View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_low_42 (Length: 254)
Name: NF10317_low_42
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 25362800 - 25362650
Alignment:
| Q |
13 |
tggtattgtcttgagtgtgaaaaatggtgtggaagtcaacaaaaaatgttcacactaggatgatttgttcctgttctcctccttttcataaatcaaacta |
112 |
Q |
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| T |
25362800 |
tggtattgtcttgagtgtgaaaaatggtgtggaagtcaacaaaatatgtttacactaggatgatttgttcatgttctcctccttttcataaatcaaacta |
25362701 |
T |
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| Q |
113 |
aagtttatatcatgaaatttatatattaaaagtcactataatgtacaattt |
163 |
Q |
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| T |
25362700 |
aagtttatatcatgaaatttatatattaaaagtaactataatgtacaattt |
25362650 |
T |
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