View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10319_low_40 (Length: 249)
Name: NF10319_low_40
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10319_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 941550 - 941318
Alignment:
| Q |
1 |
aaatatatgcattatctattttttgatattagagtatnnnnnnnnntatggaattaatgaaatacagtcaataacaagaaagtacaaattaacttacagc |
100 |
Q |
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| T |
941550 |
aaatatatgcattatctattttttgatattagagtataaaaaaaaaaatggaattaatgaaatacagtcaataacaagaaagtacaaattaacttacagc |
941451 |
T |
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| Q |
101 |
ataatcaagctcttcaaagttatagtttttgccagactgctataaagaagagctggagtgaacacaaaatatacgatctgtacaataaaaatatgcattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
941450 |
ataatcaagctcttcaaagttatagtttttgccagactgctataaagaagagctggagtgaacacaaaatatacgatctgtacaataaaaatatgcattc |
941351 |
T |
|
| Q |
201 |
ataataatcaattattttgttgccaagtgatgt |
233 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
941350 |
ataataatcaattattttgttgccaagtaatgt |
941318 |
T |
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