaaaa-tattagacatcgaaatttggttaagattttaacttcttgttctagtatcgattacaaagggcat |
9850887 |
T |
|
| Q |
152 |
gaattc-aaagctctagtttttgaatacatgaaaaatggaagcttagaa |
199 |
Q |
| |
|
|||||| ||||||||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
9850886 |
gaattcaaaagctctagttttttagtacatgataaatggaagcttagaa |
9850838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 30 - 211
Target Start/End: Original strand, 10550686 - 10550867
Alignment:
| Q |
30 |
accttgaaaagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttc |
129 |
Q |
| |
|
||||| ||||||| |||| || ||||||||| ||| | |||||||||||||| ||||||||||| || ||||||| ||||| ||||| ||||||||||| |
|
|
| T |
10550686 |
accttaaaaagaagggagttcacaagagtttcattgctgaatgtaatgcactaaaaaatattaggcacagaaatctagttaaaattttgacttgttgttc |
10550785 |
T |
|
| Q |
130 |
tagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcat |
211 |
Q |
| |
|
|| | ||||||||||| || || |||||||| || ||||| ||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
10550786 |
cagcacagattacaaaggaagtgagtttaaagctcttgtatttgagtacatgagaaatggaaacttagaaaattggttgcat |
10550867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 9849983 - 9849930
Alignment:
| Q |
223 |
gaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattat |
276 |
Q |
| |
|
|||||||||||| |||| | |||| |||||| |||||||| ||||||||||||| |
|
|
| T |
9849983 |
gaatgtagagcatccaacaacatttgatcttgatcaaagattgaatatcattat |
9849930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 35754837 - 35754910
Alignment:
| Q |
101 |
aatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttga |
174 |
Q |
| |
|
||||| || |||||||||||||||||||| ||| ||||||| || ||| | || ||||||||| | |||||||| |
|
|
| T |
35754837 |
aatcttgtcaagattttaacttgttgttcaagtgttgattataatggtgaagatttcaaagctattgtttttga |
35754910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 160; Significance: 4e-85; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 47 - 418
Target Start/End: Original strand, 12899489 - 12899860
Alignment:
| Q |
47 |
gctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaag |
146 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||||||| ||| |||| |||||| |||||||| ||||||| ||||||||||| | ||||||||| |
|
|
| T |
12899489 |
gctcacaagagtttcattttagaatgtaatgcactcaaaaacattcgacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaag |
12899588 |
T |
|
| Q |
147 |
gtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaaccaagagcatt |
246 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | || |||||| | | | |||| | |||| |
|
|
| T |
12899589 |
gtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagcttagaacaatggttacatcccgagactttgaatgcaaatcctccaacaacatt |
12899688 |
T |
|
| Q |
247 |
ggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaag |
346 |
Q |
| |
|
| | ||| ||| ||| | || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| |
|
|
| T |
12899689 |
gaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattagtctttcattgtgatataaag |
12899788 |
T |
|
| Q |
347 |
ccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12899789 |
ccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
12899860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 44 - 418
Target Start/End: Original strand, 12948560 - 12948934
Alignment:
| Q |
44 |
ggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattaca |
143 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||||| | || ||| |
|
|
| T |
12948560 |
ggagctcacaagagtttcattgttgaatgtaatgcactaaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaataaca |
12948659 |
T |
|
| Q |
144 |
aaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaaccaagagc |
243 |
Q |
| |
|
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | || |||||| | | | |||| | | |
|
|
| T |
12948660 |
aaggccaagaatttaaagctctagtttttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaac |
12948759 |
T |
|
| Q |
244 |
attggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatcta |
343 |
Q |
| |
|
|||| | ||| || ||| | || |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
12948760 |
attgaaccttcgtcgtagattaaacatcattatcgatgttgcttctgcattacattatcttcatcgataatgtgagcaattagtccttcattgtgatcta |
12948859 |
T |
|
| Q |
344 |
aagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12948860 |
aaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
12948934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 44 - 418
Target Start/End: Original strand, 12932195 - 12932569
Alignment:
| Q |
44 |
ggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattaca |
143 |
Q |
| |
|
||||||| ||||||||| ||| |||||||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||| | |||||| |
|
|
| T |
12932195 |
ggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaattaca |
12932294 |
T |
|
| Q |
144 |
aaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaaccaagagc |
243 |
Q |
| |
|
||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||| | || |||||| | | | |||| | | |
|
|
| T |
12932295 |
aaggtcaagaatttaaagcactagtttttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaac |
12932394 |
T |
|
| Q |
244 |
attggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatcta |
343 |
Q |
| |
|
|||| | ||| ||| ||| | || ||||| || ||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
12932395 |
attgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagttaatccttcattgtgatcta |
12932494 |
T |
|
| Q |
344 |
aagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|| ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12932495 |
aaaccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
12932569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 44 - 418
Target Start/End: Original strand, 12957994 - 12958368
Alignment:
| Q |
44 |
ggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattaca |
143 |
Q |
| |
|
||||||| ||||||||| ||| |||||||| |||||||||||||||||||| |||||| |||||| | ||||||| ||||||||||| | |||||| |
|
|
| T |
12957994 |
ggagctcacaagagtttcattgttgaatgtaacgcactcaaaaatattagacaccgaaatttggttagggttttaacatgttgttctagcacaaattaca |
12958093 |
T |
|
| Q |
144 |
aaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagag-caaccaagag |
242 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||| | || |||||| ||| | |||| | |
|
|
| T |
12958094 |
aaggtcaagaatttaaagctctagtttttgaatacatggaaaatggaagcttagaacagtggttacatcctcaaattttgaatgc-gagtcctccaacaa |
12958192 |
T |
|
| Q |
243 |
cattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatct |
342 |
Q |
| |
|
||||| | ||| ||| ||| | || ||||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
12958193 |
cattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagttaatccttcactgtgatct |
12958292 |
T |
|
| Q |
343 |
aaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
12958293 |
aaagccaagcaatgtccttcttgatggtgacatggttgctcatgtgagtgattttggaatagcaagacttgtctca |
12958368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 68 - 418
Target Start/End: Original strand, 12907130 - 12907480
Alignment:
| Q |
68 |
gaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctag |
167 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||| | ||||||||||||| ||||| |||||||||| |
|
|
| T |
12907130 |
gaatgtaacgcactcaaaaatattagacacagaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctag |
12907229 |
T |
|
| Q |
168 |
tttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaa |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||| | | |||||| | | | |||| | ||||| | ||| || ||| | || |
|
|
| T |
12907230 |
tttttgaatacatgaaaaatggaagcttagaacagtggttacatcctgaaactttgaatgcaaatcctccaacaacattgaaccttggtcttagattaaa |
12907329 |
T |
|
| Q |
268 |
tatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttattgat |
367 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
12907330 |
catcatcatcgatgttgcttctgcattacattatcttcatcgagaatgtgagcagttaatcctccattgtgatctaaaaccaagcaatgtccttcttgat |
12907429 |
T |
|
| Q |
368 |
gaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|| |||| ||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
12907430 |
gatgacatggttgctcatttgagtgattttggcatagcaagacttgtctca |
12907480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 151; Significance: 9e-80; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 68 - 418
Target Start/End: Complemental strand, 17923672 - 17923322
Alignment:
| Q |
68 |
gaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctag |
167 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||||||| | ||||||||||||| ||||| |||||||||| |
|
|
| T |
17923672 |
gaatgtaacgcactcaaaaatattagacaccgaaatttggttaaggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctag |
17923573 |
T |
|
| Q |
168 |
tttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaa |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||| | || |||||| | | | |||| | ||||| | ||| ||| ||| | || |
|
|
| T |
17923572 |
tttttgaatacatgaaaaatggaagcttagaacagtggttacatcctgagactttgaatgcaaatcctccaacaacattgaaccttggtcatagattaaa |
17923473 |
T |
|
| Q |
268 |
tatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttattgat |
367 |
Q |
| |
|
||||| || ||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
17923472 |
catcatcatcgatgttgcttctgcattgcattaccttcatcgagaatgtgagcagttaatccttcattgtgatctaaaaccaagcaatgtccttcttgat |
17923373 |
T |
|
| Q |
368 |
gaagacaatgttgctcatgtgagtgattttggcatagcaagactcgtctca |
418 |
Q |
| |
|
|| |||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17923372 |
gatgacatggttgctcatgtgagtgattttggcatagcaagacttgtctca |
17923322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 99 - 418
Target Start/End: Original strand, 7264 - 7583
Alignment:
| Q |
99 |
gaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
||||| |||||| | ||||||| ||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7264 |
gaaatttggttagggttttaacatgttgttctagcacaaattacaaaggtcaagaatttaaagctctagtttttgaatacatgaaaaatggaagcttaga |
7363 |
T |
|
| Q |
199 |
aagctggttgcattcaaggatgatgaatgtagagcaaccaagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacat |
298 |
Q |
| |
|
| ||||| ||| | || |||||| | | | |||| | ||||| | ||| ||| ||| | || ||||| || ||||||||||||||||||||| |
|
|
| T |
7364 |
acagtggttacatcctgagactttgaatgcaaatcctccaataacattgaaccttggtcatagattaaacatcatcatcgatgttgcttctgcattacat |
7463 |
T |
|
| Q |
299 |
tatcttcatcgagaatgtgagcaattggtccttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttg |
398 |
Q |
| |
|
|| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||| |
|
|
| T |
7464 |
taacttcatcgagaatgtgagcaattaatacttcattgtgatctaaagccaagcaatgtccttcttgatgatgacatggttgctcatgtgagtgattttg |
7563 |
T |
|
| Q |
399 |
gcatagcaagactcgtctca |
418 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
7564 |
gcatagcaagacttgtctca |
7583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 38 - 407
Target Start/End: Complemental strand, 31467461 - 31467092
Alignment:
| Q |
38 |
aagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattg |
137 |
Q |
| |
|
||||| ||||||| ||||||||| || | ||||| ||||||||||||||||||||||| |||||| |||||||||||||||| | ||||| |||| | |
|
|
| T |
31467461 |
aagaaaggagctcacaagagtttccttgctgaatgcaatgcactcaaaaatattagacaccgaaatttggttaagattttaacaagctgttccagtacag |
31467362 |
T |
|
| Q |
138 |
attacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttagaaagctggttgcattcaaggatgatgaa-tgtagagcaac |
236 |
Q |
| |
|
||| ||||| ||| ||||| |||||||| ||||| || ||||||||||| |||||||||||||| |||||||| || || | | || || || | | |
|
|
| T |
31467361 |
atttcaaagatcaagaatttaaagctcttgttttcgagtacatgaaaaacggaagcttagaaagttggttgca-tccagcaaaagaaattgcaggtccag |
31467263 |
T |
|
| Q |
237 |
caagagcattggatcttaatcaaagactgaatatcattattgatgttgcttctgcattacattatcttcatcgagaatgtgagcaattggtccttcattg |
336 |
Q |
| |
|
|| | ||||| |||| ||||| | ||||| |||||||| |||||||| ||||| ||||||||||||| |||||| ||||| ||| ||||||| |
|
|
| T |
31467262 |
aaaaaacattgaatctagcacaaaggttaaatattattattgacgttgcttcggcatttcattatcttcatcatgaatgtcagcaacctgtcattcattg |
31467163 |
T |
|
| Q |
337 |
tgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaa |
407 |
Q |
| |
|
|||| ||||||| ||||| || ||| ||||||| | || |||||||||||||||||||||||||||| |
|
|
| T |
31467162 |
tgatttaaagcctagcaacgttcttcttgatgattctatggtagctcatgtgagtgattttggcatagcaa |
31467092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 28605566 - 28605696
Alignment:
| Q |
68 |
gaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctctag |
167 |
Q |
| |
|
||||| ||||||||||||| ||| | ||| | ||||| || ||||||||||| |||||||| ||||| |||||||| ||| | |||||||||||| ||| |
|
|
| T |
28605566 |
gaatgcaatgcactcaaaagtatccgtcataggaatcttgtcaagattttaacatgttgttcaagtatggattacaatggtaatgaattcaaagctttag |
28605665 |
T |
|
| Q |
168 |
tttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
||||||| |||||| |||||||||| ||||| |
|
|
| T |
28605666 |
tttttgagtacatggaaaatggaagtttaga |
28605696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 399
Target Start/End: Original strand, 28605825 - 28605894
Alignment:
| Q |
330 |
ttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttgg |
399 |
Q |
| |
|
||||||||||| |||||||||||||| | ||| || || | |||| ||||||||||||||||||||||| |
|
|
| T |
28605825 |
ttcattgtgatttaaagccaagcaatattcttcttcataatgacatggttgctcatgtgagtgattttgg |
28605894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 39875899 - 39875818
Alignment:
| Q |
330 |
ttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||| || |||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
39875899 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagccagact |
39875818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 39884022 - 39883941
Alignment:
| Q |
330 |
ttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||| || |||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
39884022 |
ttcattgtgatttaaaaccaagcaatgtccttcttgacgatgacatggttgctcatgtgagtgattttggcttagccagact |
39883941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 39890976 - 39890895
Alignment:
| Q |
330 |
ttcattgtgatctaaagccaagcaatgtccttattgatgaagacaatgttgctcatgtgagtgattttggcatagcaagact |
411 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||| || |||| |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
39890976 |
ttcattgtgatttaaaaccaagcaatgtccttcttgaagatgacatggttgctcatgtgagtgattttggcttagccagact |
39890895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 39898994 - 39898834
Alignment:
| Q |
38 |
aagaatggagctcccaagagttttattaccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattg |
137 |
Q |
| |
|
||||| ||||||| || ||||| ||| ||||||||||||| ||| |||||| || ||| ||||||| || ||| || | || ||||| |||||| | | |
|
|
| T |
39898994 |
aagaaaggagctcataaaagtttcattgccgaatgtaatgctttcagaaatatcaggcatagaaatctagtcaaggttatcacatgttgctctagtgtgg |
39898895 |
T |
|
| Q |
138 |
attacaaaggtcaggaattcaaagctctagtttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
|| | | |||| | || || ||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
39898894 |
atcatagaggtaatgactttaaagcaatagtttttgaatacatgacaaatggaagcttaga |
39898834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 39876154 - 39876022
Alignment:
| Q |
66 |
ccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctct |
165 |
Q |
| |
|
||||||||||||| | | |||||| || ||| ||||||| || |||||| | || ||||| |||||| | ||| |||||||| | || || || || | |
|
|
| T |
39876154 |
ccgaatgtaatgcttttagaaatatcaggcatagaaatctagtcaagattatcacatgttgctctagtgtggatcacaaaggtgacgactttaaggcaat |
39876055 |
T |
|
| Q |
166 |
agtttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
||||| |||||||||||||||||| |||||||| |
|
|
| T |
39876054 |
agtttatgaatacatgaaaaatgggagcttaga |
39876022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 39884277 - 39884145
Alignment:
| Q |
66 |
ccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctct |
165 |
Q |
| |
|
||||||||||||| | | |||||| || ||| ||||||| || |||||| | || ||||| |||||| | ||| |||||||| | || || || || | |
|
|
| T |
39884277 |
ccgaatgtaatgcttttagaaatatcaggcatagaaatctagtcaagattatcacatgttgctctagtgtggatcacaaaggtgacgactttaaggcaat |
39884178 |
T |
|
| Q |
166 |
agtttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
||||| ||||||||||| |||||| |||||||| |
|
|
| T |
39884177 |
agtttatgaatacatgacaaatgggagcttaga |
39884145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 198
Target Start/End: Complemental strand, 39891231 - 39891099
Alignment:
| Q |
66 |
ccgaatgtaatgcactcaaaaatattagacatcgaaatctggttaagattttaacttgttgttctagtattgattacaaaggtcaggaattcaaagctct |
165 |
Q |
| |
|
||||||||||||| | | |||||| || ||| ||||||| || |||||| | || ||||| |||||| | ||| |||||||| | || || || || | |
|
|
| T |
39891231 |
ccgaatgtaatgcttttagaaatatcaggcatagaaatctagtcaagattatcacatgttgctctagtgtggatcacaaaggtgacgactttaaggcaat |
39891132 |
T |
|
| Q |
166 |
agtttttgaatacatgaaaaatggaagcttaga |
198 |
Q |
| |
|
||||| ||||||||||| |||||| |||||||| |
|
|
| T |
39891131 |
agtttatgaatacatgacaaatgggagcttaga |
39891099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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