View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_low_45 (Length: 250)
Name: NF10317_low_45
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_low_45 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 40006447 - 40006210
Alignment:
| Q |
13 |
agaacacctcttagctcctcatcaataacaccaacaggaaaagacatgccgctcgatagagcaatgtccatccctcttattggtatttccaaatcttgca |
112 |
Q |
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| T |
40006447 |
agaacacctcttagctcctcatcaataacaccaacaggaaaagacatgccgctcgatagagcaatgtccatccctcttattggtatttccaaatcttgca |
40006348 |
T |
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| Q |
113 |
gtttctcttccgggtcaatgcaacaagagttggaaattagtgtttgaggtctctcccaatgcatgccatcctgtttgtttnnnnnnnncataatttatta |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
40006347 |
gtttctcttccgggtcaatgcaacaagagttggaaattagtgtctgaggtctctcccaatgcatgccatcctgtttgtttaaaaaaaacataatttatta |
40006248 |
T |
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| Q |
213 |
gtttatttgcaactgctaggaaatttaatactgaagct |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
40006247 |
gtttatttgcaactgctaggaaatttaatactgaagct |
40006210 |
T |
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