View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10317_low_55 (Length: 240)
Name: NF10317_low_55
Description: NF10317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10317_low_55 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 40005841 - 40006063
Alignment:
| Q |
18 |
caatgttagtgtaaagtttaacatatgcattcaataacgtgttcttacgtcgtttaatttgttcaaacacatggattgtcataattattaattgatttga |
117 |
Q |
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| T |
40005841 |
caatgttagtgtaaagtttaacatatgcattcaataacgtgttcttacgtcgtttaatttgttcaaacacatggattgtcataattattaattgatttga |
40005940 |
T |
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| Q |
118 |
aaactaaagccaagatattaaaaacacactttacacattgttttgctttcaggcaaggaagttcaaccaactatacattgagaatacatctgagagatta |
217 |
Q |
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| T |
40005941 |
aaactaaagcgaagatattaaaaacacactttgcacattgttttgctttcaggcaaggaagttcaaccaactatacattgagaatacatctgagagatta |
40006040 |
T |
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| Q |
218 |
aattgcaatatagaggccatctc |
240 |
Q |
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| T |
40006041 |
aattgcaatatagaggccatctc |
40006063 |
T |
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