View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10319_low_22 (Length: 331)
Name: NF10319_low_22
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10319_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 313
Target Start/End: Original strand, 41123646 - 41123944
Alignment:
| Q |
11 |
cacagatggtgcaacctgtggttcttcatatatatatgcagagttctttgctacaatgtatgatattgatataacctatttgtataattggtggagtctc |
110 |
Q |
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| T |
41123646 |
cacagatggtgcaacctgtggttctccatat----atgcagagttctttgctacaatgtatgatattgatataacctatttgtataattggtggagtctc |
41123741 |
T |
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| Q |
111 |
tatagctcgaatgtgattctaagtaattggtggtttggagtcttactattagatggagaaactgtttgcagtcatatgagtttttaagtttccaacatct |
210 |
Q |
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| T |
41123742 |
tatagctcgaatgtgattctaagtaattgatggtttggagtcttactattagatggagaaactgtttgcagtcatatgagtttttaagtttccaacatct |
41123841 |
T |
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| Q |
211 |
atagcgatagggaagacaattattgtacttcttctcatggctctcattggtgctcaatcactcctaatttgttgttgaaaacatctttaaaaatagggtt |
310 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41123842 |
atagccatagggaagacaattattgtacttcttctcatggctctcattggtgctcaatcactcctaatttgttgttgaaaacatctttaaaaatagggtt |
41123941 |
T |
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