View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10319_low_34 (Length: 284)
Name: NF10319_low_34
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10319_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 26696275 - 26696530
Alignment:
| Q |
14 |
agatcggttgttcttttttaaaggtgggaatatactttggtttctaatatatgcctaaagcagtgactatatttaaaaaataaataaactagaaaacaat |
113 |
Q |
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| T |
26696275 |
agatcggttgttcttttttaaagttgggaatatactttagtttctaatatatgcctaaagcagtgactatatttaaaaaataaataaactagaaaacaat |
26696374 |
T |
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| Q |
114 |
ccaacagcacaagnnnnnnngactgtttacaacaattgttaccaccgcaatttggcacctgtgatggttcacacaattcnnnnnnnagaggtcacacaat |
213 |
Q |
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| T |
26696375 |
ccaacagcacaagaaaaaaagactgtttacaacaattgttaccaccgcaatttggcacctgtgatggttcacacaattctttttttagaggtcacacaat |
26696474 |
T |
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| Q |
214 |
cacagtatgtagaggagtcaaaactcaaaagtagaattaagtctttatatgaaatt |
269 |
Q |
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| T |
26696475 |
cacagtatgtagaggagtcaaaactcaaaagtagaattaagtctttatatgaaatt |
26696530 |
T |
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