View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10319_low_61 (Length: 209)
Name: NF10319_low_61
Description: NF10319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10319_low_61 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 31025131 - 31025316
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
31025131 |
agagatggtgatggtggagtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggtactgatacgttgttttggtttcactggtgat |
31025230 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatgatgtcc |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
31025231 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagttgtagacaaatatattactgtggctaacatgttgtcc |
31025316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 13553812 - 13553991
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||| |
|
|
| T |
13553812 |
agagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttttcatacgttgttttggtttcactggtggt |
13553911 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
13553912 |
gtggaggggcgccccttagagagcagtttcccaggttgttcgatttagctgtagacaaatatactactgtagctaacatg |
13553991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 39 - 191
Target Start/End: Original strand, 47105265 - 47105417
Alignment:
| Q |
39 |
agttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttagagagcagt |
138 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47105265 |
agttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgttgttttggttccactggtggtgtggaggggcgccccttagagagcagt |
47105364 |
T |
|
| Q |
139 |
ttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
47105365 |
ttcccaggttgtttgatttagctgtagacaaatatactactgtagctaacatg |
47105417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 19728998 - 19728820
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtg |
112 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||| ||||||||| |||||||||||| |
|
|
| T |
19728998 |
gagatggggatggtggtgtagggggtagttggtttggtgatagtgtgcgtaagaaggtgggtgatgggactgatacgttgttttggcatcactggtggtg |
19728899 |
T |
|
| Q |
113 |
tggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||| || ||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||| |||| ||||||||| |
|
|
| T |
19728898 |
tggcggagcgcctcttagagagttgtttccgaggttgtttggtttagctgtgaacaaagttatttctgtagctaacatg |
19728820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 17856230 - 17856098
Alignment:
| Q |
30 |
gtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctctta |
129 |
Q |
| |
|
||||||||| |||| || || |||||||||| ||| |||||| | |||||| ||||||| |||||||||| ||| |||||| ||| | | ||| ||| |
|
|
| T |
17856230 |
gtagggggtggttggttcggcgatagtgtgcttagaaaggtgggggatggtgctgatacgttgttttggtctcataggtggtttggtgatgttcctttta |
17856131 |
T |
|
| Q |
130 |
gagagcagtttcccaggttgtttgatttagctg |
162 |
Q |
| |
|
| |||| ||||| ||||||||||| ||||||| |
|
|
| T |
17856130 |
gtgagcggtttcgtaggttgtttgacttagctg |
17856098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 11234107 - 11234292
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
11234107 |
agagatggtgatgctagagtagggggtagttggtttggtgatagtgtgcgtaggaaggtgagtgctggtactgatacgttgttttggtttcactggtggt |
11234206 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatgatgtcc |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
11234207 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattattgtggctaacatgttgtcc |
11234292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 9668634 - 9668813
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
9668634 |
agagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcataggaaggtgggtgatggttctgatacgttgttttggtttcactggtggt |
9668733 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9668734 |
gtggcggggcgccccttagagagcagtttcccaggttgttcgatttagctgtagacaaatatactactgtggctaacatg |
9668813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 10598174 - 10598043
Alignment:
| Q |
57 |
gtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttagagagcagtttcccaggttgtttgatt |
156 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
10598174 |
gtgcgtaggaaggtgggtgatggttctgatacgttgttttggtttcactggtggtgtggaggggcgccccttagagagcagtttcccaggttgttcgatt |
10598075 |
T |
|
| Q |
157 |
tagctgtagacaaatatattactgtggctaac |
188 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |
|
|
| T |
10598074 |
tagctgtagacaaatatattactgttgctaac |
10598043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 13086051 - 13085867
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
13086051 |
agagatggtgatggtggagcagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggtactgatacgttgttttggtttcattggtggt |
13085952 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatgatgtc |
196 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
13085951 |
gtggaggggcgcctcttagagagctgtttcccaggttgtttgatttagctgtagacaaatatatttctatggctaacatgttgtc |
13085867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 144; Significance: 7e-76; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 17827812 - 17827633
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||||| |
|
|
| T |
17827812 |
agagatgatggtggtggagtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatgggactgatacgttgttttggtatcactggtggt |
17827713 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17827712 |
gtggaggggcgcctcttagaaagcagtttccgaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
17827633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 39430789 - 39430611
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||| |||||||||| |
|
|
| T |
39430789 |
agagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgttgttt-ggttccactggtggt |
39430691 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
39430690 |
gtggaggggcgccccttagagagcagtttcccaggttgtttgatttagctgtagacaaatatactactgtagctaacatg |
39430611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 12 - 197
Target Start/End: Complemental strand, 20796180 - 20795995
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
20796180 |
agagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgttgttttggtttcactggtggt |
20796081 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatgatgtcc |
197 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||| ||||||| |||||||||||||| || ||| ||||||||| ||||| |
|
|
| T |
20796080 |
gtggaggggcgccccttagagagcaatttcccaggttgttcgatttagttgtagacaaatatactattgtagctaacatgttgtcc |
20795995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 49264592 - 49264771
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggt |
111 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
49264592 |
agagatggtgatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatggttctgatacgctgttttggtttcactggtggt |
49264691 |
T |
|
| Q |
112 |
gtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||| ||||||||| |
|
|
| T |
49264692 |
gtggcggggcgccccttagagagcagtttcccaggttgttcgatttagctgtagacaaatatactcctgtagctaacatg |
49264771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 114; Significance: 5e-58; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 43253401 - 43253538
Alignment:
| Q |
60 |
cgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttagagagcagtttcccaggttgtttgatttag |
159 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43253401 |
cgtaggaaggtgggtgatggtactgatacgttgttttggtttcactggtgatgtggagaggcgcctcttagagagcagtttcccaggttgtttgatttag |
43253500 |
T |
|
| Q |
160 |
ctgtagacaaatatattactgtggctaacatgatgtcc |
197 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
43253501 |
ctgtagaaaaatatattactgtggctaacatgttgtcc |
43253538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 24794268 - 24794090
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtg |
112 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||| || ||||| ||||||||| ||||||||||| |
|
|
| T |
24794268 |
gagatggggatggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggcgatgggaccgatacgttgttttggcagcactggtggtg |
24794169 |
T |
|
| Q |
113 |
tggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||| | ||||||||||||||| |||||| |||||||||||||||||| | ||||| ||||| |||| ||||||||| |
|
|
| T |
24794168 |
tggccgagcgcctcttagagagttgtttccgaggttgtttgatttagctatgaacaaagatatttctgtagctaacatg |
24794090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 32 - 191
Target Start/End: Original strand, 11393996 - 11394155
Alignment:
| Q |
32 |
agggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttaga |
131 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||| | ||||||| |||| ||||||||| | |||||||||||| |
|
|
| T |
11393996 |
agggggtagttggtttggtgatagagtgcgtaggaaggtgggtgatgggactgatacgtggttttggcagcactagtggtgtggcagagcgcctcttaga |
11394095 |
T |
|
| Q |
132 |
gagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||| |||||| |||||||||||||||||||| ||||| ||||| |||| ||||||||| |
|
|
| T |
11394096 |
gagttgtttccgaggttgtttgatttagctgtgaacaaagatatttctgtagctaacatg |
11394155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 43249420 - 43249472
Alignment:
| Q |
12 |
agagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtag |
64 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
43249420 |
agagatggtgatggtggagtagggggtagttggtttggtgatagtgtgcgtag |
43249472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 42953123 - 42953301
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtg |
112 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
42953123 |
gagatggggatggcggagtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatgggactgatacgttgttttggcagcactggtggtg |
42953222 |
T |
|
| Q |
113 |
tggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
|||||| | ||||||||||||| |||||| |||||||||||||||||||| ||||| ||||| |||| ||||||||| |
|
|
| T |
42953223 |
tggaggagtgcctcttagagagttgtttccgaggttgtttgatttagctgtgaacaaagatatttctgtagctaacatg |
42953301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 4524263 - 4524405
Alignment:
| Q |
21 |
gatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtgtggagggg |
120 |
Q |
| |
|
||||| || ||||||||||| || || |||| ||||||| ||||||||||| | ||| |||||||| |||||||||| ||| | ||||||||||| | |
|
|
| T |
4524263 |
gatggcggtgtagggggtagatggttcggtgctagtgtgagtaggaaggtgggggatatgactgatacgttgttttggtatcatagatggtgtggaggtg |
4524362 |
T |
|
| Q |
121 |
cgcctcttagagagcagtttcccaggttgtttgatttagctgt |
163 |
Q |
| |
|
|||||||| |||| ||||| ||||||| || |||||||| |
|
|
| T |
4524363 |
ttcctcttagggagcggtttctgaggttgtacgaattagctgt |
4524405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 163
Target Start/End: Original strand, 21740152 - 21740302
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtg |
112 |
Q |
| |
|
||||||| ||||| | |||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| || |||||||| |
|
|
| T |
21740152 |
gagatggggatggcgatgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggtgatgagactggtacgttgttttggcagcattggtggtg |
21740251 |
T |
|
| Q |
113 |
tggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgt |
163 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21740252 |
tggaggggcgcctcttagagagcagtttccgaggttgtttgatttagctgt |
21740302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 67 - 197
Target Start/End: Complemental strand, 10868179 - 10868049
Alignment:
| Q |
67 |
aggtgagtgatggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtaga |
166 |
Q |
| |
|
||||| ||||||| |||||||| |||||||||| |||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||||||| |||| | |
|
|
| T |
10868179 |
aggtgggtgatgggactgatacgttgttttggtatcactggtggtgtgaaggggagccccttagagagcagttttcgaggttgtttgatttagttgtaaa |
10868080 |
T |
|
| Q |
167 |
caaatatattactgtggctaacatgatgtcc |
197 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |
|
|
| T |
10868079 |
caaatatattactgtggctaacatgttgtcc |
10868049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 14864094 - 14864160
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatgg |
79 |
Q |
| |
|
||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
14864094 |
gagatggggatggtggtgtagggggtagttggtttggtgatagtgtgcgtcggaaggtgggtgatgg |
14864160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 14866262 - 14866334
Alignment:
| Q |
76 |
atggtactgatacattgttttggtttcactggtggtgtggaggggcgcctcttagagagcagtttcccaggtt |
148 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||| |||||| ||||| |
|
|
| T |
14866262 |
atgggactgatacattgttttgacatcactggtggtgtggcgaagcgcctcttagagagttgtttccgaggtt |
14866334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 19513094 - 19513272
Alignment:
| Q |
13 |
gagatggtgatggtggagtagggggtagttgatttggtgatagtgtgcgtaggaaggtgagtgatggtactgatacattgttttggtttcactggtggtg |
112 |
Q |
| |
|
||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||| | |||||| ||||||||| ||||||| ||| |
|
|
| T |
19513094 |
gagatggggagggtggtgtagggggtagttggtttggtgatagtgtgcgtaggaaggtgggcgatgggaatgatacgttgttttggcagcactggtagtg |
19513193 |
T |
|
| Q |
113 |
tggaggggcgcctcttagagagcagtttcccaggttgtttgatttagctgtagacaaatatattactgtggctaacatg |
191 |
Q |
| |
|
||| || ||||||||||||||| |||| | |||||||||||||||| ||| ||||| ||||| |||| ||||||||| |
|
|
| T |
19513194 |
tggcggagcgcctcttagagagttgttttcgaggttgtttgatttagttgtgaacaaagatatttctgtagctaacatg |
19513272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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