View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10319_low_33 (Length: 284)

Name: NF10319_low_33
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10319_low_33
NF10319_low_33
[»] chr8 (46 HSPs)
chr8 (1-269)||(19729341-19729609)
chr8 (127-247)||(12670242-12670362)
chr8 (125-247)||(30454087-30454209)
chr8 (131-228)||(36720838-36720935)
chr8 (132-228)||(44530191-44530287)
chr8 (133-228)||(26954175-26954272)
chr8 (126-228)||(39460985-39461089)
chr8 (128-228)||(8897757-8897857)
chr8 (157-228)||(2626564-2626635)
chr8 (157-228)||(13160743-13160814)
chr8 (141-228)||(29521691-29521778)
chr8 (134-228)||(28817625-28817719)
chr8 (162-228)||(29877136-29877202)
chr8 (132-218)||(31457224-31457310)
chr8 (134-228)||(35261721-35261815)
chr8 (136-228)||(45071306-45071398)
chr8 (133-228)||(12625932-12626027)
chr8 (162-247)||(20869527-20869610)
chr8 (134-228)||(20869965-20870061)
chr8 (123-224)||(7136515-7136618)
chr8 (135-228)||(16225061-16225156)
chr8 (157-228)||(8483960-8484031)
chr8 (134-209)||(26102578-26102653)
chr8 (134-228)||(6760864-6760960)
chr8 (135-224)||(17823622-17823711)
chr8 (134-228)||(20284068-20284164)
chr8 (134-228)||(21070696-21070792)
chr8 (134-228)||(25250564-25250660)
chr8 (164-228)||(5135318-5135382)
chr8 (148-224)||(5689677-5689753)
chr8 (165-224)||(24365089-24365148)
chr8 (134-228)||(10857871-10857965)
chr8 (134-213)||(16013511-16013592)
chr8 (185-230)||(23286375-23286420)
chr8 (178-228)||(43942366-43942418)
chr8 (181-228)||(44742564-44742612)
chr8 (141-228)||(18164766-18164853)
chr8 (162-228)||(22598199-22598265)
chr8 (134-228)||(36918166-36918260)
chr8 (146-225)||(44781515-44781596)
chr8 (163-228)||(389687-389752)
chr8 (171-228)||(11000985-11001042)
chr8 (183-223)||(26457776-26457816)
chr8 (136-195)||(27507985-27508044)
chr8 (165-228)||(17250905-17250970)
chr8 (179-228)||(23000263-23000312)
[»] scaffold0015 (1 HSPs)
scaffold0015 (133-247)||(48632-48746)
[»] chr7 (52 HSPs)
chr7 (133-247)||(21172007-21172121)
chr7 (135-247)||(10693073-10693185)
chr7 (134-230)||(42391099-42391195)
chr7 (134-247)||(32758282-32758395)
chr7 (135-230)||(48735122-48735217)
chr7 (130-230)||(31591104-31591204)
chr7 (148-247)||(42476894-42476993)
chr7 (157-228)||(38604568-38604639)
chr7 (148-247)||(47077868-47077967)
chr7 (134-228)||(7879680-7879774)
chr7 (130-228)||(18512448-18512546)
chr7 (134-228)||(42798711-42798805)
chr7 (142-228)||(2541026-2541112)
chr7 (136-230)||(11741833-11741927)
chr7 (134-228)||(27629676-27629770)
chr7 (154-247)||(2662955-2663047)
chr7 (171-228)||(33871946-33872003)
chr7 (134-228)||(42805566-42805662)
chr7 (165-221)||(28362175-28362231)
chr7 (135-228)||(47716501-47716596)
chr7 (157-228)||(19266492-19266563)
chr7 (157-228)||(34626230-34626301)
chr7 (133-228)||(35787267-35787362)
chr7 (148-248)||(18747506-18747609)
chr7 (179-228)||(19265856-19265905)
chr7 (157-218)||(27889338-27889399)
chr7 (163-228)||(28078160-28078225)
chr7 (180-228)||(11617633-11617681)
chr7 (172-228)||(14099043-14099099)
chr7 (172-228)||(14409060-14409116)
chr7 (180-228)||(23419719-23419767)
chr7 (165-228)||(32233165-32233228)
chr7 (157-228)||(40463918-40463989)
chr7 (164-228)||(46354236-46354302)
chr7 (178-228)||(8148988-8149038)
chr7 (142-228)||(35334823-35334909)
chr7 (148-228)||(21566477-21566558)
chr7 (148-221)||(23231606-23231679)
chr7 (164-228)||(1408499-1408563)
chr7 (135-228)||(14732821-14732915)
chr7 (126-209)||(38262187-38262270)
chr7 (157-230)||(13805140-13805214)
chr7 (134-228)||(19426889-19426982)
chr7 (171-228)||(15108433-15108490)
chr7 (147-228)||(21139760-21139841)
chr7 (136-228)||(3469176-3469270)
chr7 (157-228)||(43557514-43557587)
chr7 (196-228)||(12473346-12473378)
chr7 (196-228)||(16341320-16341352)
chr7 (196-228)||(22699031-22699063)
chr7 (162-227)||(33500556-33500623)
chr7 (162-226)||(48123511-48123575)
[»] chr6 (29 HSPs)
chr6 (133-247)||(1354755-1354869)
chr6 (134-230)||(1347002-1347098)
chr6 (134-247)||(26097181-26097294)
chr6 (134-247)||(25557746-25557859)
chr6 (148-230)||(28007666-28007747)
chr6 (134-227)||(29355854-29355949)
chr6 (157-221)||(32579474-32579538)
chr6 (157-228)||(12221937-12222010)
chr6 (126-228)||(9161164-9161268)
chr6 (142-214)||(3815084-3815156)
chr6 (184-228)||(1941897-1941941)
chr6 (129-224)||(18277187-18277282)
chr6 (170-228)||(13905015-13905072)
chr6 (157-228)||(24097623-24097690)
chr6 (132-213)||(23930124-23930205)
chr6 (163-228)||(2755450-2755517)
chr6 (133-214)||(12885967-12886050)
chr6 (141-228)||(15866045-15866130)
chr6 (157-212)||(383782-383837)
chr6 (185-228)||(33138875-33138918)
chr6 (134-225)||(2166409-2166502)
chr6 (134-225)||(2178042-2178135)
chr6 (179-224)||(7947415-7947461)
chr6 (134-213)||(12892064-12892145)
chr6 (182-228)||(14341117-14341163)
chr6 (181-247)||(23240870-23240936)
chr6 (163-228)||(24751101-24751167)
chr6 (134-207)||(13267788-13267861)
chr6 (180-228)||(15865902-15865948)
[»] chr5 (38 HSPs)
chr5 (133-247)||(32703445-32703559)
chr5 (135-229)||(34154814-34154908)
chr5 (162-247)||(8170011-8170096)
chr5 (141-247)||(7368419-7368525)
chr5 (148-228)||(7097773-7097853)
chr5 (133-228)||(41014360-41014455)
chr5 (134-247)||(35710334-35710447)
chr5 (134-228)||(24448932-24449026)
chr5 (149-228)||(27328794-27328875)
chr5 (133-228)||(38879623-38879720)
chr5 (131-228)||(4619100-4619199)
chr5 (157-228)||(43574648-43574719)
chr5 (142-228)||(16880654-16880740)
chr5 (126-228)||(19142934-19143036)
chr5 (135-228)||(13801767-13801862)
chr5 (162-228)||(2838820-2838886)
chr5 (133-210)||(16957374-16957451)
chr5 (134-228)||(43334245-43334340)
chr5 (154-213)||(1405244-1405303)
chr5 (178-228)||(41425990-41426040)
chr5 (135-219)||(1565483-1565566)
chr5 (148-228)||(9794391-9794471)
chr5 (157-225)||(22600499-22600567)
chr5 (148-208)||(22861682-22861742)
chr5 (133-228)||(29334437-29334533)
chr5 (148-228)||(12006341-12006423)
chr5 (164-228)||(20135646-20135712)
chr5 (179-228)||(3771381-3771430)
chr5 (169-220)||(11657733-11657785)
chr5 (134-194)||(16028623-16028683)
chr5 (157-225)||(24323727-24323795)
chr5 (157-225)||(24360351-24360419)
chr5 (179-226)||(30006369-30006416)
chr5 (135-228)||(42924830-42924927)
chr5 (180-228)||(208972-209021)
chr5 (179-219)||(12477164-12477205)
chr5 (183-228)||(22907913-22907958)
chr5 (148-228)||(1850681-1850761)
[»] chr4 (57 HSPs)
chr4 (134-228)||(30639421-30639515)
chr4 (135-230)||(20225022-20225117)
chr4 (141-230)||(29207904-29207993)
chr4 (134-247)||(47528529-47528642)
chr4 (134-247)||(48598824-48598937)
chr4 (134-230)||(9832312-9832408)
chr4 (128-244)||(11054141-11054257)
chr4 (134-228)||(5648300-5648394)
chr4 (134-228)||(47443999-47444093)
chr4 (164-225)||(17043423-17043484)
chr4 (157-229)||(49796838-49796910)
chr4 (162-229)||(10277784-10277851)
chr4 (134-228)||(20639657-20639752)
chr4 (162-228)||(7909308-7909374)
chr4 (134-228)||(25629091-25629185)
chr4 (141-247)||(39077802-39077908)
chr4 (134-228)||(23501829-23501925)
chr4 (136-228)||(6430627-6430719)
chr4 (134-228)||(35567212-35567306)
chr4 (136-226)||(8473621-8473713)
chr4 (134-228)||(13256398-13256494)
chr4 (135-225)||(20225119-20225211)
chr4 (148-228)||(30690189-30690269)
chr4 (134-206)||(38786673-38786745)
chr4 (148-228)||(51865051-51865131)
chr4 (134-228)||(54175105-54175201)
chr4 (148-223)||(9987847-9987922)
chr4 (157-228)||(40915870-40915941)
chr4 (148-221)||(20908649-20908723)
chr4 (141-228)||(21647006-21647095)
chr4 (134-224)||(5306659-5306753)
chr4 (134-228)||(16408600-16408696)
chr4 (148-228)||(19027890-19027970)
chr4 (141-228)||(21489129-21489217)
chr4 (157-228)||(25463164-25463235)
chr4 (179-245)||(47441574-47441642)
chr4 (135-228)||(20405129-20405224)
chr4 (165-228)||(30581495-30581559)
chr4 (135-228)||(44363130-44363225)
chr4 (157-228)||(14983876-14983947)
chr4 (157-229)||(16494258-16494332)
chr4 (132-224)||(16911608-16911702)
chr4 (157-228)||(54967063-54967133)
chr4 (165-223)||(41018824-41018882)
chr4 (157-210)||(49938615-49938669)
chr4 (126-199)||(28494222-28494295)
chr4 (142-228)||(48327770-48327858)
chr4 (160-228)||(12711474-12711542)
chr4 (196-228)||(25343229-25343261)
chr4 (157-228)||(39029082-39029154)
chr4 (186-228)||(14590880-14590922)
chr4 (134-196)||(32484307-32484369)
chr4 (182-228)||(37494893-37494939)
chr4 (180-229)||(17079696-17079745)
chr4 (134-220)||(30352579-30352667)
chr4 (165-221)||(3580870-3580926)
chr4 (191-227)||(55766522-55766558)
[»] chr1 (60 HSPs)
chr1 (124-244)||(45812526-45812646)
chr1 (132-247)||(34725095-34725210)
chr1 (133-230)||(19414500-19414597)
chr1 (134-230)||(35253186-35253282)
chr1 (157-228)||(32632579-32632650)
chr1 (148-247)||(47214555-47214654)
chr1 (134-230)||(12126836-12126932)
chr1 (134-230)||(38478281-38478377)
chr1 (135-228)||(4349703-4349796)
chr1 (133-228)||(41319804-41319899)
chr1 (131-228)||(20004086-20004185)
chr1 (157-228)||(23768342-23768413)
chr1 (134-220)||(23796538-23796624)
chr1 (134-228)||(31382213-31382307)
chr1 (134-228)||(46247952-46248046)
chr1 (130-228)||(30395721-30395821)
chr1 (134-227)||(43768205-43768298)
chr1 (148-228)||(10378748-10378828)
chr1 (157-225)||(15505632-15505700)
chr1 (126-214)||(45402175-45402263)
chr1 (133-226)||(14617105-14617198)
chr1 (142-228)||(18741964-18742052)
chr1 (128-228)||(1517304-1517404)
chr1 (128-228)||(18944708-18944811)
chr1 (134-227)||(27201713-27201808)
chr1 (157-228)||(11596577-11596648)
chr1 (141-228)||(46991869-46991956)
chr1 (134-228)||(50812005-50812099)
chr1 (133-228)||(35005188-35005285)
chr1 (132-248)||(27474324-27474441)
chr1 (131-228)||(10668290-10668389)
chr1 (172-228)||(21910686-21910742)
chr1 (156-224)||(25468284-25468352)
chr1 (157-228)||(18724567-18724638)
chr1 (164-228)||(19932782-19932848)
chr1 (148-228)||(39214971-39215052)
chr1 (148-228)||(45264412-45264493)
chr1 (148-228)||(6925165-6925245)
chr1 (164-228)||(34148989-34149053)
chr1 (182-228)||(6983858-6983904)
chr1 (179-228)||(31442433-31442483)
chr1 (179-221)||(44485153-44485195)
chr1 (191-228)||(4430082-4430119)
chr1 (164-224)||(6358190-6358251)
chr1 (134-228)||(42304206-42304302)
chr1 (148-212)||(4249456-4249520)
chr1 (148-212)||(4249780-4249844)
chr1 (148-212)||(4250104-4250168)
chr1 (196-228)||(17470407-17470439)
chr1 (163-219)||(28894586-28894642)
chr1 (134-198)||(50606498-50606562)
chr1 (133-228)||(20999848-20999943)
chr1 (180-228)||(27136696-27136745)
chr1 (192-228)||(21723748-21723784)
chr1 (196-228)||(22324957-22324989)
chr1 (180-228)||(22930114-22930161)
chr1 (192-228)||(24564409-24564445)
chr1 (144-200)||(33594140-33594196)
chr1 (163-219)||(35019304-35019359)
chr1 (196-228)||(46859131-46859163)
[»] chr3 (54 HSPs)
chr3 (133-228)||(12914033-12914128)
chr3 (136-247)||(22122918-22123029)
chr3 (134-247)||(1217133-1217246)
chr3 (134-230)||(15797282-15797378)
chr3 (135-247)||(31592892-31593004)
chr3 (134-230)||(34771363-34771459)
chr3 (134-228)||(40272811-40272905)
chr3 (132-228)||(16735504-16735600)
chr3 (135-230)||(39203576-39203671)
chr3 (134-228)||(54484755-54484849)
chr3 (134-230)||(26292392-26292488)
chr3 (132-227)||(13628787-13628884)
chr3 (133-228)||(29366718-29366815)
chr3 (148-228)||(6411835-6411915)
chr3 (136-228)||(22609829-22609921)
chr3 (141-228)||(353355-353444)
chr3 (134-228)||(26869770-26869864)
chr3 (142-247)||(7696899-7696999)
chr3 (134-228)||(13730601-13730697)
chr3 (179-228)||(47624105-47624154)
chr3 (134-228)||(49013472-49013568)
chr3 (141-228)||(7943054-7943141)
chr3 (162-228)||(9276328-9276393)
chr3 (157-228)||(46421057-46421130)
chr3 (134-220)||(52926218-52926304)
chr3 (142-228)||(14987021-14987109)
chr3 (163-228)||(26573191-26573256)
chr3 (135-228)||(45786214-45786309)
chr3 (157-228)||(54374367-54374439)
chr3 (185-228)||(4495714-4495757)
chr3 (141-228)||(8247692-8247782)
chr3 (157-228)||(8410889-8410960)
chr3 (157-228)||(9607267-9607340)
chr3 (163-228)||(33926146-33926212)
chr3 (148-228)||(45948851-45948931)
chr3 (134-228)||(516473-516570)
chr3 (157-225)||(10795445-10795515)
chr3 (133-216)||(25517168-25517251)
chr3 (132-195)||(30452892-30452955)
chr3 (134-228)||(53996564-53996659)
chr3 (179-228)||(34420687-34420737)
chr3 (191-228)||(45620884-45620921)
chr3 (134-213)||(829441-829521)
chr3 (134-210)||(24577917-24577993)
chr3 (134-210)||(24578007-24578083)
chr3 (184-228)||(31904906-31904950)
chr3 (134-201)||(24851300-24851367)
chr3 (192-247)||(31831242-31831297)
chr3 (185-228)||(54032609-54032652)
chr3 (178-225)||(45139519-45139568)
chr3 (195-225)||(52428537-52428567)
chr3 (159-228)||(21330270-21330339)
chr3 (183-228)||(33235596-33235641)
chr3 (165-228)||(25944533-25944597)
[»] chr2 (50 HSPs)
chr2 (131-230)||(21779257-21779356)
chr2 (133-247)||(9671202-9671316)
chr2 (134-228)||(10546205-10546299)
chr2 (134-224)||(17623610-17623700)
chr2 (134-247)||(25249737-25249851)
chr2 (132-225)||(8455313-8455406)
chr2 (135-247)||(23397787-23397899)
chr2 (134-228)||(36871534-36871627)
chr2 (135-228)||(10543740-10543835)
chr2 (148-228)||(12023932-12024012)
chr2 (134-221)||(26684619-26684706)
chr2 (157-228)||(32781310-32781381)
chr2 (134-228)||(14444770-14444864)
chr2 (179-228)||(22371096-22371145)
chr2 (132-220)||(11514486-11514573)
chr2 (135-228)||(14530360-14530455)
chr2 (165-228)||(21377103-21377166)
chr2 (157-228)||(30864439-30864510)
chr2 (133-228)||(44643565-44643660)
chr2 (134-224)||(17668048-17668138)
chr2 (134-228)||(30826078-30826171)
chr2 (135-228)||(25632551-25632644)
chr2 (157-228)||(4516373-4516444)
chr2 (134-228)||(25641543-25641637)
chr2 (143-205)||(31523296-31523358)
chr2 (147-228)||(24890453-24890534)
chr2 (135-228)||(25079717-25079810)
chr2 (134-227)||(27573663-27573756)
chr2 (135-228)||(40762234-40762327)
chr2 (144-228)||(99274-99358)
chr2 (180-228)||(5450328-5450376)
chr2 (181-228)||(17896302-17896349)
chr2 (133-228)||(39914304-39914398)
chr2 (133-228)||(5841070-5841167)
chr2 (179-228)||(23145742-23145791)
chr2 (179-228)||(23557532-23557581)
chr2 (134-228)||(24200622-24200718)
chr2 (180-228)||(12315697-12315745)
chr2 (157-221)||(13245117-13245181)
chr2 (148-228)||(19977727-19977807)
chr2 (148-228)||(31821356-31821436)
chr2 (157-228)||(33795327-33795398)
chr2 (162-228)||(17471591-17471658)
chr2 (170-228)||(44449418-44449477)
chr2 (157-228)||(31158461-31158534)
chr2 (191-228)||(2003592-2003629)
chr2 (181-248)||(7214554-7214625)
chr2 (148-217)||(24860001-24860070)
chr2 (148-228)||(39499243-39499323)
chr2 (152-228)||(44521390-44521466)
[»] scaffold0168 (1 HSPs)
scaffold0168 (134-247)||(30600-30713)
[»] scaffold0180 (1 HSPs)
scaffold0180 (134-222)||(24132-24220)
[»] scaffold0057 (4 HSPs)
scaffold0057 (132-230)||(43697-43796)
scaffold0057 (157-228)||(24794-24865)
scaffold0057 (134-228)||(46873-46967)
scaffold0057 (149-223)||(46721-46796)
[»] scaffold0311 (1 HSPs)
scaffold0311 (141-228)||(10852-10939)
[»] scaffold0258 (1 HSPs)
scaffold0258 (134-228)||(13023-13117)
[»] scaffold0223 (1 HSPs)
scaffold0223 (135-247)||(11152-11264)
[»] scaffold0187 (2 HSPs)
scaffold0187 (141-247)||(10056-10162)
scaffold0187 (141-247)||(20384-20490)
[»] scaffold1176 (1 HSPs)
scaffold1176 (128-230)||(1581-1682)
[»] scaffold0049 (1 HSPs)
scaffold0049 (135-228)||(59019-59114)
[»] scaffold0036 (1 HSPs)
scaffold0036 (180-228)||(35062-35110)
[»] scaffold0954 (1 HSPs)
scaffold0954 (148-221)||(3593-3666)
[»] scaffold0018 (1 HSPs)
scaffold0018 (135-228)||(72867-72960)
[»] scaffold0167 (1 HSPs)
scaffold0167 (178-228)||(23641-23691)
[»] scaffold0005 (1 HSPs)
scaffold0005 (186-228)||(226456-226498)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 19729609 - 19729341
Alignment:
Q  1 gaactgtggtgccatcaacaaagtatgaataccattgttcttaatatgacggaaggtgatgccacgaagacggtattaatatgatagaaactggtactca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19729609 gaactgtggtgccatcaacaaagtatgaataccattgttcttaatatgacggaaggtgatgccacgaagacggtattaatatgatagaaactggtactca 19729510  T
Q  101 acgtagggaattatgaacaaagatcatataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttgg 200  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||||| ||| |||||||||||  ||||||||||| ||||||||||    
T  19729509 acgtagggaattatgaacaaagatcatacaaataaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttgg 19729410  T
Q  201 tgtattgtacgcagccttaccctgttttaccaaaaagactgtttccaatatttatgcttaaattctttt 269  Q
    |||||||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||| ||||    
T  19729409 tgtattgtacacagccttaccctgttttacataagagactgtttccaatatttatgcttaaattgtttt 19729341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 12670242 - 12670362
Alignment:
Q  127 tataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt 226  Q
    |||||| ||||||  ||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12670242 tataaaaaaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtt 12670341  T
Q  227 ttaccaaaaagactgtttcca 247  Q
    ||||  || || |||||||||    
T  12670342 ttacacaagaggctgtttcca 12670362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 30454087 - 30454209
Alignment:
Q  125 catataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||||| | |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||| ||||||||||||||| ||    
T  30454087 catatacaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg 30454186  T
Q  225 ttttaccaaaaagactgtttcca 247  Q
    ||||||  || || |||||||||    
T  30454187 ttttacacaagaggctgtttcca 30454209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 36720935 - 36720838
Alignment:
Q  131 aataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||  ||||| || |||||||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36720935 aataaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 36720838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 44530287 - 44530191
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| |||||| ||||| || |||| ||||||| |||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44530287 ataaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 44530191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 26954272 - 26954175
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||||||| || |||| ||||||||||  ||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 26954175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 39460985 - 39461089
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccct 223  Q
    ||||| |||||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||||||||||  |||||||||||||||||||||||| ||    
T  39460985 atatatataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactct 39461084  T
Q  224 gtttt 228  Q
    |||||    
T  39461085 gtttt 39461089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 8897757 - 8897857
Alignment:
Q  128 ataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    ||||| |||||| |||||  ||||| || |||| |||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||| |||    
T  8897757 ataaaaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattt 8897856  T
Q  228 t 228  Q
    |    
T  8897857 t 8897857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 2626635 - 2626564
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||||||||||| |||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  2626635 agctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttt 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 13160814 - 13160743
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13160814 agctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 13160743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 29521691 - 29521778
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||| || |||| ||||||| ||||||| ||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  29521691 caacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgtttt 29521778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 28817625 - 28817719
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||  |||| || |||| ||||||| |||||||  ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgtttt 28817719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 29877202 - 29877136
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29877202 ccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 29877136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 31457310 - 31457224
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctt 218  Q
    |||||||| ||| || ||||| ||||||| ||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  31457310 ataaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagcctt 31457224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 35261815 - 35261721
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||   |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 35261721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 45071398 - 45071306
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||| ||||| |  |||| ||||||| ||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 45071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 12626027 - 12625932
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| ||||| || |||| ||||||| |||||||  |||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttt 12625932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 20869527 - 20869610
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||| |||||||||||||||||||  || || |||||||||    
T  20869527 ccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttcca 20869610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 20870061 - 20869965
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||   |||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 20869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 7136515 - 7136618
Alignment:
Q  123 atcatataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttac 220  Q
    |||| ||||| ||||||  ||||| ||||| || |||| |||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||    
T  7136515 atcaaataaaaaaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttac 7136614  T
Q  221 cctg 224  Q
    ||||    
T  7136615 cctg 7136618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 16225156 - 16225061
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||| || |||| |||||||||| ||||  |||||||| || |||||||  ||||||||||||||||| |||||||||||||    
T  16225156 aaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgtttt 16225061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 8483960 - 8484031
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||||||| |||||||||    
T  8483960 agctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgtttt 8484031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 26102653 - 26102578
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgta 209  Q
    |||||| |||||| ||||| ||||||| ||||||| |||||||  ||||||||||| |||||||||||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 6760960 - 6760864
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||  | ||||||||| |||||||  |||||||||||||| ||||||||||||||||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgtttt 6760864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 17823711 - 17823622
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    ||||| |||||| ||||| || |||| | |||||||||||||| ||||||||||  |||||||||||||||| ||||||| |||| ||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctg 17823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 20284068 - 20284164
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||| ||||| || | || ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||| ||||    
T  20284068 aaaagaacaacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttt 20284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 21070696 - 21070792
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||| ||||| || | || ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||| ||||    
T  21070696 aaaagaacaacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttt 21070792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 25250660 - 25250564
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || | || |||||||||| ||||| ||||||||||| ||||||  |||||||||||||||||||| |||||| ||||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctatttt 25250564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 5135318 - 5135382
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  5135318 gcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctctttt 5135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 5689753 - 5689677
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    ||||| || |||| || |||| ||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  5689753 gtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctg 5689677  T

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Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 24365089 - 24365148
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||| |||||||  ||||||||||| |||||||||||||||||| |||||||||||||||    
T  24365089 catacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctg 24365148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 10857965 - 10857871
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| ||| |||   ||||| |||| ||||| |||||||||||| |||||||||||||||||||    
T  10857965 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttt 10857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 16013592 - 16013511
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca--tttggtgtattgtacgca 213  Q
    ||||||||||||| ||||| || |||| ||||||| ||||||| |||||||||||| |||||  ||| ||||||||||||||    
T  16013592 aaaaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 23286375 - 23286420
Alignment:
Q  185 gggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctgttttac 23286420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 43942418 - 43942366
Alignment:
Q  178 tgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  43942418 tgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 43942366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 44742564 - 44742612
Alignment:
Q  181 gaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttt 44742612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 18164766 - 18164853
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||| || |||| ||||||| |||||||  |||||  |||| || | |||||||||||||||||| ||||||||||||||    
T  18164766 caacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttt 18164853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 22598265 - 22598199
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| ||| |||  ||||| ||||||||||| ||||||||||||||  ||||||||||||||||    
T  22598265 ccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgtttt 22598199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 36918260 - 36918166
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||   ||||||| ||||  ||||||   ||||||||||||||  ||  || |||||||||||||||| |||||||||||||||||    
T  36918260 aaaaggacaaccttttgcattaaagctctcgcatacatagggtttgggaaggaatcctactatttggtgtattgtacacagccttaccctgtttt 36918166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 44781515 - 44781596
Alignment:
Q  146 cagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgt 225  Q
    ||||||| || |||| ||||||| ||||||| ||||| |||||| || |||||  |||||||||||| ||||||||||||||    
T  44781515 cagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgt 44781596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 389752 - 389687
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||  || ||||| || || |||||||||||||||||||| ||||||||||||||    
T  389752 cgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttt 389687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 11000985 - 11001042
Alignment:
Q  171 cagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| ||| ||||||| |||||||||||||||||||| |||||||| | ||||||    
T  11000985 cagggttcgggtaggggtcccaccatttggtgtattgtacacagccttatcttgtttt 11001042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 26457816 - 26457776
Alignment:
Q  183 aggggtctcaccatttggtgtattgtacgcagccttaccct 223  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  26457816 aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 27508044 - 27507985
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca 195  Q
    ||||||||||| ||||| || |||| ||||||| |||||||| ||||||||||| |||||    
T  27508044 aaggacaacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 17250905 - 17250970
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||| ||||| ||||| |||||||  ||||||||||||||| |||||| ||||||||    
T  17250905 catacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgtttt 17250970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 23000263 - 23000312
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| ||||||||||||||||||| | | ||||||| ||||||    
T  23000263 gggaaggggtcccaccatttggtgtattgtatggaaccttaccgtgtttt 23000312  T

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Target: scaffold0015 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 48632 - 48746
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacca 232  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 48731  T
Q  233 aaaagactgtttcca 247  Q
    || || |||||||||    
T  48732 aagaggctgtttcca 48746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 21172007 - 21172121
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacca 232  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 21172106  T
Q  233 aaaagactgtttcca 247  Q
    || || |||||||||    
T  21172107 aagaggctgtttcca 21172121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 10693073 - 10693185
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaa 234  Q
    ||||| |||||||||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacacaa 10693172  T
Q  235 aagactgtttcca 247  Q
     || |||||||||    
T  10693173 gaggctgtttcca 10693185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 42391099 - 42391195
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 42391195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 32758395 - 32758282
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||||  |    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacaca 32758296  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  32758295 agaggctgtttcca 32758282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 135 - 230
Target Start/End: Original strand, 48735122 - 48735217
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttac 48735217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 31591104 - 31591204
Alignment:
Q  130 aaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttta 229  Q
    |||||||||| |||||| ||||| ||||||| ||||||||||| |||  ||||||||||| ||||||||  |||||||||||||||||||| ||||||||    
T  31591104 aaataaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgtttta 31591203  T
Q  230 c 230  Q
    |    
T  31591204 c 31591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 42476993 - 42476894
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    ||||| ||||||| |||||||||||| |  | |||||||||| ||||||||||||||||||||||||||||||| ||||||||  || ||||||||||||    
T  42476993 gtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagagactgtttcca 42476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 38604639 - 38604568
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  38604639 agctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 38604568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 47077868 - 47077967
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    ||||| ||||||| ||||||||| |||||||||||||||||| |||||||| |||||||||||||| | |||| || ||||||  || ||||||||||||    
T  47077868 gtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaactttactctattttacacaagagactgtttcca 47077967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 7879774 - 7879680
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| |  |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 7879680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 18512448 - 18512546
Alignment:
Q  130 aaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||| ||||||||||||  | |||| ||||||| |||||||  ||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  18512448 aaataacagggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccctatttt 18512546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 42798805 - 42798711
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||  |||| || |||| |||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgtttt 42798711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 2541026 - 2541112
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || |||| ||||||| ||||||   ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  2541026 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgtttt 2541112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 136 - 230
Target Start/End: Complemental strand, 11741927 - 11741833
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||| |||||| ||||| ||||||| |||||| |||||  |  |||||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccctattttac 11741833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 27629770 - 27629676
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| |  |||| ||||||||||||||   ||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgtttt 27629676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 247
Target Start/End: Original strand, 2662955 - 2663047
Alignment:
Q  154 tagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    ||||||| ||||||||||||||| ||  ||||| || ||||||||||||||||||||||||||||||||| ||||||  || || |||||||||    
T  2662955 tagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttcca 2663047  T

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Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 33871946 - 33872003
Alignment:
Q  171 cagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  33871946 cagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttt 33872003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 42805662 - 42805566
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||  ||||||||||| |||||||  ||||||||||||| |||||||||||||||||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttt 42805566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 28362175 - 28362231
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  28362175 catatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttacc 28362231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 47716596 - 47716501
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| |||||  | |||| |||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 47716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 19266563 - 19266492
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  |||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  19266563 agctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgtttt 19266492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 34626230 - 34626301
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  |||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  34626230 agctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctgtttt 34626301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 35787267 - 35787362
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| |||||||  |||| ||||||| ||| |||  ||||||||||| | ||||||||||||||||||||| ||||||| ||||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatgtttt 35787362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 18747609 - 18747506
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg---ttttaccaaaaagactgttt 244  Q
    ||||| || |||| ||||||| ||||||||  |||||||||| ||||| |||||||||| |||||||||||||||||   ||||||  ||||| ||||||    
T  18747609 gtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgttt 18747510  T
Q  245 ccaa 248  Q
    ||||    
T  18747509 ccaa 18747506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 19265905 - 19265856
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  19265905 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctctttt 19265856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 27889338 - 27889399
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctt 218  Q
    |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  27889338 agctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagcctt 27889399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 28078160 - 28078225
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| || ||||||||||| ||||||||||||||||| | ||| ||||||||||||||    
T  28078160 cgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctgtttt 28078225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 11617633 - 11617681
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  11617633 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttt 11617681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 14099043 - 14099099
Alignment:
Q  172 agggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  14099043 agggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgtttt 14099099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 14409060 - 14409116
Alignment:
Q  172 agggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  14409060 agggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgtttt 14409116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 23419719 - 23419767
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  23419719 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttt 23419767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 32233165 - 32233228
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||||||||  || |||||||||||||| | ||||| |||||||||||||||    
T  32233165 catatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttt 32233228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 40463989 - 40463918
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  | ||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  40463989 agctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccagtttt 40463918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 46354302 - 46354236
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 46354236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 8148988 - 8149038
Alignment:
Q  178 tgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  8148988 tgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttt 8149038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 35334823 - 35334909
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || |||| | ||||| |||||||  ||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgtttt 35334909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 21566558 - 21566477
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| |||||||||||||||| |||||||||||  |||| ||||||||||||||||||| ||| | |||||||    
T  21566558 gtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgtttt 21566477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 23231679 - 23231606
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    ||||| || |||| ||||||| |||||||| ||||||||||| || |||| |||||||| ||||||||||||||    
T  23231679 gtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttacc 23231606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 1408563 - 1408499
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||||  ||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  1408563 gcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttaccttgtttt 1408499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 14732821 - 14732915
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| || ||||| || |||| |||||||  ||||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||||||    
T  14732821 aaaggacaatccggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgtattg-acgcagccttaccctgtttt 14732915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 38262187 - 38262270
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgta 209  Q
    ||||||| |||||| ||| || ||||| || |||| ||||||| |||| ||| ||||||||||| || ||||||||||||||||    
T  38262187 atataaaaaaaagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgta 38262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 13805214 - 13805140
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctta-ccctgttttac 230  Q
    |||| ||||||| |||||||   ||||| |||| |||||||||||||||||||| |||||||| |||||||||||    
T  13805214 agctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttacccctgttttac 13805140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 19426889 - 19426982
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| |  ||||  ||||||||||||||  | |||||| || |||||||||||||||||||||||| |||||||| ||||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccctatttt 19426982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 15108433 - 15108490
Alignment:
Q  171 cagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||| || ||| ||||| |||||||||| |||||||||| ||||||    
T  15108433 cagggtttgggaagggatcccactatttgatgtattgtacacagccttaccttgtttt 15108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 21139760 - 21139841
Alignment:
Q  147 agtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || ||||||||||||  ||| ||| ||||||||||| |||||||||||||| ||||  || |||||| |||||||    
T  21139760 agtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgtatccaaccttactctgtttt 21139841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 3469176 - 3469270
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||| ||| || |||| |||||||  |||||| | |||||||||| | ||||||  ||||||||||||||| || |||||||||||    
T  3469176 aagggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgcaaccgtaccctgtttt 3469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 43557587 - 43557514
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||| ||  |||| |||||| |||||||  ||||||||||||||||||||||| |||||||    
T  43557587 agctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactctgtttt 43557514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 12473378 - 12473346
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||||| ||||||||||||||    
T  12473378 tttggtgtattgtacgcatccttaccctgtttt 12473346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 16341352 - 16341320
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||| ||||||||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgtttt 16341320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 22699031 - 22699063
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||||||||| |||||||||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgtttt 22699063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 33500623 - 33500556
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcacca--tttggtgtattgtacgcagccttaccctgttt 227  Q
    ||||||| |||||||  ||||||||||| |||||  ||| |||||| |||||||| ||||||||||||    
T  33500623 ccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 48123511 - 48123575
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt 226  Q
    ||||||||||| |||   | |||||||| ||||||||||||||||||| ||||  ||||||||||    
T  48123511 ccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgtt 48123575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 1354755 - 1354869
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacca 232  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 1354854  T
Q  233 aaaagactgtttcca 247  Q
    || || |||||||||    
T  1354855 aagaggctgtttcca 1354869  T

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Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 1347098 - 1347002
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 1347002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 26097294 - 26097181
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |  |||||||||||||||||||||||||||||||||||||  |    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgttttacaca 26097195  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  26097194 agaggctgtttcca 26097181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 25557859 - 25557746
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||  |  |||||||||||||||||||||||||||||||||||||  |    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgttttacaca 25557760  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  25557759 agaggctgtttcca 25557746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 28007747 - 28007666
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| || |||||||||||||||||||||||| ||||||||||||    
T  28007747 gtgcactagagcttccgcatatggagg-ttagggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgttttac 28007666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 29355854 - 29355949
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgttt 227  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 29355949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 32579538 - 32579474
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    |||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  32579538 agctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttacc 32579474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 12221937 - 12222010
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  12221937 agctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 12222010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 9161268 - 9161164
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccct 223  Q
    ||||||| |||||| |||||  ||||| || |||||||||||| |||||||  | ||||||||| ||||||  ||| |||||||||||||||||||| ||    
T  9161268 atataaaaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactct 9161169  T
Q  224 gtttt 228  Q
    |||||    
T  9161168 gtttt 9161164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 3815084 - 3815156
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcag 214  Q
    ||||| ||||| || |||||||||||| | |||||| ||||| ||||| ||||||||||||||||||||||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcag 3815156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 1941941 - 1941897
Alignment:
Q  184 ggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  1941941 ggggtcccaccattcggtgtattgtacgcagccttaccctgtttt 1941897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 18277187 - 18277282
Alignment:
Q  129 taaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||| ||||||||||||| ||||| || |||| ||||||| | || || | |||||||||| |||||||||||||  ||||| || ||||||||||    
T  18277187 taaaaaaaaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctg 18277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 13905015 - 13905072
Alignment:
Q  170 gcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| ||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  13905015 gcagggttcgggaaagggtc-caccatttggtgaattgtatgcagccttaccctgtttt 13905072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 24097690 - 24097623
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| |||||||  ||||||||||| ||||||||||    ||||| ||||||||||||||||||    
T  24097690 agcttccgcatacgcagggtccgggaaggggtcccaccatttgg----ttgtaagcagccttaccctgtttt 24097623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 23930124 - 23930205
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgca 213  Q
    |||||||| |||| | ||||| || |||| ||||||| |||||||  | ||||||||| |||||| ||||||||||||||||    
T  23930124 ataaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 2755450 - 2755517
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||||||||  || ||||||||  ||||||||||||||||||||| ||| ||||    
T  2755450 cgcatatgcaggatttgggaaggactcccaccatttttggtgtattgtacgcagccttagcctatttt 2755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 12886050 - 12885967
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca--tttggtgtattgtacgcag 214  Q
    ||||||| |||||| ||||| || |||| || |||| ||||||| |||||||||||| |||||  ||| |||||||||||||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 15866045 - 15866130
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| || || | ||||| | |||||||  ||||||||||| |||||||||||||||  |||||||| ||||||||||||    
T  15866045 caactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttt 15866130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 383782 - 383837
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgc 212  Q
    |||| ||||||| ||||||| || ||||||||| ||| ||||||||||||||||||    
T  383782 agctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 33138918 - 33138875
Alignment:
Q  185 gggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||    
T  33138918 gggtcccaccatttggtgtattgtacgcggccttactctgtttt 33138875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 2166409 - 2166502
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgt 225  Q
    |||||| |||||| ||||| || |||| ||| ||||  |||||  ||||||||||| |||||||  |||||||||||||||| ||||| |||||    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgt 2166502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 2178042 - 2178135
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgt 225  Q
    |||||| |||||| ||||| || |||| ||| ||||  |||||  ||||||||||| |||||||  |||||||||||||||| ||||| |||||    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgt 2178135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 7947415 - 7947461
Alignment:
Q  179 gggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctg 224  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||    
T  7947415 gggaagggggcccaccattttggtgtattgtacgcagccttaccctg 7947461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 12892145 - 12892064
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgca 213  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||  ||||||||||| ||||||  |||||||||| ||||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 14341117 - 14341163
Alignment:
Q  182 aaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||| || | ||||||||||||||||||||||||||||||    
T  14341117 aaggagtctcagcaatcggtgtattgtacgcagccttaccctgtttt 14341163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 23240870 - 23240936
Alignment:
Q  181 gaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    ||||||||| ||||| ||||| |||||||||||  |||||||||||||||  || || |||||||||    
T  23240870 gaaggggtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagaggctgtttcca 23240936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 24751101 - 24751167
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttg-gtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||| |||| | ||||||||||||||||||  ||||||||||||||| |||||||| ||||    
T  24751101 cgcatacgcacggttcgtgaaggggtctcaccattttagtgtattgtacgcagtcttaccctatttt 24751167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 13267861 - 13267788
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattg 207  Q
    |||||| |||||| ||||| |  |||| ||||||| |||||||   |||||||||| |||||||||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 15865902 - 15865948
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||||||||||  |||||||| ||||||||||||    
T  15865902 ggaaggggtcccaccatttggtgtat--tacgcagctttaccctgtttt 15865948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 32703559 - 32703445
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacca 232  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 32703460  T
Q  233 aaaagactgtttcca 247  Q
    || || |||||||||    
T  32703459 aagaggctgtttcca 32703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 34154814 - 34154908
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttta 229  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgattta 34154908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 8170011 - 8170096
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  8170011 ccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaaaggctgtttcca 8170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 7368525 - 7368419
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagact 240  Q
    |||||| ||||| ||||||| || ||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||||||  || || ||    
T  7368525 caacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagaggct 7368426  T
Q  241 gtttcca 247  Q
    |||||||    
T  7368425 gtttcca 7368419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 7097773 - 7097853
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7097773 gtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttt 7097853  T

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Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 41014455 - 41014360
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| ||||| || |||| |||||||||| ||||   |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 41014360  T

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Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 35710447 - 35710334
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| ||||||||||| | |  ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||  |    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttacaca 35710348  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  35710347 agaggctgtttcca 35710334  T

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Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 24449026 - 24448932
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| | ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctatttt 24448932  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 27328875 - 27328794
Alignment:
Q  149 tgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||| ||||||| |||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 27328794  T

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Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 38879720 - 38879623
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 38879623  T

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Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 4619100 - 4619199
Alignment:
Q  131 aataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||| ||||| || ||||  ||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  4619100 aataaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 4619199  T

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Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 43574719 - 43574648
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  43574719 agctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgtttt 43574648  T

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Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 16880654 - 16880740
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || |||| ||||||| ||| |||  |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  16880654 aacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgtttt 16880740  T

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Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 19142934 - 19143036
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    ||||||| |||||| ||  |||||||| || | || ||||||| ||| |||  ||||||||||| |||||||||||||| ||||||||||||||||||||    
T  19142934 atataaaaaaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgt 19143033  T
Q  226 ttt 228  Q
    |||    
T  19143034 ttt 19143036  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 13801767 - 13801862
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || ||||  ||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 13801862  T

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Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 2838886 - 2838820
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||  | |||||| || ||||||||||||||||||||||||||||||||||||||    
T  2838886 ccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttt 2838820  T

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Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 16957451 - 16957374
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtac 210  Q
    ||||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 43334340 - 43334245
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||  |||||||  ||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcatc-gcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 43334245  T

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Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 1405303 - 1405244
Alignment:
Q  154 tagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgca 213  Q
    ||||||| ||||||||||||||||  |||| ||||| |||||||||||||||||||||||    
T  1405303 tagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgca 1405244  T

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Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 41426040 - 41425990
Alignment:
Q  178 tgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  41426040 tgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttt 41425990  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 219
Target Start/End: Complemental strand, 1565566 - 1565483
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctta 219  Q
    ||||| |||||| ||||| || |||| || ||||||||||||  ||||||||||| | |||||||||| ||||||||||||||||    
T  1565566 aaagggcaacccggtgcacta-agctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagcctta 1565483  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 9794391 - 9794471
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||||| |||||||| |||| || |||||| || ||| ||||||||||||||| |||| |||||||||||||    
T  9794391 gtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

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Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 22600567 - 22600499
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    |||| ||||||| ||||| |  |||||||| || |||||||||||||||||||| ||||||||||||||    
T  22600567 agctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgt 22600499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 22861682 - 22861742
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgt 208  Q
    ||||| ||||||| |||||||||||||||| | ||||||||| ||||||||| ||||||||    
T  22861682 gtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgt 22861742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 29334533 - 29334437
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt-tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| || ||| |||||||| || | || |||| |||||||  ||||| ||||| ||||||| |||||||||||||||||||||||| ||||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgtttt 29334437  T

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Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 12006341 - 12006423
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| ||||||| |||||||||||| ||||||  ||||||||||||| | ||||||||||| ||||    
T  12006341 gtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctatttt 12006423  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 20135712 - 20135646
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||| ||||||    
T  20135712 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttt 20135646  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 3771430 - 3771381
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| ||||| |||||||||||| | |||||||||||||||||    
T  3771430 gggaaggggtcccaccaattggtgtattgttcacagccttaccctgtttt 3771381  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 11657733 - 11657785
Alignment:
Q  169 tgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttac 220  Q
    ||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  11657733 tgcagggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 16028623 - 16028683
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacc 194  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24323727 - 24323795
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    |||| |||||||| |||||| |||||||||||| ||| |||||| ||||| ||||||  ||||||||||    
T  24323727 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 24323795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 24360351 - 24360419
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    |||| |||||||| |||||| |||||||||||| ||| |||||| ||||| ||||||  ||||||||||    
T  24360351 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgt 24360419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 30006416 - 30006369
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt 226  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||||    
T  30006416 gggaaggggtcccaccatttagtgtaatgtacacagccttaccctgtt 30006369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 42924830 - 42924927
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggttt--gggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| || ||||| || |||||||||||| ||||||| |  |||||||| |  || |||||  ||||||||||||||| ||||||||||||||    
T  42924830 aaaggacaatccggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaaccttaccctgtttt 42924927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 208972 - 209021
Alignment:
Q  180 ggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||| ||||||||| | ||||||||||||||||||    
T  208972 ggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttt 209021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 12477164 - 12477205
Alignment:
Q  179 gggaaggggtctcaccattt-ggtgtattgtacgcagcctta 219  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  12477164 gggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 22907913 - 22907958
Alignment:
Q  183 aggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| ||||||||||||||||||| ||| |||||| |||||||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttt 22907958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 1850761 - 1850681
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||||||||||  |||||||   ||||| |||| ||||||||| ||||||||||||| |||||  |||||||    
T  1850761 gtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgcacccttattctgtttt 1850681  T

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Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 30639515 - 30639421
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||||||| || |||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 30639421  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 20225117 - 20225022
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 20225022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 29207904 - 29207993
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29207904 caacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 29207993  T

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Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 47528529 - 47528642
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| || ||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||  |    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 47528628  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  47528629 agaggctgtttcca 47528642  T

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Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 48598824 - 48598937
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| | ||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||  |    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacaca 48598923  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  48598924 agaggctgtttcca 48598937  T

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Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 9832312 - 9832408
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||||| ||||| ||||| | | |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 9832408  T

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Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 244
Target Start/End: Original strand, 11054141 - 11054257
Alignment:
Q  128 ataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    ||||| |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||  | |||||||||||||||||||||| ||||||||||||    
T  11054141 ataaaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttt 11054240  T
Q  228 taccaaaaagactgttt 244  Q
    |||  || |||||||||    
T  11054241 tacacaagagactgttt 11054257  T

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Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 5648394 - 5648300
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||||||| |  |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 5648300  T

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Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 47444093 - 47443999
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||||||| |  |||| | |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 47443999  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 17043423 - 17043484
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  17043423 gcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 17043484  T

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Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 49796910 - 49796838
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttta 229  Q
    |||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  49796910 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgtttta 49796838  T

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Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 10277784 - 10277851
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttta 229  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  10277784 ccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctatttta 10277851  T

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Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 20639657 - 20639752
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttt 20639752  T

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Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 7909308 - 7909374
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  7909308 ccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 7909374  T

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Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 25629185 - 25629091
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||||| |||||  ||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctatttt 25629091  T

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Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 39077802 - 39077908
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagact 240  Q
    |||||| ||||| ||||||| |||||||||||||||  || |||  ||||||||||||||| ||||||||||| ||||||||||||||||  || || ||    
T  39077802 caacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgttttacacaagaggct 39077901  T
Q  241 gtttcca 247  Q
    |||||||    
T  39077902 gtttcca 39077908  T

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Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 23501925 - 23501829
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||||||||  ||||||||||| ||||||  ||||||||||||||||| ||||||||||||||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttt 23501829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 6430627 - 6430719
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||| ||||  || |||| ||||||| |||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttt 6430719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 35567306 - 35567212
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || ||| ||||| || |||| ||||| | |||||||| ||||||||||| ||||||||||||| |||||| |||||||||||||||||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgtttt 35567212  T

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Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 8473621 - 8473713
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggttt--gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt 226  Q
    |||| |||||| ||||| || |||| |||||||||||||| |   ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgtt 8473713  T

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Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 13256398 - 13256494
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||| |||| ||||| ||||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgtttt 13256494  T

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Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 20225211 - 20225119
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgt 225  Q
    ||||| |||||| ||||| || |||| |||||||||| ||||  ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

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Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 30690189 - 30690269
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| |||||||  ||||||||||| ||||| ||||||||||||| ||||||||||||||||||    
T  30690189 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttt 30690269  T

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Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 38786745 - 38786673
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtatt 206  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 51865051 - 51865131
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| |||||||  ||||||||| | ||||||||||||||||||||||||||||||| ||||||    
T  51865051 gtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgtttt 51865131  T

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Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 54175201 - 54175105
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttggg-aaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || ||| ||||| || |||| |||||||||||||||  ||| |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttt 54175105  T

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Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 9987847 - 9987922
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccct 223  Q
    |||||||| |||| ||||||||||| |||   |||||||||| ||||||||||||||||||| |||||||||||||    
T  9987847 gtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccct 9987922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 40915941 - 40915870
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  |||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  40915941 agctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttt 40915870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 20908649 - 20908723
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttacc 221  Q
    ||||| || |||| ||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 21647095 - 21647006
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||| || |||| |||||||||| |||| |||||||||||| ||||||  ||||| ||||||||||||||||||||| ||||    
T  21647095 caacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctatttt 21647006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 5306659 - 5306753
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccg----catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||||| |||||| |||||||| |||| |||    |||| |||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  5306659 aaaagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg 5306753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 16408600 - 16408696
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||  ||||||||||  |||||||  ||||||||||||||||| |||||||||||||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgtttt 16408696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 19027970 - 19027890
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| || |||| |||| || ||| |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19027970 gtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgtttt 19027890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 21489217 - 21489129
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||  | |||| ||||||| |||||||| ||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||    
T  21489217 caacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgtttt 21489129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 25463235 - 25463164
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||||||||||  ||||||||||| ||||||||||||| ||||||||| |||| ||| |||||    
T  25463235 agctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagtttt 25463164  T

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Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 47441574 - 47441642
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctg--ttttaccaaaaagactgtttc 245  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||  |||||| ||| ||||||||||    
T  47441574 gggaaggggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttc 47441642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 20405224 - 20405129
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||| |||| || |||| |||||||||| ||||  ||||||||||| ||||||  || ||||||||||||||  |||||||||||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttt 20405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 30581495 - 30581559
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||| || ||||||||||||||    
T  30581495 catatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttt 30581559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 44363130 - 44363225
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca--tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||  |||||||  |||||||||||| |||||||||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgtttt 44363225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 14983947 - 14983876
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  ||||||||||| |||||||| |||||||||| ||| ||||||||| ||||    
T  14983947 agctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctatttt 14983876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 16494332 - 16494258
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttta 229  Q
    ||||||||||||  |||||| |||||| ||||| ||||||||  ||||||||||| ||||| |||||||||||||    
T  16494332 agcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttta 16494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 16911702 - 16911608
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctg 224  Q
    |||||||| |||||| ||  | || |||| |||| || |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||    
T  16911702 ataaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 16911608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 54967133 - 54967063
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||||| |||||  ||||||||||| ||||||||||| ||||||| ||| ||||||||||||||    
T  54967133 agctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgtttt 54967063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 41018824 - 41018882
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccct 223  Q
    |||| ||| ||| |||||||||||| ||| ||||||||||||||||| |||||||||||    
T  41018824 catacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccct 41018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 49938615 - 49938669
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtac 210  Q
    |||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  49938615 agctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtac 49938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 28494295 - 28494222
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttg 199  Q
    ||||||| |||| | || ||| ||||| ||||||| ||||||||||||| | |||||||||||| |||||||||    
T  28494295 atataaaaaaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatttg 28494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 48327770 - 48327858
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || | ||||||||||||  ||||| |||||| |||| |||||||  |||||||||||| |||| |||||||||||||    
T  48327770 aacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctgtttt 48327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 12711474 - 12711542
Alignment:
Q  160 ttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| ||  ||| || ||||||||| | |||||||||||||||||||||| |||||||| ||||    
T  12711474 ttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttt 12711542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 25343261 - 25343229
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||||||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgtttt 25343229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 39029082 - 39029154
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttg-gtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||||||||||  || ||| |||| ||||||||  ||||||||||| |||||||||||||||||    
T  39029082 agctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgtttt 39029154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 14590922 - 14590880
Alignment:
Q  186 ggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttt 14590880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 196
Target Start/End: Complemental strand, 32484369 - 32484307
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat 196  Q
    |||||| |||||| ||||| || |||| |||||||||||||||  ||||||||||| ||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 37494939 - 37494893
Alignment:
Q  182 aaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| ||||||||||| ||||||| ||| ||||||||||||||    
T  37494939 aaggggtcccaccatttggtatattgtatgcaaccttaccctgtttt 37494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 17079696 - 17079745
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttta 229  Q
    |||| ||||| |||||||| | |||||||| |||||||||||||||||||    
T  17079696 ggaaagggtcccaccatttagcgtattgtatgcagccttaccctgtttta 17079745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 30352579 - 30352667
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttac 220  Q
    |||||| |||| | ||||| || |||| ||||||| |||||||  | ||||||||| ||||||||  ||||||||||||||||| ||||    
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttac 30352667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 3580870 - 3580926
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    ||||||||||||  |||||||||||  | |||||||||||||| || ||||||||||    
T  3580870 catatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttacc 3580926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 55766522 - 55766558
Alignment:
Q  191 caccatttggtgtattgtacgcagccttaccctgttt 227  Q
    |||||||  ||||||||||||||||||||||||||||    
T  55766522 caccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 45812526 - 45812646
Alignment:
Q  124 tcatataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccct 223  Q
    ||||| ||| |||| | |||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45812526 tcataaaaaaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccct 45812625  T
Q  224 gttttaccaaaaagactgttt 244  Q
     ||||||  || |||||||||    
T  45812626 cttttacacaagagactgttt 45812646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 34725095 - 34725210
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacc 231  Q
    |||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  34725095 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttaca 34725194  T
Q  232 aaaaagactgtttcca 247  Q
     || || |||||||||    
T  34725195 caagaggctgtttcca 34725210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 19414597 - 19414500
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttac 19414500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 35253186 - 35253282
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| ||| || ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35253186 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 35253282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 32632579 - 32632650
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32632579 agctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 32632650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 47214654 - 47214555
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||   || ||||||||||||    
T  47214654 gtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaacaagagactgtttcca 47214555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 12126836 - 12126932
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||| ||||||| || |||| |||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttac 12126932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 38478281 - 38478377
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  | ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgttttac 38478377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 4349796 - 4349703
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 41319804 - 41319899
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||||||| |  | || ||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  41319804 taaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttt 41319899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 20004086 - 20004185
Alignment:
Q  131 aataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||| ||||| || |||| |||||||||| |||| |||||||||||| ||||||  ||||||||||||||||||||||||| ||||||    
T  20004086 aataaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgtttt 20004185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 23768342 - 23768413
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  23768342 agctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgtttt 23768413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 23796624 - 23796538
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttac 220  Q
    |||||| || ||| ||||| || |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttac 23796538  T

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Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 31382213 - 31382307
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| || || || |||| |||||||||||||||   |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttt 31382307  T

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Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 46247952 - 46248046
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| || || || |||| ||||||| |||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttt 46248046  T

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Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 30395721 - 30395821
Alignment:
Q  130 aaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgttt 227  Q
    |||||||||| |||| | ||||| || |||| |||||||||| ||||  ||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  30395721 aaataaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 30395820  T
Q  228 t 228  Q
    |    
T  30395821 t 30395821  T

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Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 43768298 - 43768205
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    |||||| || ||| |||||||| |||| ||| ||| ||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  43768298 aaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 10378748 - 10378828
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| |||||||||||||||    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10378748 gtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 15505700 - 15505632
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    |||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  15505700 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

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Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 45402263 - 45402175
Alignment:
Q  126 atataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcag 214  Q
    ||||||| ||| || |||||| ||||| || |||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  45402263 atataaaaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcag 45402175  T

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Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 14617198 - 14617105
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtt 226  Q
    |||||||  ||||| ||||| || |||| |||||||||||||||  |||||||| || ||||||||||||||||||||||| ||||||| ||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgtt 14617105  T

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Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 18741964 - 18742052
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || ||||  |||||| ||||||| |||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 18742052  T

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Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 1517304 - 1517404
Alignment:
Q  128 ataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    ||||| |||||| |||||| ||||| || |||| | ||||| ||||||| || ||||||||| ||||| ||||||||||||||||||||||| | |||||    
T  1517304 ataaaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttt 1517403  T
Q  228 t 228  Q
    |    
T  1517404 t 1517404  T

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Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 18944811 - 18944708
Alignment:
Q  128 ataaataaaaggacaacccagtgcattaga-gcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctg 224  Q
    ||||| |||||| |||||| ||||| || | ||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||    
T  18944811 ataaaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctg 18944712  T
Q  225 tttt 228  Q
    ||||    
T  18944711 tttt 18944708  T

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Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 27201808 - 27201713
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgttt 227  Q
    |||||| ||||||| |||| || |||| ||||||| ||| |||  ||||||||||| ||||||||  |||||||||||||||||||||||||||||    
T  27201808 aaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttt 27201713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 11596648 - 11596577
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||   |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  11596648 agctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttt 11596577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 46991956 - 46991869
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||| || |||| || |||| |||||||  ||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  46991956 caacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgtttt 46991869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 50812099 - 50812005
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || |||||||||||| |||| ||||||| ||||||   ||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  50812099 aaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtc-caccattttggtgtattgtacgcaaccttaccctgtttt 50812005  T

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Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 35005285 - 35005188
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| ||||| || |||  ||||||| |||||||  ||||||||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtttt 35005188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 248
Target Start/End: Complemental strand, 27474441 - 27474324
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg-ttttac 230  Q
    |||||||| ||| || ||||| || |||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||| || ||||| ||||||    
T  27474441 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctgtttttac 27474342  T
Q  231 caaaaagactgtttccaa 248  Q
      || |||||||||||||    
T  27474341 acaagagactgtttccaa 27474324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 10668389 - 10668290
Alignment:
Q  131 aataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||| ||||| || |||| ||||||| ||||||   ||||||||||| ||||||  ||||||||||||||||| ||||||| ||||||    
T  10668389 aataaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgtttt 10668290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 21910686 - 21910742
Alignment:
Q  172 agggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  21910686 agggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttt 21910742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 25468284 - 25468352
Alignment:
Q  156 gagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    ||||| ||||||| ||||||| ||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  25468284 gagctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctg 25468352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 18724567 - 18724638
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||||| |||||  ||||||||||| ||  |||||||||||||||| |||||||||||||||||    
T  18724567 agctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgtttt 18724638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 19932782 - 19932848
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||||  ||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  19932782 gcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 19932848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 39214971 - 39215052
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || ||||||| |||| |||||||||||||||||| | ||||| |||||  |||||||||||||||||||| |||||    
T  39214971 gtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagtttt 39215052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 45264412 - 45264493
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||||||||||| || ||||||||| ||||| |||||||||||| || ||||||||| |||||||    
T  45264412 gtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgtttt 45264493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 6925245 - 6925165
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| ||||||   ||||||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  6925245 gtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctatttt 6925165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 228
Target Start/End: Original strand, 34148989 - 34149053
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||   |||||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  34148989 gcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccctatttt 34149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 6983858 - 6983904
Alignment:
Q  182 aaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||    
T  6983858 aaggggtcccaccatttggtgtattgtacgcatacttaccctgtttt 6983904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 31442433 - 31442483
Alignment:
Q  179 gggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||||||||    
T  31442433 gggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttt 31442483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 44485153 - 44485195
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  44485153 gggaaggggtccaaccatttggtgtattgtacgcagccttacc 44485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 4430082 - 4430119
Alignment:
Q  191 caccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4430082 caccatttggtgtattgtacgcagtcttaccctgtttt 4430119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 6358251 - 6358190
Alignment:
Q  164 gcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctg 224  Q
    ||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||| ||||||||    
T  6358251 gcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgcagctttaccctg 6358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 42304206 - 42304302
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttg--gtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||| || ||||| || |||| || |||| |||||||  ||||||||||| ||||||||   |||||||||||||| ||||||||||||||    
T  42304206 aaaagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgtttt 42304302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 4249456 - 4249520
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgc 212  Q
    |||||||| |||| |||||||  || |||| |||||||| || ||||||||||||||||||||||    
T  4249456 gtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 4249780 - 4249844
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgc 212  Q
    |||||||| |||| |||||||  || |||| |||||||| || ||||||||||||||||||||||    
T  4249780 gtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

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Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 4250104 - 4250168
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgc 212  Q
    |||||||| |||| |||||||  || |||| |||||||| || ||||||||||||||||||||||    
T  4250104 gtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

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Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 17470407 - 17470439
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||||||||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgtttt 17470439  T

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Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 28894586 - 28894642
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctta 219  Q
    |||||||||||||| | ||||||||| | |||||||| ||||||||||||| |||||    
T  28894586 cgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgcaacctta 28894642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 50606562 - 50606498
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt 198  Q
    |||||| |||||| ||||| || |||| |||||||||||||||  ||||||||||| ||||||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

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Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 20999848 - 20999943
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| || ||| ||||| || |||| |||| || |||||||   |||||||| | || ||||||||||||||||||||||||| || ||||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcagccttgccttgtttt 20999943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 27136696 - 27136745
Alignment:
Q  180 ggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||| ||||||||||||||| ||||||| ||||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgtttt 27136745  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 21723784 - 21723748
Alignment:
Q  192 accatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  21723784 accatttggtgtattgtactcagccttaccctatttt 21723748  T

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Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 22324989 - 22324957
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||| ||||||||||||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttt 22324957  T

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Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 22930114 - 22930161
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||||||||||||||||| | || ||||||||||||||    
T  22930114 ggaaggggtcccaccatttggtgtattgt-cacaaccttaccctgtttt 22930161  T

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Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 24564445 - 24564409
Alignment:
Q  192 accatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgtttt 24564409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 33594140 - 33594196
Alignment:
Q  144 cccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttgg 200  Q
    ||||||||| || |||| ||||||| ||||||| |||||||||||| ||||| ||||    
T  33594140 cccagtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 35019359 - 35019304
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcctta 219  Q
    |||||| ||||||| ||||| |||||| ||||| ||||||||||||| |||||||||    
T  35019359 cgcatacgcagggtctggga-ggggtcccaccaattggtgtattgtatgcagcctta 35019304  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 46859163 - 46859131
Alignment:
Q  196 tttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||||||||| |||||||||||||    
T  46859163 tttggtgtattgtacgcagtcttaccctgtttt 46859131  T

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Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 12914033 - 12914128
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||| |||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgtttt 12914128  T

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Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 22122918 - 22123029
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaa 235  Q
    |||| |||||| ||||| |||||||  ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||     
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 22123017  T
Q  236 agactgtttcca 247  Q
    ||||||||||||    
T  22123018 agactgtttcca 22123029  T

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Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 1217246 - 1217133
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||||||  |    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacaca 1217147  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  1217146 agaggctgtttcca 1217133  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 15797378 - 15797282
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| |||||| ||||| ||||||| || ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 15797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 31593004 - 31592892
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaa 234  Q
    ||||| |||||| ||||| ||||||| |||||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 31592905  T
Q  235 aagactgtttcca 247  Q
     || |||||||||    
T  31592904 gaggctgtttcca 31592892  T

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Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 34771363 - 34771459
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||| || ||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 34771459  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 40272811 - 40272905
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 40272905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 16735600 - 16735504
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| |||||||||||| |  |||| ||||||| |||| ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16735600 ataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 16735504  T

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Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 39203671 - 39203576
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||| |||||| ||||| || |||| ||||||||||| |||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttac 39203576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 54484849 - 54484755
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 54484755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 26292488 - 26292392
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||||||||||| ||||| ||||| | |||||||||||||||| |||||||| || || |||||||||||| |||||| | |||||||||||||||    
T  26292488 aaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgttttac 26292392  T

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Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 13628787 - 13628884
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgttt 227  Q
    |||||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  13628787 ataaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttt 13628884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 29366718 - 29366815
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||||||| || |||| || |||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 29366815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 6411835 - 6411915
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| ||| ||| |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  6411835 gtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttt 6411915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 22609921 - 22609829
Alignment:
Q  136 aaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||| ||||| |  |||| ||||||| ||| |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 22609829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 353355 - 353444
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||| || |||| |||||||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  353355 caacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 26869864 - 26869770
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| |||||  | |||| ||||||| ||| |||  || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 26869770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 247
Target Start/End: Original strand, 7696899 - 7696999
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagactg 241  Q
    ||||| ||||| ||||||| || ||||||||| ||  |||||||||     ||||||||||||||||||||||||||||||||||||||  || ||||||    
T  7696899 aacccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgttttacacaagagactg 7696993  T
Q  242 tttcca 247  Q
    ||||||    
T  7696994 tttcca 7696999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 13730601 - 13730697
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||||||||| ||||  ||||||||||| ||||||  |||||||||||||| |||||||||||||||||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgtttt 13730697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 47624154 - 47624105
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47624154 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 47624105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 49013472 - 49013568
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| |||| ||||| ||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 49013568  T

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Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 7943141 - 7943054
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| || |||| ||||||| ||| ||| ||| ||||| || ||||||||| |||||||||||||| |||||||||||||    
T  7943141 caacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctgtttt 7943054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 9276393 - 9276328
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  9276393 ccgcatacgcagggtccgggaaagggtc-caccatttggtgtattgtacgcagccttaccctgtttt 9276328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 46421057 - 46421130
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  46421057 agctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 46421130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 52926218 - 52926304
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttac 220  Q
    |||||| |||||| ||||  || |||| ||||||| |||||||  ||||||| ||| ||||||||||||||||||||||||||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 14987109 - 14987021
Alignment:
Q  142 aacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| || |||| ||||||||||| |||  ||||| ||||| |||||||  |||||||||||||||||||||||||||||||    
T  14987109 aacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgtttt 14987021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 26573256 - 26573191
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||  |||| |||||| ||||| ||||||||||||||||||||||||||||||||    
T  26573256 cgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgtttt 26573191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 45786214 - 45786309
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| | ||||  |||||||  ||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 45786309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 54374367 - 54374439
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||||||||||  ||||||||||| ||||| ||||||| |||||||||||||||||||| ||||    
T  54374367 agctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctatttt 54374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 4495714 - 4495757
Alignment:
Q  185 gggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctgtttt 4495757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 228
Target Start/End: Original strand, 8247692 - 8247782
Alignment:
Q  141 caacccagtgca-ttagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||| |||| ||||||| |||||||  ||||||| ||| |||||||  |||||||||||||||| ||||||||||||||    
T  8247692 caacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgtttt 8247782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 8410889 - 8410960
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| |||||||||| || |||| |||| ||||| ||||||||||||  ||||||||||||||||||    
T  8410889 agcttccgcctatgcagggtctgagaagaggtcccaccagttggtgtattgtgagcagccttaccctgtttt 8410960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 9607340 - 9607267
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||||| |||| |||||||||||| || ||||  ||||||||| |||||||||||||||||||||    
T  9607340 agctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgtttt 9607267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 33926212 - 33926146
Alignment:
Q  163 cgcatatgcagggtttgggaaggggtctcaccatt-tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||||||   |||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  33926212 cgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttt 33926146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 45948851 - 45948931
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| |||||||  | ||||||||| ||||| ||||||||||||| ||||||||||||| ||||    
T  45948851 gtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctatttt 45948931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 516570 - 516473
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt---ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| | ||||||   ||| |||||| |||||||||||||||||||    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgtttt 516473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 10795445 - 10795515
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgt 225  Q
    |||| ||||||| |||||||   |||||||||| ||||||||  |||||||||||||||||||||||||||    
T  10795445 agctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgt 10795515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 25517168 - 25517251
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcc 216  Q
    ||||||| |||||| ||||| || |||| | ||||| ||||| |  ||||||||||| |||||||| |||||||||||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagcc 25517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 30452955 - 30452892
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca 195  Q
    |||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |||||    
T  30452955 ataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 53996564 - 53996659
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || ||| ||||| || |||| || |||| |||| ||  ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttt 53996659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 34420687 - 34420737
Alignment:
Q  179 gggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  34420687 gggaaggggtcccaccattttggtgtatggtacgcagccttaccctgtttt 34420737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 45620884 - 45620921
Alignment:
Q  191 caccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45620884 caccaattggtgtattgtacgcagccttaccctgtttt 45620921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 829441 - 829521
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgca 213  Q
    |||||||||  || ||||| || |||| | ||||| |||||||| ||||||||||| ||||| ||||||||||||||||||    
T  829441 aaaaggacagaccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 24577993 - 24577917
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtac 210  Q
    |||||| ||| || ||||| ||||||| ||| ||||||||||| |||||| || || |||||||| |||||||||||    
T  24577993 aaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 24578083 - 24578007
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtac 210  Q
    |||||| |||||| ||||| ||||| | ||||||||| ||||| |||||| | ||| |||||||| |||||||||||    
T  24578083 aaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 31904906 - 31904950
Alignment:
Q  184 ggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||||||||||||||||||||| | |||||||||||    
T  31904906 ggggtcccaccatttggtgtattgtacgcagtcataccctgtttt 31904950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 24851300 - 24851367
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggt 201  Q
    |||||| |||||| ||||| || |||| ||||||||||||| |  ||||||||||| |||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 31831297 - 31831242
Alignment:
Q  192 accatttggtgtattgtacgcagccttaccctgttttaccaaaaagactgtttcca 247  Q
    |||||||||||||||||| ||||||||||||| ||||||  || || |||||||||    
T  31831297 accatttggtgtattgtatgcagccttaccctattttacacaagaggctgtttcca 31831242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 54032609 - 54032652
Alignment:
Q  185 gggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgtttt 54032652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 45139519 - 45139568
Alignment:
Q  178 tgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgt 225  Q
    |||||||||||| ||||||||  ||||||||||| |||||||||||||||    
T  45139519 tgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgt 45139568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 225
Target Start/End: Original strand, 52428537 - 52428567
Alignment:
Q  195 atttggtgtattgtacgcagccttaccctgt 225  Q
    |||||||||||||||||||||||||||||||    
T  52428537 atttggtgtattgtacgcagccttaccctgt 52428567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 21330270 - 21330339
Alignment:
Q  159 cttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||||| ||| | |||| ||||| | | ||||||||||||||| || |||||||||| ||||    
T  21330270 cttccgcatatgcatggtctaggaaagggtcccgcaatttggtgtattgtatgcggccttaccctatttt 21330339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 33235641 - 33235596
Alignment:
Q  183 aggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||| ||||||||||| ||| |||||||||||||    
T  33235641 aggggtcccaccatttagtgtattgtacacagtcttaccctgtttt 33235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 25944597 - 25944533
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||  ||||||||||| |||||||| |||||||||||| ||||||| ||| |||||    
T  25944597 catacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagtttt 25944533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 21779257 - 21779356
Alignment:
Q  131 aataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    ||||||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  21779257 aataaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttac 21779356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 9671316 - 9671202
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttacca 232  Q
    ||||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||      
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacac 9671217  T
Q  233 aaaagactgtttcca 247  Q
    || || |||||||||    
T  9671216 aagaggctgtttcca 9671202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 10546299 - 10546205
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10546205  T

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Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 17623700 - 17623610
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||||| |||||||||||| || ||||||| |||| ||||| || ||||||||||  ||||||||||||||||||||||||||||||||||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctg 17623610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 25249737 - 25249851
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt-tacca 232  Q
    |||||| |||||| ||||| || ||||  |||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| |||      
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacac 25249836  T
Q  233 aaaagactgtttcca 247  Q
    || ||||||||||||    
T  25249837 aagagactgtttcca 25249851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 8455313 - 8455406
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt 225  Q
    |||||||| |||||| ||||| || |||| | ||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  8455313 ataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt 8455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 23397899 - 23397787
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaa 234  Q
    ||||| |||||| ||||| ||||||| ||||||||| |||||  | ||||||||| ||||||||||||||||||||| ||||||||||| ||||||  ||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacacaa 23397800  T
Q  235 aagactgtttcca 247  Q
     || |||||||||    
T  23397799 gaggctgtttcca 23397787  T

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Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 36871627 - 36871534
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| ||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 36871534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 10543835 - 10543740
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 10543740  T

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Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 12023932 - 12024012
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| |||||||  ||| |||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  12023932 gtgcattaaagcttccaaatacgcagggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 12024012  T

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Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 26684619 - 26684706
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    |||||||||| || |||||||| |||| ||||||| |||||||| |||||| |||| |||||||| || |||||||||||||||||||    
T  26684619 aaaaggacaatccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttacc 26684706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 32781310 - 32781381
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||  |||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  32781310 agctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgtttt 32781381  T

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Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 14444864 - 14444770
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||  ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttt 14444770  T

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Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 22371145 - 22371096
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22371145 gggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 22371096  T

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Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 11514573 - 11514486
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttac 220  Q
    |||||||| ||| || ||||| || |||| ||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  11514573 ataaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttac 11514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 14530455 - 14530360
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatt--tggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| |||||||  |||||||||||||| ||||||||||||||||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttt 14530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 21377103 - 21377166
Alignment:
Q  165 catatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  21377103 catacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgtttt 21377166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 30864439 - 30864510
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| |||||||||||||| || ||| |||||||||| ||||||||||| ||||||||| ||||    
T  30864439 agcttccgcatacgcagggtttgggaaaggatcttaccatttggtatattgtacgcacccttaccctatttt 30864510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 44643660 - 44643565
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| || ||| ||||| ||  ||| ||||||| ||||||| |||||||||||| |||||||||||  ||||||||||||||||| |||||||    
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttt 44643565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 17668138 - 17668048
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 224  Q
    |||||| |||||| ||||| || |||| ||  ||| |||||||| | ||||||||  ||||||||||||||||||||||||||||||||||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctg 17668048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 30826171 - 30826078
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |  ||||| || |||| ||||||||| ||||| ||||||||| || ||||||||||||||||||||||| ||||||||| ||||    
T  30826171 aaaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaagggttc-caccatttggtgtattgtacgcaaccttaccctatttt 30826078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 25632644 - 25632551
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| ||||||| | | |||| |||||||  || ||||||||||||||||||||||||||||| ||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgtttt 25632551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 4516373 - 4516444
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||| |||||||  ||||||||||| ||||| ||||||||||||||||||| || |||||||||    
T  4516373 agcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgtttt 4516444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 25641637 - 25641543
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| || || || || ||||  |||||| ||||| || ||||||||||| ||| ||||||||||||||||||| | ||||||||||||    
T  25641637 aaaaggacaatccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgcaactttaccctgtttt 25641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 31523358 - 31523296
Alignment:
Q  143 acccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtat 205  Q
    |||||||||| || |||| |||||||||||||||||||||| ||||  |||||||||||||||    
T  31523358 acccagtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 24890534 - 24890453
Alignment:
Q  147 agtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || |||| | ||||| |||||||  ||||||||||| ||||| ||||||||||||| ||||||||||| ||||||    
T  24890534 agtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttt 24890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 25079717 - 25079810
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || ||||   ||||| |||||||  ||||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttt 25079810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 27573756 - 27573663
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    |||||| ||||||  |||| || |||| || ||||  |||||||||||||  |||  ||||||||||||||||||||||||||||||| |||||    
T  27573756 aaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatgttt 27573663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 40762234 - 40762327
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||| ||||| || |||| || |||| |||||||   |||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagtttt 40762327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 99274 - 99358
Alignment:
Q  144 cccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| || || |||| |||||||  |||||| || ||||||||  |||||||||||||||||||||||||||| || ||||||    
T  99274 cccagtacactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttt 99358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 5450376 - 5450328
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  5450376 ggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttt 5450328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 17896349 - 17896302
Alignment:
Q  181 gaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  17896349 gaaggggtcccaccatttggtatattgtacgcagccttaccctatttt 17896302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 39914304 - 39914398
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| ||||||  |||| || |||| ||||||| |||||||  || |||||||| ||||||| |||||||||||| || ||||||||||||||    
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttt 39914398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 5841167 - 5841070
Alignment:
Q  133 taaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccat--ttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||| | ||||| || |||| |||||||||| ||||  ||||||||||| ||||||  ||| ||||||||||||| ||||||||| ||||    
T  5841167 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctatttt 5841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 23145742 - 23145791
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| ||||| |||||||||||||||||||||||| |||||||    
T  23145742 gggaaagggtcccaccaattggtgtattgtacgcagccttacactgtttt 23145791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 23557532 - 23557581
Alignment:
Q  179 gggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||| ||||| |||||||||||||||||||||||| |||||||    
T  23557532 gggaaagggtcccaccaattggtgtattgtacgcagccttacactgtttt 23557581  T

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Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 24200622 - 24200718
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || ||||  | ||||  ||||||  |||||||| || ||||||||  ||||||||||||||||||||||||||||||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttt 24200718  T

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Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 12315697 - 12315745
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| ||||||| |||||||||||||||| ||| |||||||||||||    
T  12315697 ggaaggagtctcactatttggtgtattgtacacagtcttaccctgtttt 12315745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 13245117 - 13245181
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    |||| ||| ||||||| |||  ||||||||||| |||||||| ||||| ||||||||||||||||    
T  13245117 agctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 19977727 - 19977807
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| |||||||  || |||| |||||||| || ||||||||||||||||||||||| ||||| ||| ||||    
T  19977727 gtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctatttt 19977807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 31821356 - 31821436
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||| |||| |||||||  |||| || || |||||||| || ||||||||||||||||| || ||||||||| ||||    
T  31821356 gtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccctatttt 31821436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 33795398 - 33795327
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtatt-gtacgcagccttaccctgtttt 228  Q
    |||| |||||||  |||||| |||||||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  33795398 agctcccgcatacacagggtctgggaaggggtcccaccata-ggtgtatttgtacgcagccttaccctgtttt 33795327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 17471658 - 17471591
Alignment:
Q  162 ccgcatatgcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||| |||||||  |||||||||||||| ||||| ||| |||||||||||| |||| ||||||||    
T  17471658 ccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttt 17471591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 44449418 - 44449477
Alignment:
Q  170 gcagggtttgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||  ||||||||||| ||| |||| ||||||||||||||||||||| ||||||||    
T  44449418 gcagggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttt 44449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 31158461 - 31158534
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcacca--tttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| ||||||| |||||||||||| |||||  |||||| ||||||| |||  |||||||||||||    
T  31158461 agctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgtttt 31158534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 2003592 - 2003629
Alignment:
Q  191 caccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttt 2003629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 7214625 - 7214554
Alignment:
Q  181 gaaggggtctcaccatttg--gtgtattgtacgcagccttaccctg--ttttaccaaaaagactgtttccaa 248  Q
    |||||| |||||||||||   |||||||||||||||||||||||||  ||||||  || |||||||||||||    
T  7214625 gaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaa 7214554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 24860001 - 24860070
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagcct 217  Q
    ||||| || |||| ||||||| |||||||  | ||||||||   ||||||||||||||||||||||||||    
T  24860001 gtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcagcct 24860070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 39499243 - 39499323
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| || |||| ||||||| ||||| || |  ||||| || ||||||||| ||||||||||||||| ||||||| ||||    
T  39499243 gtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccctatttt 39499323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 44521390 - 44521466
Alignment:
Q  152 attagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| |||| ||| |||||||  || ||||||||| || | |||||||||||||| || ||||||||||| ||||||    
T  44521390 attaaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgtttt 44521466  T

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Target: scaffold0168 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 30713 - 30600
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaa 233  Q
    |||||| |||||| ||||| ||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||||  |    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacaca 30614  T
Q  234 aaagactgtttcca 247  Q
    | || |||||||||    
T  30613 agaggctgtttcca 30600  T

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Target: scaffold0180 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 24132 - 24220
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccc 222  Q
    |||||| ||| || ||||| ||||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  24132 aaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 3e-23; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 230
Target Start/End: Complemental strand, 43796 - 43697
Alignment:
Q  132 ataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaa-ggggtctcaccatttggtgtattgtacgcagccttaccctgttttac 230  Q
    |||||||| |||| ||||||| ||||||| |||||||||||||||  | ||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  43796 ataaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttac 43697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 24794 - 24865
Alignment:
Q  157 agcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  24794 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtttt 24865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 46967 - 46873
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctatttt 46873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 46721 - 46796
Alignment:
Q  149 tgcattagagcttccgcatatgcagggtttgggaaggggtctcacca-tttggtgtattgtacgcagccttaccct 223  Q
    ||||||| |||| ||||||| ||||||| |||||||||||| ||||| |||||| ||||||| ||| |||||||||    
T  46721 tgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 141 - 228
Target Start/End: Complemental strand, 10939 - 10852
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| || |||| ||||||| |||||||  ||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  10939 caacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgtttt 10852  T

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Target: scaffold0258 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 13023 - 13117
Alignment:
Q  134 aaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||| |||||| ||||| || |||  ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttgtttt 13117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 11264 - 11152
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaa 234  Q
    ||||| |||||  ||||| ||||||| |||||||||||||||  ||||||| ||| ||||||||||||||||||| ||||||||||  ||||||||  ||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaa 11165  T
Q  235 aagactgtttcca 247  Q
     || |||||||||    
T  11164 gaggctgtttcca 11152  T

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Target: scaffold0187 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 10056 - 10162
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagact 240  Q
    |||||| ||||| | ||||| | |||||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||| |||||||||  || || ||    
T  10056 caacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggct 10155  T
Q  241 gtttcca 247  Q
    |||||||    
T  10156 gtttcca 10162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 20384 - 20490
Alignment:
Q  141 caacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttttaccaaaaagact 240  Q
    |||||| ||||| | ||||| | |||||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||| |||||||||  || || ||    
T  20384 caacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagaggct 20483  T
Q  241 gtttcca 247  Q
    |||||||    
T  20484 gtttcca 20490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 1581 - 1682
Alignment:
Q  128 ataaataaaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgttt 227  Q
    |||||||||||| |||||  ||||| || |||| ||||||| || ||||  ||||||||||| || |||||||||||||||| ||||||||| |||||||    
T  1581 ataaataaaagg-caacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttt 1679  T
Q  228 tac 230  Q
    |||    
T  1680 tac 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 228
Target Start/End: Complemental strand, 59114 - 59019
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccattt--ggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| ||||||  |||| || |||| ||||||| |||| || |||||||||||| ||||||||  |||||||||||||||| |||||||||||||    
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgtttt 59019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 35062 - 35110
Alignment:
Q  180 ggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctgtttt 35110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 3666 - 3593
Alignment:
Q  148 gtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttacc 221  Q
    ||||| || |||| ||||||| |||||||| ||||||||||| || |||| |||||||| ||||||||||||||    
T  3666 gtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttacc 3593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 72867 - 72960
Alignment:
Q  135 aaaggacaacccagtgcattagagcttccgcatatgcagggtttgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    ||||| |||||  ||||| || |||| ||||||| ||||| |  ||||||||||   |||||||||||||||||| ||||||||||| ||||||    
T  72867 aaagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgtttt 72960  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 23691 - 23641
Alignment:
Q  178 tgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||||||||||| ||||||||| |  |||||||||||||| ||||||||||    
T  23691 tgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgtttt 23641  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 226456 - 226498
Alignment:
Q  186 ggtctcaccatttggtgtattgtacgcagccttaccctgtttt 228  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttt 226498  T

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