View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10319_low_29 (Length: 304)

Name: NF10319_low_29
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10319_low_29
NF10319_low_29
[»] chr3 (47 HSPs)
chr3 (77-257)||(41933241-41933421)
chr3 (77-257)||(7910131-7910311)
chr3 (73-257)||(1694938-1695122)
chr3 (113-257)||(26898218-26898362)
chr3 (109-257)||(9301033-9301181)
chr3 (113-257)||(55423716-55423860)
chr3 (106-257)||(26823011-26823162)
chr3 (76-257)||(31412107-31412287)
chr3 (76-249)||(33911618-33911791)
chr3 (75-257)||(54313318-54313500)
chr3 (113-257)||(1842538-1842682)
chr3 (77-257)||(43087933-43088113)
chr3 (77-256)||(39095227-39095406)
chr3 (75-257)||(3994990-3995172)
chr3 (113-257)||(10804509-10804653)
chr3 (113-257)||(50155517-50155661)
chr3 (75-257)||(3974705-3974887)
chr3 (76-248)||(17525302-17525473)
chr3 (109-241)||(14741005-14741137)
chr3 (77-257)||(32774414-32774594)
chr3 (113-257)||(41879387-41879531)
chr3 (76-243)||(29522785-29522952)
chr3 (114-243)||(33215392-33215521)
chr3 (77-257)||(49318267-49318447)
chr3 (109-257)||(51744103-51744252)
chr3 (114-243)||(51885297-51885426)
chr3 (113-243)||(7399701-7399832)
chr3 (114-257)||(42480988-42481131)
chr3 (77-257)||(1460258-1460438)
chr3 (86-223)||(10267812-10267949)
chr3 (117-257)||(24570265-24570405)
chr3 (77-243)||(12768564-12768730)
chr3 (117-223)||(15489084-15489190)
chr3 (117-257)||(1557332-1557471)
chr3 (101-257)||(35603810-35603966)
chr3 (77-257)||(36638061-36638241)
chr3 (117-256)||(44845231-44845370)
chr3 (76-231)||(28970527-28970683)
chr3 (77-219)||(41209396-41209537)
chr3 (77-241)||(39620438-39620602)
chr3 (113-257)||(44310251-44310395)
chr3 (189-256)||(28816103-28816170)
chr3 (113-243)||(53468080-53468209)
chr3 (79-190)||(49506100-49506211)
chr3 (200-257)||(15646479-15646536)
chr3 (113-155)||(27182399-27182441)
chr3 (113-155)||(30105825-30105867)
[»] chr1 (41 HSPs)
chr1 (74-257)||(5114866-5115049)
chr1 (76-257)||(40601710-40601891)
chr1 (76-257)||(44372860-44373041)
chr1 (76-257)||(48812516-48812697)
chr1 (113-257)||(30723300-30723444)
chr1 (77-257)||(19406610-19406790)
chr1 (77-257)||(39995436-39995616)
chr1 (113-257)||(41310505-41310649)
chr1 (76-243)||(28199180-28199347)
chr1 (114-257)||(1858752-1858895)
chr1 (77-257)||(699871-700051)
chr1 (114-257)||(48913581-48913724)
chr1 (76-257)||(44922154-44922335)
chr1 (113-257)||(35985469-35985613)
chr1 (77-257)||(50511957-50512137)
chr1 (72-257)||(33814903-33815087)
chr1 (72-257)||(33874373-33874557)
chr1 (79-232)||(42102156-42102308)
chr1 (114-243)||(47034514-47034643)
chr1 (77-257)||(40412495-40412675)
chr1 (114-240)||(38235638-38235764)
chr1 (77-197)||(52929451-52929571)
chr1 (109-243)||(45826663-45826797)
chr1 (77-257)||(23974159-23974338)
chr1 (121-257)||(25423271-25423407)
chr1 (76-243)||(48940765-48940937)
chr1 (114-256)||(48605821-48605962)
chr1 (126-243)||(20722202-20722319)
chr1 (130-255)||(21088508-21088633)
chr1 (76-257)||(45794063-45794240)
chr1 (114-199)||(39003048-39003133)
chr1 (113-257)||(343113-343242)
chr1 (151-257)||(21719945-21720051)
chr1 (113-187)||(46868747-46868821)
chr1 (145-242)||(25155740-25155837)
chr1 (145-223)||(27414061-27414139)
chr1 (77-257)||(6715105-6715284)
chr1 (77-257)||(12255175-12255347)
chr1 (149-243)||(50863858-50863952)
chr1 (210-257)||(46868829-46868876)
chr1 (228-257)||(52929413-52929442)
[»] chr8 (42 HSPs)
chr8 (76-257)||(6266235-6266416)
chr8 (76-257)||(5927042-5927223)
chr8 (77-257)||(24101721-24101901)
chr8 (114-257)||(11202155-11202298)
chr8 (76-243)||(41395775-41395942)
chr8 (76-257)||(38231701-38231881)
chr8 (113-257)||(26098274-26098418)
chr8 (113-257)||(41827527-41827671)
chr8 (76-256)||(42935752-42935931)
chr8 (77-243)||(31894922-31895087)
chr8 (104-257)||(40027736-40027889)
chr8 (113-257)||(37819212-37819356)
chr8 (106-257)||(28994756-28994905)
chr8 (116-257)||(14615550-14615691)
chr8 (117-257)||(7161575-7161715)
chr8 (113-257)||(24476356-24476500)
chr8 (103-257)||(15041326-15041480)
chr8 (113-257)||(41644150-41644294)
chr8 (77-256)||(20823477-20823656)
chr8 (117-256)||(27639993-27640132)
chr8 (103-257)||(21412435-21412589)
chr8 (103-257)||(21806927-21807081)
chr8 (117-257)||(7433414-7433554)
chr8 (114-243)||(37255569-37255698)
chr8 (113-241)||(44679145-44679273)
chr8 (77-256)||(29940068-29940247)
chr8 (77-257)||(356409-356589)
chr8 (77-249)||(40027534-40027706)
chr8 (77-256)||(7764302-7764481)
chr8 (77-216)||(38894680-38894819)
chr8 (77-223)||(5913259-5913405)
chr8 (103-257)||(32018318-32018472)
chr8 (136-239)||(43067084-43067187)
chr8 (113-257)||(5924532-5924661)
chr8 (114-223)||(22487330-22487439)
chr8 (77-257)||(23192839-23193019)
chr8 (157-243)||(957506-957592)
chr8 (76-174)||(32925404-32925502)
chr8 (204-257)||(18654488-18654541)
chr8 (120-215)||(34347019-34347114)
chr8 (188-257)||(30874177-30874246)
chr8 (113-161)||(20983839-20983887)
[»] chr4 (54 HSPs)
chr4 (77-257)||(56264379-56264559)
chr4 (76-256)||(401334-401514)
chr4 (77-257)||(6643269-6643449)
chr4 (77-257)||(19823619-19823799)
chr4 (77-257)||(53724827-53725007)
chr4 (77-256)||(53925306-53925485)
chr4 (113-257)||(35392748-35392892)
chr4 (113-257)||(50097395-50097539)
chr4 (114-257)||(15194480-15194623)
chr4 (76-243)||(40731191-40731358)
chr4 (104-257)||(51435550-51435703)
chr4 (113-257)||(26706883-26707027)
chr4 (113-257)||(54093962-54094106)
chr4 (76-257)||(19521739-19521920)
chr4 (113-257)||(24678272-24678416)
chr4 (77-257)||(30000213-30000392)
chr4 (117-257)||(39240400-39240540)
chr4 (113-257)||(39809594-39809738)
chr4 (113-243)||(35666583-35666713)
chr4 (80-257)||(56114169-56114346)
chr4 (83-243)||(1138978-1139138)
chr4 (113-257)||(16623462-16623606)
chr4 (113-257)||(34435894-34436037)
chr4 (76-257)||(48152681-48152847)
chr4 (113-243)||(18861623-18861751)
chr4 (104-257)||(44871486-44871639)
chr4 (109-257)||(41140601-41140749)
chr4 (113-257)||(13563374-13563506)
chr4 (75-257)||(32555640-32555822)
chr4 (113-223)||(36694112-36694222)
chr4 (113-254)||(19474665-19474806)
chr4 (113-256)||(41883116-41883259)
chr4 (114-257)||(56519969-56520111)
chr4 (77-257)||(52278776-52278955)
chr4 (76-243)||(33493102-33493269)
chr4 (147-257)||(49480751-49480861)
chr4 (77-257)||(41831169-41831349)
chr4 (115-254)||(45849299-45849438)
chr4 (76-257)||(16346855-16347021)
chr4 (104-191)||(51031641-51031728)
chr4 (113-257)||(4709252-4709381)
chr4 (77-198)||(6366323-6366444)
chr4 (104-180)||(42248053-42248129)
chr4 (150-241)||(24534651-24534741)
chr4 (75-188)||(40226904-40227017)
chr4 (132-243)||(42587327-42587438)
chr4 (186-257)||(48500306-48500377)
chr4 (77-243)||(31616494-31616660)
chr4 (140-243)||(35013830-35013933)
chr4 (77-155)||(48500383-48500461)
chr4 (76-161)||(20671894-20671979)
chr4 (207-257)||(8907050-8907100)
chr4 (213-245)||(31290614-31290646)
chr4 (120-243)||(32767598-32767722)
[»] chr2 (38 HSPs)
chr2 (75-257)||(31742840-31743022)
chr2 (77-257)||(27495846-27496026)
chr2 (113-257)||(1346246-1346390)
chr2 (77-257)||(1002473-1002653)
chr2 (113-257)||(10261308-10261452)
chr2 (77-257)||(30555605-30555785)
chr2 (77-257)||(31618062-31618242)
chr2 (76-255)||(28222875-28223054)
chr2 (75-257)||(12847831-12848013)
chr2 (115-257)||(35439504-35439646)
chr2 (77-243)||(36240734-36240900)
chr2 (77-243)||(29810679-29810845)
chr2 (77-257)||(10822246-10822426)
chr2 (77-257)||(26984434-26984614)
chr2 (76-243)||(27551936-27552103)
chr2 (76-257)||(23334006-23334189)
chr2 (113-257)||(45517162-45517306)
chr2 (113-243)||(10440139-10440269)
chr2 (128-257)||(38962213-38962342)
chr2 (81-257)||(41644258-41644434)
chr2 (77-257)||(42799478-42799657)
chr2 (113-243)||(13247727-13247857)
chr2 (113-243)||(30016206-30016336)
chr2 (113-257)||(30801174-30801318)
chr2 (127-257)||(2650055-2650186)
chr2 (106-257)||(34313729-34313880)
chr2 (103-243)||(18258032-18258172)
chr2 (74-257)||(2557616-2557799)
chr2 (77-257)||(10709709-10709889)
chr2 (77-257)||(19944766-19944946)
chr2 (114-257)||(25868901-25869044)
chr2 (109-257)||(37209506-37209654)
chr2 (116-243)||(13311525-13311652)
chr2 (140-257)||(27258811-27258928)
chr2 (113-257)||(20932462-20932597)
chr2 (104-223)||(12017480-12017599)
chr2 (79-213)||(9439274-9439408)
chr2 (77-223)||(37208889-37209036)
[»] chr5 (48 HSPs)
chr5 (76-257)||(7949694-7949875)
chr5 (77-257)||(26264358-26264538)
chr5 (77-257)||(26507198-26507378)
chr5 (76-257)||(24566188-24566369)
chr5 (76-257)||(24607224-24607405)
chr5 (113-257)||(28759338-28759482)
chr5 (114-256)||(20122706-20122848)
chr5 (77-257)||(39479307-39479487)
chr5 (76-255)||(5361142-5361320)
chr5 (113-257)||(1840513-1840657)
chr5 (77-257)||(16748916-16749096)
chr5 (114-257)||(27345231-27345374)
chr5 (113-257)||(16653904-16654048)
chr5 (77-257)||(17320331-17320511)
chr5 (77-257)||(18922122-18922302)
chr5 (117-257)||(43320498-43320638)
chr5 (116-257)||(7073962-7074103)
chr5 (113-243)||(2466288-2466418)
chr5 (77-257)||(21162640-21162820)
chr5 (77-257)||(7344656-7344836)
chr5 (77-257)||(21151697-21151877)
chr5 (77-257)||(21158832-21159012)
chr5 (101-239)||(2800615-2800752)
chr5 (101-239)||(2806784-2806921)
chr5 (75-257)||(4725139-4725320)
chr5 (77-243)||(8320477-8320643)
chr5 (103-257)||(17016470-17016624)
chr5 (113-257)||(1463066-1463208)
chr5 (114-243)||(36682732-36682861)
chr5 (113-257)||(14505870-14506014)
chr5 (114-208)||(5494666-5494760)
chr5 (77-243)||(24316511-24316677)
chr5 (75-243)||(7826924-7827092)
chr5 (76-254)||(39048633-39048810)
chr5 (77-198)||(38062946-38063066)
chr5 (114-257)||(41203305-41203444)
chr5 (184-256)||(39088998-39089070)
chr5 (185-257)||(8321755-8321827)
chr5 (182-257)||(6286172-6286247)
chr5 (168-257)||(19646925-19647014)
chr5 (132-256)||(31878069-31878193)
chr5 (77-220)||(39087644-39087786)
chr5 (115-197)||(9528662-9528744)
chr5 (77-257)||(39754368-39754541)
chr5 (77-223)||(7726342-7726488)
chr5 (113-155)||(39088952-39088994)
chr5 (220-257)||(5494758-5494795)
chr5 (113-162)||(6286128-6286177)
[»] chr7 (47 HSPs)
chr7 (77-257)||(37471491-37471671)
chr7 (77-257)||(32795678-32795858)
chr7 (77-257)||(24764155-24764335)
chr7 (104-257)||(36992158-36992311)
chr7 (113-257)||(34202628-34202771)
chr7 (77-257)||(37085721-37085901)
chr7 (77-256)||(35528351-35528530)
chr7 (77-243)||(47761670-47761836)
chr7 (113-257)||(555728-555872)
chr7 (113-257)||(39560505-39560649)
chr7 (114-257)||(8613754-8613897)
chr7 (113-257)||(29507945-29508089)
chr7 (114-253)||(3699181-3699320)
chr7 (74-257)||(30071986-30072169)
chr7 (77-257)||(13598037-13598217)
chr7 (75-239)||(8781447-8781611)
chr7 (77-257)||(33889180-33889360)
chr7 (77-243)||(17195475-17195641)
chr7 (113-257)||(5215691-5215835)
chr7 (76-256)||(33626898-33627078)
chr7 (77-243)||(47099118-47099284)
chr7 (117-257)||(32527976-32528115)
chr7 (113-257)||(9696997-9697129)
chr7 (76-207)||(40685628-40685759)
chr7 (106-223)||(33590279-33590396)
chr7 (113-257)||(42976701-42976845)
chr7 (121-257)||(3319007-3319143)
chr7 (113-257)||(15457160-15457303)
chr7 (113-257)||(31325370-31325514)
chr7 (77-188)||(48137246-48137357)
chr7 (132-257)||(22791769-22791895)
chr7 (115-240)||(2370744-2370869)
chr7 (3-76)||(21955506-21955579)
chr7 (117-257)||(34349680-34349820)
chr7 (113-208)||(34182088-34182182)
chr7 (117-254)||(36863263-36863400)
chr7 (132-257)||(8632778-8632903)
chr7 (116-257)||(46817041-46817180)
chr7 (114-255)||(49112335-49112476)
chr7 (113-254)||(23108543-23108684)
chr7 (204-257)||(40683489-40683542)
chr7 (115-223)||(18834231-18834339)
chr7 (113-165)||(48949603-48949655)
chr7 (190-243)||(48949549-48949602)
chr7 (122-257)||(10013252-10013386)
chr7 (210-257)||(40921631-40921678)
chr7 (171-223)||(36643394-36643446)
[»] chr6 (23 HSPs)
chr6 (77-257)||(2702963-2703143)
chr6 (77-257)||(17547462-17547642)
chr6 (79-257)||(29641012-29641190)
chr6 (104-257)||(4170901-4171054)
chr6 (79-251)||(31511197-31511369)
chr6 (77-257)||(26555184-26555368)
chr6 (113-257)||(2067144-2067288)
chr6 (78-257)||(15183712-15183892)
chr6 (113-257)||(22988137-22988281)
chr6 (113-257)||(23800115-23800259)
chr6 (113-257)||(9035066-9035210)
chr6 (77-257)||(15067987-15068167)
chr6 (77-257)||(12577291-12577470)
chr6 (116-257)||(32897086-32897227)
chr6 (77-213)||(34178403-34178539)
chr6 (132-243)||(29034472-29034583)
chr6 (76-257)||(13835884-13836065)
chr6 (77-243)||(21036030-21036196)
chr6 (132-257)||(26483659-26483784)
chr6 (77-188)||(13087706-13087817)
chr6 (103-257)||(28985265-28985422)
chr6 (210-257)||(13087824-13087871)
chr6 (170-229)||(2289979-2290038)
[»] scaffold0036 (1 HSPs)
scaffold0036 (76-257)||(27586-27767)
[»] scaffold0124 (1 HSPs)
scaffold0124 (76-257)||(40024-40205)
[»] scaffold0007 (2 HSPs)
scaffold0007 (77-257)||(56195-56374)
scaffold0007 (113-223)||(231673-231783)
[»] scaffold0664 (1 HSPs)
scaffold0664 (119-257)||(7751-7889)
[»] scaffold1318 (1 HSPs)
scaffold1318 (117-257)||(950-1090)
[»] scaffold0360 (1 HSPs)
scaffold0360 (113-257)||(12770-12914)
[»] scaffold0831 (1 HSPs)
scaffold0831 (104-257)||(39-192)
[»] scaffold0661 (1 HSPs)
scaffold0661 (77-257)||(1534-1714)
[»] scaffold0171 (1 HSPs)
scaffold0171 (115-256)||(2317-2458)
[»] scaffold0173 (1 HSPs)
scaffold0173 (77-198)||(21970-22091)
[»] scaffold1243 (1 HSPs)
scaffold1243 (77-223)||(1976-2122)
[»] scaffold0019 (1 HSPs)
scaffold0019 (114-257)||(103079-103222)
[»] scaffold0461 (2 HSPs)
scaffold0461 (76-198)||(2379-2501)
scaffold0461 (76-198)||(9315-9437)
[»] scaffold0583 (1 HSPs)
scaffold0583 (77-188)||(2201-2312)
[»] scaffold0079 (1 HSPs)
scaffold0079 (76-257)||(45840-46006)
[»] scaffold0951 (1 HSPs)
scaffold0951 (151-257)||(1541-1645)
[»] scaffold0021 (2 HSPs)
scaffold0021 (113-202)||(125875-125964)
scaffold0021 (204-257)||(120949-121002)
[»] scaffold0041 (1 HSPs)
scaffold0041 (210-257)||(51417-51464)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 41933241 - 41933421
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  41933241 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 41933340  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41933341 ttttcagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 41933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 7910311 - 7910131
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  7910311 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 7910212  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  7910211 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 7910131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 1694938 - 1695122
Alignment:
Q  73 caggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaata 172  Q
    ||||||||||||||||||||||| ||  | ||||| | | |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  1694938 caggtagagctgtcaaaacgggccggctcgtatgggctggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaata 1695037  T
Q  173 gggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||| ||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1695038 gggctttttagcccggcccttaaaaacccggtaccctttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1695122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 26898218 - 26898362
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  26898218 cccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 26898317  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26898318 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 26898362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 9301181 - 9301033
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||| |||| ||||||||||||||||| |||||||||    
T  9301181 ccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagccggaattttaatagggctttttagcccggcccttaaaagcccggtaccc 9301082  T
Q  209 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9301081 gttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 9301033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 55423716 - 55423860
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  55423716 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 55423815  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  55423816 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 55423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 26823011 - 26823162
Alignment:
Q  106 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 205  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  26823011 ggaccggcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggta 26823110  T
Q  206 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26823111 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26823162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 31412287 - 31412107
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||| |  || |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  31412287 gtagagctgtcaaaacgggccggcccgtatagggcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 31412188  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||  ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  31412187 ctttttagcccggcccttaaaaacccggtacccattagggctagcccgaa-gggccacgggtagcccgttagcccgcataac 31412107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 249
Target Start/End: Original strand, 33911618 - 33911791
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| |||  ||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||     
T  33911618 gtagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaatagga 33911717  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcc 249  Q
     |||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||    
T  33911718 ctttttagcccggcccttaaaagtccggtacccgttagggctagtccgaatgggccgcgggtagcccgttagcc 33911791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 75 - 257
Target Start/End: Complemental strand, 54313500 - 54313318
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||| || || || || ||  |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||    
T  54313500 ggtagagctgtcaaaacgggccgggccttacgggccagcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagg 54313401  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | |||| ||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  54313400 gctttttagcccggccctaaaaagcccggtacccgttagggctagcccgaaagggccgcgggtagcccgttagcccgcataac 54313318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 1842538 - 1842682
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||||||| |||    
T  1842538 cccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgtta 1842637  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  1842638 gggctagcccgaatgggtcgcgggtagcccgttagcccgcataac 1842682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 43087933 - 43088113
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  ||    ||||| ||| | |||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||     
T  43087933 tagagctgtcaaaacgggtcgggttgtatgggccggctcgtttagcccaaataaatatagggtttgggcctaaaatattgagcccaaattttaatagggc 43088032  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||    
T  43088033 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcaggtagcccgttagtccgcataac 43088113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 39095406 - 39095227
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | ||  | ||| | ||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| |     
T  39095406 tagagctgtcaaaacggactgggtcgtataggccggcccgtttagcccgaaaaaatatagggtttgggcctaaaatattgagcccgaattttaatagagc 39095307  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| | ||||||||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  39095306 tttttaacccggcccttaaaaacccggtacccgttagggctagcccgaacggaccgcgggtagcccgttagcccgcataa 39095227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 3994990 - 3995172
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||| || || ||||| ||| ||| |||||||||| ||||||||||| || | ||| ||||||| ||||||||||||||||||    
T  3994990 ggtagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagg 3995089  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | |||| ||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3995090 gctttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 10804653 - 10804509
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| || |||||| |||    
T  10804653 cccgtttagcccgaataaatatagagtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgtta 10804554  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||    
T  10804553 gggctagcccgaatgagccacgggtagcccgttagcccgcataac 10804509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 50155661 - 50155517
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||| |||| |||||| |||||||||| ||||||||| |||    
T  50155661 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccaaattttaatagggctttttagcccgacccttaaaagcccggtacccgtta 50155562  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50155561 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50155517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 75 - 257
Target Start/End: Complemental strand, 3974887 - 3974705
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||| || || ||||| ||| ||| |||||||||| ||||||||||| || | ||| ||||||| ||||||||||||||||||    
T  3974887 ggtagagctgtcaaaacgggccgggccgtatgggccggcccatttagcccgattaaatatagggcttaggccttaaatattgagcccgaattttaatagg 3974788  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | |||| ||||||||||| ||||  ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  3974787 gctttttagcccggccctaaaaatcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 3974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 248
Target Start/End: Complemental strand, 17525473 - 17525302
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    ||||||||||||||||| || || || ||||||||| ||||||||||| |||||||||||||| ||||  |||||||||| |||||||||||||||||||    
T  17525473 gtagagctgtcaaaacgtgccggcccgtatggaccggcccgtttagcc-gaataaatatagggcttgggtctaaaatattgagcccgaattttaataggg 17525375  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagc 248  Q
     |||| |||||||| |||||||| |||||| || | |||||||||||||| ||||||||||||||||||||||    
T  17525374 ctttttagcccggctcttaaaagcccggtatccgtcagggctagcccgaatgggccgcgggtagcccgttagc 17525302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 14741137 - 14741005
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||  |||||||||| |||||||||    
T  14741137 ccgacccgtttaacccaaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagccctacccttaaaagcccggtaccc 14741038  T
Q  209 tttagggctagcccgaacgggccgcgggtagcc 241  Q
     ||||||||||||||||||||||||||||||||    
T  14741037 gttagggctagcccgaacgggccgcgggtagcc 14741005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 32774594 - 32774414
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  ||  | || || ||| |||||||||||||| ||| ||||||  |||| ||| ||||||| |||||||||||||||||||     
T  32774594 tagagctgtcaaaacgggtcgggtcttacgggccggcccgtttagcccgattaattataggacttgggccttaaatattgagcccgaattttaatagggc 32774495  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  32774494 tttttagcccggccctaaaaagcccggtacccgttagggctagcccgaaagggccgcgggtagcccgttagcccacataac 32774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 41879531 - 41879387
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| |||||||||||||||| ||||||| || ||||| |||||||||| |||| ||||||||||| ||||||| ||||||| |||    
T  41879531 cccgtttagcccgattaattatagggtttggaccttaaatattgagtccgaaatttaatagggctttttagcccggccctaaaaagtctggtacccgtta 41879432  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||    
T  41879431 gggctagcccgaaagggccgcgggtagcccgttagcccacataac 41879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 29522952 - 29522785
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| |||||||||||||| ||| |||||||||||| ||| ||||||| || ||||||||||||||||    
T  29522952 gtagagctgtcaaaacgggccgggccctatgggccggcccgtttagcccgattaattatagggtttgggccttaaatattgagtccgaattttaataggg 29522853  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| ||||||||||| ||||| ||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  29522852 ctttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacaggccgagggtagcccg 29522785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 33215392 - 33215521
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||  ||||    
T  33215392 ccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagttcggtacctgttag 33215491  T
Q  214 ggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||| |||||||||||||||||    
T  33215492 ggctagcccgaatgggccgcgggtagcccg 33215521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 49318267 - 49318447
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || ||||| ||| |||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  49318267 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggt 49318366  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | |||||||||  |||  ||| ||||| ||||||||| ||||||||||||| |||| ||||| |||||||||||||    
T  49318367 tttttaacccggccctataaaacccgctacccgttagggctaacccgaacgggccgagggttgcccgctagcccgcataac 49318447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 51744103 - 51744252
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt-ttttcagcccggcccttaaaagtccggtacc 207  Q
    |||||||||||| ||||| ||| |||||||||||| ||| |||| || | |||||||||||||||||| |||| ||||||||||| |||||  |||||||    
T  51744103 ccgacccgtttaacccgattaattatagggtttgggccttaaatgttgaacccgaattttaatagggtctttttagcccggccctaaaaagctcggtacc 51744202  T
Q  208 ctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51744203 cattagggctagcccgaacgggctgcgggtagcccgttagcccgcataac 51744252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 51885426 - 51885297
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||    
T  51885426 ccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagtccgctacccgttag 51885327  T
Q  214 ggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||||||||| ||||||||||    
T  51885326 ggctagcccgaacgggccgagggtagcccg 51885297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 7399701 - 7399832
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg-gtacccttt 211  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||  | ||| ||    
T  7399701 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgattccccgtt 7399800  T
Q  212 agggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||||| |||||||||||||||||    
T  7399801 agggctagcccgaatgggccgcgggtagcccg 7399832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 42481131 - 42480988
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| |||||| |||||||||||| |||| ||||||||||| ||||| ||| ||||| ||||    
T  42481131 ccgtttagcccgattaattatagggcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagcccgatacccgttag 42481032  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||||| ||||||||||||||||||||||||||||||||||||    
T  42481031 agctagctcgaacgggccgcgggtagcccgttagcccgcataac 42480988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 1460438 - 1460258
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | || || ||||| ||| ||||||||| | || ||||||||||| |||| ||| ||||||| ||||||||||||||||| |     
T  1460438 tagagctgtcaaaacggaccgggccgtatgggccggcccgtttagtctgattaaatatagggcttgggccttaaatattgagcccgaattttaatagagc 1460339  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| || || ||||||||||||||||||||||| |||||||||| || |||| |||||    
T  1460338 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctatcccgaataac 1460258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 223
Target Start/End: Original strand, 10267812 - 10267949
Alignment:
Q  86 caaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcc 185  Q
    ||||| |||| || || ||||| ||| |||||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||| |||| ||||    
T  10267812 caaaatgggctgggccgtatgggccggcccgtttagcccgaataaatatagggctcgggcctaaaatattgagcccgaattttaatagggctttttagcc 10267911  T
Q  186 cggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    ||||||||||||| ||| ||||| ||||||||||||||    
T  10267912 cggcccttaaaagcccgttacccgttagggctagcccg 10267949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 24570265 - 24570405
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||| ||||| |||||||||||||||| ||| ||||| | |||||||||||||||| ||||||| || |||| ||| ||||||||| ||||| |||||||    
T  24570265 tttaacccgattaaatatagggtttgggccttaaataatgagcccgaattttaataaggttttttagtccggtcctaaaaagtccgctacccgttagggc 24570364  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||| |||||||||| ||| |||||||||    
T  24570365 tagcccgaacgggccgagggtagcccgctagtccgcataac 24570405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 12768564 - 12768730
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||| |||||||||| || || || || ||| |||||||| ||||| ||| ||||||| |||| | | ||||||| |||||||||||||||||||     
T  12768564 tagagctggcaaaacgggccgggccttacgggccggcccgtttaacccgattaattatagggcttgggctttaaatattgagcccgaattttaatagggc 12768663  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| |||| |||||| ||||| |||||| || |||||||||||||||||||| |||||||||||||    
T  12768664 tttttagcctggccctaaaaagcccggtatccgttagggctagcccgaacgggtcgcgggtagcccg 12768730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 15489084 - 15489190
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||| ||||||| |||||||    
T  15489084 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagtctggtacccgttagggc 15489183  T
Q  217 tagcccg 223  Q
    |||||||    
T  15489184 tagcccg 15489190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 1557471 - 1557332
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||| ||| ||||||||||||  || ||||||||||  |||||||||||||| ||||| || |||||||| |||||| |||||||| |||||||    
T  1557471 tttagcccgattaattatagggtttgggtcttaaatattaagatcgaattttaataggattttttagtccggccctaaaaagttcggtaccccttagggc 1557372  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  1557371 tagctcgaac-ggccgcggatagcccgttagcccgcataac 1557332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 257
Target Start/End: Complemental strand, 35603966 - 35603810
Alignment:
Q  101 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 200  Q
    ||||||| |||||||||||||||||| ||| ||||||| |||| ||| ||||||| |||| |||||||||||||| |||| |||||| || | ||||| |    
T  35603966 catatggcccgacccgtttagcccgattaattatagggcttgggccttaaatattgagccggaattttaataggggtttttagcccgaccttaaaaagcc 35603867  T
Q  201 cggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||||    |||||||||||||||||||| |||||||||| |||||||||||||    
T  35603866 cgctacccgaacgggctagcccgaacgggccgagggtagcccgctagcccgcataac 35603810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 36638061 - 36638241
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||  || || ||||| ||  |||||||||||||| |||||||||||  ||| ||| ||||||| |||||||||||||||||||     
T  36638061 tagagctgtcaaaacaggtcgggccgtatgggccagcccgtttagcccgattaaatatagggcctgggccttaaatattgagcccgaattttaatagggc 36638160  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||| |||||| ||||  | | | ||| ||||||||||||||||||||||| |||||||||| ||||| |||||||    
T  36638161 tttttagcctggccctaaaaaacctgctgcccgttagggctagcccgaacgggccgagggtagcccgctagcctgcataac 36638241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 44845370 - 44845231
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||| ||| ||||||||||||   | ||||||| ||||||||||||||||||  |||| ||||||||  | | ||| ||||||||| |||||||    
T  44845370 tttagcccgattaattatagggtttgggttttaaatattgagcccgaattttaataggactttttagcccggctttaagaagcccggtacccgttagggc 44845271  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||||||||||||| || |||||||||||||| |||||||    
T  44845270 tagcccgaacgggctgcaggtagcccgttagctcgcataa 44845231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 231
Target Start/End: Original strand, 28970527 - 28970683
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggacc-gacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    |||||||||||||||||||  || |||||||| || | |||||||||||||| ||  ||||||| |||| ||| ||||||| |||||||||||||||| |    
T  28970527 gtagagctgtcaaaacgggtcgggccatatgggcccggcccgtttagcccgattatttatagggcttgggccttaaatattgagcccgaattttaataag 28970626  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    | |||| | ||||| ||| ||||| ||||||||| |||||||||| | |||||||||    
T  28970627 gctttttaccccggtcctgaaaagcccggtacccgttagggctagtctgaacgggcc 28970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 77 - 219
Target Start/End: Complemental strand, 41209537 - 41209396
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||  | || |||||  |||||||| ||||| ||| |||||| ||||| | | ||||||| |||||||||||||||||||     
T  41209537 tagagctgtcaaaacgggccgggtcgtacggaccagcccgtttaacccgattaattatagg-tttgggctttaaatattgagcccgaattttaatagggc 41209439  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctag 219  Q
    |||| |||||| |||| ||||||||||||||| ||||||||||    
T  41209438 tttttagcccgaccctaaaaagtccggtacccgttagggctag 41209396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 241
Target Start/End: Original strand, 39620438 - 39620602
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||| |||||||||||||  || || ||||| ||| |||||||||||| | ||| ||||||| |||| ||| ||||||| ||||| ||||||||| |||     
T  39620438 tagaactgtcaaaacgggacgggccgtatgggccggcccgtttagcccaattaattatagggcttgggccttaaatattgagcccaaattttaatggggc 39620537  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcc 241  Q
    |||| ||||||||||| |||||  ||||| || ||| |||||||||||||  ||| |||||||||    
T  39620538 tttttagcccggccctaaaaagctcggtatccgttaaggctagcccgaacaagccacgggtagcc 39620602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 44310251 - 44310395
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||| ||| ||| ||||||| |||  ||| ||||||| ||||||||||||||||||| |||| |||||  |||| ||||| | | || || |||    
T  44310251 cccgtttagctcgattaattatagggcttgtgccttaaatattgagcccgaattttaatagggctttttagcccaaccctaaaaagcctgctatccgtta 44310350  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||||||||| |||||| ||| |||||||||||||    
T  44310351 gggctaacccgaacgggccgagggtagtccgctagcccgcataac 44310395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 28816170 - 28816103
Alignment:
Q  189 cccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  28816170 cccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 28816103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 53468080 - 53468209
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||| ||||| ||| ||||||| |||| ||| ||||||||||| ||||||||||||||| |||| |||||| |||| |||||  ||| |||| |||    
T  53468080 cccgtttaacccgattaattatagggcttgggccttaaatattaagcacgaattttaatagggctttttagcccgaccctaaaaagcacggaacccgtta 53468179  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
     |||||||||||||||| || ||||||||||    
T  53468180 tggctagcccgaacggg-cgggggtagcccg 53468209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 49506100 - 49506211
Alignment:
Q  79 gagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttt 178  Q
    ||||||||||||||||  || |  ||||||||| |||||||||||||| ||| |||||||||||| ||| ||||||| |||| |||||||||||||| ||    
T  49506100 gagctgtcaaaacgggtcgggctgtatggaccggcccgtttagcccgattaattatagggtttgggccttaaatattgagcctgaattttaatagggctt 49506199  T
Q  179 ttcagcccggcc 190  Q
    || || ||||||    
T  49506200 tttagtccggcc 49506211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 15646536 - 15646479
Alignment:
Q  200 ccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||    
T  15646536 ccggtacccgttagggctagcccgcatgggccgcgggtatcccgttagcccgcataac 15646479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 27182441 - 27182399
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatatt 155  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  27182441 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 27182399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 30105867 - 30105825
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatatt 155  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  30105867 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 30105825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 5114866 - 5115049
Alignment:
Q  74 aggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatag 173  Q
    |||| ||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  5114866 aggttgagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattaagcccgaattttaatag 5114965  T
Q  174 ggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5114966 ggctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5115049  T

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Target: chr1; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 40601891 - 40601710
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |    
T  40601891 gtagagctgtcaaaacgggccggcccgtatgggccggcccgtttaacccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagag 40601792  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40601791 ctttttagcccggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 44373041 - 44372860
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||| | || |||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||    
T  44373041 gtagagctgtcaaaacggaccggcccatatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaataggg 44372942  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| |||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  44372941 ctttttagcccggcccttaaaagtccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 44372860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 48812697 - 48812516
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  48812697 gtagagctgtcaaaacgggccggcccgtatgggccgtcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 48812598  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| |||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48812597 ctttttagcccgacccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48812516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 30723300 - 30723444
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  30723300 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 30723399  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30723400 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 30723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 19406610 - 19406790
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| |||||||| |||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  19406610 tagagttgtcaaaatgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 19406709  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  19406710 tttttagcccggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccgttagcccgcataac 19406790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 39995616 - 39995436
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || |  ||||| |||  |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||     
T  39995616 tagagctgtcaaaacgggtcggtctgtatgggccggtccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagggc 39995517  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  39995516 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgagtagcccgttagcccgcataac 39995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 41310649 - 41310505
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| |||| |||    
T  41310649 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgtta 41310550  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  41310549 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41310505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 28199180 - 28199347
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || |  ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||    
T  28199180 gtagagctgtcaaaacgggccggcctgtatgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaatttgaataggg 28199279  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| ||||||||||||||||| ||||||||| ||||||||||| |||| |||||||||||||||||    
T  28199280 ctttttagcccggcccttaaaagcccggtacccgttagggctagctcgaatgggccgcgggtagcccg 28199347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 1858895 - 1858752
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  1858895 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 1858796  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| |||||||||||||||||||||||||||    
T  1858795 ggctggcccgaatgggacgcgggtagcccgttagcccgcataac 1858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 699871 - 700051
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | || || ||||| |||||||||||||||||| ||| ||||||| |||| ||| ||||||| ||||| |||||||||||||     
T  699871 tagagctgtcaaaacggaccgggccgtatgggccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccaaattttaatagggc 699970  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||||| |||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  699971 tttttagcccgaccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 700051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 48913581 - 48913724
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||  |||||||||||||||| ||||  |||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  48913581 ccgtttaatccgaataaatatagggcttgggtctaaaatattgagcctgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttag 48913680  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||| ||||||||||||||||||| |||||||||||    
T  48913681 ggctagcccgaatgggccgcgggtagcccgttggcccgcataac 48913724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 44922154 - 44922335
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||  |||||||||||| | ||| |||| || |||| ||| ||||||| |||||||||||||||||||    
T  44922154 gtagagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccaattaattataaggcttgggccttaaatattgagcccgaattttaataggg 44922253  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  44922254 ctttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44922335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 35985613 - 35985469
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| ||||||| |||| ||| ||||||| || |||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  35985613 cccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggctttttagcccggccctaaaaagcccggtacccatta 35985514  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  35985513 gggctaacccgaacgggccgcgggtagcccgttagcccgcataac 35985469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 50512137 - 50511957
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| |||| || || ||||| ||| ||| |||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||     
T  50512137 tagagctgtcaaaatgggccgggccgtatgggccggcccatttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggc 50512038  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| ||||| ||||||||||||||||||||||  |||||||||| |||||||||||||    
T  50512037 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccaagggtagcccgctagcccgcataac 50511957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 33815087 - 33814903
Alignment:
Q  72 gcaggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaat 171  Q
    |||| |||||||||||||||||||  | || ||||| |||  ||||||||||||| ||| ||||||| |||| ||| ||||||| | |||||||||||||    
T  33815087 gcagctagagctgtcaaaacgggccaggccgtatgggccggtccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaattttaat 33814989  T
Q  172 agggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||| |||| |||||| |||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33814988 ggggctttttagcccgaccctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgttagcccgcataac 33814903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 257
Target Start/End: Complemental strand, 33874557 - 33874373
Alignment:
Q  72 gcaggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaat 171  Q
    |||| |||||||||||||||||||  | || ||||| |||  ||||||||||||| ||| ||||||| |||| ||| ||||||| | |||||||||||||    
T  33874557 gcagctagagctgtcaaaacgggccaggccgtatgggccggtccgtttagcccgattaattatagggcttgg-ccttaaatattgaacccgaattttaat 33874459  T
Q  172 agggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||| |||| |||||| |||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33874458 ggggctttttagcccgaccctaaaaagtccgctacccgttagggctagcccgaacgggccgagggtagcccgttagcccgcataac 33874373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 232
Target Start/End: Original strand, 42102156 - 42102308
Alignment:
Q  79 gagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttt 178  Q
    ||||||||||||||||| || || ||||| ||  |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||    
T  42102156 gagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctt 42102255  T
Q  179 ttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccg 232  Q
    || |||||||||||||||||  |||||||| |||||||||| ||||||||||||    
T  42102256 tttagcccggcccttaaaagctcggtacccgttagggctag-ccgaacgggccg 42102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 47034643 - 47034514
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||  ||||    
T  47034643 ccgtttagccggaataaatatagggtttgggtctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagttcggtacctgttag 47034544  T
Q  214 ggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||| |||||||||||||||||    
T  47034543 ggctagcccgaatgggccgcgggtagcccg 47034514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 40412675 - 40412495
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||| | ||| |||||||||||||| ||| |||| || |||| ||| ||||||| |||||||||||||||||||     
T  40412675 tagagctgtcaaaacgggccgggccgtattggccggcccgtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggc 40412576  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | ||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||| | ||||| |||||||    
T  40412575 tttttaacccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcctgctagcctgcataac 40412495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 38235638 - 38235764
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||    ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||    
T  38235638 ccgtttagcccgaataaatatagggcttgagtttaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagtccggtacccgttag 38235737  T
Q  214 ggctagcccgaacgggccgcgggtagc 240  Q
    |||||| ||||| || |||||||||||    
T  38235738 ggctagtccgaatggaccgcgggtagc 38235764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 52929571 - 52929451
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||||     
T  52929571 tagagctgtcaaaacgggccggaccgtatgaatcgacccgtttagcccgaataaatatagggtttgggtctaaaatattgagcccaaattttaataggga 52929472  T
Q  177 ttttcagcccggcccttaaaa 197  Q
    |||| |||||||||| |||||    
T  52929471 tttttagcccggcccgtaaaa 52929451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 45826663 - 45826797
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||||||||||||||||| ||| |||| |  ||||  || ||||||| ||||||||||||||||||| |||| ||||||| ||| |||||||||||||||    
T  45826663 ccgacccgtttagcccgattaattatatgacttgggtcttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagtccggtaccc 45826762  T
Q  209 tttagggctagcccgaacgggccgcgggtagcccg 243  Q
     ||||| ||||||||||||||||||||||||||||    
T  45826763 gttaggactagcccgaacgggccgcgggtagcccg 45826797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 23974338 - 23974159
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||| ||||| ||| || || |||||  || |||||||||| |||||||||||||||||||   |||||||||| ||||||||| |||||||||     
T  23974338 tagagctgttaaaacaggccgggccgtatgggtcggcccgtttagctcgaataaatatagggtttgtgtctaaaatattgagcccgaatgttaatagggc 23974239  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||||||||| ||||||  ||||||||  |||||||| ||| ||||||  |||||||||||||||||| |||||||    
T  23974238 tttttagcccggcccataaaagctcggtaccc-gtagggctaacccaaacgggttgcgggtagcccgttagccagcataac 23974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 25423407 - 25423271
Alignment:
Q  121 gcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagc 220  Q
    |||||| ||| ||||| |||||| ||| ||||||||||||||||||||||||||| |||| |||| |||| | ||||| ||||||||| |||||||||||    
T  25423407 gcccgattaattatagagtttgggccttaaatattaagcccgaattttaatagggctttttagcctggccttaaaaagcccggtacccgttagggctagc 25423308  T
Q  221 ccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||   ||||||||||||||| |||||||    
T  25423307 ccgaacgggccatcggtagcccgttagcctgcataac 25423271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 48940765 - 48940937
Alignment:
Q  76 gtagagctgtcaaaacgggcaggacca-----tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaa 170  Q
    |||||||||||||||||||| |||||      ||||  ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||    
T  48940765 gtagagctgtcaaaacgggccggaccggaccctatgagccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaa 48940864  T
Q  171 tagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||| |||| |||||| |||| ||||| ||  ||||| ||||||||||||||||||||||| ||||||||||    
T  48940865 tagggctttttagcccgaccctaaaaagcccactacccgttagggctagcccgaacgggccgagggtagcccg 48940937  T

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Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 48605962 - 48605821
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||  |||| ||| |||||||||||| ||| ||||||| ||||||||||||||||||  |||| ||||||||| | ||||||||||||  | ||||    
T  48605962 ccgtttattccgattaattatagggtttgggccttaaatattgagcccgaattttaataggactttttagcccggccttaaaaagtccggta-tcgttag 48605864  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  48605863 ggctagtccgaacgggccgcggatagcccgttagcccgcataa 48605821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 243
Target Start/End: Original strand, 20722202 - 20722319
Alignment:
Q  126 aataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaa 225  Q
    ||||| |||||||||| | ||| ||||||| ||||||||||||||||||| |||| ||||||||| | ||||| | ||||||| ||||||||||||||||    
T  20722202 aataattatagggtttaggccttaaatattgagcccgaattttaatagggctttttagcccggccttaaaaagcctggtacccgttagggctagcccgaa 20722301  T
Q  226 cgggccgcgggtagcccg 243  Q
    ||||||||||||||||||    
T  20722302 cgggccgcgggtagcccg 20722319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 21088633 - 21088508
Alignment:
Q  130 aatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacggg 229  Q
    |||||||||||||| | ||||||||| |||||||||||||| |||  |||| ||||||||| ||||||| ||||||||| |||||||||||||||| ||     
T  21088633 aatatagggtttgggcttaaaatattgagcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccgttagggctagcccgaatgga 21088534  T
Q  230 ccgcgggtagcccgttagcccgcata 255  Q
    ||||||||| ||||||||||| ||||    
T  21088533 ccgcgggtaacccgttagcccacata 21088508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 45794240 - 45794063
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||| ||||||||||  || || || || | | |||||||||| ||| ||| ||||||| |||  ||| ||||||| ||| |||||||||||||||    
T  45794240 gtagagctatcaaaacgggtcgggccttacgggctggcccgtttagctcgattaattatagggcttgagccttaaatattgagctcgaattttaataggg 45794141  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| || |||||||| ||||     |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  45794140 ttttttagtccggccctaaaaat----gtacccgttagggctagcccgaacgggccgcgggtagcccgttagccagcataac 45794063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 39003048 - 39003133
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagt 199  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||    
T  39003048 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagt 39003133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 343242 - 343113
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||| | |||||               ||||| |||    
T  343242 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaatagggctttttaacccgg---------------tacccgtta 343158  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  343157 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 343113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 21719945 - 21720051
Alignment:
Q  151 atattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagccc 250  Q
    ||||| |||| |||||||||||||| |||| ||||||| ||| ||||| ||| ||||| |||||||||||| |||| ||||| |||||||||| |||||     
T  21719945 atattgagccggaattttaatagggatttttagcccggtcctaaaaagcccgctacccgttagggctagcctgaacaggccgagggtagcccgctagcct 21720044  T
Q  251 gcataac 257  Q
    |||||||    
T  21720045 gcataac 21720051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 187
Target Start/End: Original strand, 46868747 - 46868821
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccg 187  Q
    |||||||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||| || |||| ||||||    
T  46868747 cccgtttaacccaaataaatatagggtttgggcctaaaatattgagcccgaattttaataaggctttttagcccg 46868821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 25155740 - 25155837
Alignment:
Q  145 cctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagccc 242  Q
    ||||||||||| |||| |||||||||||||| |||  |||||| || ||||||| ||| ||| | ||||||||| ||| |||||||||||||||||||    
T  25155740 cctaaaatattgagcctgaattttaatagggctttgtagcccgacctttaaaagcccgatactcgttagggctaacccaaacgggccgcgggtagccc 25155837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 27414061 - 27414139
Alignment:
Q  145 cctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    ||||||||||| ||||  |||||||||||||||||  ||||||||||||||||  |||||| || ||||||||||||||    
T  27414061 cctaaaatattgagcctaaattttaatagggttttgtagcccggcccttaaaaacccggtatccattagggctagcccg 27414139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 6715284 - 6715105
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| ||||||||  |||||| ||  ||||| ||  ||||||||||||| ||| |||||| ||||||||| ||||||| |||| ||||||||||||       
T  6715284 tagagttgtcaaaattggcagggccggatggatcggtccgtttagcccgattaattatagg-tttggaccttaaatattgagcctgaattttaatagatg 6715186  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| || ||||| || ||||| | | ||| | ||||||||||  ||||| |||||  ||||||||| |||||||| ||||    
T  6715185 tttttagtccggctctaaaaagccagctactcgttagggctagttcgaacaggccgaaggtagcccgctagcccgcgtaac 6715105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 12255347 - 12255175
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| ||||||||||||| || || || || | | |||||||| | ||| ||| ||||||  |||||||| ||||||| ||||||||        |||     
T  12255347 tagagatgtcaaaacgggccgggccgtacggccgggcccgtttacctcgattaagtataggacttggaccttaaatattgagcccgaa--------gggc 12255256  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | ||||||||| ||||| ||||||||| ||||||||||||||||| || ||| |||||| | ||||| ||||||||    
T  12255255 tttttaacccggccctaaaaagcccggtacccattagggctagcccgaacaggtcgcaggtagctcattagcgcgcataac 12255175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 50863952 - 50863858
Alignment:
Q  149 aaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||| ||||| ||||||||||| | |||| ||  ||||||| |||| |||| ||||| |||||||||| |||||||||||| | ||||||||    
T  50863952 aaatattgagcccaaattttaatagagatttttagttcggccctaaaaaatccgctacccgttagggctagtccgaacgggccgagagtagcccg 50863858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 46868829 - 46868876
Alignment:
Q  210 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||| | || ||||||||||||||||||||||||||    
T  46868829 ttagggctagcccgaatgagctgcgggtagcccgttagcccgcataac 46868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 52929442 - 52929413
Alignment:
Q  228 ggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||||||||||||||||||    
T  52929442 ggccgcgggtagcccgttagcccgcataac 52929413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 6266235 - 6266416
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  6266235 gtagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 6266334  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6266335 ctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 6266416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 5927042 - 5927223
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || |||||  || |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  5927042 gtagagctgtcaaaacgggccggcccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 5927141  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  5927142 ctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 5927223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 24101901 - 24101721
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| ||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  24101901 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttcgcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 24101802  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  24101801 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaaagggccgcgagtagcccgttagcccgcataac 24101721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 11202298 - 11202155
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  11202298 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 11202199  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  11202198 ggctagcccgaatgggccgcgggtagcccgttagcccgcataac 11202155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 41395775 - 41395942
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| ||||| ||||| ||| | ||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  41395775 gtagagctgtcaaaacgggccggaccgtatgggccggcacgtgtagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 41395874  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| |||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  41395875 ctttttagcccgacccttaaaagtccggtacccgttagggctagcccgaatgggccgcgggtagcccg 41395942  T

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Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 38231881 - 38231701
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| || |||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  38231881 gtagagctgtcaaaacgggccggcccgtatgggccggcc-gtttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 38231783  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||| | ||||||||||||||||||||||||    
T  38231782 ctttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggctgtgggtagcccgttagcccgcataac 38231701  T

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Target: chr8; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 26098274 - 26098418
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  26098274 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 26098373  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  26098374 gggctagcccgaatgggccgcgggtagcccattagcccgcataac 26098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 41827671 - 41827527
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  41827671 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 41827572  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||||||||||| |||||||||||||||||||||||||||||||    
T  41827571 aggctagcccgaatgggccgcgggtagcccgttagcccgcataac 41827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 76 - 256
Target Start/End: Complemental strand, 42935931 - 42935752
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||| | || || |||||| |  |||||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||||     
T  42935931 gtagagctgtcaaaacggaccggcccgtatggatcagcccgtttaacccgaataaatatagggcttgggcctaaaatattgagcctgaattttaataggt 42935832  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  42935831 ttttt-agcccggcccttaaaagtccggtacccgttagggctagcccgaatgggccgtgggtagcccgttagcccgcataa 42935752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 31895087 - 31894922
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||     
T  31895087 tagagctgtcaaaacgggccggcccatacggaccggcccgtttagcccgaataaatatagggcttgggcctaaa-tattgagcccgaattttaatagggc 31894989  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||    
T  31894988 tttttagcccggcccttaaaagcccggtacccgttagggctaacccgaatgggccgcgggtagcccg 31894922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 40027736 - 40027889
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  40027736 atgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 40027835  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||||| |||| || ||||||||||||||||||||||||||||    
T  40027836 tacccgttagggctagctcgaatggaccgcgggtagcccgttagcccgcataac 40027889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 37819212 - 37819356
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  37819212 cccgtttagcccgaataaatatagggcttcggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 37819311  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  37819312 gggctagcccgaatgggccgggggtagcccgttagcccgcataac 37819356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 28994756 - 28994905
Alignment:
Q  106 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 205  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||  ||||||    
T  28994756 ggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttt-agcccggcccttaaaa-cccggta 28994853  T
Q  206 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28994854 cccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28994905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 14615691 - 14615550
Alignment:
Q  116 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||| ||||||||| ||||||| ||||||||| ||||||    
T  14615691 gtttagcccgaataaatatagggtttgggcctaaaatattgagcctgaattttaataggattttttagcccggcctttaaaagcccggtacccgttaggg 14615592  T
Q  216 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  14615591 ctagcccgaatgggccgcgggtagcccgttagctcgcataac 14615550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 7161575 - 7161715
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||| |||||||    
T  7161575 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccgttagggc 7161674  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  7161675 tagcccgaatgggccgcgggtagtccgttagcccgcataac 7161715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 24476500 - 24476356
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||| |||| ||||||||||||||| | ||||||||| |||    
T  24476500 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaattgggctttttagcccggcccttaaatgcccggtacccgtta 24476401  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  24476400 gggctagcccgaatgggccgcaggtagcccgttagcccgcataac 24476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 15041326 - 15041480
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| |||||||| ||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||| |||    
T  15041326 tatgggccggcccgtttaacccgaataaatatagggcttgggcctaagatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccg 15041425  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  15041426 atacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 15041480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 41644294 - 41644150
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||  |||| ||||||||||||||||| ||||||||| |||    
T  41644294 cccgtttagtccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggcctttttagcccggcccttaaaagcccggtacccgtta 41644195  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  41644194 gggctaacccgaatgggctgcgggtagcccgttagcccgcataac 41644150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 20823656 - 20823477
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || ||||| ||| |||||||||||||| ||| ||||||| |||  ||| ||||||| ||||||||||||| |||||     
T  20823656 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgattaattatagggcttgtgccttaaatattgagcccgaattttagtagggc 20823557  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| |||||| |||| ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20823556 tttttagcccgaccctaaaaagcccggtacccgttagggttagcccgaacgggccgcgggtagcccgttagcccgcataa 20823477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 27640132 - 27639993
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||| |||| ||||||||||||||||| |||||| || |||||||    
T  27640132 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaaatttaatagggctttttagcccggcccttaaaagcccggtatccgttagggc 27640033  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||||||||  |||||||||||||||||||||||||||||    
T  27640032 tagcccgaataggccgcgggtagcccgttagcccgcataa 27639993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 21412435 - 21412589
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| | ||||| |||    
T  21412435 tatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagcccg 21412534  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21412535 gtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21412589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 21806927 - 21807081
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| || ||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||| | ||||| |||    
T  21806927 tatgggccggcctgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggccatcaaaagcccg 21807026  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21807027 gtacccgttagggctaactcgaatgggccgcgggtagcccgttagcccgcataac 21807081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 7433414 - 7433554
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| |||| |||||||    
T  7433414 tttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 7433513  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||| |||| ||||||||| ||||||||||||||||    
T  7433514 tagctcgaatgggctgcgggtagctcgttagcccgcataac 7433554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 37255698 - 37255569
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||| | |||| |||| ||| |||||||| ||||||||| ||||    
T  37255698 ccgtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagagctttttagcctggctcttaaaagcccggtacccgttag 37255599  T
Q  214 ggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||| |||||||||||||||||    
T  37255598 ggctagcccgaatgggccgcgggtagcccg 37255569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 44679273 - 44679145
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||| |||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| |||    
T  44679273 cccgtatagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgtta 44679174  T
Q  213 gggctagcccgaacgggccgcgggtagcc 241  Q
    ||||||||| ||| |||||||||||||||    
T  44679173 gggctagcctgaatgggccgcgggtagcc 44679145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 29940247 - 29940068
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  ||  | ||||| |||  ||||||||||||| ||| ||||| | |||| ||| ||||||| |||||||||||||||||||     
T  29940247 tagagctgtcaaaacgggtcgggtcgtatgggccggtccgtttagcccgattaattatagagattgggccttaaatattgagcccgaattttaatagggc 29940148  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| ||||| ||||| ||||| ||| ||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  29940147 tttttagcccagccctaaaaagcccgctacccgttagggctagcccgagcgggccgagggtagcccgctagcccgcataa 29940068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 356409 - 356589
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || ||||| ||| |||||||| ||||| ||||||||||| |||| ||| ||||||| | |||||||||||||||||     
T  356409 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttaacccgattaaatatagggcttgggccttaaatattgaacccgaattttaatagggc 356508  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||| | |||  | || ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  356509 attttaaccctactctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 356589  T

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Target: chr8; HSP #28
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 77 - 249
Target Start/End: Complemental strand, 40027706 - 40027534
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || ||||| | | |||||||| ||||| ||| ||||||| |||||||| ||||||| | || ||||||||||||||     
T  40027706 tagagctgtcaaaacgggtcgggccgtatgggctggcccgtttaacccgattaattatagggcttggaccttaaatattgaacctgaattttaatagggc 40027607  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcc 249  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||| |||||||||||| || ||||||| |||||    
T  40027606 tttttagcccggccctaaaaagcccggtacccgttagggctagtccgaacgggccgaggttagcccgctagcc 40027534  T

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Target: chr8; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 7764302 - 7764481
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||  ||  || |||||||| |||| ||||||||||||| ||| |||||||||||  ||| ||||||| ||||| |||||||||||||     
T  7764302 tagagctgtcaaaattggtcgggccatatgggccgaaccgtttagcccgattaattatagggtttgagccttaaatattgagcccaaattttaatagggc 7764401  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| |||| |||||| |||||| | ||| || |||||||||| | ||||||| ||||||||||||||||||| ||||||    
T  7764402 tttttagcctggccctaaaaagttcagtatccgttagggctagtctgaacgggacgcgggtagcccgttagcctgcataa 7764481  T

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Target: chr8; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 38894680 - 38894819
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| | |||||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||     
T  38894680 tagagctgtcaaaacgggccgggccgtatgggccggctcgtttagcccgattaaatatagggcttggaccttaaatattgagcccgaattttaatagggc 38894779  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||| |||||| |||| ||||| ||| ||||| |||||||    
T  38894780 tttttagcccgaccctaaaaagcccgctacccgttagggc 38894819  T

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Target: chr8; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 5913259 - 5913405
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||| || || ||||| |||||||||||||||||| ||| ||||||| |||| |||  |||||| |||| ||||||||||||||     
T  5913259 tagagctgtcaaaacaggccggtccgtatgggccgacccgtttagcccgattaattatagggcttgggccttcaatattgagcctgaattttaatagggc 5913358  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    |||| ||| ||||||| ||||| ||| ||||| ||||||||||||||    
T  5913359 tttttagctcggccctaaaaagcccgatacccgttagggctagcccg 5913405  T

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Target: chr8; HSP #32
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 32018318 - 32018472
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||  ||| ||||||| | ||| ||||||||||||| |||| ||||||| ||| |||||  ||    
T  32018318 tatgggccggcccgtttagcccgattaattatagggcttgagccttaaatattgatcccaaattttaatagggctttttagcccggtcctaaaaagctcg 32018417  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||| ||||||||||||||||||||||  |||||||||| |||||||||||||    
T  32018418 ctacccattagggctagcccgaacgggccaagggtagcccgctagcccgcataac 32018472  T

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Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 43067084 - 43067187
Alignment:
Q  136 gggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgg 235  Q
    ||||||||  || ||||||| ||||||||||||||||||| |||| |||||| |||| |||| |||||||||| |||| |||||||||||||||||||||    
T  43067084 gggtttgggtcttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaaatccggtacccgttagagctagcccgaacgggccgcgg 43067183  T
Q  236 gtag 239  Q
    ||||    
T  43067184 gtag 43067187  T

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Target: chr8; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 5924661 - 5924532
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||                |||||||||||| |||    
T  5924661 cccgtttagcccgaataaatatagggtttgggcctaaaatattgaacccgaattttaatagggatttt---------------tagtccggtacccatta 5924577  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||    
T  5924576 gggctagcccgaatgggccgcgggtagtccattagcccgcataac 5924532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 22487439 - 22487330
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||||||||| || ||| ||||||| |||||||| ||||||| |||||||||||||||||||||||| || | |||||| ||||| ||| ||||| ||||    
T  22487439 ccgtttagccagattaattatagggcttggaccttaaatattgagcccgaattttaatagggttttttagtctggccctaaaaagcccgatacccgttag 22487340  T
Q  214 ggctagcccg 223  Q
    || |||||||    
T  22487339 ggttagcccg 22487330  T

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Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 23192839 - 23193019
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| ||||| | || ||||||||| | |||| ||||||| ||| |||||| ||||   || ||||||| || ||||||||| ||| ||     
T  23192839 tagagctgtcaaaaggggcaagcccgtatggaccggcacgttaagcccgattaattataggttttgagacttaaatattgagaccgaatttttataagga 23192938  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | |||| |||| ||||| ||||| ||  || ||||||||||| | ||||||||||||||| || ||||||||||||    
T  23192939 tttttaacccgaccctaaaaagcccggtgccagtttgggctagcccgtatgggccgcgggtagcctgtgagcccgcataac 23193019  T

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Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 957506 - 957592
Alignment:
Q  157 agcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| ||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  957506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggccagcccgaacgggctgagggtagcccg 957592  T

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Target: chr8; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 32925502 - 32925404
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    |||||||||||||||||||  || || ||||||||| |||||||||| ||| ||| |||||||||||| ||| ||||||| ||| ||||||||||||||    
T  32925502 gtagagctgtcaaaacgggtcgggccttatggaccggcccgtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaatagg 32925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 18654488 - 18654541
Alignment:
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18654488 tacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 18654541  T

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Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 34347114 - 34347019
Alignment:
Q  120 agcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    ||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| |||||| |||| ||||| ||||||||| ||||||    
T  34347114 agcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 34347019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 30874246 - 30874177
Alignment:
Q  188 gcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||| ||| ||||| |||| |||||||||||||||||| |||||||||| |||||||||||||    
T  30874246 gccctaaaaagcccgctacccgttagagctagcccgaacgggccgagggtagcccgctagcccgcataac 30874177  T

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Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 20983887 - 20983839
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagccc 161  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  20983887 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagccc 20983839  T

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Target: chr4 (Bit Score: 129; Significance: 9e-67; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 56264559 - 56264379
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  56264559 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 56264460  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  56264459 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 56264379  T

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Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 256
Target Start/End: Complemental strand, 401514 - 401334
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||  ||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  401514 gtagagctgtcaaaataggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 401415  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
     |||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  401414 ctttttagctcggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 401334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 6643449 - 6643269
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| |||||||| |||| ||  | ||||| |||  |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6643449 tagagttgtcaaaatgggccggttcgtatgggccggtccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggt 6643350  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||  |||||||||||||||||    
T  6643349 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtattccgttagcccgcataac 6643269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 19823799 - 19823619
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || ||  |||| ||| |||||||||||||||||||||||||| ||||  |||||||||| ||| |||||||||||||||     
T  19823799 tagagctgtcaaaacgggccgggccgaatgggccggcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcacgaattttaatagggc 19823700  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| || |||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19823699 tttttagaccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtaacccgttagcccgcataac 19823619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 53724827 - 53725007
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  |  |  ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  53724827 tagagctgtcaaaacgggtcgacctgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 53724926  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  53724927 tttttagcccggcccttaaaagcccagtacccattagggctagcccgaatgggccgcgggtagcccgtgagcccgcataac 53725007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 256
Target Start/End: Original strand, 53925306 - 53925485
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||| ||||||||||| || || ||||| |||  |||||||||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||     
T  53925306 tagagctatcaaaacgggccgggccgtatgggccggtccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 53925405  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  53925406 tttttagcccggcccttaaaaatccggtacccgttagggctagcccgaacgggccatgggtagcccgttagcccgcataa 53925485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 35392748 - 35392892
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||| | ||||||||||||||| ||||||||| |||    
T  35392748 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaataggactttttaacccggcccttaaaagcccggtacccgtta 35392847  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35392848 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 35392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 50097395 - 50097539
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||| |||| ||||||||||||||||||| ||||||| |||    
T  50097395 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagtccgaattttaaaagggctttttagcccggcccttaaaagtctggtacccgtta 50097494  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  50097495 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 50097539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 15194480 - 15194623
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  15194480 ccgtttagctcgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 15194579  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  15194580 ggctagcccgaatgggccgcgggtagcccgttagcccgcataac 15194623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 40731358 - 40731191
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||    
T  40731358 gtagagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccggattttaataggg 40731259  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| ||||||||||||||||| ||| ||||| |||||||||| ||||| |||||||||||||||||    
T  40731258 ctttttagcccggcccttaaaagcccgttacccgttagggctagtccgaatgggccgcgggtagcccg 40731191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 51435703 - 51435550
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||| ||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  51435703 atgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 51435604  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  51435603 tacccgttaaggctagcccgaatgggccgcgggtagcccgttagcccgcataac 51435550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 26707027 - 26706883
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||||||| |||    
T  26707027 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgtta 26706928  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  26706927 gggctagcccgaatgggccgcgggtagcccgttagtccgcataac 26706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 54094106 - 54093962
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||| ||||||||||||||||| |||| | ||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  54094106 cccgtttaacccgaataaatatagggcttgggcttaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 54094007  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  54094006 gggctagcccgaatgggctgcgggtagcccgttagcccgcataac 54093962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 19521920 - 19521739
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||  || || ||||  ||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| |||    
T  19521920 gtagagctgtcaaaacgggtcggtccgtatgagccggcccgtttagtccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatgggg 19521821  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||| | ||||||||| ||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  19521820 ctttttagcccagtccttaaaagcccgatacccgttagggctagcccgaatgggccgcgggtaacccgttagcccgcataac 19521739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 24678272 - 24678416
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||| | |||  ||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |||    
T  24678272 cccgtttagcccgaataaatatagagcttgagcctaaaatattgagctcgaattttaatagggttttttagcccggcccttaaaagcccggtacccgtta 24678371  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| | |||||||||||||||||||||||||||||    
T  24678372 gggctagcccgaatgagccgcgggtagcccgttagcccgcataac 24678416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 30000213 - 30000392
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || ||||| || | | |||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||      
T  30000213 tagagctgtcaaaacgggccggcccatacgggcgg-cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaataggcc 30000311  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||| ||||||||||| | ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30000312 tttttagcccagcccttaaaagcctggtacccgttagggctagcccgaatgggccgctggtagcccgttagcccgcataac 30000392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 39240540 - 39240400
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||| ||    
T  39240540 tttagcccgaataaatatagggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagagc 39240441  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  39240440 tagcccgaatgggccgcgggtagcccgttagcccgcataac 39240400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 39809738 - 39809594
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||  ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||    
T  39809738 cccgtttagcccgaataaatatagggcttgagcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtatccgtta 39809639  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | ||||||||||| |||||||||||||||||||||||||||||||    
T  39809638 gagctagcccgaatgggccgcgggtagcccgttagcccgcataac 39809594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 35666583 - 35666713
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| ||||||||| |||    
T  35666583 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttaccccggcccttaaaagcccggtacccgtta 35666682  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||| |||||||||||||||||    
T  35666683 gggctagcccgaatgggccgcgggtagcccg 35666713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 257
Target Start/End: Complemental strand, 56114346 - 56114169
Alignment:
Q  80 agctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttt 179  Q
    |||||||||||||||| || || ||  |||| | ||||||||||||| ||| ||||||| |||| ||| ||||||| ||||  ||||||||||||| |||    
T  56114346 agctgtcaaaacgggccgggccgtacagacctatccgtttagcccgattaattatagggcttgggccttaaatattgagcctaaattttaatagggcttt 56114247  T
Q  180 tcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | ||||||| ||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  56114246 ttagcccggtcctaaaaagcccggtacccgttagggctagcccgaacgggccacgggtagcccgttagcccgcataac 56114169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 1139138 - 1138978
Alignment:
Q  83 tgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttca 182  Q
    ||||||||||||| || || ||||| ||| ||||||||||||||||||||||||||  ||| ||||||||||| ||||| ||||||||||||| |||| |    
T  1139138 tgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcctgggcctaaaatattgagcccaaattttaatagggcttttta 1139039  T
Q  183 gcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||||||  |||||||| ||||||| ||| |||| |||||||||||||||||    
T  1139038 gcccggcccttaaaagctcggtacccgttagggccagctcgaatgggccgcgggtagcccg 1138978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 16623462 - 16623606
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||| ||||| |||    
T  16623462 cccgtttagcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgtta 16623561  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||| | |||||||| |||||||||||||    
T  16623562 gggctagcccgaacgggccgagagtagcccgctagcccgcataac 16623606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 34435894 - 34436037
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||| ||| |||| || |||||||||||||| ||||||||  |||    
T  34435894 cccgtttagcccgaataaatat-gggcttgggcctaaaatattgagcccgaattttaatggggctttttagtccggcccttaaaagcccggtacctgtta 34435992  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  34435993 gggctagcccgaatgggccgcgggtagcctgttagcccgcataac 34436037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 48152681 - 48152847
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || ||  |||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  48152681 gtagagctgtcaaaacgggccggcccggatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 48152780  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| |||               ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48152781 ttttttagc---------------ccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 48152847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 18861751 - 18861623
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||||| |||| ||  ||||||||||||| ||| ||||| |||    
T  18861751 cccgtttagcccgaataaatat--ggtttgggcctaaaatattgagcccgaattttaatagggctttttagttcggcccttaaaagcccgatacccgtta 18861654  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||||||||||||||||||||||    
T  18861653 gggctagcccgaacgggccgcgggtagcccg 18861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 44871639 - 44871486
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    ||||| || |||||||||||||| ||| ||||||||||||  || ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| | |     
T  44871639 atggatcggcccgtttagcccgattaattatagggtttgggtcttaaatattgagctcgaattttaatagggctttttagcccggccctaaaaagcctgc 44871540  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  44871539 tacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 44871486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 109 - 257
Target Start/End: Original strand, 41140601 - 41140749
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||| ||||||||||||| ||| |||| || |||  ||| ||||||| ||||||||||||||||||| |||| | ||||||||| ||||| || ||||||    
T  41140601 ccgatccgtttagcccgattaattataaggcttgagccttaaatattgagcccgaattttaatagggctttttaacccggccctaaaaagccccgtaccc 41140700  T
Q  209 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||||||||||||||||||||||||||||||||||| |||||||||||    
T  41140701 gttagggctagcccgaacgggccgcgggtagcccgttcgcccgcataac 41140749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 13563506 - 13563374
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||            ||||||||||||| ||||||||| |||    
T  13563506 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtacccgtta 13563419  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  13563418 gggctagcccgaatgggccgcgggtagtccgttagcccgcataac 13563374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 32555640 - 32555822
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||  || || ||||| ||  |||||||||||||| ||| ||||||  |||| ||| ||||||| ||| ||||||||||||||    
T  32555640 ggtagagctgtcaaaacgggtcgggccgtatgggccagcccgtttagcccgattaattataggtcttgggccttaaatattgagctcgaattttaatagg 32555739  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | || | ||||||| ||| ||||| ||| ||||| |||||||||| |||||||||||| |||||||||| |||||||||||||    
T  32555740 gcttcttagcccggtcctaaaaagcccgctacccgttagggctagtccgaacgggccgagggtagcccgctagcccgcataac 32555822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 36694222 - 36694112
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||   ||| ||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||| |||    
T  36694222 cccgtttagcccgaataaatataggacatgggcctaaaatattgagcccgaattttaatagggttttttagcccgacccttaaaagcccggtacccgtta 36694123  T
Q  213 gggctagcccg 223  Q
    |||||||||||    
T  36694122 gggctagcccg 36694112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 113 - 254
Target Start/End: Complemental strand, 19474806 - 19474665
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||| ||||| ||| ||||||| |||| ||| ||||||| ||| ||||||||||||||| |||| ||||||||||| ||||| ||||||||| |||    
T  19474806 cccgtttaacccgattaattatagggcttgggccttaaatattgagctcgaattttaatagggctttttagcccggccctaaaaagcccggtacccatta 19474707  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcat 254  Q
    ||||||  ||||||||||||||||||||| ||||||| ||||    
T  19474706 gggctaatccgaacgggccgcgggtagcctgttagccagcat 19474665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 113 - 256
Target Start/End: Complemental strand, 41883259 - 41883116
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| |||||||||||| ||| ||||||| ||| ||||||||||||||| |||| ||||||| ||| ||||| ||| || || |||    
T  41883259 cccgtttagcccgattaattatagggtttgggccttaaatattgagctcgaattttaatagggctttttagcccggacctaaaaagcccgctatccgtta 41883160  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| ||||||||||||||| ||||||| || ||||||||||||    
T  41883159 gggccagcccgaacgggccgagggtagcacgctagcccgcataa 41883116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 56519969 - 56520111
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| |||||| |||| ||||| ||||||||| ||||    
T  56519969 ccgtttagcccgattaattatagggcttggtccttaaatattgagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttag 56520068  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||||| ||||||| || ||||||||||||||| |||||||    
T  56520069 ggatagcccaaacgggctgc-ggtagcccgttagcctgcataac 56520111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 52278955 - 52278776
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || |||||  || |||||||||||||| ||| || |||| |||| ||| ||||||| ||| |||||||||||||||     
T  52278955 tagagctgtcaaaacgggtcgggccgtatgggtcggcccgtttagcccgattaattacagggcttgggccttaaatattgagctcgaattttaatagggc 52278856  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||   |||||| |||| ||||| ||| ||||| |||||||||||||||| |||||  |||||||||| |||||||||||||    
T  52278855 ttcatagcccgaccctaaaaagcccgctacccgttagggctagcccgaa-gggccaagggtagcccgctagcccgcataac 52278776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 33493269 - 33493102
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| | |   || || ||||  ||||||| |||| ||| |||||||||| | ||| ||||||| ||| | ||||||||||| |    
T  33493269 gtagagctgtcaaaacgggcggaattttacgggccgattcgtttagtccgattaattatagggttttggccttaaatattgagctcaaattttaatagag 33493170  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||| ||||| ||||    
T  33493169 ctttttagcccggccctaaaaagtccggtacccgttagggctagtccgaacgggccgtgggtaacccg 33493102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 147 - 257
Target Start/End: Original strand, 49480751 - 49480861
Alignment:
Q  147 taaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgtta 246  Q
    ||||||||| ||||| ||||||||||||| |||| || ||||||||||||||  || ||||   |||||||||| |||||||||||||||||||||||||    
T  49480751 taaaatattgagcccaaattttaatagggctttttagtccggcccttaaaagctcgatacctaatagggctagctcgaacgggccgcgggtagcccgtta 49480850  T
Q  247 gcccgcataac 257  Q
    | |||||||||    
T  49480851 gtccgcataac 49480861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 41831169 - 41831349
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| ||||||||||||| |  || |||||  || |||||||| ||||| |||||||| |||||||| || ||||||| | ||||||| ||||||||      
T  41831169 tagagttgtcaaaacgggccgagccgtatgggtcggcccgtttatcccgattaaatataaggtttggatcttaaatattgaacccgaatattaataggac 41831268  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |  |||| ||| ||||| ||| ||||| |||||||||||||||||||| || ||||| |||| || ||||||||||    
T  41831269 tttttaatccggtcctaaaaagcccgctacccgttagggctagcccgaacgggtcgagggtaacccgctaacccgcataac 41831349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 254
Target Start/End: Original strand, 45849299 - 45849438
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 214  Q
    |||||| ||||| ||| ||||||| |||| ||| ||||||| | |||||||||||||| ||||||| |||||| |||| |||| | |||||||| |||||    
T  45849299 cgtttaacccgattaattatagggcttgggccttaaatattgaacccgaattttaata-ggttttttagcccgaccctaaaaaattcggtacccgttagg 45849397  T
Q  215 gctagcccgaacgggccgc-gggtagcccgttagcccgcat 254  Q
    ||||||| ||| ||||| | |||||||||||||||||||||    
T  45849398 gctagcctgaatgggccacggggtagcccgttagcccgcat 45849438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 16347021 - 16346855
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| ||  | ||||| ||| || |||||||| || ||| |||||||||||| ||| ||||||| |||||||||||||||| ||    
T  16347021 gtagagctgtcaaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaatatgg 16346922  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| |||               ||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16346921 atttttagc---------------ccgatactctttagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 16346855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 51031641 - 51031728
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggccc 191  Q
    |||| ||| ||| |||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||  |||| ||||||||||    
T  51031641 atgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggactttttagcccggccc 51031728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 4709252 - 4709381
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||| |||||||||||||| ||||||   |||||||||| ||||||||||||||||||| |||| |||||||               ||||| |||    
T  4709252 cccgtttaccccgaataaatataaggtttgcgtctaaaatattgagcccgaattttaatagggctttttagcccgg---------------tacccgtta 4709336  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  4709337 gggctagcccgaatgggctgcgggtagcccgttagcccgcataac 4709381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 6366323 - 6366444
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| | || || |  ||||| ||| |||||||| ||||| ||| |||||||||||| ||| ||||||| |||||||||||||||||||     
T  6366323 tagagctgtcaaaatgagccgggctgtatgggccggcccgtttaacccgattaattatagggtttgggccttaaatattgagcccgaattttaatagggc 6366422  T
Q  177 ttttcagcccggcccttaaaag 198  Q
    |||| |||| |||||| |||||    
T  6366423 tttttagcctggccctaaaaag 6366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 42248053 - 42248129
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttttt 180  Q
    |||| |||||||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||| |||||| ||||    
T  42248053 atgggccgacccgtttagcccgattaattatagggtttggaccttaaatattcagcccgaatttttatagggatttt 42248129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 24534741 - 24534651
Alignment:
Q  150 aatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcc 241  Q
    |||||| ||||||||||||||||| |||||| ||||||||| | ||||| ||| ||| | ||||||||||||||||||||||| ||||||||    
T  24534741 aatattgagcccgaattttaatagagttttt-agcccggccttaaaaagcccgctactcattagggctagcccgaacgggccgagggtagcc 24534651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 40227017 - 40226904
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||| ||||||||||| | || || || || ||||||||||||||| || ||| |||||||||||| ||| ||||||| ||  |||||||||||||     
T  40227017 ggtagagatgtcaaaacggactgggccgtacgggccgacccgtttagcctgattaattatagggtttgggccttaaatattgaggtcgaattttaataga 40226918  T
Q  175 gtttttcagcccgg 188  Q
    | |||| |||||||    
T  40226917 gctttttagcccgg 40226904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 42587438 - 42587327
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    |||||||| ||  ||| ||||||| |||| ||||||||||||| ||||| ||| ||||| | ||||| ||   |||| ||||||||||| |||||| |||    
T  42587438 tatagggtctgagccttaaatattgagcctgaattttaataggattttttagctcggccttaaaaagcccaacacccattagggctagctcgaacgagcc 42587339  T
Q  232 gcgggtagcccg 243  Q
    ||||||||||||    
T  42587338 gcgggtagcccg 42587327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 48500377 - 48500306
Alignment:
Q  186 cggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||| ||||  ||||||||||||||||||||||| || ||||||| |||||| ||||||    
T  48500377 cggcccttaaaagcccgctacctgttagggctagcccgaacgggccgaggatagcccgctagcccacataac 48500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 31616660 - 31616494
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| |||||||||| |  || || ||||||||| ||  ||||||||||  || ||||||  |||| | | ||||||| |||| |||||||||||||      
T  31616660 tagagttgtcaaaacgtgtcgggccgtatggaccggcctatttagcccgatcaattataggacttgggctttaaatattgagcctgaattttaataggac 31616561  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||   ||||  ||| ||||| ||||||| | |||||| ||||| |||||||||||||||||||||    
T  31616560 tttttgacccgatcctaaaaagcccggtactcgttagggttagcctgaacgggccgcgggtagcccg 31616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 35013830 - 35013933
Alignment:
Q  140 ttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 239  Q
    |||| ||| ||||||| | |||||||||||||| |  |||| | |||||| || |||||   | ||||| ||||||||||||||||||||||| ||||||    
T  35013830 ttgggccttaaatattgaacccgaattttaatatgactttttaacccggctctaaaaagctagctacccgttagggctagcccgaacgggccgagggtag 35013929  T
Q  240 cccg 243  Q
    ||||    
T  35013930 cccg 35013933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 48500461 - 48500383
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatatt 155  Q
    ||||||||||||||| ||| || |||||||| | | |||||||||||||| ||| ||||||| |||| ||| |||||||    
T  48500461 tagagctgtcaaaacaggccgggccatatgggctggcccgtttagcccgattaattatagggcttgggccttaaatatt 48500383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 20671979 - 20671894
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagccc 161  Q
    ||||||||||||||| || | || || ||||| |||||||||||||||||| ||| |||||||||  | ||| ||||||| |||||    
T  20671979 gtagagctgtcaaaaaggaccgggccgtatgggccgacccgtttagcccgattaattatagggttcaggccttaaatattgagccc 20671894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 8907100 - 8907050
Alignment:
Q  207 cctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||| |||||||| |||||||||||||| ||| |||||||    
T  8907100 cctttggggctagcctgaacgggctgcgggtagcccgttcgcctgcataac 8907050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 245
Target Start/End: Original strand, 31290614 - 31290646
Alignment:
Q  213 gggctagcccgaacgggccgcgggtagcccgtt 245  Q
    |||||||||||| ||||||||||||||||||||    
T  31290614 gggctagcccgaccgggccgcgggtagcccgtt 31290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 243
Target Start/End: Original strand, 32767598 - 32767722
Alignment:
Q  120 agcccgaataaa-tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggcta 218  Q
    |||||||||||| ||||||| |||| ||||| |  |  ||||||||||||   |||| |||| ||||||||||  ||||| |||| |||| ||| |||||    
T  32767598 agcccgaataaaatatagggcttgggcctaataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccggaacccgttaaggcta 32767697  T
Q  219 gcccgaacgggccgcgggtagcccg 243  Q
    |||||  |||||| |||| ||||||    
T  32767698 gcccgttcgggccacgggcagcccg 32767722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 31742840 - 31743022
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||     
T  31742840 ggtagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataga 31742939  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  31742940 gctttttagcccggcccttaaaagcccggtacccattagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 31743022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 27495846 - 27496026
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  27495846 tagagctgtcaaaacggaccggcccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 27495945  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  27495946 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 27496026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 1346390 - 1346246
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  1346390 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgtta 1346291  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  1346290 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 1346246  T

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Target: chr2; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 1002653 - 1002473
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| |||  || || |||||  || ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||     
T  1002653 tagagctgtcaaaatgggtcgggccgtatgggtcggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagctcgaattttaatagggc 1002554  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  1002553 tttttagcccggcccataaaagcccggtacccgttagggctagcccgaacgggccgtgggtagcccattagcccgcataac 1002473  T

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Target: chr2; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 10261308 - 10261452
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||| | |||||||||| ||||||||| |||    
T  10261308 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcctgacccttaaaagcccggtacccgtta 10261407  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  10261408 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 10261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 30555605 - 30555785
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| |||| ||||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||||||    
T  30555605 tagagctgtcaaaacgggccgggccgtatgggccgatccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatagggt 30555704  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| || || ||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  30555705 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacggaccgagggttgcccgctagcccgcataac 30555785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 31618242 - 31618062
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||||||| ||||||| || ||| ||||||| |||| ||| ||||||| |||||||||||||||||||     
T  31618242 tagagctgtcaaaacgggccgggccttatgggccgacccatttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 31618143  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| |||||||| || ||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  31618142 tttttagcccggctctaaaaagcccggtacccgttagggctagtccgaacgggccgcgggtagcccgttagcccgcataac 31618062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 76 - 255
Target Start/End: Original strand, 28222875 - 28223054
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| ||  | ||||| ||| ||  ||||||||||||||||||||||| ||| ||||||||| | |||||||||||||||||||    
T  28222875 gtagagctgtcaaaacgggccgggtcgtatgggccggcctatttagcccgaataaatatagggtctgggcctaaaataatgagcccgaattttaataggg 28222974  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcata 255  Q
     |||| |||||||| |||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  28222975 ctttttagcccggctcttaaaagcccggtacccgttagggctagcccgaacaggccgcgggtagcccgttagtccgcata 28223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 75 - 257
Target Start/End: Complemental strand, 12848013 - 12847831
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||| || || ||||| ||||| |||||| ||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||    
T  12848013 ggtagagctgtcaaaacgggccggcccgtatgggccgacacgtttatcccgattaaatatagggcttgggccttaaatattgagcccgaattttaatagg 12847914  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||| ||||||||||| ||||| ||  ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  12847913 attttttagcccggccctaaaaagcccactacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 12847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 115 - 257
Target Start/End: Complemental strand, 35439646 - 35439504
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 214  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||    
T  35439646 cgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagg 35439547  T
Q  215 gctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||||||| || ||||||||||||||||||||||||||||    
T  35439546 gcaagcccgaagggaccgcgggtagcccgttagcccgcataac 35439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 36240900 - 36240734
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| ||   || || |||||||||  |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||     
T  36240900 tagagctgtcaaaatggatcgggccgtatggaccggtccgtttagcccgaataaatatagggtttgggcataaaatattgagcccgaattttaatagggc 36240801  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  36240800 tttttagcccgacccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccg 36240734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 29810679 - 29810845
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| |  |  ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  29810679 tagagctgtcaaaacgggctgagctgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggga 29810778  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||||||||||||| | ||||||| ||||||||||| |||| |||||||||||||||||    
T  29810779 tttttagcccggcccttaaaagcctggtacccgttagggctagcacgaatgggccgcgggtagcccg 29810845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 10822426 - 10822246
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||     
T  10822426 tagagctgtcaaaacgggtcgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggc 10822327  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  10822326 tttttagcccggccctaaaaaacccggtacccgttagggctagcccgaacgggccgcgggtagcttgttagcccgcataac 10822246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 26984614 - 26984434
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||| ||||| |||||||||||||||| ||| ||||||| || ||||||||||||||||     
T  26984614 tagagctgtcaaaacgggctgggccgtatgggccggcccgtttaccccgattaaatatagggtttgggccttaaatattgagtccgaattttaatagggc 26984515  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | ||||||| | ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  26984514 tttttaacccggccttaaaaagcccgctacccattagggctagcccgaacgggccgagggtagcccgctagcccgcataac 26984434  T

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Target: chr2; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 27551936 - 27552103
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || || || |||||||||||||||||| ||| ||||||| |||| | | ||||||| |||| ||||||||||||||    
T  27551936 gtagagctgtcaaaacgggccgggccttacgggccgacccgtttagcccgattaattatagggcttgggctttaaatattgagcctgaattttaataggg 27552035  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
     |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  27552036 ctttttagcccggccctaaaaagcccggtacccattagggctagcccgaacgggccgcgggtagcccg 27552103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 23334006 - 23334189
Alignment:
Q  76 gtagagctgtcaaaacgggcaggacc--atatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatag 173  Q
    |||||||||||||||||||| || ||  ||| || |||||||||||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||    
T  23334006 gtagagctgtcaaaacgggccgggcccaatagggcccgacccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatag 23334105  T
Q  174 ggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||| || |||||||| ||||| ||| ||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  23334106 ggatttttagtccggccctaaaaagcccgctacccgttagggctagcccgaacggaccgagggtagcccgctagcccgcataac 23334189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 45517162 - 45517306
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||| | |||| |||||| ||| |||||| |||||||||  ||    
T  45517162 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagagctttttagcccgacccataaaagcccggtacccgata 45517261  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  45517262 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 45517306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 10440139 - 10440269
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| ||||||||  |||    
T  10440139 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacctgtta 10440238  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||| |||||||||||||||||    
T  10440239 gggctagcccgaatgggccgcgggtagcccg 10440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 257
Target Start/End: Complemental strand, 38962342 - 38962213
Alignment:
Q  128 taaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacg 227  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||    
T  38962342 taaatatagggcttgagcctaaaatattgagcccgaattttaatagggtttttcagcccggctcttaaaagtccggtacctgttagggctagcccgaacg 38962243  T
Q  228 ggccgcgggtagcccgttagcccgcataac 257  Q
    ||||  ||||||||||||| ||||||||||    
T  38962242 ggccaagggtagcccgttaacccgcataac 38962213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 81 - 257
Target Start/End: Original strand, 41644258 - 41644434
Alignment:
Q  81 gctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttttt 180  Q
    ||||||||||||| | || || ||||||||| ||||||||||||||  || || |||| |||| ||| ||||||| ||||||||||||||||||| ||||    
T  41644258 gctgtcaaaacggaccgggccgtatggaccggcccgtttagcccgataaattacagggcttgggccttaaatattgagcccgaattttaatagggctttt 41644357  T
Q  181 cagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||||| |||| ||||||||| ||||| |||||| |||||||||||||||| |||||||||| |||||||||||||    
T  41644358 tagcccgaccctaaaaagtccgctacccgttaggggtagcccgaacgggccgagggtagcccgctagcccgcataac 41644434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 42799478 - 42799657
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||  |  || ||||| ||||||||||||| |||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||| |    
T  42799478 tagagctgtcaaaacaggttgtgccgtatgggccgacccgtttagaccgattaattatagggcttgggccttaaatattgagcccgaattttaataggtt 42799577  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||| ||||| ||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42799578 tttt-agcccagccctaaaaagcccggtacccgttaggactagcccgaacgggccgcgggtagctcgttagcccgcataac 42799657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 243
Target Start/End: Original strand, 13247727 - 13247857
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||| ||| || | ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  13247727 cccgtttagcccgaataaatatggggcttaggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 13247826  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||| ||| |||||||||||||||||    
T  13247827 gggctagcctgaatgggccgcgggtagcccg 13247857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 30016336 - 30016206
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||| | |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| |||    
T  30016336 cccgtttagtctgaataaatatagggcttgggcctaaaatattaagcccgaattttaatagggctttttagcccagcccttaaaagcccggtacccatta 30016237  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
    ||| ||||||||| |||||||||||||||||    
T  30016236 gggttagcccgaatgggccgcgggtagcccg 30016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 30801318 - 30801174
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||| || | |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  30801318 cccgtttagcccgaataaataaagagcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 30801219  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||| ||||  ||||| |||||| | |||||||||||||||    
T  30801218 gggctagctcgaataggccgtgggtagtcagttagcccgcataac 30801174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 127 - 257
Target Start/End: Complemental strand, 2650186 - 2650055
Alignment:
Q  127 ataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaac 226  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| ||||||||||||||||     
T  2650186 ataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggctagcccgaat 2650087  T
Q  227 ggg-ccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||| |||||||||||||||||||||||    
T  2650086 gggcccgcaggtagcccgttagcccgcataac 2650055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 34313729 - 34313880
Alignment:
Q  106 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 205  Q
    |||||| |||||||||||||| ||| ||||||| |||| ||| ||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| | ||    
T  34313729 ggaccggcccgtttagcccgattaattatagggcttgggccttaaatattaagcccaaattttaatagggctttttagcccggccctaaaaagtctgcta 34313828  T
Q  206 ccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||||||||||| ||||||| || |||||||||| |||||||||||||    
T  34313829 cccgttagggctagcctgaacgggtcgagggtagcccgctagcccgcataac 34313880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 18258172 - 18258032
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| |||||||||||||||||||||||||  |||| ||||||||||| || |||||||||||||||| |||| | ||||||||||||||| |||    
T  18258172 tatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagtccgaattttaatagggctttttaccccggcccttaaaagcccg 18258073  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||| ||||||||| | ||||||||||||| ||||||||    
T  18258072 gtacccgttagggctacctcgaacgggccgcgagtagcccg 18258032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 2557616 - 2557799
Alignment:
Q  74 aggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatag 173  Q
    ||||||||||||||||||| || || || ||||   || ||||||||||| || ||| ||||||| |||| ||| ||||||| |||||||||||||||||    
T  2557616 aggtagagctgtcaaaacgagccgggccgtatgagtcggcccgtttagcctgattaattatagggcttgggccttaaatattgagcccgaattttaatag 2557715  T
Q  174 ggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||||| ||||| ||||| ||||| ||| ||||| ||||||||||||| || ||||||  ||||||||| |||||||||||||    
T  2557716 agttttttagcccagccctaaaaagcccgctacccgttagggctagcccaaatgggccgatggtagcccgctagcccgcataac 2557799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 10709709 - 10709889
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| |||| || || ||||| | | |||||||||||||| ||| ||||||| |||| ||| ||||||| || | ||||||||||||||     
T  10709709 tagagctgtcaaaatgggccgggccgtatgggctggcccgtttagcccgattaattatagggcttgggccttaaatattgagtctgaattttaatagggc 10709808  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| | |||| |||| ||||| ||| ||||| |||||||||||||||||||||||  ||||||||| | |||||||||||    
T  10709809 tttttaacccgaccctaaaaaggccgctacccgttagggctagcccgaacgggccgaaggtagcccgctcgcccgcataac 10709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 19944946 - 19944766
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||  | ||  | || |||||||||||||||||| ||| ||||||| |||  | | ||||||| ||||||| |||||| ||||     
T  19944946 tagagctgtcaaaacgggccaggccgcaggggccgacccgtttagcccgattaattatagggcttgtgctttaaatattgagcccgatttttaagagggc 19944847  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| |||||||||||||   ||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  19944846 tttttagcccggtcctaaaaagtccggtacaaattagggctagcccgaacgggctgcgggtagctcgttagcccacataac 19944766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 25869044 - 25868901
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||| |||| || |||| ||| ||||||| ||||||||||||||||||| |||| ||||||| ||| ||||| ||| || || ||||    
T  25869044 ccgtttagcccgattaattataaggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggtcctaaaaagcccgctatccattag 25868945  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||    
T  25868944 ggctagcccgaacgggccgagggtagcccgctagcccacataac 25868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 37209654 - 37209506
Alignment:
Q  109 ccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||| ||||||| ||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||||||| | ||||||||| ||||    | ||  |    
T  37209654 ccgatccgtttaacccgattaattatagggcttgggcctgaaatattgagcccgaattttaatagggttttttaacccggccctaaaaatcaagatattc 37209555  T
Q  209 tttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37209554 gttagggctaacccgaacgggccgcgggtagcccgttagcccgcataac 37209506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 243
Target Start/End: Original strand, 13311525 - 13311652
Alignment:
Q  116 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    ||||||||||| ||| ||||||| |||| | | ||||||| || |||||||||||| ||| |||| | ||||||||| ||||| ||||||||| ||||||    
T  13311525 gtttagcccgattaattatagggcttgggctttaaatattgagtccgaattttaattgggctttttaacccggccctaaaaagcccggtacccattaggg 13311624  T
Q  216 ctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||||||||||||||||||||||    
T  13311625 ctagcccgaacgggccgcgggtagcccg 13311652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 27258928 - 27258811
Alignment:
Q  140 ttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 239  Q
    |||| ||| ||||||| |||||| |||||||||||| |||| |||||| |||| ||| | ||||||  | ||||||||||||||||||||||||||||||    
T  27258928 ttgggccttaaatattgagcccgtattttaatagggctttttagcccgaccctaaaatgcccggtattcgttagggctagcccgaacgggccgcgggtag 27258829  T
Q  240 cccgttagcccgcataac 257  Q
    ||||||||||||||||||    
T  27258828 cccgttagcccgcataac 27258811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 20932597 - 20932462
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||| |||||||||||||| || |||| ||||||||||| ||||||||||| ||||||| |||| ||||| ||||         ||||| || |||    
T  20932597 cccgtttaacccgaataaatataaggcttgggcctaaaatattgagcccgaatttgaatagggctttttagcccagccc---------cggtatccgtta 20932507  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  20932506 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 20932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 12017599 - 12017480
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||||||||||| |||||||||| |||||||| || |||  ||| ||||||| ||||| |||||||| |||| |||| |||||| |||| ||||| |||     
T  12017599 atggaccgacccatttagcccgattaaatataaggcttgagccttaaatattgagcccaaattttaaaagggctttttagcccgaccctaaaaagcccgc 12017500  T
Q  204 taccctttagggctagcccg 223  Q
    ||||| ||||||||||||||    
T  12017499 tacccgttagggctagcccg 12017480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 9439408 - 9439274
Alignment:
Q  79 gagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttt 178  Q
    ||||||||||||||||| || || || || ||| |||||||||||| | ||| ||||||  |||| ||| ||| ||| ||||||||||||||||||| ||    
T  9439408 gagctgtcaaaacgggccgggccctacgggccggcccgtttagcccaattaattataggacttgggccttaaacattgagcccgaattttaatagggctt 9439309  T
Q  179 ttcagcccggcccttaaaagtccggtaccctttag 213  Q
    || ||||||||| | |||| | |||||||| ||||    
T  9439308 tttagcccggccttaaaaaattcggtacccgttag 9439274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 37209036 - 37208889
Alignment:
Q  77 tagagctgtcaaaa-cgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||| || || || || ||||| ||| || ||||||||||| ||| |||| |  |||| ||| ||||||| | |||||||||||||||||    
T  37209036 tagagctgtcaaaaacgagccgggccgtatgggccggcctgtttagcccgattaattatacgacttgggccttaaatattgaccccgaattttaataggg 37208937  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    ||||| | ||||||||| ||||  ||||||||| || ||| |||||||    
T  37208936 ttttttatcccggccctaaaaaacccggtacccgtttgggttagcccg 37208889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 5e-65; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 7949875 - 7949694
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||  ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  7949875 gtagagctgtcaaaacgggccgggccgtatgggccagcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccaaattttaataggg 7949776  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  7949775 ttttttagcccggcccttaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagtcagcataac 7949694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 26264538 - 26264358
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| |||  ||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||     
T  26264538 tagagctgtcaaaacgggccggcccgtatgggccggtccgtttagcccgaataaatatagggcttgggcctaaattattgagcccgaattttaatagggc 26264439  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26264438 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 26264358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 26507198 - 26507378
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||| || |||||||| |||| ||||||| ||||||     
T  26507198 tagagctgtcaaaacgggcaggcccatatgggccggcccgtttagcccgaataaatatagggcttgggccgaaaatattgagcctgaattttgatagggc 26507297  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  26507298 tttttagcccggcccttaaaagcccggtacccgttagggttagaccgaatgggccgcgggtagcccgttagcccgcataac 26507378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 24566188 - 24566369
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||    
T  24566188 gtagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaataggg 24566287  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24566288 ctttttagcccggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24566369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 24607224 - 24607405
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||||    
T  24607224 gtagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaataggg 24607323  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24607324 ctttttagcccggccctaaaaagtccggtacccgttagggcaagcccgaacgggccgcgggtagcccgttagcccgcataac 24607405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 28759482 - 28759338
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  28759482 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 28759383  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  28759382 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 28759338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 20122706 - 20122848
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  20122706 ccgtttagcccgaataaatatagggcttggacctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 20122805  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  20122806 ggctagcccgaatgggccgcgggtaacccgttagcccgcataa 20122848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 39479307 - 39479487
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||| || || || || ||| |||||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||| ||     
T  39479307 tagagctgtcaaaacaggccgggccttacgggccggcccgtttagcccgattaattatagggtttggaccttaaatattgagcccgaattttaatatggc 39479406  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39479407 tttttagcccggccctaaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcgtaac 39479487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 76 - 255
Target Start/End: Complemental strand, 5361320 - 5361142
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    ||||||||||||||| |||  || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  5361320 gtagagctgtcaaaatgggtcgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 5361221  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcata 255  Q
     |||| ||||||||| |||||||  |||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  5361220 ctttttagcccggccgttaaaagcacggtacccgtta-ggctagcccgaacgggccgcgagtagcccgttagcccgcata 5361142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 1840657 - 1840513
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||| |||||||||| |||||| || |||    
T  1840657 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagcccggtatccgtta 1840558  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||||||||| |||||||||||||||||||||||||||||||    
T  1840557 ggactagcccgaatgggccgcgggtagcccgttagcccgcataac 1840513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 16748916 - 16749096
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||  ||| ||  | ||||| |||| | |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||     
T  16748916 tagagctgtcaaaataggccgggtcgtatgggccgatctgtttagcccgaataaatataggatttgggcctaaaatattgagcccgaattttaatagggc 16749015  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||  |||||||||||||||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  16749016 ttttttgcccggcccttaaaagcccgatacccgttagggctagcccgaatgggccgcgggtagcccgttagcccacataac 16749096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 27345374 - 27345231
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||||| ||||    
T  27345374 ccgtttagcccgaataaatatagggcttgggcataaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttag 27345275  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    | |||||||||| |||||||||||||||||||||||||||||||    
T  27345274 gactagcccgaatgggccgcgggtagcccgttagcccgcataac 27345231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 16653904 - 16654048
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||| |||||||||||||| |||| ||| ||||||||||||| || |||||| |||    
T  16653904 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcctgaattttaatagggctttttagcacggcccttaaaagcccagtacccgtta 16654003  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  16654004 gggctagcccgaatgggccgcgggtagccagttagcccgcataac 16654048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 17320331 - 17320511
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || || || ||| |||||||| ||||| ||| || |||| |||| ||| ||||||| |||||| ||||||||||||     
T  17320331 tagagctgtcaaaacgggtcgggccttacgggccggcccgtttaacccgattaattacagggcttgggccttaaatattgagcccggattttaatagggc 17320430  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17320431 tttttagcccggccctaaaaagcccggtacccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 17320511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 18922122 - 18922302
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || | ||| ||| |||||||||||||| ||| ||||||| ||||  || ||||||| |||||||||||||||| |||    
T  18922122 tagagctgtcaaaacgggccgggccgtgtgggccggcccgtttagcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatatggt 18922221  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  18922222 tttttagcccggccctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 18922302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 43320638 - 43320498
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||  ||||||||||||||| || |||||||||||||| | ||||||| |||||||    
T  43320638 tttagcccgaataaatatagggtttgggcttaaaatattgagcccgatatttaatagggttttttagtccggcccttaaaagcctggtacccgttagggc 43320539  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  43320538 tagcccgaatgggccgcgggtagcccgttagcccgcataac 43320498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 7074103 - 7073962
Alignment:
Q  116 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    |||||| |||||||||||||||| |||  ||||||||||| |||||||||||||||||| ||||| || |||| ||||||||||||||||||| ||||||    
T  7074103 gtttagtccgaataaatatagggcttgagcctaaaatattgagcccgaattttaataggattttttagaccggtccttaaaagtccggtacccattaggg 7074004  T
Q  216 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  7074003 ctagtccgaacgggccgcgggtagcccgttagcctgcataac 7073962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 243
Target Start/End: Complemental strand, 2466418 - 2466288
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  2466418 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2466319  T
Q  213 gggctagcccgaacgggccgcgggtagcccg 243  Q
     |||||||||||| || ||||||||||||||    
T  2466318 tggctagcccgaatggaccgcgggtagcccg 2466288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 21162820 - 21162640
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||  |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| |||||||     
T  21162820 tagagctgtcaaaacgggccgggccgtatgggcccgcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21162721  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| ||||| ||| ||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  21162720 tttttagcccggacctaaaaagcccgctacccgttagggccagcccgaacgggccgagggtagcccgctagcccgcataac 21162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 7344836 - 7344656
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | || || ||||| ||| |||||||||||||| ||| ||||||| |||||||| ||||||| |||||||||||||||||||     
T  7344836 tagagctgtcaaaacggaccgggccgtatgggccggcccgtttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggc 7344737  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| | | ||||| ||| ||||| ||||||| ||||||||||| ||| |||||||||  |||||||||||||    
T  7344736 tttttagcccggacttaaaaagcccgctacccgttagggccagcccgaacggaccgagggtagcccactagcccgcataac 7344656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 21151877 - 21151697
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| |||||||     
T  21151877 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21151778  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| ||||| | | ||||| ||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  21151777 tttttagcccggacctaaaaagcctgctacccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21151697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 21159012 - 21158832
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||| |||||||     
T  21159012 tagagctgtcaaaacgggccgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaatttcaatagggc 21158913  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| ||||| ||| || || ||||||| ||||||||||||||  |||||||||| |||||||||||||    
T  21158912 tttttagcccggacctaaaaagcccgctatccgttagggccagcccgaacgggccaagggtagcccgctagcccgcataac 21158832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 2800752 - 2800615
Alignment:
Q  101 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 200  Q
    ||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| ||| ||||||||||||| |    
T  2800752 catatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcc 2800654  T
Q  201 cggtaccctttagggctagcccgaacgggccgcgggtag 239  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  2800653 cggtacccgttaggtctagcccgaacgggccgcgggtag 2800615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 2806921 - 2806784
Alignment:
Q  101 catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtc 200  Q
    ||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||||||||||  ||| ||| ||||||||||||| |    
T  2806921 catatgggccggcccgtttagcccaaataaatatagggtttgggcctaaaatattgagcc-gaattttaatagggccttttagctcggcccttaaaagcc 2806823  T
Q  201 cggtaccctttagggctagcccgaacgggccgcgggtag 239  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  2806822 cggtacccgttaggtctagcccgaacgggccgcgggtag 2806784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 4725139 - 4725320
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||| | || || ||||| |||  ||||||||||||| ||| ||||||| || | ||| ||||||| ||||||||||||||||||    
T  4725139 ggtagagctgtcaaaacggaccgggccgtatgggccggtccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagg 4725238  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||| ||| ||||||||| ||||| ||||||||||||||||||| ||| ||||||| || || ||||||||||    
T  4725239 gttttt-agcccggtcctaaaaagtccgctacccgttagggctagcccgaacggaccgagggtagctcgctaacccgcataac 4725320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 8320643 - 8320477
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||  | ||  | ||| |||||||||||||| ||| ||||||| || | ||| ||||||| |||||||||||||||||||     
T  8320643 tagagctgtcaaaacgggccgggtcttacaggccggcccgtttagcccgattaattatagggcttaggccttaaatattgagcccgaattttaatagggc 8320544  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||||||| |||||  |||||| | ||||||||||||||||||||||||||||||||||    
T  8320543 tttttagcccggccctaaaaagctcggtactcgttagggctagcccgaacgggccgcgggtagcccg 8320477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 17016470 - 17016624
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| |||    
T  17016470 tatgggccggcccgtttagcccgattaattatagggattgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccg 17016569  T
Q  203 gtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||| || ||||||| |||||||||||| |||||||||| |||||| ||||||    
T  17016570 ctacccgtttgggctagaccgaacgggccgagggtagcccgctagcccacataac 17016624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 1463066 - 1463208
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||    |||| ||||||||||| || |||||||||||||||| |||| ||||||||||||||  | ||||||||| |||    
T  1463066 cccgtttagcccgaataaatataaaacttgggcctaaaatattgagtccgaattttaatagggctttttagcccggcccttaa--gcccggtacccgtta 1463163  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||    
T  1463164 gggctagcccgaatgggccgcgggtagcccgttagtccgtataac 1463208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 36682861 - 36682732
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||| ||| ||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||||  |||    
T  36682861 ccgtttagctcgagtaaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagcccggctcttaaaagtccggtacccactag 36682762  T
Q  214 ggctagcccgaacgggccgcgggtagcccg 243  Q
    |||||||||||| ||||| |||||||||||    
T  36682761 ggctagcccgaatgggccacgggtagcccg 36682732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 14506014 - 14505870
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| ||||| | |||| ||| ||||||| |||||| |||||||||||| |||| ||||||||||| ||||||||| ||||| |||    
T  14506014 cccgtttagcccgattaattatagagcttgggccttaaatattgagcccggattttaatagggctttttagcccggccctaaaaagtccgctacccgtta 14505915  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||||||||||| ||| |||||||||| |||||||||||||    
T  14505914 gggttagcccgaacggaccgagggtagcccgctagcccgcataac 14505870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 5494666 - 5494760
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  5494666 ccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccgacccttaaaagtccggtaccc 5494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 24316511 - 24316677
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| ||||  |||  |||||  || |||||||||||| | |||||||||||||||| ||| ||||||| || | ||||||||||||||     
T  24316511 tagagctgtcaaaatgggccagactgtatgggtcggcccgtttagcccaactaaatatagggtttgggccttaaatattgagtctgaattttaatagggc 24316610  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||| ||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||||||    
T  24316611 tttttagcccggtcctaaaaagtccgctacccgttagggctagcccgaacaggccgagggtagcccg 24316677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 243
Target Start/End: Complemental strand, 7827092 - 7826924
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||| | ||||| ||||| ||| |||||||||| ||| ||| ||||||| |||| ||| ||||||| |||||||||||||||||     
T  7827092 ggtagagctgtcaaaacggaccggaccgtatgggccggcccgtttagctcgattaattatagggcttgggccttaaatattgagcccgaattttaatagt 7826993  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    | |||| |||||  |||| |||||  || ||||| |||| |||||||||||||||||| ||||||||||    
T  7826992 gctttttagcccaaccctaaaaagctcgctacccgttagagctagcccgaacgggccgagggtagcccg 7826924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 254
Target Start/End: Original strand, 39048633 - 39048810
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||| ||| || || || |  | | |||||||||||||| ||| |||| || |||  ||| ||||||| | |||||||||||||||||    
T  39048633 gtagagctgtcaaaacaggccgggccttacgtgctggcccgtttagcccgattaattatatggcttgagccttaaatattgaacccgaattttaataggg 39048732  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcat 254  Q
    ||||| |||||| |||| ||||| ||||||||   ||||||||| ||||||||||||||||||||||||||||||||||    
T  39048733 ttttttagcccgaccctaaaaagcccggtacctgctagggctag-ccgaacgggccgcgggtagcccgttagcccgcat 39048810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 38063066 - 38062946
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| || | || || |||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||      
T  38063066 tagagctgtcaaaatggaccgggccgtatggaccgacccgtttaacccgaataaatatagggtttgggcctaaaatattgagctcgaattttaataggcc 38062967  T
Q  177 ttttcagcccggcccttaaaag 198  Q
    |||| |||||||||||||||||    
T  38062966 tttt-agcccggcccttaaaag 38062946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 41203444 - 41203305
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||| ||||||| |||| ||| ||||||| |||    |||||||||||| |||| ||||||||||| || || | ||||||  ||||    
T  41203444 ccgtttagcccgattaattatagggcttgggccttaaatattgagc----attttaatagggctttttagcccggccctaaagagccgggtacctgttag 41203349  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  41203348 ggctagcccgaacgggccgcgggtagcctgttagtccgcataac 41203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 39088998 - 39089070
Alignment:
Q  184 cccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    ||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39088998 cccggcccttaaaagcccggtatccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataa 39089070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 8321755 - 8321827
Alignment:
Q  185 ccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8321755 ccggccctaaaaagcccgatacccgttagggctagcccgaacgggccgcgggtagcccgttagcccacataac 8321827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 6286172 - 6286247
Alignment:
Q  182 agcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||| |||||||| ||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||    
T  6286172 agcccggctcttaaaagcccggtacccgtaagggctagcccgaatgggccgcgggtagtccgttagcccgcataac 6286247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 19647014 - 19646925
Alignment:
Q  168 taatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||| |||| ||||||||||| ||||| ||| ||||| ||||||||||||| ||||||||| |||||||||| | |||| ||||||    
T  19647014 taatagggctttttagcccggccctaaaaagcccgctacccgttagggctagcccaaacgggccgagggtagcccgctggcccacataac 19646925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 256
Target Start/End: Complemental strand, 31878193 - 31878069
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    |||||||||||   || ||||||| ||| |||||||| ||||||||||| ||||||  ||| ||||  ||||||||| |||||| |||||||||| ||      
T  31878193 tatagggtttgagtcttaaatattgagctcgaatttttatagggttttttagcccgatcctcaaaatcccggtacccgttagggatagcccgaaccggtt 31878094  T
Q  232 gcgggtagcccgttagcccgcataa 256  Q
    ||||||||| |||||||| ||||||    
T  31878093 gcgggtagctcgttagcctgcataa 31878069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 77 - 220
Target Start/End: Original strand, 39087644 - 39087786
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| |||| || || ||||| |||||||  |||||| || ||| |||||||||||| ||| ||||||| ||| || ||||||||||||     
T  39087644 tagagctgtcaaaaggggccgg-ccgtatgggccgacccaattagcctgattaattatagggtttgggccttaaatattgagctcggattttaatagggc 39087742  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagc 220  Q
    |||| | ||||| ||| ||||| ||||||| | ||||| |||||    
T  39087743 tttttaacccggtcctaaaaagcccggtactcgttaggactagc 39087786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 9528744 - 9528662
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaa 197  Q
    |||||| ||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| || | ||||||||||| ||||    
T  9528744 cgtttaacccgattaattatagggcttggaccttaaatattgagcccgaattttaatagggcttgttagcccggccctaaaaa 9528662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 39754368 - 39754541
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || || || | |||||||||||||||| ||| ||| ||| |||| |||       | |||| ||||||||||||||     
T  39754368 tagagctgtcaaaacgggccgggccgtacgggctgacccgtttagcccgattaattattgggcttgggcct-------tgagcctgaattttaatagggc 39754460  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||| ||| ||| | ||  ||||| ||||||||||||| ||||||||| |||||| | | ||||| |||||||    
T  39754461 tttttagcccggtcctaaaaggccctctacccgttagggctagccctaacgggccgagggtagtctgctagcctgcataac 39754541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 7726342 - 7726488
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||    ||  |||||||| |||| | ||||||||||| | ||| | |||| ||| ||||||| ||||| ||||||||||||      
T  7726342 tagagctgtcaaaacgggccaacccgaatggaccggcccgataagcccgaataattgtagagcttgggccttaaatattgagcccaaattttaataggac 7726441  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    |||| || |||||||| ||||| | |||| || ||| ||||||||||    
T  7726442 tttttagtccggccctaaaaagccaggtatccgttatggctagcccg 7726488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 39088952 - 39088994
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatatt 155  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  39088952 cccgtttagcccgaataaatatagggcttgggcctaaaatatt 39088994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 5494758 - 5494795
Alignment:
Q  220 cccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  5494758 cccgaatgggccgcgggtagcccgttagtccgcataac 5494795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 6286128 - 6286177
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccg 162  Q
    ||||||||| ||||||||||||| || |||| ||||||||||| ||||||    
T  6286128 cccgtttagtccgaataaatataaggcttgggcctaaaatattgagcccg 6286177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 37471671 - 37471491
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||  |||| ||||||||||| |||||||||||||||||||     
T  37471671 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatataggacttgggcctaaaatattgagcccgaattttaatagggc 37471572  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37471571 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 37471491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 32795678 - 32795858
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||  |||||||||||||||||||||||||| ||||  |||||||||| |||||||||||||||||||     
T  32795678 tagagctgtcaaaacgggccggcccgtatgggccagcccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggc 32795777  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32795778 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 32795858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 24764155 - 24764335
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||  | ||||| ||| ||||||||||| |||||||||||||| |||| |||||||||||  | ||||||||||||||||     
T  24764155 tagagctgtcaaaacgggccgggtcgtatgggccggcccgtttagcctgaataaatatagggcttgggcctaaaatattgtgtccgaattttaatagggc 24764254  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24764255 tttttagcccggcccttaaaagcccggtatccgttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 24764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 36992158 - 36992311
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  36992158 atggaccggcccgtttagcctgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttagcccggcccttaaaagcccgg 36992257  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || || |||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  36992258 tatccgttagggctagcccgaatgggccgcaggtagcccgttagtccgcataac 36992311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 34202771 - 34202628
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  34202771 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcca-aattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 34202673  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34202672 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 34202628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 37085721 - 37085901
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||||| |||||   | || ||||||| ||||||||||||| | |||| ||||||||||| ||||||||||||||||||      
T  37085721 tagagctgtcaaaacgggccggaccgtatgggttggcctgtttagcacgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggac 37085820  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37085821 tttttagcccggcccttaaaagtctggtacccgttagggctagcccgaacgggccgcgggtagcccgttaacccgcataac 37085901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 77 - 256
Target Start/End: Complemental strand, 35528530 - 35528351
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || ||||| || |||  ||||||||||||| ||| ||||||| |||||||| ||||||| | ||||||||||||||||||    
T  35528530 tagagctgtcaaaacgggccgggccatacggtccggtccgtttagcccgattaattatagggcttggaccttaaatattgatcccgaattttaatagggt 35528431  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    |||| ||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35528430 tttttagcccggccctaaaaagcccggtacccgttagggctagcctgaacgggccgcgggtagcccgttagcctgcataa 35528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 47761836 - 47761670
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| ||||||||||||| |  || ||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  47761836 tagagatgtcaaaacgggccgacccgtatggaccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 47761737  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||||  ||||||||||||||||    
T  47761736 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaataggccgcgggtagcccg 47761670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 555872 - 555728
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||| |||||||||  |||||||| |||    
T  555872 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggttttttaacccgggccttaaaagctcggtacccgtta 555773  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  555772 gggctagtccgaacgggccgtgggtagcccgttagcccgcataac 555728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 39560505 - 39560649
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||||| |||    
T  39560505 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgtta 39560604  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  39560605 gggctagcccgaatgggccgcgggtagcccgttcgcccgcataac 39560649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 8613754 - 8613897
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  8613754 ccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 8613853  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||| |||| |||| ||||||||||||||||||||||||||    
T  8613854 ggctagctcgaatgggctgcgggtagcccgttagcccgcataac 8613897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 29507945 - 29508089
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||| |||| || ||||||||||||| | |||||||| |||    
T  29507945 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagctagaattttaatagggctttttagtccggcccttaaaaattcggtacccgtta 29508044  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  29508045 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 29508089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 114 - 253
Target Start/End: Original strand, 3699181 - 3699320
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| | ||||| ||||||||| ||||||||| ||||    
T  3699181 ccgtatagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttaacccggtccttaaaagcccggtacccgttag 3699280  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgca 253  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3699281 ggctagcccgaatgggccgcgggtagcccgttagcccgca 3699320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 30071986 - 30072169
Alignment:
Q  74 aggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatag 173  Q
    |||||||||||||||||| ||  ||  | ||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  30071986 aggtagagctgtcaaaacaggtcgggtcgtatgggccggcccgtttaacccgaataaatatagggcttggacctaaaatattgagcccaaattttaatag 30072085  T
Q  174 ggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |||| ||||| |||||| |||| ||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  30072086 ggctttttagcccagccctttaaagcccgttacccgttagggctaacccgaacgggctgcgggtagcccgttagcccgcataac 30072169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 13598037 - 13598217
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||  | || ||||||| | |||||||||||||| ||| ||||||| |||| ||| ||||||| || ||||||||||||||||     
T  13598037 tagagctgtcaaaacgggccaggccgtatggactggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttaatagggc 13598136  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| || || ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13598137 tttttagcccggccctaaaaagcccgctatccgttagggctagcccgaacgggccgagggtagcccgctagcccgcataac 13598217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 75 - 239
Target Start/End: Original strand, 8781447 - 8781611
Alignment:
Q  75 ggtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagg 174  Q
    ||||||||||||||||||||  || |||||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||    
T  8781447 ggtagagctgtcaaaacgggtcgggccatatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagg 8781546  T
Q  175 gtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag 239  Q
    | |||| ||||||| ||| ||||| ||| ||||| ||||||||||||||||||||||| ||||||    
T  8781547 gctttttagcccggtcctaaaaagcccgctacccgttagggctagcccgaacgggccgagggtag 8781611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 33889180 - 33889360
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||  |  | |||||  || ||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| |     
T  33889180 tagagctgtcaaaacgggccaggtcgtatgggtcggcccgtttagcccgaaaaaatatagggcttgggcctaaaatattgagcccgaattttaatagagc 33889279  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||  | ||||||||||||||||| ||||||| ||||| |||||| |||||||||    
T  33889280 tttttagcccggcccttaaaagcccggtattcgttagggctagcccgaacaggccgcgcgtagctcgttaggccgcataac 33889360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 17195475 - 17195641
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || || || ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| || |||||||||| || ||     
T  17195475 tagagctgtcaaaacgggccgggccttacgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagtccgaattttactatggc 17195574  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17195575 tttttagcccgaccctaaaaagtccggtacccgttagggctagcccgaacgggccgcgggtagcccg 17195641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 5215691 - 5215835
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||||||||   ||||||||| ||| ||||||||||||||| |||| ||||| ||||||||||| |||||| || |||    
T  5215691 cccgtttagcccgaataaatatagggtttgggtttaaaatattgagctcgaattttaatagggctttttagcccagcccttaaaagcccggtatccgtta 5215790  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||  |||| ||||||||||||||||||||||| |||||||    
T  5215791 gggctagttcgaatgggccgcgggtagcccgttagcctgcataac 5215835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 256
Target Start/End: Complemental strand, 33627078 - 33626898
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    ||||||||||||||| |||| || ||||| || ||||||| |||||||| | ||||||||||| |||| ||| ||||||| |||||||||||||||||||    
T  33627078 gtagagctgtcaaaatgggccggcccatacggtccgacccatttagcccaattaaatatagggcttgggccttaaatattgagcccgaattttaataggg 33626979  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
     |||| ||||||||||| ||||  ||| ||||| ||||||||||| ||||||||| | |||||||||| ||||| ||||||    
T  33626978 ctttttagcccggccctaaaaaccccgctacccgttagggctagctcgaacgggctgagggtagcccgctagcctgcataa 33626898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 47099118 - 47099284
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||| ||| ||| || || ||| | |||||||||||||||| ||||||||||||| || | ||||||||||| |||||||||||||| ||||     
T  47099118 tagagctgtcacaacaggccgggccgtataggccgacccgtttagcccaaataaatatagggcttaggcctaaaatattgagcccgaattttaacagggc 47099217  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| |||||||||||||||   | ||||||| |||||||||||||||||||||| |||||||||||    
T  47099218 tttttagcccggcccttaaatacctggtacccgttagggctagcccgaacgggccacgggtagcccg 47099284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 32528115 - 32527976
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    ||||||| || ||| ||||||| |||||||| ||||||| ||||| |||||||||||| ||||| ||||||| ||| ||||||||||||||| |||||||    
T  32528115 tttagcctgattaattatagggcttggaccttaaatattgagcccaaattttaataggcttttt-agcccggtcctaaaaagtccggtacccgttagggc 32528017  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  32528016 tagcccgaacgggccacgggtagcccgttagcctgcataac 32527976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 9697129 - 9696997
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||            ||||||||||||| ||||||||| |||    
T  9697129 cccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatag------------cggcccttaaaagcccggtacccgtta 9697042  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  9697041 gggctagcccgaatgggccgcgggtagtccgttagcccgcataac 9696997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 40685759 - 40685628
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || |||||  || |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  40685759 gtagagctgtcaaaacgggccggtccgtatgggtcggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaataggg 40685660  T
Q  176 tttttcagcccggcccttaaaagtccggtacc 207  Q
     |||| |||||| |||||||||| ||||||||    
T  40685659 ctttttagcccgacccttaaaagcccggtacc 40685628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 33590396 - 33590279
Alignment:
Q  106 ggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggta 205  Q
    |||||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||  |||||    
T  33590396 ggaccggcccgtttagcccgaataaatatagagcttgggcctaaaatatttagcccgaattttaatagggctttttagcccggcccttaaaagctcggta 33590297  T
Q  206 ccctttagggctagcccg 223  Q
    ||| ||||||||||||||    
T  33590296 cccattagggctagcccg 33590279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 42976701 - 42976845
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||| | ||| ||||||| ||||  || ||||||| ||||| ||||||||||||| |||| |||| |||||| |||||   ||||||| |||    
T  42976701 cccgtttagcccaattaattatagggcttgggtcttaaatattgagcccaaattttaatagggctttttagcctggccctaaaaagataggtacccatta 42976800  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42976801 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 42976845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 257
Target Start/End: Complemental strand, 3319143 - 3319007
Alignment:
Q  121 gcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagc 220  Q
    |||||| ||| ||||||| ||||  || ||||||| |||||||||||||||||||| ||| ||||||||||| ||||| ||||||||| |||||||||||    
T  3319143 gcccgattaattatagggcttgggtcttaaatattgagcccgaattttaatagggtcttttagcccggccctaaaaagcccggtacccgttagggctagc 3319044  T
Q  221 ccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||| || |||||||||||  ||||||||||    
T  3319043 ccgaacgggctgcaggtagcccgtttacccgcataac 3319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 15457303 - 15457160
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| ||||||  |||| ||| ||||||| ||||| ||||||||||||| |||| |||| |||||| ||||| ||||||||| |||    
T  15457303 cccgtttagcccgattaattataggccttgggccttaaatattgagcccaaattttaatagggctttttagccgggccctaaaaagcccggtacccgtta 15457204  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||    
T  15457203 gggcta-ccccaacgggccgcgggtagcccgttagctcgcataac 15457160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 31325370 - 31325514
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||| ||||| | |||| ||| ||||||| || ||||||| ||||||||||||| |||||||| || |||| || |||||||  ||    
T  31325370 cccgtttagcccgaataattatagcgcttgggccttaaatattgagtccgaattgtaatagggttttttagcccggcactaaaaactctggtacccgata 31325469  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  31325470 gggctagcccgaatgggctgcgggtagcccattagcccgcataac 31325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 48137357 - 48137246
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| | ||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  48137357 tagagctgtcaaaacgggccgggccgtatgggcagactcgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 48137258  T
Q  177 ttttcagcccgg 188  Q
    |||| |||||||    
T  48137257 tttttagcccgg 48137246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 22791895 - 22791769
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    ||||||| | || ||| ||||||| | |||||||||||||||||||||| |||||| |||| ||||  | ||||||| ||||||||||||||||||||||    
T  22791895 tatagggctcgggccttaaatattgaacccgaattttaatagggttttttagcccgaccctaaaaaacctggtacccgttagggctagcccgaacgggcc 22791796  T
Q  232 gc-gggtagcccgttagcccgcataac 257  Q
    || ||||||||||||||||||||||||    
T  22791795 gcggggtagcccgttagcccgcataac 22791769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 2370869 - 2370744
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 214  Q
    |||||| ||||| ||| ||||||||||||  || ||||||| |||| |||||||||||||| |||| ||| ||||||| ||||||||||||| | |||||    
T  2370869 cgtttaacccgattaattatagggtttgggtcttaaatattgagcctgaattttaatagggctttttagctcggccctaaaaagtccggtactcgttagg 2370770  T
Q  215 gctagcccgaacgggccgcgggtagc 240  Q
    ||||||||||||| ||||||||||||    
T  2370769 gctagcccgaacgagccgcgggtagc 2370744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 21955579 - 21955506
Alignment:
Q  3 ttttgtctcatccattggattgatcagatggtagggaatagagctggcaagatagcaggagataataaggcagg 76  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21955579 ttttgtctcatccattagattgatcagatggtagggaatagagctggcgagatagcaggagataataaggcagg 21955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 34349680 - 34349820
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||||||||| |||| || || || || ||||| ||| || || |||||||    
T  34349680 tttagcccgattaattatagggattggaccttaaatattgagcccgaattttaatagggctttttagtccagctctaaaaagcccgctatccgttagggc 34349779  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||||||| ||| |||||||||||||||||| |||||    
T  34349780 tagtccgaacggaccgagggtagcccgttagcccgtataac 34349820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 34182182 - 34182088
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccc 208  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||| |||| ||||||||||||||||| |||||||||    
T  34182182 cccgtttagcccgaataaatatagggtttgggcctaaaatattgag-ccaaattttaatagggctttttagcccggcccttaaaagcccggtaccc 34182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 254
Target Start/End: Original strand, 36863263 - 36863400
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||| ||| ||| ||||| | |||| ||| ||||||| ||||| |||||| |||||| |||||||||||||||| ||| | | ||||||| |||||||    
T  36863263 tttagcacgattaattatagagcttgggccttaaatattgagccctaatttttatagggcttttcagcccggccctaaaaggccaggtacccgttagggc 36863362  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcat 254  Q
    ||| |||||||||||||||||| ||||||| |||||||    
T  36863363 tagtccgaacgggccgcgggtatcccgttaacccgcat 36863400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 8632778 - 8632903
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    |||||||||||| ||| |||| ||||||||||||||| |||||| |||| ||||||    | ||||| | ||||||| ||||||||||||||||||||||    
T  8632778 tatagggtttgggccttaaattttaagcccgaatttttatagggatttttagcccgagattgaaaagcctggtacccgttagggctagcccgaacgggcc 8632877  T
Q  232 gcgggtagcccgttagcccgcataac 257  Q
    ||||||| ||||||| | ||||||||    
T  8632878 gcgggtaacccgttacctcgcataac 8632903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 46817180 - 46817041
Alignment:
Q  116 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    ||||||| ||| ||| |||||||||||| ||| ||||||| ||| |||||||||||| ||||||| | ||||  ||| |||||||| |||||| ||||||    
T  46817180 gtttagctcgattaattatagggtttgggccttaaatattgagctcgaattttaata-ggttttttaacccgatcctaaaaagtccagtacccattaggg 46817082  T
Q  216 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||  |||||  ||||||||||||||||||||||||    
T  46817081 ctag-ccgagagggccatgggtagcccgttagcccgcataac 46817041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 255
Target Start/End: Complemental strand, 49112476 - 49112335
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagccc-gaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||| ||| ||||||  |||| ||| || |||||| ||| ||||||| | |||| |||| |||||| |||| |||||| |||||||| |||    
T  49112476 ccgtttagcccgattaattataggtcttgggccttaagtattaatccccgaatttttacagggctttt-agcccgaccctaaaaagttcggtacccgtta 49112378  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcata 255  Q
    | |||||||||||||||||||| ||| | ||||||||||||||    
T  49112377 gagctagcccgaacgggccgcgagtatctcgttagcccgcata 49112335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 254
Target Start/End: Original strand, 23108543 - 23108684
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||| || | ||| ||||||| || | ||| ||||||| |||| ||||||||||||| ||||| ||||||| ||| ||||||| |||| || |||    
T  23108543 cccgtttagtccaattaattatagggcttaggccttaaatattcagccggaattttaataggattttttagcccggtcctaaaaagtctggtatccgtta 23108642  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcat 254  Q
     |||||| ||||||||| ||  |||||| |||||||||||||    
T  23108643 tggctagtccgaacgggtcgtaggtagcacgttagcccgcat 23108684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 40683542 - 40683489
Alignment:
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||| |||||    
T  40683542 tacccgttagggctagcccgaatggcccgcgggtagcccgttagcccgtataac 40683489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 18834339 - 18834231
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 214  Q
    |||||||||||| ||| ||||||| |||   || ||||||| ||   |||||||||||||| |||| |||| |||||| |||||| || ||||| |||||    
T  18834339 cgtttagcccgattaattatagggcttgagtcttaaatattgagtttgaattttaatagggctttttagcctggccctaaaaagttcgctacccgttagg 18834240  T
Q  215 gctagcccg 223  Q
    |||||||||    
T  18834239 gctagcccg 18834231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 48949655 - 48949603
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaat 165  Q
    |||||| ||||||||||||||||||| |||| ||||||||||| |||||||||    
T  48949655 cccgttcagcccgaataaatatagggcttgggcctaaaatattgagcccgaat 48949603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 48949602 - 48949549
Alignment:
Q  190 ccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    ||||||||| ||||||||  ||||||||||||| || |||||||||||||||||    
T  48949602 ccttaaaagcccggtacctgttagggctagcccaaatgggccgcgggtagcccg 48949549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 10013386 - 10013252
Alignment:
Q  122 cccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcc 221  Q
    ||||| ||| |||| || |||| ||| ||||||| |||||  ||||| |||||| |||| |||||| |||| |||||  |||||||| || |||||||||    
T  10013386 cccgattaactatacggcttgggccttaaatattgagccctgatttttatagggctttttagcccg-ccctaaaaagcacggtacccgtttgggctagcc 10013288  T
Q  222 cgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || |  ||| | | ||| ||||||||||||||||||    
T  10013287 cgtattggcagtgagtaacccgttagcccgcataac 10013252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 40921678 - 40921631
Alignment:
Q  210 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||||    
T  40921678 ttagggctagcctgaacgggctgagggtagcccgctagcccgcataac 40921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 36643394 - 36643446
Alignment:
Q  171 tagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    ||||| |||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  36643394 tagggctttttaccccggccctaaaaagcccggtacccgttagggctagcccg 36643446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 2703143 - 2702963
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| ||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  2703143 tagagctgtcaaaacgggccggcccgtatgggccggcccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 2703044  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  2703043 tttttagcccggcccttaaaagcccagtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 2702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 17547462 - 17547642
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||      
T  17547462 tagagctgtcaaaacgggccggcccgtatgggccggcccgtttagcccgaataaatatagagcttgggcctaaaatattgagcccgaattttaataggac 17547561  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  17547562 tttttagcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggctagcccgttagcccgcataac 17547642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 79 - 257
Target Start/End: Complemental strand, 29641190 - 29641012
Alignment:
Q  79 gagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttt 178  Q
    ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||    
T  29641190 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctt 29641091  T
Q  179 ttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    || ||||||||||||||||| ||| ||||| ||||||||| |||||| ||||||| ||||||||||| |||||||||||    
T  29641090 tttagcccggcccttaaaagcccgatacccgttagggctatcccgaatgggccgcaggtagcccgttggcccgcataac 29641012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 4171054 - 4170901
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  4171054 atgggccggcccgtttagcccgaataaatatagggtttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccgg 4170955  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4170954 tacccgttagggctagcctgaatgggccgcgggtagcccgttagcccgcataac 4170901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 31511369 - 31511197
Alignment:
Q  79 gagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggttt 178  Q
    ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||    
T  31511369 gagctgtcaaaacgggccggcccgtatgggccgacccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctt 31511270  T
Q  179 ttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccg 251  Q
    || ||||||||||||||||| ||| ||||| ||||||||| ||| || |||||||||||||||||||||||||    
T  31511269 tttagcccggcccttaaaagcccgatacccgttagggctatcccaaatgggccgcgggtagcccgttagcccg 31511197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 26555368 - 26555184
Alignment:
Q  77 tagagctgtcaaaacgggcaggac----catatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaata 172  Q
    ||||||||||||||||||| ||||    ||||||| ||  |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||    
T  26555368 tagagctgtcaaaacgggccggacggcccatatgggccagcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaata 26555269  T
Q  173 gggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||| |||| ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  26555268 gggctttttagcccggcccttaaaagcccggtacccgttagggttagcccgaatgggccgcgggtagccagttagcccgcataac 26555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 2067144 - 2067288
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  2067144 cccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2067243  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  2067244 gggctagcccgaatgggccgcgggtagcccgttagtccgcataac 2067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 78 - 257
Target Start/End: Complemental strand, 15183892 - 15183712
Alignment:
Q  78 agagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtt 177  Q
    |||||||||||||||||| || || ||||| ||| ||||||| ||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||| |    
T  15183892 agagctgtcaaaacgggccgggccgtatgggccggcccgttttgccagaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggct 15183793  T
Q  178 tttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtag-cccgttagcccgcataac 257  Q
    ||| ||||||||| ||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15183792 ttttagcccggcctttaaaagcccggttcccgttagggctagcccgaacgggccgcgggtagccccgttagcccgcataac 15183712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 22988281 - 22988137
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  22988281 cccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 22988182  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  22988181 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 22988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 23800115 - 23800259
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||| ||||||||| |||    
T  23800115 cccgtttagcccgaataaatatagggcttggacctaaaatattgagctcggattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 23800214  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  23800215 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 23800259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 9035210 - 9035066
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    ||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||| ||||||||| |||    
T  9035210 cccgtttagcccgaacaaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcacggcccttaaaagcccggtacccgtta 9035111  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  9035110 gggctatcccgaatgggccgcgggtagcccgttagcccgcataac 9035066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 15068167 - 15067987
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||| | || || |||||  || ||||||||||| |||||||||||||| |||  ||||||||||| |||||||||||||||||||     
T  15068167 tagagctgtcaaaacggaccggcccgtatgggtcggcccgtttagcctgaataaatatagggcttgtgcctaaaatattgagcccgaattttaatagggc 15068068  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||| ||||||||| |||||||| |||| || ||| |||||||||||| ||||||||||||||    
T  15068067 tttttagcccggcccttaaaagcccggtacccgttagggcttgcccaaatgggtcgcgggtagcccattagcccgcataac 15067987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 12577470 - 12577291
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||  || || || || ||| |||||||||||||| ||  ||||||| |||||||| ||||||| |||||||||||||||||||     
T  12577470 tagagctgtcaaaacaggtcgggccttacgggccggcccgtttagcccgattatttatagggcttggaccttaaatattgagcccgaattttaatagggc 12577371  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||| ||||| ||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12577370 tttttagcccagccctaaaaagcctggtacccgttagggctagcccgaac-ggccgcgggtagcccgttagcccgcataac 12577291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 116 - 257
Target Start/End: Complemental strand, 32897227 - 32897086
Alignment:
Q  116 gtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttaggg 215  Q
    ||||||||||| ||| ||||||| |||  ||| ||||||| |||||||||||||||| || |||| ||||| | ||| ||||||||||||||| ||||||    
T  32897227 gtttagcccgattaattatagggcttgagccttaaatattgagcccgaattttaataaggctttttagcccagtcctaaaaagtccggtacccgttaggg 32897128  T
Q  216 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32897127 ctagcccgaacgggccgcgggtagcccgttagcccgcataac 32897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 34178403 - 34178539
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  || || ||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||     
T  34178403 tagagctgtcaaaacgggtcgggccgtatgggccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccaaattttaatagggc 34178502  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    |||| ||||||||||||||||| | ||||||| ||||    
T  34178503 tttttagcccggcccttaaaagcctggtacccgttag 34178539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 29034583 - 29034472
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  29034583 tatagggcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggctagcccgaacgggcc 29034484  T
Q  232 gcgggtagcccg 243  Q
    ||||||||||||    
T  29034483 gcgggtagcccg 29034472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 13835884 - 13836065
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    ||||| |||||||||||||  || || ||| | | |||||||||||||||| ||| ||||||| |||| ||| |||||||||  |||||||||  |||||    
T  13835884 gtagaactgtcaaaacgggacgggccgtataggctgacccgtttagcccgattaattatagggcttgggccttaaatattaaatccgaattttcgtaggg 13835983  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  13835984 ctttttagcccggccctaaaaagcccgatacccgttagggctagcccggacgggccgcagatagcccgttagcccacataac 13836065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 21036030 - 21036196
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||| ||||  |||  |||||  || |||||||||||| | ||||||||| |||||| ||| ||||||| |||||||||||||||||||     
T  21036030 tagagctgtcaaaatgggccagactgtatgggtcggcccgtttagcccaactaaatatagagtttgggccttaaatattgagcccgaattttaatagggc 21036129  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccg 243  Q
    |||| ||||||||| | ||||| | | ||||  ||||||||||||||||||| ||| ||||||||||    
T  21036130 tttttagcccggccttaaaaagcctgctacctgttagggctagcccgaacggaccgagggtagcccg 21036196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 26483659 - 26483784
Alignment:
Q  132 tatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggcc 231  Q
    ||||||| |||  ||| ||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||| |||||||      
T  26483659 tatagggcttgagccttaaatattgagccctaattttaatagggttttttagcccggccctaaaaagtccggtatccgttagggctagcctgaacgggat 26483758  T
Q  232 gcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| | |||||||    
T  26483759 gcggatagcccgttagactgcataac 26483784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 13087706 - 13087817
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatataggg-tttggacctaaaatattaagcccgaattttaataggg 175  Q
    ||||||||||||||||| | || || ||||| |||  ||||||||||||| ||| ||||||| ||||| ||| ||||||| ||||||||||||||||||     
T  13087706 tagagctgtcaaaacggactgggccgtatgg-ccggtccgtttagcccgattaattatagggctttgggccttaaatattgagcccgaattttaatagga 13087804  T
Q  176 tttttcagcccgg 188  Q
     |||| |||||||    
T  13087805 ctttttagcccgg 13087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 28985265 - 28985422
Alignment:
Q  103 tatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    ||||| |||| || || |||| || ||| ||||||  |||| ||| |||| || ||| || ||||| |||||| |||| ||||| ||||| ||||| |||    
T  28985265 tatgggccgatccattaagcctgattaattataggacttgggccttaaattttgagcacggatttttatagggctttttagccctgccctaaaaagcccg 28985364  T
Q  203 gtaccctttagggctagcccgaacgg---gccgcgggtagcccgttagcccgcataac 257  Q
    |||| | |||||||||||||| | ||   ||||| |||||||||||||||||||||||    
T  28985365 gtacacgttagggctagcccgtatgggccgccgccggtagcccgttagcccgcataac 28985422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 13087824 - 13087871
Alignment:
Q  210 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  13087824 ttagggctagcccgaacaggccgcgggtagcccattagcctgcataac 13087871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 2289979 - 2290038
Alignment:
Q  170 atagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacggg 229  Q
    |||||| |||| ||||||||||| |||||  |||||||| |||||||||||| |||||||    
T  2289979 atagggctttttagcccggccctaaaaagctcggtacccgttagggctagcctgaacggg 2290038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 27586 - 27767
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || || ||||| ||| ||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||||    
T  27586 gtagagctgtcaaaacgggccggtccgtatgggccggcccgtttagcccgaataaatataggatttgggtctaaaatattgagcccgaattttaataggg 27685  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     ||||  |||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27686 ctttttcgcccggcccttaaaagcccggtacccgttagggctagcccgaatgggccgcggatagcccgttagcccgcataac 27767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 76 - 257
Target Start/End: Complemental strand, 40205 - 40024
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || ||  |||  ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||    
T  40205 gtagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgaataaatatagggcttgggcctaaaatattgagcccgtattttaataggg 40106  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| ||||||||||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40105 ctttttagcccggcccttaaaagcctggtacccgttagggctagcccgaatgggccgcgggtagcccgttagcccgcataac 40024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 77 - 257
Target Start/End: Original strand, 56195 - 56374
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    |||||||||||||||||||  | || ||||| ||| |||||||| ||||||||||||||||||| || ||||||||||| |||||||||||||||||||     
T  56195 tagagctgtcaaaacgggccaggccgtatgggccggcccgtttatcccgaataaatatagggttggg-cctaaaatattgagcccgaattttaatagggc 56293  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  56294 tttttagcccggcccttaaaatcccggtacccgttagggctagcccgaacgggccgcaggtagcccgttagcccgcataac 56374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 231783 - 231673
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||| ||| ||||| | |||| ||| ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| | | ||||| |||    
T  231783 cccgtttagcccgattaattatagagcttgggccttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcctgctacccgtta 231684  T
Q  213 gggctagcccg 223  Q
    |||||||||||    
T  231683 gggctagcccg 231673  T

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Target: scaffold0664 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 119 - 257
Target Start/End: Complemental strand, 7889 - 7751
Alignment:
Q  119 tagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggcta 218  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||     
T  7889 tagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggctt 7790  T
Q  219 gcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  7789 gcccgaatgggccgcgggtagcccgttaacccgcataac 7751  T

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Target: scaffold1318 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 117 - 257
Target Start/End: Original strand, 950 - 1090
Alignment:
Q  117 tttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggc 216  Q
    |||||||| ||||||||||||| |||| ||||||||||| ||| ||||||||||||||| | || ||||||||||||||||| ||||||||| |||||||    
T  950 tttagcccaaataaatatagggcttgggcctaaaatattgagctcgaattttaatagggctctttagcccggcccttaaaagcccggtacccgttagggc 1049  T
Q  217 tagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  1050 tagcccgaatgggccgcgggtagcccgttagcccgcataac 1090  T

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Target: scaffold0360 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 12914 - 12770
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtacccttta 212  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||| | |||| || |||    
T  12914 cccgtttagcccgaataaatatagggcttgggtctaaaatattgagcccgaattttaatagggctttttagctcggcccttaaaagcctggtatccatta 12815  T
Q  213 gggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  12814 gggctagcccgaatgggccgcgggtagcccgttagcccgcataac 12770  T

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Target: scaffold0831 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 192 - 39
Alignment:
Q  104 atggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccgg 203  Q
    |||| ||| ||||||||||||||||||||||| || ||||  |||||||||| |||| |||||||||||||  |||| ||||||||||||||||||||||    
T  192 atgggccggcccgtttagcccgaataaatataaggattgggtctaaaatattgagcctgaattttaataggaatttttagcccggcccttaaaagtccgg 93  T
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| |||||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  92 tacccgttagggctagcctgaatgggtcgcgggtagcccgttagcccccataac 39  T

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Target: scaffold0661 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 77 - 257
Target Start/End: Complemental strand, 1714 - 1534
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||| ||  || || ||||| ||| |||||||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||| |||     
T  1714 tagagctgtcaaaacaggtcgggccgtatgggccggcccgtttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaattgggc 1615  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||| ||||||||||| ||||| ||| ||||  |||||||||||| |||||||||| |||||||||| |||||||||||||    
T  1614 tttttagcccggccctaaaaagcccgctacctgttagggctagcctgaacgggccgagggtagcccgctagcccgcataac 1534  T

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Target: scaffold0171 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 256
Target Start/End: Complemental strand, 2458 - 2317
Alignment:
Q  115 cgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagg 214  Q
    ||||||| |||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||| ||||  | |||||||| || || ||||||||| |||||    
T  2458 cgtttaggccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggcttttttgtccggccctaaatagcccggtacccgttagg 2359  T
Q  215 gctagcccgaacgggccgcgggtagcccgttagcccgcataa 256  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2358 gctagcccgaacgggccgcgggtagcccgttagcccgcataa 2317  T

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Target: scaffold0173 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 22091 - 21970
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||| ||  | |||||  |||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||     
T  22091 tagagctgtcaaaacgggccggcacgtatgggacgacccatttagcccgaataaatatagggcttgggcctaaaatattgagcccgaattttaatagggc 21992  T
Q  177 ttttcagcccggcccttaaaag 198  Q
    |||| |||||||||||||||||    
T  21991 tttttagcccggcccttaaaag 21970  T

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Target: scaffold1243 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 1976 - 2122
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||||||||||||||||  ||  | ||||| ||  |||||||||||||||||||||||||| |||| ||||||||||| || ||||||||||||||||     
T  1976 tagagctgtcaaaacgggtcgggtcgtatgggccagcccgtttagcccgaataaatatagggcttgggcctaaaatattgagtccgaattttaatagggc 2075  T
Q  177 ttttcagcccggcccttaaaagtccggtaccctttagggctagcccg 223  Q
    | || |||||| |||||| ||| ||||||||| ||||||||||||||    
T  2076 tatttagcccgacccttataagcccggtacccgttagggctagcccg 2122  T

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Target: scaffold0019 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 103222 - 103079
Alignment:
Q  114 ccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttag 213  Q
    ||||||||||||| ||| |||||||||||| | | ||||||| ||||||||||||||||||| |||| ||||||||||| ||||| ||| || || ||||    
T  103222 ccgtttagcccgattaattatagggtttgggctttaaatattgagcccgaattttaatagggctttttagcccggccctaaaaagcccgctatccgttag 103123  T
Q  214 ggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||||||||||||||  | || ||| ||| |||||||||||||    
T  103122 ggctagcccgaacgggttgaggatagtccgctagcccgcataac 103079  T

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Target: scaffold0461 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 2379 - 2501
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || ||  |||  ||| |||||||||||||| ||| ||||||| |||||||| ||||||| |||||||||||||||||||    
T  2379 gtagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaataggg 2478  T
Q  176 tttttcagcccggcccttaaaag 198  Q
     |||| ||||||||||| |||||    
T  2479 ctttttagcccggccctgaaaag 2501  T

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Target: scaffold0461; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 9315 - 9437
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| || ||  |||  ||| |||||||||||||| ||| ||||||| |||||||| ||||||| |||||||||||||||||||    
T  9315 gtagagctgtcaaaacgggctgggccgaatgtgccggcccgtttagcccgattaattatagggcttggaccttaaatattgagcccgaattttaataggg 9414  T
Q  176 tttttcagcccggcccttaaaag 198  Q
     |||| ||||||||||| |||||    
T  9415 ctttttagcccggccctgaaaag 9437  T

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Target: scaffold0583 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 2201 - 2312
Alignment:
Q  77 tagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggt 176  Q
    ||||| ||||||||||||  || || ||||| ||| ||| |||||||||| ||| ||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  2201 tagagttgtcaaaacgggtggggccgtatgggccggcccatttagcccgattaattatagggcttgggccttaaatattgagcccgaattttaatagggt 2300  T
Q  177 ttttcagcccgg 188  Q
    |||| |||||||    
T  2301 tttttagcccgg 2312  T

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Target: scaffold0079 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 76 - 257
Target Start/End: Original strand, 45840 - 46006
Alignment:
Q  76 gtagagctgtcaaaacgggcaggaccatatggaccgacccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaataggg 175  Q
    |||||||||||||||||||| ||  | ||||| ||| || |||||||| || ||| |||||||||||| ||| ||||||| |||||||||||||||| ||    
T  45840 gtagagctgtcaaaacgggctgggacgtatgggccggcctgtttagcctgattaattatagggtttgggccttaaatattgagcccgaattttaatatgg 45939  T
Q  176 tttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
     |||| |||               ||| ||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  45940 atttttagc---------------ccgatactctttagggctagcccgaacgggccgcgggttgcccgatagcccgcataac 46006  T

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Target: scaffold0951 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 257
Target Start/End: Original strand, 1541 - 1645
Alignment:
Q  151 atattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccggtaccctttagggctagcccgaacgggccgcgggtagcccgttagccc 250  Q
    ||||| ||||| |||||| ||||| ||||| | ||||||||| ||||||| ||||||| ||||| ||||||| ||||||||||||||||||| |||||||    
T  1541 atattgagccctaatttttataggttttttaa-cccggccctaaaaagtc-ggtacccgttaggtctagccctaacgggccgcgggtagccctttagccc 1638  T
Q  251 gcataac 257  Q
     ||||||    
T  1639 acataac 1645  T

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Target: scaffold0021 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 125964 - 125875
Alignment:
Q  113 cccgtttagcccgaataaatatagggtttggacctaaaatattaagcccgaattttaatagggtttttcagcccggcccttaaaagtccg 202  Q
    |||||||||||||| ||| |||||||  ||| ||| ||||||| |||| |||||||||||||| |||| ||||||||||| |||||||||    
T  125964 cccgtttagcccgattaattatagggcctgggccttaaatattgagcctgaattttaatagggctttttagcccggccctaaaaagtccg 125875  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 121002 - 120949
Alignment:
Q  204 taccctttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    ||||| ||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  121002 tacccgttagggctaacccgaacgggccgatggtagcccgctagcccgcataac 120949  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 51417 - 51464
Alignment:
Q  210 ttagggctagcccgaacgggccgcgggtagcccgttagcccgcataac 257  Q
    |||||||||||| |||||||| | |||||||||| |||||||||||||    
T  51417 ttagggctagcctgaacgggctgagggtagcccgctagcccgcataac 51464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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