View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10317_low_23 (Length: 368)

Name: NF10317_low_23
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10317_low_23
NF10317_low_23
[»] chr5 (8 HSPs)
chr5 (14-302)||(25095952-25096240)
chr5 (14-302)||(25153922-25154210)
chr5 (30-243)||(25098745-25098955)
chr5 (30-243)||(25157835-25158045)
chr5 (64-243)||(31250794-31250970)
chr5 (319-350)||(25096237-25096268)
chr5 (319-350)||(25154207-25154238)
chr5 (96-125)||(32200143-32200172)
[»] chr1 (2 HSPs)
chr1 (53-243)||(26857730-26857917)
chr1 (62-125)||(3330527-3330590)
[»] chr8 (1 HSPs)
chr8 (57-243)||(18001937-18002120)
[»] chr6 (1 HSPs)
chr6 (65-243)||(10383237-10383411)
[»] chr4 (4 HSPs)
chr4 (57-243)||(7635687-7635870)
chr4 (57-125)||(50371648-50371716)
chr4 (67-243)||(5883078-5883252)
chr4 (57-125)||(19719208-19719276)
[»] chr3 (5 HSPs)
chr3 (58-243)||(30375877-30376059)
chr3 (76-125)||(30406136-30406185)
chr3 (45-125)||(44121369-44121450)
chr3 (195-243)||(25131802-25131850)
chr3 (81-122)||(4555754-4555795)
[»] chr7 (3 HSPs)
chr7 (59-125)||(33879817-33879883)
chr7 (57-125)||(8914678-8914746)
chr7 (72-120)||(9083628-9083676)
[»] scaffold0008 (2 HSPs)
scaffold0008 (75-116)||(42171-42212)
scaffold0008 (195-243)||(42047-42095)


Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 25095952 - 25096240
Alignment:
Q  14 caaaggatatagcaattatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaac 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25095952 caaaggatatagcaattatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaac 25096051  T
Q  114 ttataatgaaaattaattacagattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcgga 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25096052 ttataatgaaaattaattacggattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcgga 25096151  T
Q  214 aaagtctatcattcctttccttccaaataaggaccattgtaccaactcagacttgactccatgataaaggtaactgtcctcaaaacttt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25096152 aaagtctatcattcctttccttccaaataaggaccattgtaccaactcagacttgactccatgataaaggtaactgtcctcaaaacttt 25096240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 25153922 - 25154210
Alignment:
Q  14 caaaggatatagcaattatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaac 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25153922 caaaggatatagcaattatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaac 25154021  T
Q  114 ttataatgaaaattaattacagattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcgga 213  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25154022 ttataatgaaaattaattacggattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcgga 25154121  T
Q  214 aaagtctatcattcctttccttccaaataaggaccattgtaccaactcagacttgactccatgataaaggtaactgtcctcaaaacttt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25154122 aaagtctatcattcctttccttccaaataaggaccattgtaccaactcagacttgactccatgataaaggtaactgtcctcaaaacttt 25154210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 25098745 - 25098955
Alignment:
Q  30 tatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaa 129  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||   |    
T  25098745 tatttacattagtagttcaacagaaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcataaaacttataataaaaa---a 25098841  T
Q  130 ttacagattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcct 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||| |||||||||||||||||||    
T  25098842 ttacagattttgctttataacacggaaaagtaagtagcctgatgtactccaaaagctgtgaagatgagttttctttggtttggaaaagtctatcattcct 25098941  T
Q  230 ttccttccaaataa 243  Q
    ||||||| ||||||    
T  25098942 ttccttcaaaataa 25098955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 25157835 - 25158045
Alignment:
Q  30 tatttacatcagtagttcaacataaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaa 129  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||   |    
T  25157835 tatttacattagtagttcaacagaaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcataaaacttataataaaaa---a 25157931  T
Q  130 ttacagattttgctttataacacggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcct 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||||||| |||||||||||||||||||    
T  25157932 ttacagattttgctttataacacggaaaagtaagtagcctgatgtactccaaaagctgtgaagatgagttttctttggtttggaaaagtctatcattcct 25158031  T
Q  230 ttccttccaaataa 243  Q
    ||||||| ||||||    
T  25158032 ttccttcaaaataa 25158045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 31250970 - 31250794
Alignment:
Q  64 attagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaaaagtaag 163  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||| ||||| |||   || |   |||| ||||||||||||  |||| ||||| |||    
T  31250970 attagcccatacccaaacataagaaagggttatggcaccaatcatgatacttaaaataggaagt---tacaaattttgctttatgccacgaaaaagaaag 31250874  T
Q  164 tagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
     ||||| |||| |||| |||||||   |   |||||||||||||||||||||||||| || |||||||||||||| ||||    
T  31250873 aagcctaatgttctccaaaagctgaacaaaggagttttctttggttcggaaaagtctttcgttcctttccttccatataa 31250794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 350
Target Start/End: Original strand, 25096237 - 25096268
Alignment:
Q  319 ctttgcagtgctgcaacgtttgaataaggacc 350  Q
    ||||||||||||||||||||||||||||||||    
T  25096237 ctttgcagtgctgcaacgtttgaataaggacc 25096268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 350
Target Start/End: Original strand, 25154207 - 25154238
Alignment:
Q  319 ctttgcagtgctgcaacgtttgaataaggacc 350  Q
    ||||||||||||||||||||||||||||||||    
T  25154207 ctttgcagtgctgcaacgtttgaataaggacc 25154238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 125
Target Start/End: Complemental strand, 32200172 - 32200143
Alignment:
Q  96 tggcaccaatcatgaaacttataatgaaaa 125  Q
    ||||||||||||||||||||||||||||||    
T  32200172 tggcaccaatcatgaaacttataatgaaaa 32200143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 53 - 243
Target Start/End: Original strand, 26857730 - 26857917
Alignment:
Q  53 aaataacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacac 152  Q
    |||||||||||||||||| |||||||||| ||| || ||||||| ||||||||||| ||||||||||||||||   |||||| ||||||||||||  |||    
T  26857730 aaataacaatgattagcccatacccaaacttaaaaacgggttctagcaccaatcataaaacttataatgaaaa---attacaaattttgctttatgccac 26857826  T
Q  153 ggaaaagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    ||| ||| |||||| |||||||||||| |||| |||| ||||||||||||||||||||| |||||| |||| |||||||||||||||||||    
T  26857827 ggataagaaagtagactgatgtactccaaaagttgcgaaggtgagttttctttggttcgaaaaagtttatcgttcctttccttccaaataa 26857917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 3330527 - 3330590
Alignment:
Q  62 tgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    ||||||||||||||||||||| || || | ||| ||||||||||||||||||||||||| ||||    
T  3330527 tgattagcctatacccaaacacaaaaacgagttttggcaccaatcatgaaacttataattaaaa 3330590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 18002120 - 18001937
Alignment:
Q  57 aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaa 156  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||    || ||||||||||||  || | ||    
T  18002120 aacaatgattagcctatacccaaatataagaacaggttctggcaccaatcatgaaacttataataaaaatta---gcaaattttgctttatgccaagaaa 18002024  T
Q  157 aagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    ||| ||| ||||||| || |||| ||| |||  ||  |||| |||||||||||| |||||||||||| ||| |||||||||||||||    
T  18002023 aagaaaggagcctgaggttctccaaaatctgacgacatgagctttctttggttcagaaaagtctatcgttcatttccttccaaataa 18001937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 10383411 - 10383237
Alignment:
Q  65 ttagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaaaagtaagt 164  Q
    ||||||||| ||||||||| ||||  |||| ||||||||||||||||||||||||||   || ||||||| |||| |||||||| |||| | ||| |||     
T  10383411 ttagcctattcccaaacatgagaacaggttttggcaccaatcatgaaacttataatg---ataaattacaaatttagctttataccacgaataagaaaga 10383315  T
Q  165 agcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    ||| |||||| ||||  ||||   | ||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  10383314 agcatgatgttctccagaagc-aagaaggtgtgttttctttggctcggaaaagtctagcattcctttcctttcaaataa 10383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 7635870 - 7635687
Alignment:
Q  57 aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaa 156  Q
    |||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||||||||| |||| ||    || ||||||||||||  ||   ||    
T  7635870 aacaatgattagcctatacccaaacacaagaacgagttctgacaccaatcatgaaacttataattaaaacta---gcacattttgctttatgccaataaa 7635774  T
Q  157 aagtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    |||  |||||||| |||| |||| ||||||| |||  |||| | | ||| |||| ||| ||||| ||||||||||||||||||||||    
T  7635773 aagagagtagcctaatgttctccaaaagctgaggaaatgagctctgttttgttctgaagagtctgtcattcctttccttccaaataa 7635687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 50371648 - 50371716
Alignment:
Q  57 aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    |||||||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||| ||||    
T  50371648 aacaatgattagcctatacccaaacacaagaacggattatggcaccaatcatgaaacttataattaaaa 50371716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 5883078 - 5883252
Alignment:
Q  67 agcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaaaagtaagtag 166  Q
    |||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||| ||    || ||||||||||||  ||   |||||  |||||    
T  5883078 agcctatacccaaacacaagaacgggttctggcaccaatcatgtaacttataattaaaacta---gcaaattttgctttatgccaataaaaagagagtag 5883174  T
Q  167 cctgatgtactcctaaagctgcggaggtgagtttt-ctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    ||| |||| |||| ||||||| |||   |||||||  |||| ||  ||||| ||||||| || |||||||||||||||    
T  5883175 cctaatgttctccaaaagctggggaaaggagttttgttttgtttttgaaaattctatcaatcatttccttccaaataa 5883252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 19719276 - 19719208
Alignment:
Q  57 aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    |||||||||||| ||||||||||||| |||||  ||||| |||||||||||| ||||||||||| ||||    
T  19719276 aacaatgattagtctatacccaaacacaagaacaggttcgggcaccaatcataaaacttataattaaaa 19719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 30375877 - 30376059
Alignment:
Q  58 acaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaattaattacagattttgctttataacacggaaa 157  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||||||||||  ||||||||||| |||| ||    || ||||||||||||  || | |||    
T  30375877 acaatgattagcctatatccaaacacaagaacgggttctggcaccaatcaaaaaacttataattaaaacta---gcaaattttgctttatgccatgaaaa 30375973  T
Q  158 agtaagtagcctgatgtactcctaaagctgcggaggtgagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    ||  |||||||| |||| |||| |||| || | |   ||| ||| ||||||| | |||| |||||||||| |||||||||||||||    
T  30375974 agagagtagcctaatgttctccaaaagttgagaaaaggagctttgtttggtttgaaaaattctatcattcatttccttccaaataa 30376059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 30406136 - 30406185
Alignment:
Q  76 ccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||||    
T  30406136 ccaaacatgaaaaagggttctggcaccaatcatgaaacttataatgaaaa 30406185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 44121369 - 44121450
Alignment:
Q  45 ttcaacataaat-aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    ||||||| |||| |||||||||||| ||||||| |||||||||||  |||||| |||| |||||||||||||| ||| ||||    
T  44121369 ttcaacaaaaatgaacaatgattagactatacctaaacataagaacaggttctagcactaatcatgaaacttaaaattaaaa 44121450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 25131802 - 25131850
Alignment:
Q  195 gagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||    
T  25131802 gagttttctttggttcagaaaagtctgtcgttcctttccttccaaataa 25131850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 4555795 - 4555754
Alignment:
Q  81 cataagaaggggttctggcaccaatcatgaaacttataatga 122  Q
    |||||||| ||||| |||||||||||||||||| ||||||||    
T  4555795 cataagaaagggttatggcaccaatcatgaaacatataatga 4555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 33879817 - 33879883
Alignment:
Q  59 caatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    |||||||||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||| ||||    
T  33879817 caatgattagcctatacctaaacacaagaacggattctgccaccaatcatgaaacttataattaaaa 33879883  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 8914678 - 8914746
Alignment:
Q  57 aacaatgattagcctatacccaaacataagaaggggttctggcaccaatcatgaaacttataatgaaaa 125  Q
    ||||||||||| |||||||||||||| ||||| | |||||| |||||||||| ||||||||||| ||||    
T  8914678 aacaatgattaacctatacccaaacacaagaacgagttctgacaccaatcataaaacttataattaaaa 8914746  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 9083628 - 9083676
Alignment:
Q  72 atacccaaacataagaaggggttctggcaccaatcatgaaacttataat 120  Q
    |||||||||||  | |||||||| ||||||||||||||||| |||||||    
T  9083628 atacccaaacaacaaaaggggttatggcaccaatcatgaaaattataat 9083676  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 42212 - 42171
Alignment:
Q  75 cccaaacataagaaggggttctggcaccaatcatgaaactta 116  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  42212 cccaaacataagaaagggttctgacaccaatcatgaaactta 42171  T

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Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 42095 - 42047
Alignment:
Q  195 gagttttctttggttcggaaaagtctatcattcctttccttccaaataa 243  Q
    |||||||||||| |||||||||||||||  ||| |||| ||||||||||    
T  42095 gagttttctttgcttcggaaaagtctattgttcttttctttccaaataa 42047  T

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