View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1031_low_10 (Length: 308)

Name: NF1031_low_10
Description: NF1031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1031_low_10
NF1031_low_10
[»] chr6 (23 HSPs)
chr6 (1-159)||(32869703-32869863)
chr6 (1-158)||(22880574-22880733)
chr6 (1-157)||(11427643-11427801)
chr6 (1-159)||(17598579-17598739)
chr6 (3-159)||(29857854-29858012)
chr6 (1-157)||(6209383-6209540)
chr6 (1-152)||(31976273-31976426)
chr6 (15-157)||(23128043-23128188)
chr6 (1-124)||(31109351-31109475)
chr6 (16-153)||(15832617-15832756)
chr6 (1-152)||(31110683-31110834)
chr6 (1-152)||(4231573-4231726)
chr6 (1-152)||(15989964-15990117)
chr6 (1-152)||(30341282-30341435)
chr6 (1-127)||(28536436-28536561)
chr6 (1-152)||(15507946-15508099)
chr6 (1-152)||(31952952-31953105)
chr6 (7-155)||(946407-946557)
chr6 (2-152)||(12732508-12732659)
chr6 (20-137)||(30870058-30870176)
chr6 (2-44)||(7273269-7273310)
chr6 (2-44)||(7367674-7367715)
chr6 (2-44)||(26669943-26669984)
[»] chr3 (42 HSPs)
chr3 (1-159)||(33644225-33644385)
chr3 (1-156)||(53982036-53982193)
chr3 (1-159)||(52629325-52629485)
chr3 (4-156)||(31456717-31456871)
chr3 (1-156)||(49607439-49607596)
chr3 (1-159)||(54868810-54868970)
chr3 (1-157)||(17470430-17470588)
chr3 (1-152)||(8076418-8076571)
chr3 (1-152)||(20764837-20764990)
chr3 (1-152)||(26141452-26141607)
chr3 (1-155)||(36707347-36707499)
chr3 (1-159)||(48587016-48587166)
chr3 (1-152)||(11347844-11347997)
chr3 (6-152)||(51419282-51419430)
chr3 (6-154)||(9563029-9563179)
chr3 (1-158)||(11095283-11095428)
chr3 (1-152)||(41189686-41189839)
chr3 (1-137)||(33118788-33118926)
chr3 (1-155)||(27714822-27714966)
chr3 (7-152)||(30801655-30801802)
chr3 (1-127)||(36331277-36331404)
chr3 (1-152)||(26754720-26754873)
chr3 (2-152)||(35536652-35536804)
chr3 (3-137)||(47531892-47532027)
chr3 (1-152)||(14623761-14623914)
chr3 (1-144)||(13897985-13898130)
chr3 (1-152)||(45058475-45058627)
chr3 (2-152)||(8956788-8956940)
chr3 (2-152)||(42823137-42823289)
chr3 (17-127)||(1758405-1758515)
chr3 (60-152)||(35965704-35965798)
chr3 (3-101)||(24699928-24700027)
chr3 (28-152)||(48375628-48375754)
chr3 (53-135)||(39670088-39670171)
chr3 (5-115)||(41080737-41080847)
chr3 (61-127)||(43746424-43746491)
chr3 (62-127)||(21746136-21746202)
chr3 (20-92)||(11907415-11907488)
chr3 (2-46)||(52629951-52629994)
chr3 (2-44)||(46941178-46941219)
chr3 (2-44)||(53581792-53581833)
chr3 (4-44)||(40480874-40480913)
[»] chr7 (42 HSPs)
chr7 (1-160)||(19329867-19330028)
chr7 (1-157)||(8080300-8080458)
chr7 (1-158)||(7389414-7389572)
chr7 (3-157)||(4999431-4999587)
chr7 (1-159)||(38837242-38837402)
chr7 (1-158)||(40957732-40957891)
chr7 (1-157)||(35137558-35137716)
chr7 (6-156)||(38267070-38267222)
chr7 (6-157)||(32951410-32951563)
chr7 (1-137)||(3784020-3784157)
chr7 (1-156)||(3434587-3434734)
chr7 (1-147)||(19436114-19436262)
chr7 (1-127)||(8238238-8238365)
chr7 (1-128)||(3694392-3694520)
chr7 (2-152)||(35522902-35523054)
chr7 (1-152)||(46033723-46033876)
chr7 (1-158)||(36362051-36362198)
chr7 (36-157)||(11044238-11044361)
chr7 (1-157)||(36361842-36361988)
chr7 (1-135)||(31735909-31736037)
chr7 (1-152)||(38044222-38044375)
chr7 (1-152)||(21234426-21234579)
chr7 (1-152)||(22343386-22343539)
chr7 (1-152)||(41915766-41915919)
chr7 (157-225)||(32853842-32853910)
chr7 (1-127)||(32564374-32564501)
chr7 (17-152)||(16374746-16374883)
chr7 (1-137)||(18207205-18207341)
chr7 (17-137)||(41423723-41423844)
chr7 (1-108)||(36208198-36208306)
chr7 (10-135)||(27744249-27744375)
chr7 (53-133)||(26296721-26296802)
chr7 (17-152)||(2318163-2318302)
chr7 (1-127)||(40846061-40846188)
chr7 (53-152)||(7727983-7728084)
chr7 (92-152)||(46374746-46374807)
chr7 (1-152)||(39255846-39255998)
chr7 (174-223)||(32848096-32848145)
chr7 (1-70)||(46374808-46374877)
chr7 (53-152)||(35468777-35468878)
chr7 (2-44)||(32029751-32029792)
chr7 (62-152)||(1766703-1766795)
[»] chr2 (40 HSPs)
chr2 (1-156)||(28863480-28863637)
chr2 (3-156)||(17473047-17473202)
chr2 (3-159)||(7465650-7465808)
chr2 (1-156)||(13438368-13438525)
chr2 (1-159)||(19930735-19930895)
chr2 (1-156)||(10249300-10249457)
chr2 (1-137)||(9058505-9058642)
chr2 (1-156)||(32505566-32505723)
chr2 (1-157)||(40701503-40701661)
chr2 (1-154)||(33436020-33436175)
chr2 (1-156)||(30915488-30915645)
chr2 (2-152)||(20700841-20700993)
chr2 (1-157)||(28381572-28381730)
chr2 (1-152)||(40613824-40613977)
chr2 (1-157)||(4060710-4060868)
chr2 (1-156)||(5574418-5574563)
chr2 (1-156)||(38882729-38882888)
chr2 (2-137)||(2533150-2533285)
chr2 (1-147)||(42257218-42257366)
chr2 (3-147)||(38273070-38273215)
chr2 (1-127)||(2997435-2997562)
chr2 (2-157)||(27864730-27864874)
chr2 (6-137)||(36168866-36168998)
chr2 (1-118)||(17819961-17820079)
chr2 (1-152)||(43490146-43490299)
chr2 (3-152)||(13365380-13365531)
chr2 (1-152)||(3440004-3440157)
chr2 (17-152)||(38732395-38732532)
chr2 (1-127)||(45097683-45097810)
chr2 (61-152)||(44152012-44152105)
chr2 (1-103)||(26891476-26891579)
chr2 (53-152)||(17823865-17823966)
chr2 (26-152)||(3034905-3035033)
chr2 (66-152)||(41758677-41758765)
chr2 (19-152)||(3737986-3738121)
chr2 (7-108)||(41575168-41575271)
chr2 (61-137)||(21301438-21301515)
chr2 (3-115)||(33436238-33436351)
chr2 (2-44)||(16096873-16096914)
chr2 (2-44)||(42849793-42849834)
[»] chr8 (38 HSPs)
chr8 (1-159)||(14547947-14548107)
chr8 (1-156)||(12831072-12831229)
chr8 (1-156)||(504039-504196)
chr8 (1-156)||(15197358-15197515)
chr8 (2-156)||(23122515-23122671)
chr8 (1-159)||(34012211-34012371)
chr8 (1-152)||(40423865-40424018)
chr8 (1-156)||(44507006-44507162)
chr8 (1-156)||(1179858-1180015)
chr8 (20-156)||(9122229-9122367)
chr8 (1-137)||(5957855-5957992)
chr8 (1-152)||(8841354-8841507)
chr8 (1-137)||(37038504-37038641)
chr8 (3-152)||(43414503-43414654)
chr8 (6-152)||(10284553-10284701)
chr8 (1-137)||(15048119-15048256)
chr8 (69-158)||(42710210-42710301)
chr8 (1-153)||(24307714-24307868)
chr8 (1-152)||(4854785-4854938)
chr8 (17-152)||(16056323-16056460)
chr8 (1-152)||(34307241-34307394)
chr8 (1-103)||(10621059-10621162)
chr8 (1-119)||(16383402-16383521)
chr8 (1-153)||(30479395-30479549)
chr8 (1-137)||(42221540-42221677)
chr8 (53-152)||(32707925-32708028)
chr8 (64-152)||(42354510-42354600)
chr8 (1-152)||(32032750-32032902)
chr8 (1-137)||(25838222-25838351)
chr8 (19-152)||(15258851-15258986)
chr8 (1-126)||(17443850-17443976)
chr8 (1-115)||(20074902-20075009)
chr8 (1-135)||(14055532-14055667)
chr8 (59-152)||(40467783-40467878)
chr8 (2-44)||(30912496-30912537)
chr8 (2-65)||(29705466-29705528)
chr8 (2-44)||(2547121-2547162)
chr8 (64-137)||(30183814-30183887)
[»] chr4 (38 HSPs)
chr4 (1-157)||(41236372-41236530)
chr4 (2-156)||(48182967-48183123)
chr4 (1-156)||(6034069-6034226)
chr4 (1-157)||(11511380-11511537)
chr4 (1-160)||(42044281-42044442)
chr4 (3-157)||(24995024-24995180)
chr4 (1-152)||(50052350-50052503)
chr4 (1-134)||(480388-480522)
chr4 (6-158)||(23608265-23608419)
chr4 (1-154)||(54473453-54473608)
chr4 (1-152)||(29239911-29240064)
chr4 (1-152)||(31910217-31910370)
chr4 (15-152)||(41823921-41824060)
chr4 (3-115)||(29234205-29234318)
chr4 (1-137)||(50526109-50526246)
chr4 (1-144)||(40574804-40574949)
chr4 (1-152)||(19670638-19670791)
chr4 (1-152)||(55475216-55475369)
chr4 (5-156)||(53352492-53352637)
chr4 (1-115)||(3481679-3481794)
chr4 (1-127)||(17983691-17983818)
chr4 (1-152)||(47986233-47986385)
chr4 (1-135)||(29977910-29978045)
chr4 (1-152)||(50813814-50813967)
chr4 (1-152)||(29547881-29548034)
chr4 (5-147)||(29589667-29589811)
chr4 (1-126)||(28480217-28480343)
chr4 (1-126)||(28481092-28481218)
chr4 (1-126)||(28481967-28482093)
chr4 (1-127)||(32766983-32767110)
chr4 (1-152)||(18924417-18924570)
chr4 (20-107)||(48647694-48647782)
chr4 (1-119)||(44536702-44536820)
chr4 (6-116)||(47104574-47104685)
chr4 (1-115)||(8343123-8343238)
chr4 (16-136)||(56300104-56300225)
chr4 (1-115)||(55079673-55079789)
chr4 (3-44)||(33703266-33703306)
[»] chr1 (40 HSPs)
chr1 (1-157)||(27564652-27564810)
chr1 (1-158)||(9474792-9474951)
chr1 (1-156)||(48716200-48716357)
chr1 (1-155)||(37649223-37649379)
chr1 (3-156)||(41758832-41758987)
chr1 (1-156)||(47452238-47452395)
chr1 (1-157)||(2581940-2582098)
chr1 (1-157)||(38595179-38595337)
chr1 (1-156)||(3000344-3000501)
chr1 (1-152)||(32813272-32813425)
chr1 (1-137)||(38632259-38632396)
chr1 (1-152)||(50630483-50630636)
chr1 (6-157)||(43162-43315)
chr1 (1-137)||(51898621-51898758)
chr1 (1-156)||(8346305-8346463)
chr1 (1-158)||(44548301-44548451)
chr1 (1-135)||(45044500-45044635)
chr1 (1-152)||(49811449-49811602)
chr1 (2-157)||(26274458-26274612)
chr1 (6-124)||(13414791-13414910)
chr1 (1-127)||(50590948-50591075)
chr1 (2-127)||(5958948-5959074)
chr1 (1-144)||(11152308-11152453)
chr1 (1-144)||(37926368-37926513)
chr1 (1-127)||(41608441-41608568)
chr1 (1-135)||(23597031-23597166)
chr1 (1-152)||(47748468-47748620)
chr1 (19-137)||(3302471-3302590)
chr1 (17-112)||(44454020-44454116)
chr1 (6-137)||(26440764-26440886)
chr1 (53-127)||(44332319-44332394)
chr1 (20-152)||(6260914-6261048)
chr1 (19-101)||(48489343-48489426)
chr1 (92-149)||(9501586-9501643)
chr1 (2-65)||(750239-750301)
chr1 (2-44)||(4401453-4401494)
chr1 (2-44)||(7447950-7447991)
chr1 (2-44)||(24769433-24769474)
chr1 (1-71)||(44334175-44334245)
chr1 (2-44)||(50448194-50448235)
[»] chr5 (33 HSPs)
chr5 (1-158)||(2740299-2740458)
chr5 (1-158)||(18520800-18520959)
chr5 (1-156)||(14831839-14831996)
chr5 (1-159)||(33149553-33149713)
chr5 (1-159)||(40145432-40145592)
chr5 (1-156)||(35785224-35785381)
chr5 (5-137)||(36732880-36733013)
chr5 (1-148)||(13811677-13811826)
chr5 (1-137)||(15409548-15409685)
chr5 (1-152)||(6679723-6679876)
chr5 (1-152)||(31009013-31009166)
chr5 (1-152)||(35943814-35943967)
chr5 (1-114)||(28177800-28177914)
chr5 (1-135)||(26720541-26720676)
chr5 (1-135)||(26990290-26990425)
chr5 (1-102)||(42414275-42414377)
chr5 (1-152)||(2252090-2252243)
chr5 (1-152)||(3921187-3921340)
chr5 (1-152)||(33825246-33825399)
chr5 (1-123)||(36875564-36875678)
chr5 (24-156)||(31132392-31132516)
chr5 (1-137)||(6259939-6260076)
chr5 (24-135)||(39557457-39557569)
chr5 (2-152)||(39688819-39688971)
chr5 (48-135)||(2177436-2177524)
chr5 (6-135)||(20073456-20073586)
chr5 (7-152)||(9603844-9603991)
chr5 (20-101)||(21370048-21370130)
chr5 (2-44)||(33801594-33801635)
chr5 (111-159)||(16115247-16115296)
chr5 (1-115)||(16327926-16328041)
chr5 (22-124)||(38296249-38296352)
chr5 (30-67)||(41470425-41470462)
[»] scaffold0237 (1 HSPs)
scaffold0237 (3-159)||(4056-4214)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-158)||(10025-10184)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-137)||(867-1004)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-137)||(867-1004)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-152)||(152523-152676)
[»] scaffold0110 (1 HSPs)
scaffold0110 (6-152)||(8785-8933)
[»] scaffold0316 (1 HSPs)
scaffold0316 (19-101)||(17097-17175)
[»] scaffold0119 (1 HSPs)
scaffold0119 (2-44)||(810-851)
[»] scaffold0385 (1 HSPs)
scaffold0385 (2-46)||(11374-11417)


Alignment Details
Target: chr6 (Bit Score: 129; Significance: 9e-67; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 32869703 - 32869863
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32869703 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 32869802  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  32869803 taatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttt 32869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 22880733 - 22880574
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22880733 ggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 22880634  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  22880633 taatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcattactctt 22880574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 11427643 - 11427801
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  11427643 ggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 11427742  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11427743 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 11427801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 17598579 - 17598739
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||   |||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17598579 ggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 17598678  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactcttt 159  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  17598679 taatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcttt 17598739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 29857854 - 29858012
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||||||||||  ||| |||||||||||||| ||||||||||||| ||| ||| |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  29857854 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttccta 29857953  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29857954 atgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttt 29858012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6209540 - 6209383
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||| |||||||| ||||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  6209540 ggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttctcttttctctcctcttctctcttcc 6209441  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||||||| ||||||| | |||| ||||||||| ||| ||||||||||||||||||    
T  6209440 taatgcatgggatgtacaaagatgta-gggaataaagggtatctatgtatcattactct 6209383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31976273 - 31976426
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||| || |||| |||||||||||||| |||||||||| |||||  | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  31976273 ggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctcttttctctcctcttctctcttcc 31976372  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  31976373 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 31976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 23128188 - 23128043
Alignment:
Q  15 ctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtg 113  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  23128188 ctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgcatgggatg 23128089  T
Q  114 tacaagggtgtatgggaataaa--ggtgtctatgtatcattactct 157  Q
    ||||||||||||||| ||||||  | | ||||||||||||||||||    
T  23128088 tacaagggtgtatggaaataaaaggttctctatgtatcattactct 23128043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 31109475 - 31109351
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||||||||  ||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  31109475 ggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttttctctcctcttttctcttcc 31109376  T
Q  100 taatgcatggggtgtacaagggtgt 124  Q
    ||||||||||||| |||||||||||    
T  31109375 taatgcatggggtatacaagggtgt 31109351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 15832617 - 15832756
Alignment:
Q  16 tttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgt 114  Q
    |||||||||||||||||| | ||||||||||||||| ||| || ||||||  ||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  15832617 tttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttttttctcctcttctatcttcctaatgcatggggtgt 15832716  T
Q  115 acaagggtgtatgggaataaa-ggtgtctatgtatcatta 153  Q
    |||||||||||| |||||||| |||||||| |||||||||    
T  15832717 acaagggtgtattggaataaagggtgtctacgtatcatta 15832756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 31110834 - 31110683
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||| |||| |||  |||||||||||  |||  |||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  31110834 ggtggcaatacaccctttgacactcacaaaaa--tctgacacgtaaccacatggaccctgcacaagcacactttctcttttctctactcttctctcttcc 31110737  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcatt 152  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  31110736 taatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacatt 31110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4231573 - 4231726
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||| ||||||||||||| |||||||||| | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  4231573 ggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 4231672  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  4231673 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 4231726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 15990117 - 15989964
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  15990117 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 15990018  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  15990017 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 15989964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 30341435 - 30341282
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  30341435 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 30341336  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  30341335 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30341282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28536561 - 28536436
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||  | ||||||||||||||||| |||||||||  |||| | ||||||| ||||||||||||||||||||| ||| |||||| |||||||    
T  28536561 ggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctcttttatcttctcttccctcttcc 28536464  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    || |||||||||||||||||||||||||    
T  28536463 tactgcatggggtgtacaagggtgtatg 28536436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 15508099 - 15507946
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  15508099 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 15508000  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||| ||||||  | | ||||||||||||||| ||||    
T  15507999 taatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatt 15507946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 31953105 - 31952952
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||||||||| |||| ||||||| ||  ||| | ||||| | ||||| ||||||||||||||  ||| ||||||||||||||    
T  31953105 ggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctcttctctcttcc 31953006  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || ||||||||||||| |||| |||||| ||||||| |||||||||||| ||||    
T  31953005 tagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 31952952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 946407 - 946557
Alignment:
Q  7 aatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgc 105  Q
    ||||||| |||||||||| || ||||| |||||||| ||||||||   | ||||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  946407 aatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttctctcctcttctctcttcctaatgc 946506  T
Q  106 atggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattact 155  Q
    ||| | ||||||||  ||||||  ||| ||| ||||| |||||||||||||    
T  946507 atgagatgtacaagaatgtatgacaataaaaagtgtcaatgtatcattact 946557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 12732508 - 12732659
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcct 100  Q
    ||||||||| | || ||||||||||||||||| |||||||||| |  | | ||| ||| || ||||||| |||||||||  |||||||||||||||| ||    
T  12732508 gtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctctttcatctcctcttctctctttct 12732607  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaaggtgtctatgtatcatt 152  Q
    | | |||  |||| ||||   ||||||| ||||||| |||||||||| ||||    
T  12732608 agtacataaggtgcacaaaaatgtatggaaataaagatgtctatgtaacatt 12732659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 30870058 - 30870176
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaa 118  Q
    ||||||| | |||| ||| ||| || |||||  |||||||||||||||||| |||||||||  |||||||||||||||| ||| |  || ||||||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctctttctagtatatagggtgtacaa 30870157  T
Q  119 gggtgtatgggaataaagg 137  Q
     ||||||||  ||||||||    
T  30870158 aggtgtatgaaaataaagg 30870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 7273269 - 7273310
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||| |||||||||||| |||||||||||||||||||||||||    
T  7273269 gtggtaatacactcttt-acacccacacaaaattctgacacgt 7273310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 7367715 - 7367674
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  7367715 gtggcaatacacccttt-acacccacacaaaattctgacacgt 7367674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 26669943 - 26669984
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  26669943 gtggcaatacacccttt-acacccacacaaaattctgacacgt 26669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 9e-67; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 33644225 - 33644385
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33644225 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 33644324  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  33644325 taatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcattactcttt 33644385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 53982036 - 53982193
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  53982036 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 53982135  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  53982136 taatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcattactc 53982193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 52629325 - 52629485
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  52629325 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcc 52629424  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataa-aggtgtctatgtatcattactcttt 159  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  52629425 taatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcattactcttt 52629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 31456717 - 31456871
Alignment:
Q  4 ggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaa 102  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  31456717 ggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcctaa 31456816  T
Q  103 tgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  31456817 tgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcattactc 31456871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49607439 - 49607596
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||| ||||||||    
T  49607439 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcc 49607538  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  49607539 taatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 49607596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 54868970 - 54868810
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  54868970 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcc 54868871  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactcttt 159  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  54868870 taatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactcttt 54868810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17470430 - 17470588
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  17470430 ggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttctctcatcttctctcttcc 17470529  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||||||| |||||||   |||||| ||||||| ||||||||||||||||||||||    
T  17470530 taatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcattactct 17470588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 8076418 - 8076571
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  8076418 ggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcc 8076517  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || ||||||||||||||||  ||||||| ||||||| |||||||||||| ||||    
T  8076518 tagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatt 8076571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 20764990 - 20764837
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| |||||||||||| |||||||||||||| |||||||||| | |||  |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  20764990 ggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttttctctcatcttctctcttcc 20764891  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  20764890 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 20764837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 26141607 - 26141452
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttc--tctctt 97  Q
    ||||||||||||| |||| |||||||||||||| |||||||||| |||||  ||||||| ||||||||||||||||||||| ||||||||||  ||||||    
T  26141607 ggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctcttttctctcctcttctttctctt 26141508  T
Q  98 cctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||||| |||||||||||||| |||||||| |||||| |||||||||||| ||||    
T  26141507 cctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 26141452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 36707499 - 36707347
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||| |||||||| |||||||||| ||||||||||||| ||| ||| |||||    |||||||||||||||| ||||||||||||||||||    
T  36707499 ggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacactttctcttttctctcctcttctctcttcc 36707404  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattact 155  Q
    ||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  36707403 taatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcattact 36707347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 48587166 - 48587016
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||||||||| ||| |||||||||| ||||||||||||||         ||||||||||    
T  48587166 ggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctttt---------ctctcttcct 48587076  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  48587075 aatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcattactcttt 48587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 11347997 - 11347844
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||  |||||||| |||||||||| |||||||||| | |||  |||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  11347997 ggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctcttttctctcctcttctctcttcc 11347898  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  11347897 taatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccatt 11347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 51419430 - 51419282
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||  |||| |||||||||||||| |||||||||| | |||   |||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  51419430 caatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttttctctcctattctctcttcctaatg 51419331  T
Q  105 catggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
     ||||||||||||||||||||||| ||| |||||||| |||||| ||||    
T  51419330 tatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacatt 51419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 9563029 - 9563179
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||  |||||||| ||| | |||| ||||||||||||||||| ||| || |||||| |||||||||||| || |||||||||||||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctcttctctcctcttctctcttcctaatg 9563128  T
Q  105 catggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattac 154  Q
    |||| | ||||||| |||||||||||||||| ||| |||||||||||||||    
T  9563129 catgagttgtacaaaggtgtatgggaataaagggtatctatgtatcattac 9563179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 11095428 - 11095283
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||   |||||||| || |||||||||||||||           ||||||||    
T  11095428 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttctctttt-----------ctcttcct 11095342  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  11095341 aatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 11095283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 41189839 - 41189686
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||   ||||||||||||| |||| | |||||||| | |||  ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  41189839 ggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcc 41189740  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||| ||||||||| |||||||| |||||| |||||||||||| ||||    
T  41189739 taatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacatt 41189686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33118926 - 33118788
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcct-cttctctcttc 98  Q
    |||| |||||||| ||||||||||||||||||| | ||||||||||||||| ||| ||| || || ||||||||||||||  |||||| ||||||||| |    
T  33118926 ggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctttcctctcctccttctctctcc 33118827  T
Q  99 ctaatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||| |||||||||||||||||||||||||| ||||||||    
T  33118826 ctagtgcatggggtgtacaagggtgtatggaaataaagg 33118788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 27714966 - 27714822
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||           |||||||||||||     
T  27714966 ggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc-----------tcttctctcttccc 27714878  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcattact 155  Q
    ||| ||||||||||||||||||||| | |||||||| |||| ||||||||||||||    
T  27714877 aatacatggggtgtacaagggtgtacgagaataaagagtgtatatgtatcattact 27714822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 30801802 - 30801655
Alignment:
Q  7 aatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgc 105  Q
    ||||||| |||||| |||||||||||| | ||||| |||||||   ||||||| |||||||||| |||||||||  |||| ||||||||||||||| | |    
T  30801802 aatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcctctcatcttctctcttcctagtac 30801703  T
Q  106 atggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  30801702 atggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 30801655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 36331404 - 36331277
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||| ||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  36331404 ggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 36331305  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||||||||||||||||||||||    
T  36331304 taatacatggggtgtacaagggtgtatg 36331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 26754720 - 26754873
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||| |||| |||||||||| ||||||| || |||||  |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  26754720 ggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctcttcc 26754819  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcatt 152  Q
    ||    || |||||||||| ||||||||| ||||||| ||||||||||| ||||    
T  26754820 tagaatatagggtgtacaaaggtgtatggaaataaagagtgtctatgtaacatt 26754873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 35536652 - 35536804
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    ||||||||||||  ||||||||||||| |||| | |||||||| |||| | |||||   ||||||||||||| ||||||  ||| |||||||||||||||    
T  35536652 gtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcct 35536751  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    | ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  35536752 agtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 35536804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 47531892 - 47532027
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||||||||||  ||| ||| |||||||| | |||||||||| | ||   | ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  47531892 tggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttttctctcctattctctcttccta 47531991  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||| ||||  |||||||| |||||||||||||||||    
T  47531992 atgtatggaatgtacaagtgtgtatgggaataaagg 47532027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 14623914 - 14623761
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||||||||| |||| ||||||| ||  ||| | ||||| | ||||||||||||||||||||  ||| |||||||||||| |    
T  14623914 ggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctttc 14623815  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || |||||| |||||| |||| |||||| ||||||| |||||||||||| ||||    
T  14623814 tagtgcatgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacatt 14623761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13898130 - 13897985
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||||||||| |||| ||||||||||  ||| | ||||| | ||||||||||||||||||||  ||| ||||||||||| ||    
T  13898130 ggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctccc 13898031  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctat 144  Q
    || || |||||||||| ||  ||||||| ||||||| |||||||||    
T  13898030 tagtgtatggggtgtagaaaagtgtatgagaataaatggtgtctat 13897985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 45058627 - 45058475
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||| |||||||||| |||| ||||||| ||   ||   |||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  45058627 ggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttctctttcttcttctcttctctcttcc 45058529  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||| ||||||||  | | ||||||||||||||| ||||    
T  45058528 taatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgtaacatt 45058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 8956788 - 8956940
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    |||||||||||  |||||||||||||| |||| | ||||||||  ||| | |||||   ||||||||||||| ||||||  ||| |||||||||||||||    
T  8956788 gtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcct 8956887  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    | ||||  ||||||| ||||||||||| ||||||| | |||||||||| ||||    
T  8956888 agtgcacagggtgtagaagggtgtatgagaataaatgctgtctatgtaacatt 8956940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 42823137 - 42823289
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcct 100  Q
    |||| ||||||| | |||||||||||| |||| | ||||| || ||||   |||||||||| ||| | ||||||||||| || | |||||||||||||||    
T  42823137 gtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctctttcttattctcttctctcttcct 42823236  T
Q  101 aatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||| |||| ||||||||||||||||||  | | ||||||||||||||| ||||    
T  42823237 aatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 42823289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 1758515 - 1758405
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgta 115  Q
    ||||||||||||||||| |||||||  | || ||| |||| || ||||| |||| |||||||||  |||||||||||||||||||||||||| |||||||    
T  1758515 ttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattttctctttcatctcctcttctctcttcctaatgcat-gggtgta 1758417  T
Q  116 caagggtgtatg 127  Q
    ||| ||||||||    
T  1758416 caaaggtgtatg 1758405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 60 - 152
Target Start/End: Complemental strand, 35965798 - 35965704
Alignment:
Q  60 gcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||||||||||||||||||||  ||||||||| ||| ||| |||| |||| |||||||||||||||||| |||| ||||||||||||||| ||||    
T  35965798 gcacaagcacactttctctttcctctcctcttttcttttcttaattcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacatt 35965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 24700027 - 24699928
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttccta 101  Q
    |||||||||||  ||||||||||||| |||| |||| ||||| | |||| |||||| | |||| ||||||||||||||  ||||||||||||||||||||    
T  24700027 tggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctctttcctctcctcttctctcttccta 24699928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 48375754 - 48375628
Alignment:
Q  28 acaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtat 126  Q
    |||||| ||||||  || |||||  |||||||||||||||||| |||||||||  ||||||||||||||||||||    || |||||||||| | |||||    
T  48375754 acaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctcttcctagaatatagggtgtacaaagatgtat 48375655  T
Q  127 gggaataaa-ggtgtctatgtatcatt 152  Q
    || |||||| |||||||||||| ||||    
T  48375654 ggaaataaagggtgtctatgtaacatt 48375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 39670088 - 39670171
Alignment:
Q  53 ggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| || ||| |||||||| ||||||| ||||||||||||||||| ||||| ||| | |||||||||||||| || ||||||    
T  39670088 ggacctcgtacacgcacacttcctcttttctctcctcttctctcttcttaatgtatgagatgtacaagggtgtacggaaataaa 39670171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 41080737 - 41080847
Alignment:
Q  5 gcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaat 103  Q
    |||| |||| ||||||||||||| ||||| ||||| | || |||| | ||||||  |||||||||| |||||||||  |||||||||||||||||||| |    
T  41080737 gcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccca-cacaagcacattttctctttcatctcctcttctctcttcctagt 41080835  T
Q  104 gcatggggtgta 115  Q
     ||| |||||||    
T  41080836 acatagggtgta 41080847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 43746424 - 43746491
Alignment:
Q  61 cacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatg 127  Q
    ||||| |||| |||||||||  ||||||||||| |||||||| |||||| ||||||||||||||||||    
T  43746424 cacaaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatg 43746491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 21746202 - 21746136
Alignment:
Q  62 acaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatg 127  Q
    |||||||||||||||||||  |||| ||||||||||||| |||  ||| ||||||||||||||||||    
T  21746202 acaagcacactttctctttcatctcatcttctctcttccaaatatatgaggtgtacaagggtgtatg 21746136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 11907415 - 11907488
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttct 92  Q
    |||| ||||||||| ||||||| || ||||   |||||||||||||||||| |||||||||| |||||||||||    
T  11907415 acactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctcttttctctcctcttct 11907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 52629994 - 52629951
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtag 46  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  52629994 gtggcaatacacccttt-acacccacacaaaattctgacacgtag 52629951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 46941219 - 46941178
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  46941219 gtggcaatacactcttt-acacccacataaaattctgacacgt 46941178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 53581792 - 53581833
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  53581792 gtggcaatacacccttt-acacccacacaaaattctgacacgt 53581833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 40480913 - 40480874
Alignment:
Q  4 ggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  40480913 ggcaatacacccttt-acacccacacaaaattctgacacgt 40480874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 19329867 - 19330028
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19329867 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 19329966  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttta 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19329967 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttta 19330028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 8080458 - 8080300
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8080458 ggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 8080359  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8080358 tattgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 8080300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 7389414 - 7389572
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  7389414 ggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctactctctcttcc 7389513  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactctt 158  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  7389514 taatacatggggtgtac-agggtgtatgggaataaaggatgtctatgtatcattactctt 7389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 4999587 - 4999431
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4999587 tggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttttatctcctcttctctcttccta 4999488  T
Q  102 atgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactct 157  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4999487 atgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactct 4999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 38837242 - 38837402
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||  ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38837242 ggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 38837341  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  38837342 taatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttt 38837402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 40957732 - 40957891
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||| |||| |||||||||||||    
T  40957732 ggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttttctctcatcttctctcttcc 40957831  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataa-aggtgtctatgtatcattactctt 158  Q
    ||||||||||||||||||||||||||||  |||||  |||||||||||||||||||||||    
T  40957832 taatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcattactctt 40957891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 35137558 - 35137716
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  35137558 ggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcc 35137657  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||||||| |||||||||||||||| ||| ||| ||| |||||| |||||||||||    
T  35137658 taatgcatgggatgtacaagggtgtatgagaacaaatggtatctatggatcattactct 35137716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 38267070 - 38267222
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38267070 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 38267169  T
Q  105 catggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||| ||||| | ||||||||| |||||| | | |||||||||||||||||    
T  38267170 catgggatgtacgaaggtgtatggaaataaatgatatctatgtatcattactc 38267222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 32951563 - 32951410
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||  |||| ||| |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  32951563 caatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaata 32951464  T
Q  105 catggggtgtacaagggtgtatgggaataa-aggtgtctatgtatcattactct 157  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  32951463 catggggtgtacaagggtgtatgagaataaggggtgtctatgtatcattactct 32951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3784020 - 3784157
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||   |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  3784020 ggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 3784119  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||||||||||||||||||  |||||| |||||||||    
T  3784120 taatgcatggggtgtacaagaatgtatgtgaataaagg 3784157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3434587 - 3434734
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||         ||||||||||||    
T  3434587 ggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctctt---------ttctctcttcct 3434677  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  3434678 aatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcattactc 3434734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 19436262 - 19436114
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||| ||||||||    
T  19436262 ggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttttctcttctcttttctcttcc 19436163  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgta 147  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19436162 taatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8238238 - 8238365
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  8238238 ggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 8238337  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||||||||||||||||||||||    
T  8238338 taatacatggggtgtacaagggtgtatg 8238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3694392 - 3694520
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  ||| |||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  3694392 ggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 3694491  T
Q  100 taatgcatggggtgtacaagggtgtatgg 128  Q
     ||||||||||||||||||| ||||||||    
T  3694492 caatgcatggggtgtacaagagtgtatgg 3694520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 35522902 - 35523054
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    ||||||||||||  ||| |||||||||||||| |||||||||| | ||   ||| ||||||||||||||||||||||||| |||| ||||||||||||||    
T  35522902 gtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttttctctcttcttctctcttcct 35523001  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  35523002 aatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacatt 35523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 46033876 - 46033723
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||||||||| |||| |||||||||| |||||  | || ||||||||||| | |||||||||| ||||||||||||| ||||    
T  46033876 ggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctcttttctctcctcttctctattcc 46033777  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  46033776 taatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatt 46033723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 36362051 - 36362198
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||| ||||||  ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||           |||||||||    
T  36362051 ggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt-----------tctcttcct 36362139  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    ||| |||||| |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  36362140 aatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcattactctt 36362198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 11044238 - 11044361
Alignment:
Q  36 ctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataa 134  Q
    |||||||||||||||| |||||||||||||| |||||||||||||  |||| |||||||||||||||||||||| ||||||||| ||||||||  |||||    
T  11044238 ctgacacgtagtcacgtggaccccgcacaagtacactttctctttcctctcatcttctctcttcctaatgcatgaggtgtacaaaggtgtatgaaaataa 11044337  T
Q  135 ag-gtgtctatgtatcattactct 157  Q
    || |||||||||||||||||||||    
T  11044338 agagtgtctatgtatcattactct 11044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 36361988 - 36361842
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||||||||||  ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||           |||||||||    
T  36361988 ggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttt-----------tctcttcct 36361900  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||| |||||  |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  36361899 aatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcattactct 36361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 31735909 - 31736037
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||||||| |||||||||||||       ||||| | |||  ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  31735909 ggtggcaatacactctttaacacccacacaaa-------cacgtggccacatggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 31736001  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31736002 taatgtatggggtgtacaagggtgtatgggaataaa 31736037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 38044222 - 38044375
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||| |||||||||| ||||||| |||| ||   |||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  38044222 ggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctctttcttcttctcttttctcttcc 38044321  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  38044322 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 38044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 21234426 - 21234579
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctt-tttctcctcttctctcttcc 99  Q
    |||| |||||||| ||||||||| ||||||||| | |||||||||| |||  | |||||||||||||||| ||||||||   |||||| | |||||||||    
T  21234426 ggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttctcttacctctcctttcctctcttcc 21234525  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||| ||||||||||||| |||||||| |||| ||||||||||||||| ||||    
T  21234526 taatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacatt 21234579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 22343386 - 22343539
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| ||   ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  22343386 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 22343485  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||| ||||||||||||||||||  | | ||||||||||||||| ||||    
T  22343486 taatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 22343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 41915766 - 41915919
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||||| |||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  41915766 ggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 41915865  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  41915866 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 41915919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 32853842 - 32853910
Alignment:
Q  157 tttagaacttatctacatacgtgttttgttttctagggtcaaatatggcattgggttgtttctgatgat 225  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  32853842 tttagaacttatctacatacgtgttttgctttctagggtcaaatatggcattgggttgtttgtgatgat 32853910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32564501 - 32564374
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || |  |   |||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  32564501 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttctctttcttcttctcttctctcttcc 32564402  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||| ||||||||||||||||||    
T  32564401 taatacatgaggtgtacaagggtgtatg 32564374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 16374883 - 16374746
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgta 115  Q
    |||||| |||||||||| |||||||||| |||||| ||| | | ||||||||||| ||||||||  |||| | |||||||||||||||| |||| |||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctttttctctcttcctaatgtatggagtgta 16374784  T
Q  116 caagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||| |||||||| ||||||| |||||||||||| ||||    
T  16374783 caaaggtgtatgagaataaagggtgtctatgtaacatt 16374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 18207205 - 18207341
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||   |||||||||| |||||| ||| |||||| | |||| | ||||| ||||||||||||||||||||  ||||||||||||||||||    
T  18207205 ggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctctttcatctcctcttctctcttcc 18207303  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || || || | |||||||||||||||||  ||||||||    
T  18207304 tagtggatagagtgtacaagggtgtatgataataaagg 18207341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 41423723 - 41423844
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgta 115  Q
    |||||||  |||||||| ||||||| || ||||||  || |||| ||||||| | |||||||||  |||||||||||||||||||| |||||||||||||    
T  41423723 ttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctctttcatctcctcttctctcttcctagtgcatggggtgta 41423822  T
Q  116 caagggtgtatgggaataaagg 137  Q
    ||| |||||||| |||||||||    
T  41423823 caaaggtgtatgagaataaagg 41423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36208198 - 36208306
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||| |||||| || |||||||||||||||||  |||||| || |||||| |||||| ||||||||||| |||||||||  ||||||||||||||||||    
T  36208198 ggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctcttcc 36208297  T
Q  100 taatgcatg 108  Q
    || ||||||    
T  36208298 tagtgcatg 36208306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 27744375 - 27744249
Alignment:
Q  10 acactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatg 108  Q
    |||| |||||| |||||||||||| ||||||| || | |||| ||| ||| || ||||||| ||||||| |  |||||||||||||||||||| ||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctcctcttctctcttcctagtgcatg 27744276  T
Q  109 gggtgtacaagggtgtatgggaataaa 135  Q
    || ||||||||| | ||||||||||||    
T  27744275 ggatgtacaaggatatatgggaataaa 27744249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 26296721 - 26296802
Alignment:
Q  53 ggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaata 133  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||    
T  26296721 ggaccccgcacaagcgcattttctcttttctctcctcttctctcttcttaatgtatgaggtgtacaagggtgtatggaaata 26296802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 2318302 - 2318163
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctct-tc-ctaatgcatggggtg 113  Q
    ||||||||||||||||| ||||||  || |||||| ||||||  || ||||| |||||||||||  |||| |||||||||| || ||||||||||| |||    
T  2318302 ttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctctttcatctcatcttctctctctctctaatgcatggagtg 2318203  T
Q  114 tacaagggtgtatgggaataaag-gtgtctatgtatcatt 152  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||    
T  2318202 tacaaaggtgtatggaaataaagtgtgtctatgtaacatt 2318163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 40846188 - 40846061
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||| |||||||||| ||| ||| ||||| |   |||||||||||||  ||||||||||||| |||| ||||||||||||||    
T  40846188 ggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttctctttcttcttctcttctctcttcc 40846089  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||   ||| | ||||||||||||||||    
T  40846088 taaaagatgagatgtacaagggtgtatg 40846061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 7727983 - 7728084
Alignment:
Q  53 ggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatca 150  Q
    |||||||||||||| ||||||||| ||| |||| ||||||||||||||||||  ||||||||||||||| ||||||  | | ||||||||||||||| ||    
T  7727983 ggaccccgcacaagtacactttctgtttcttcttctcttctctcttcctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaaca 7728082  T
Q  151 tt 152  Q
    ||    
T  7728083 tt 7728084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 46374807 - 46374746
Alignment:
Q  92 tctcttcctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  46374807 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 46374746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39255998 - 39255846
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||||||||||||   |||| ||||| |||||| |||||||||| | |||| |||| || |||||| |||||||||||||  ||||||||||||||||||    
T  39255998 ggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttctctttcatctcctcttctctcttcc 39255900  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
       || || |  ||||||||||||||||  |||||| |||||||||||| ||||    
T  39255899 cggtggatagaatgtacaagggtgtatgataataaagggtgtctatgtaacatt 39255846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 32848096 - 32848145
Alignment:
Q  174 tacgtgttttgttttctagggtcaaatatggcattgggttgtttctgatg 223  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  32848096 tacgtgttttgctttctagggtcaaatatggcattgagttatttctgatg 32848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 46374877 - 46374808
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcaca 70  Q
    |||||||| |||| |||| |||||||||||||| |||||||||| | |||  ||||||||||||||||||    
T  46374877 ggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 35468878 - 35468777
Alignment:
Q  53 ggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatca 150  Q
    |||||| |||||| ||||||||||||||  | |||||||||||||||||| | |||| | |||| |||| |||||| |||| |||||||| |||||| ||    
T  35468878 ggaccctgcacaaacacactttctctttcctatcctcttctctcttcctagttcatgagatgtataaggatgtatgagaataaaaggtgtatatgtaaca 35468779  T
Q  151 tt 152  Q
    ||    
T  35468778 tt 35468777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 32029751 - 32029792
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  32029751 gtggcaatacacccttt-acacccacacaaaattctgacacgt 32029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 1766795 - 1766703
Alignment:
Q  62 acaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcatt 152  Q
    |||||||||||||||||||  ||||||||||||||||| || |  ||| ||| |||||| || |||| ||| |||| ||||||||||| ||||    
T  1766795 acaagcacactttctctttcctctcctcttctctcttcgtagtatatgaggtatacaagagtatatgagaacaaagtgtgtctatgtaacatt 1766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 5e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 28863480 - 28863637
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28863480 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcc 28863579  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  28863580 taatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 28863637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 17473047 - 17473202
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17473047 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttccta 17473146  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  17473147 atgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 17473202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 7465808 - 7465650
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  7465808 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttatctcttcttctctcttccta 7465709  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7465708 atgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactcttt 7465650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13438368 - 13438525
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13438368 ggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 13438467  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  13438468 taatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 13438525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 19930895 - 19930735
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  19930895 ggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcc 19930796  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactcttt 159  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19930795 taatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattactcttt 19930735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10249457 - 10249300
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  10249457 ggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcc 10249358  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10249357 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 10249300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9058505 - 9058642
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9058505 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 9058604  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9058605 taatgcatggggtgtacaagagtgtatgggaataaagg 9058642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 32505723 - 32505566
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||     
T  32505723 ggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattttctctcctcttctctcttct 32505624  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  32505623 taatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcattactc 32505566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 40701503 - 40701661
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  40701503 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctcttcc 40701602  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactct 157  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  40701603 taatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactct 40701661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 33436175 - 33436020
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||    
T  33436175 ggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcatcttctctcttcc 33436076  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattac 154  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||    
T  33436075 taatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatgcatcattac 33436020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30915488 - 30915645
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  30915488 ggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcc 30915587  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactc 156  Q
    |||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  30915588 taatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 30915645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 20700841 - 20700993
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcct 100  Q
    |||||||||||| ||||||| || |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||||    
T  20700841 gtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctctttcctctcctcttctctcttcct 20700940  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  20700941 agtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 20700993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28381730 - 28381572
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  || ||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||| |||| |||||||||||||    
T  28381730 ggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttttctctcatcttctctcttcc 28381631  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  28381630 taatatatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactct 28381572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 40613977 - 40613824
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| | |||  ||||||||||||||||||||||||||||| |||||| |||| |||||     
T  40613977 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctattctttcttca 40613878  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  40613877 taatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatt 40613824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 4060710 - 4060868
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  ||||||| |||||||||| ||||||||||||| ||| ||| |||||| ||||||||||||| |||| |||| |||||||||||||    
T  4060710 ggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttttctctcatcttctctcttcc 4060809  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactct 157  Q
    ||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||    
T  4060810 taatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcattactct 4060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5574563 - 5574418
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcct 100  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||           |||||||||    
T  5574563 ggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt-----------tctcttcct 5574475  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5574474 aatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 5574418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 38882888 - 38882729
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggacccc---gcacaagcacactttctctttt-tctcctcttctctct 96  Q
    |||||||||| || |||||||| |||||||||| ||||||||||||||||| |||||||   |||||||| ||||||||||||| |||  |||| |||||    
T  38882888 ggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcactttctcttttctcttatcttatctct 38882790  T
Q  97 tcctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  38882789 tcctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcattactc 38882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 2533150 - 2533285
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    |||||||||||  |||||||||| |||||||| |||||||||||| |||   ||||||||||||||||||||| |||||| ||||||||||||||||||     
T  2533150 gtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttcttttatctcctcttctctcttccc 2533248  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    |||| ||||||||||||||||||||||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagg 2533285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 42257218 - 42257366
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||   ||||||||||||| |||| |||||||||| | |||  ||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  42257218 ggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttcttcc 42257317  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgta 147  Q
    ||||| |||||||||||||| |||||| | |||||| ||||||||||||    
T  42257318 taatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgta 42257366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 38273215 - 38273070
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| |||| |||||||||||||| |||||||||||| |||  ||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  38273215 tggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctcttttctctcctattctctcttccta 38273116  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgta 147  Q
    ||| ||||||||||||| | |||||| ||||||| ||||| ||||||    
T  38273115 atgtatggggtgtacaa-gatgtatgagaataaatggtgtttatgta 38273070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2997562 - 2997435
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  2997562 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 2997463  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||| ||||||||||||||||||    
T  2997462 taatacatgaggtgtacaagggtgtatg 2997435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 27864730 - 27864874
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttccta 101  Q
    |||||||||||| |||||||| |||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||            ||||||||||    
T  27864730 gtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttctctt------------tctcttccta 27864817  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    || |||||| |||||||||||||||| ||||||| |||||| |||||||||||||||    
T  27864818 atacatgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcattactct 27864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 36168866 - 36168998
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||  |||| || ||||||||||| | |||||||| | |||  |||||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  36168866 caatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttttctctcctattctctcttcctaatg 36168965  T
Q  105 catggggtgtacaagggtgtatgggaataaagg 137  Q
     |||||||||||||| ||||||| |||||||||    
T  36168966 tatggggtgtacaagagtgtatgagaataaagg 36168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17820079 - 17819961
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || || ||| ||||||| ||||| |||| |||||||||  ||||||||||||||||||    
T  17820079 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctctttcatctcctcttctctcttcc 17819980  T
Q  100 taatgcatggggtgtacaa 118  Q
    ||||||||| |||||||||    
T  17819979 taatgcatgaggtgtacaa 17819961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 43490146 - 43490299
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||| |||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  43490146 ggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatctttcttcttctcttctctcttcc 43490245  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| ||| |||||||||||||||||||  | | ||||||||||||||| ||||    
T  43490246 taatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 43490299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 152
Target Start/End: Original strand, 13365380 - 13365531
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttccta 101  Q
    |||||||| || | ||||||||||||||||| ||||||| ||   ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  13365380 tggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttccta 13365479  T
Q  102 atgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    || ||||||||||||||||||| |||  | | ||||||||||||||| ||||    
T  13365480 atacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgtaacatt 13365531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 3440004 - 3440157
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||||| | ||||||||||||||| ||| ||| ||  | ||| |||||||||||||||||| |||||||||  |||||||||||||||| |    
T  3440004 ggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctcctcttctctctttc 3440103  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||    || |||||||||| ||||||||| |||||| |||||||||||| ||||    
T  3440104 tagaatatagggtgtacaaaggtgtatggaaataaagggtgtctatgtaacatt 3440157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 38732395 - 38732532
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgta 115  Q
    ||||||||||||||||| ||||||| || ||||   |||||||||||||| ||||||||||||| |||| |||||||||||||||||| |||| | ||||    
T  38732395 ttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatgagatgta 38732494  T
Q  116 caagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||| ||||||  | | ||||||||||||||| ||||    
T  38732495 caaggatgtatgcaattaaaaggtgtctatgtaacatt 38732532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45097810 - 45097683
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  | |||||||||| |||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  45097810 ggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 45097711  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| ||| || |||||||| |||||||    
T  45097710 taatacatcggatgtacaagagtgtatg 45097683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 44152012 - 44152105
Alignment:
Q  61 cacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| | | |||||||||||||| |||| |||||||| |||||| ||||    
T  44152012 cacaagcacactttctctttcatctcctcttctctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacatt 44152105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 26891579 - 26891476
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | | ||||||||||||||| ||||||| || |||||| ||||| || ||||||||| |||||||||  ||| ||||||||||||||    
T  26891579 ggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttctctttcctcttctcttctctcttcc 26891480  T
Q  100 taat 103  Q
    ||||    
T  26891479 taat 26891476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 17823865 - 17823966
Alignment:
Q  53 ggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatca 150  Q
    |||||||  |||||||||||||||||||  |||| ||||||||||||| |||  ||||||||||||||||||||||  |||||||| |||||||||| ||    
T  17823865 ggaccccatacaagcacactttctctttcatctcatcttctctcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaaca 17823964  T
Q  151 tt 152  Q
    ||    
T  17823965 tt 17823966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 3035033 - 3034905
Alignment:
Q  26 acacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgt 124  Q
    |||||||| ||||||| || ||||   |||||||||||||| | ||||||||||| |||| |||||||||||||||||| |||| ||||||| | |||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatgaggtgtaccaaggtgt 3034934  T
Q  125 atgggaat-aaaggtgtctatgtatcatt 152  Q
    |||  | | ||||||||||||||| ||||    
T  3034933 atgcaattaaaaggtgtctatgtaacatt 3034905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 41758677 - 41758765
Alignment:
Q  66 gcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||| |||| ||| ||||||||||| ||||    
T  41758677 gcacattttctcttttatctcctcttctctcttcctaatatatggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatt 41758765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 3737986 - 3738121
Alignment:
Q  19 gacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtaca 117  Q
    ||||||||||||||| ||||||| || |||| | |||||||||||||||||| ||||| |||  ||||||||||| ||||||||    || |||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctcctcttctttcttcctagaatatagggtgtaca 3738085  T
Q  118 agggtgtatgggaata-aaggtgtctatgtatcatt 152  Q
    | ||||||||  |||| | |||||||||||| ||||    
T  3738086 aaggtgtatgaaaatatagggtgtctatgtaacatt 3738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 41575168 - 41575271
Alignment:
Q  7 aatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccg-cacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    ||||||| ||||||||  ||||||||| | ||||| || |||| | |||||||  ||||||||||||||||||||  |||||||||||||| ||||||||    
T  41575168 aatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctttcatctcctcttctctcgtcctaatg 41575267  T
Q  105 catg 108  Q
    ||||    
T  41575268 catg 41575271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 21301515 - 21301438
Alignment:
Q  61 cacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||| ||||||||||||||| ||| ||||||| |||||||| |||||| |||||||| | |||||||| ||||||||    
T  21301515 cacaaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtacatgagtgtatggaaataaagg 21301438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 33436238 - 33436351
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttccta 101  Q
    |||||||||||  ||||||||||||| |||| ||||||||||   || | ||||   |||||||||||||||||||||  | ||||||||||||||||||    
T  33436238 tggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttctctttcctatcctcttctctcttccta 33436337  T
Q  102 atgcatggggtgta 115  Q
     | |||| ||||||    
T  33436338 gttcatgaggtgta 33436351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 16096914 - 16096873
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  16096914 gtggcaatacacccttt-acacccacacaaaattctgacacgt 16096873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 42849793 - 42849834
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  42849793 gtggcaatacacccttt-acacccacacaaaattctgacacgt 42849834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 14547947 - 14548107
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14547947 ggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 14548046  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  14548047 taatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactcttt 14548107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 12831072 - 12831229
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12831072 ggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 12831171  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  12831172 taatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcattactc 12831229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 504196 - 504039
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  504196 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttttctctcatcttctctcttcc 504097  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  504096 taatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 504039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15197358 - 15197515
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  15197358 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctcttcc 15197457  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactc 156  Q
     |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  15197458 aaatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcattactc 15197515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 23122671 - 23122515
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  23122671 gtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttttctctcctgttctctcttcct 23122572  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  23122571 aatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 23122515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34012371 - 34012211
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  34012371 ggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 34012272  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  34012271 taatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactcttt 34012211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 40424018 - 40423865
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40424018 ggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 40423919  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  40423918 taatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 40423865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44507162 - 44507006
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||| |||| |||||||||||||    
T  44507162 ggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttttctctcatcttctctcttcc 44507063  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaaggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  44507062 taatgcatggggtgtacaagggtgtatgagaataaatatgtctatgtatcattactc 44507006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 1180015 - 1179858
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||||||| | |||  |||||||||||||||||||||||| ||||||||||||||||||    
T  1180015 ggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttttctctcctcttctctcttcc 1179916  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactc 156  Q
    ||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||    
T  1179915 taatgcatggggtgtacaaggatatatgggaataaaggatgtctatctatcattactc 1179858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 9122229 - 9122367
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaa 118  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaa 9122328  T
Q  119 gggtgtatgggaataaag-gtgtctatgtatcattactc 156  Q
    | ||||||||||||||||  |||||||||||||||||||    
T  9122329 gagtgtatgggaataaagaatgtctatgtatcattactc 9122367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5957855 - 5957992
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  5957855 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcctctcctcttctctcttcc 5957954  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || |||||| |||||||||||||||||| |||||||||    
T  5957955 tagtgcatgaggtgtacaagggtgtatgagaataaagg 5957992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 8841507 - 8841354
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||| ||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  8841507 ggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctcttttcc 8841408  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || ||||||||||||||||| ||||||| ||||||| |||||||||||| ||||    
T  8841407 tagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacatt 8841354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37038504 - 37038641
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||||||||||||    
T  37038504 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcc 37038603  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || |||||||||||||||||||||||| | ||||||||    
T  37038604 tagtgcatggggtgtacaagggtgtatagaaataaagg 37038641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 43414654 - 43414503
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||||| |||| ||||||||||||||||||| ||| |||||| |||||  ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43414654 tggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttttctctcctcttctctcttccta 43414555  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||| ||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  43414554 atgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacatt 43414503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 10284701 - 10284553
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatg 104  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||  | || ||||||||||||||| ||    
T  10284701 caatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctttcctttcatcttctctcttcctagtg 10284602  T
Q  105 catggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||||||||||||||| |||||  |||| ||||||||||||||| ||||    
T  10284601 catggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatt 10284553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 15048256 - 15048119
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttttt--ctcctcttctctcttc 98  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||| |||  ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15048256 ggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctctttttatctcctcttctctcttc 15048158  T
Q  99 ctaatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    |||||| ||||| ||||||||||||||| ||||||||||    
T  15048157 ctaatgtatgggatgtacaagggtgtatcggaataaagg 15048119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 42710301 - 42710210
Alignment:
Q  69 cactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  42710301 cactttctcttttctctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcattactctt 42710210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 24307868 - 24307714
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  | ||||||||||||||||| ||||| | || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  24307868 ggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 24307769  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatta 153  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| |||||    
T  24307768 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 24307714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 4854938 - 4854785
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||||| ||| |||| ||||| | || | |||  |||||| |||||||||||||||||||||| |||||||||||||||| |    
T  4854938 ggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttctcttttctctcctcttctctcttac 4854839  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcatt 152  Q
    ||||| ||||| ||||||||||| |||| |||||||| ||||||||||| ||||    
T  4854838 taatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacatt 4854785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 16056460 - 16056323
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgta 115  Q
    ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  16056460 ttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaatacatggggtgta 16056361  T
Q  116 caagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||||||||||  | | ||||||||||||||| ||||    
T  16056360 caagggtgtatgcaattaaaaggtgtctatgtaacatt 16056323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 34307241 - 34307394
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   | |||||||||||| ||||||||||||| |||| ||||||||||||||    
T  34307241 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcc 34307340  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  34307341 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 10621162 - 10621059
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||||| |||   || ||||||||||||||||||||||||| ||||||||||||||||||    
T  10621162 ggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttttctctcctcttctctcttcc 10621063  T
Q  100 taat 103  Q
    ||||    
T  10621062 taat 10621059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 16383402 - 16383521
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  16383402 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 16383501  T
Q  100 taatgcatggggtgtacaag 119  Q
    |||| |||||||||||||||    
T  16383502 taatacatggggtgtacaag 16383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 30479549 - 30479395
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||| ||||| |||| ||||||| || |  |   ||||| |||||||| ||||||||||||| |||| ||||||||||||||    
T  30479549 ggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttctctttcttcttctcttctctcttcc 30479450  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatta 153  Q
    |||| |||| ||||||||||||||||||  | | ||||||||||||||| |||||    
T  30479449 taatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatta 30479395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42221540 - 42221677
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||| ||||||| || | ||||||||||||||| ||||||||||| |||   |||||||  |||||||||||||||||||  |||| |||||||||||||    
T  42221540 ggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctctttcatctcatcttctctcttcc 42221639  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
     |||  || |||||||||||||||||||  ||||||||    
T  42221640 aaatatatagggtgtacaagggtgtatgtaaataaagg 42221677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 32708028 - 32707925
Alignment:
Q  53 ggaccccgcacaag--cacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtat 148  Q
    ||||||||||||||  |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||  | | |||||||||||||||     
T  32708028 ggaccccgcacaagtacacactttctctttcttcttctcttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaa 32707929  T
Q  149 catt 152  Q
    ||||    
T  32707928 catt 32707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 42354600 - 42354510
Alignment:
Q  64 aagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    |||||||||||||||||  ||| |||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  42354600 aagcacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacatt 42354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32032750 - 32032902
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttc-tcctcttctctcttcc 99  Q
    |||||||||||| || |||||| |||||||||| ||||||| || | ||   ||| || ||||||| ||||||||||||| || | ||||||||||||||    
T  32032750 ggtggcaataca-tccttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctctttctccttctcttctctcttcc 32032848  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||| ||||||||||||||||||  | | ||||||||||||||| ||||    
T  32032849 taatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 32032902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25838222 - 25838351
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||| ||||||| ||||||||        ||||| |||||  |||| ||| ||||||||||||| |||||| ||||||||||||| || |    
T  25838222 ggtggcaatacactttttgacatccacacaa--------cacgttgtcacatggactccgtacaagcacactttttcttttctctcctcttctcttttgc 25838313  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||| || |||||||||||| ||||||| ||||||||    
T  25838314 taatgtatagggtgtacaaggttgtatggcaataaagg 25838351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 15258986 - 15258851
Alignment:
Q  19 gacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtaca 117  Q
    |||| ||||| |||| ||||||| || |||||| |||||| ||||||||||| |||||||||  ||||||||||||||||||||    || || ||||||    
T  15258986 gacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctcttcctagaatataggatgtaca 15258887  T
Q  118 agggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    |  |||||||| |||||| |||||||||||| ||||    
T  15258886 aaagtgtatggaaataaagggtgtctatgtaacatt 15258851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17443850 - 17443976
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||| |||||||||  || |||| ||||||||| ||||||| ||||||| | ||||||| |||||  |||||||||||||  ||| ||||||||||||||    
T  17443850 ggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctttcatcttctcttctctcttcc 17443949  T
Q  100 taatgcatggggtgtacaagggtgtat 126  Q
     | |||||| | ||||||||| |||||    
T  17443950 cagtgcatgagttgtacaaggatgtat 17443976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 20075009 - 20074902
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||||||||||||||||||||||||||| |||| | ||||||||        |||||| |||||||||||||||||||||  ||| ||||||||||||||    
T  20075009 ggtggcaatacactctttgacacccacataaaaatgtgacacgt--------ggaccctgcacaagcacactttctctttcctcttctcttctctcttcc 20074918  T
Q  100 taatgcatggggtgta 115  Q
    || | |||| ||||||    
T  20074917 tagttcatgaggtgta 20074902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14055667 - 14055532
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccg-cacaagcacactttctctttt-tctcctcttctctcttc 98  Q
    |||| |||||||||| |||||| |||||||||| ||| ||| ||||||||| |||||||  ||||||| |||||| |||||  |||  ||||||||||||    
T  14055667 ggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccctacacaagc-cactttttctttcctctgatcttctctcttc 14055569  T
Q  99 ctaatgcatggggtgtacaagggtgtatgggaataaa 135  Q
     ||||| ||| ||| ||||| |||||||| |||||||    
T  14055568 ttaatgaatgaggtatacaaaggtgtatgagaataaa 14055532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 40467783 - 40467878
Alignment:
Q  59 cgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||||||||||||||||||||  |||| ||||||||||||||| |  |||||||||||||   | |||||| || ||||||||||||||| ||||    
T  40467783 cgcacaagcacactttctctttcctctcatcttctctcttcctagtctatggggtgtacaaaaatttatggggataaaaggtgtctatgtaacatt 40467878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 30912496 - 30912537
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  30912496 gtggcaatacactcttt-acacccacacaaaattctgacacgt 30912537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 29705528 - 29705466
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaa 65  Q
    |||||||||||| |||| ||||||||||||||||||||||||| |  ||  |||||||||||||    
T  29705528 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 2547162 - 2547121
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  2547162 gtggcaatacacccttt-acacccacacaaaattctgacacgt 2547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 30183887 - 30183814
Alignment:
Q  64 aagcacactttctctttttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    |||||||||||||||||   || |||||| |||||| |||  |||||||||||||| |||||||  ||||||||    
T  30183887 aagcacactttctctttcattcatcttctttcttccaaatatatggggtgtacaagagtgtatgtaaataaagg 30183814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 41236372 - 41236530
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41236372 ggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 41236471  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41236472 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 41236530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 48183123 - 48182967
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcct 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  48183123 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttctt 48183024  T
Q  101 aatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  48183023 aatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 48182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6034069 - 6034226
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  6034069 ggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 6034168  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  6034169 taatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcattactc 6034226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11511537 - 11511380
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||     
T  11511537 ggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctcttctcttctctcttct 11511438  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaaggtgtctatgtatcattactct 157  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  11511437 taatgcatgaggtgtacaagggtgtatggaaataaatgtgtctatgtatcattactct 11511380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 42044442 - 42044281
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||  |||  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42044442 ggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 42044343  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttta 160  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  42044342 taatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcattactcttta 42044281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 24995180 - 24995024
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| |||||||||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||| ||    
T  24995180 tggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttttctctcctcttctctcttctta 24995081  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24995080 atgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcattactct 24995024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 50052503 - 50052350
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  50052503 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctcttcc 50052404  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || |||||  ||||||||| |||||||||||||||| |||||||||||| ||||    
T  50052403 tagtgcataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacatt 50052350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 480522 - 480388
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||    
T  480522 ggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcctcttctctcttcc 480423  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataa 134  Q
    ||||||||||||||||||| ||||||||| |||||    
T  480422 taatgcatggggtgtacaaaggtgtatggaaataa 480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 6 - 158
Target Start/End: Original strand, 23608265 - 23608419
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||| | || || ||||||||||||||||||||| |||||||||||||||||||||||    
T  23608265 caatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttttatctcctcttctctcttcctaatg 23608364  T
Q  105 catggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactctt 158  Q
    |||| |||||||| || |||||||||||||||| |||||||||||||||||||||    
T  23608365 catgaggtgtacagggatgtatgggaataaaggatgtctatgtatcattactctt 23608419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 54473608 - 54473453
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  54473608 ggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttttctctcctcttctctcttcc 54473509  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattac 154  Q
    |||| ||||| ||||||||||||||||||||||||| |||||  ||||||||||||    
T  54473508 taatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcattac 54473453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 29239911 - 29240064
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||||||||||||  ||||||| |||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  29239911 ggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctctttcctctcctcttctctcttcc 29240010  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || ||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  29240011 tagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacatt 29240064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31910217 - 31910370
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||| |||  ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  31910217 ggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctcttttctctcatcttctctcttcc 31910316  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| ||||| |||||||| ||||||||||||||| |||||||||||| ||||    
T  31910317 taatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatt 31910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 41823921 - 41824060
Alignment:
Q  15 ctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtg 113  Q
    |||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||    
T  41823921 ctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatgaggtg 41824020  T
Q  114 tacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||| ||||||| |||||||||||| ||||    
T  41824021 tacaaaggtgtatgagaataaatggtgtctatgtaacatt 41824060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 29234318 - 29234205
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| |||||| |||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29234318 tggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttccta 29234219  T
Q  102 atgcatggggtgta 115  Q
    ||||||||||||||    
T  29234218 atgcatggggtgta 29234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50526246 - 50526109
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||| |||  |||||||||||| |||||| |||  ||||||||||||||||||    
T  50526246 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcctctcctcttctctcttcc 50526147  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || |||||||||||||||||||||||| | ||||||||    
T  50526146 tagtgcatggggtgtacaagggtgtatagaaataaagg 50526109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 40574804 - 40574949
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||  |  ||  ||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  40574804 ggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctcttttctctcctcttctctcttcc 40574903  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctat 144  Q
    ||||  |||||||||||||||||||||| |||| ||||||||||||    
T  40574904 taatatatggggtgtacaagggtgtatgagaataaaaggtgtctat 40574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 19670791 - 19670638
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  19670791 ggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 19670692  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  19670691 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 19670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 55475216 - 55475369
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||| || | ||   |||||| ||| ||| ||||||||||||| |||| ||||||||||||||    
T  55475216 ggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctctttcttcttctcttctctcttcc 55475315  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  55475316 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 55475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 53352637 - 53352492
Alignment:
Q  5 gcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaat 103  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||| | | |||||||||||||||| |||||||||||| ||||||||||||||||||||      
T  53352637 gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttttctctcctcttctctcttccta-- 53352540  T
Q  104 gcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
          ||||||||||||||||||  |||||| |||||||||||||||||||||    
T  53352539 ------ggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactc 53352492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3481679 - 3481794
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| ||||||||||||||||||||  || | ||||||||||| |    
T  3481679 ggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctctttcctcccatcttctctctttc 3481778  T
Q  100 taatgcatggggtgta 115  Q
    || ||||| |||||||    
T  3481779 tagtgcatagggtgta 3481794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17983818 - 17983691
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  17983818 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 17983719  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||| ||||||||||||||||||    
T  17983718 taatacatgaggtgtacaagggtgtatg 17983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 47986233 - 47986385
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  | |||||| |||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| || | ||||||||||||||    
T  47986233 ggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttattctcttctctcttcc 47986332  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaaggtgtctatgtatcatt 152  Q
    |||| |||||| ||||||||||||||||  | |||||||||||||||| ||||    
T  47986333 taatacatgggatgtacaagggtgtatgcaattaaaggtgtctatgtaacatt 47986385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29977910 - 29978045
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | || |||||||||||||| |||||||||||||||   ||||||| ||||||||||||||||||||  ||| ||||| |||||  |    
T  29977910 ggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctcttttctctcac 29978009  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| |||||||||||||| |||||| ||||||||    
T  29978010 taatgtatggggtgtacaagtgtgtataggaataaa 29978045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 50813967 - 50813814
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||| ||||||| | ||||||||||||||||| ||||||| || ||||   | |||||||||||| ||||||||||||| |||| ||||||||||||||    
T  50813967 ggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctctttcttcttctcttctctcttcc 50813868  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||| | ||||||||||||||||  | | ||||||||||||||| ||||    
T  50813867 taatacatgagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 50813814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29548034 - 29547881
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  | ||||||||||||||||| ||||||| || | ||   ||| |||||| ||| ||||||| ||||| |||| ||||||||||||||    
T  29548034 ggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctttcttcttctcttctctcttcc 29547935  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  29547934 taatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 29547881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 29589811 - 29589667
Alignment:
Q  5 gcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaat 103  Q
    ||||||||| | ||||||||||||||||| ||||| | || | ||   ||||||| |||||| ||||||||||||| |||| ||||||||||||||||||    
T  29589811 gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttcttctcttctctcttcctaat 29589712  T
Q  104 gcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgta 147  Q
     |||| |||||||||| |||||||  | | |||||||||||||||    
T  29589711 acatgaggtgtacaagagtgtatgcaattaaaaggtgtctatgta 29589667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28480343 - 28480217
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttct-ctttttctcctcttctctcttcc 99  Q
    |||| |||||||||  || |||| ||||||||| ||||||| ||||||| | ||||||| ||||| |||||||||| |||  ||||||||||||||||||    
T  28480343 ggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcc 28480244  T
Q  100 taatgcatggggtgtacaagggtgtat 126  Q
    || |||||| | ||||||||| |||||    
T  28480243 tagtgcatgagttgtacaaggatgtat 28480217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28481218 - 28481092
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttct-ctttttctcctcttctctcttcc 99  Q
    |||| |||||||||  || |||| ||||||||| ||||||| ||||||| | ||||||| ||||| |||||||||| |||  ||||||||||||||||||    
T  28481218 ggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcc 28481119  T
Q  100 taatgcatggggtgtacaagggtgtat 126  Q
    || |||||| | ||||||||| |||||    
T  28481118 tagtgcatgagttgtacaaggatgtat 28481092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28482093 - 28481967
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttct-ctttttctcctcttctctcttcc 99  Q
    |||| |||||||||  || |||| ||||||||| ||||||| ||||||| | ||||||| ||||| |||||||||| |||  ||||||||||||||||||    
T  28482093 ggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctcttcc 28481994  T
Q  100 taatgcatggggtgtacaagggtgtat 126  Q
    || |||||| | ||||||||| |||||    
T  28481993 tagtgcatgagttgtacaaggatgtat 28481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32766983 - 32767110
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||||||||| |||||| ||||||| || | ||   |||||| ||||||| ||||||||||||| |||| ||| |||||||| |    
T  32766983 ggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttctctttcttcttctcctctctctttc 32767082  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| ||| | |||||||||||||||||    
T  32767083 taatacatagagtgtacaagggtgtatg 32767110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18924570 - 18924417
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | |||| | |||||||||| ||||||| || |  |   | || ||||||||| ||||||||||||| |||| ||||||||||||||    
T  18924570 ggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttctctttcttcttctcttctctcttcc 18924471  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||| |||||| |||||||||||  | | ||||||||||||||| ||||    
T  18924470 taatacatgaggtgtaaaagggtgtatgcaattaaaaggtgtctatgtaacatt 18924417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 48647782 - 48647694
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcat 107  Q
    ||||||||| |||| ||| |||||| |||||| |||| ||||||||||||| |||||||||  |||||||||||||||||||| |||||    
T  48647782 acacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcctcttctctcttcctagtgcat 48647694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44536820 - 44536702
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||| |||| |||||||||| ||||||| || ||||    |||||| || ||| ||||||||||||| |||| ||||||||||||||    
T  44536820 ggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttctctttcttcttctcttctctcttcc 44536722  T
Q  100 taatgcatggggtgtacaag 119  Q
    |||| ||| |||||||||||    
T  44536721 taatacatagggtgtacaag 44536702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 47104574 - 47104685
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    ||||||||||| |||||||||||||||| | |||||||| ||      |||||| ||||| ||||||||||||||  ||||||||||||||||| |||||    
T  47104574 caatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctcttctctcttcttaatg 47104673  T
Q  105 catggggtgtac 116  Q
    |||| |||||||    
T  47104674 catgaggtgtac 47104685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8343238 - 8343123
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  |||||||||| ||| |||| ||||||| || | ||   |||||||||| ||| | ||||||||||| |||| ||||||||||||||    
T  8343238 ggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttctctttcttcttctcttctctcttcc 8343139  T
Q  100 taatgcatggggtgta 115  Q
    |||| ||||| |||||    
T  8343138 taatacatggagtgta 8343123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 56300225 - 56300104
Alignment:
Q  16 tttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgt 114  Q
    ||||||| |||||||||| ||||||| || ||||   | | || |||||| ||||||||||||||  |||||||||||||||| |||||| ||| | |||    
T  56300225 tttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctctttctaatgtatgagatgt 56300126  T
Q  115 acaagggtgtatgggaataaag 136  Q
    |||||  |||||| ||||||||    
T  56300125 acaagattgtatgagaataaag 56300104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 55079789 - 55079673
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccg-cacaagcacactttctcttt-ttctcctcttctctcttc 98  Q
    |||||||||||||   |||||||||| |||||| ||||||| || | ||   |||||||  |||||| ||||||||||||| |||| |||||||||||||    
T  55079789 ggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctctttcttcttctcttctctcttc 55079690  T
Q  99 ctaatgcatggggtgta 115  Q
    ||||| ||||| |||||    
T  55079689 ctaatacatggtgtgta 55079673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 33703306 - 33703266
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  33703306 tggcaatacacccttt-acacccacacaaaattctgacacgt 33703266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27564810 - 27564652
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27564810 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 27564711  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27564710 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactct 27564652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9474951 - 9474792
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  9474951 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctcttcc 9474852  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcattactctt 158  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9474851 taatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcattactctt 9474792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 48716357 - 48716200
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||    
T  48716357 ggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcc 48716258  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48716257 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattactc 48716200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 37649223 - 37649379
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||| | |  |||||||||||||||||| ||||| ||||||||||||||||||    
T  37649223 ggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttttctctcctcttctctcttcc 37649322  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattact 155  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37649323 taatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcattact 37649379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 156
Target Start/End: Original strand, 41758832 - 41758987
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctcctcttctctcttccta 41758931  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  41758932 atgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcattactc 41758987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 47452395 - 47452238
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  47452395 ggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 47452296  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaag-gtgtctatgtatcattactc 156  Q
    || |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  47452295 tattgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcattactc 47452238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2581940 - 2582098
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2581940 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttttctctcctcttctctcttcc 2582039  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    |||| |||| |||||||||||||||||  ||||||| ||||| ||||||||||||||||    
T  2582040 taatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcattactct 2582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 38595179 - 38595337
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  38595179 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcc 38595278  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactct 157  Q
    ||||  ||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  38595279 taatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactct 38595337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3000344 - 3000501
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  3000344 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctcttcc 3000443  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactc 156  Q
    ||||  ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  3000444 taatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcattactc 3000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 32813272 - 32813425
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| |||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32813272 ggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 32813371  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  32813372 taatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatt 32813425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38632396 - 38632259
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||| ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  38632396 ggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttttctctcctcttctctcttcc 38632297  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38632296 taatgcatggggtgtacaagggtgtatgggaataaagg 38632259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 50630483 - 50630636
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||  |||||  |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50630483 ggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 50630582  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||    
T  50630583 taatgcatagggtgtacaagggtgtatgagaataaatggtgtctatgcatcatt 50630636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 43162 - 43315
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  43162 caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttctctcctcctctctctttctaatg 43261  T
Q  105 catggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||    
T  43262 catggggtgtacaagagtgtataagaataaagggtatctatgtatcattactct 43315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 51898758 - 51898621
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||  ||||||||||||||||||    
T  51898758 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctcttcc 51898659  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || |||||||||||||||||||||||| | ||||||||    
T  51898658 tagtgcatggggtgtacaagggtgtatagaaataaagg 51898621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8346463 - 8346305
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctc-ttctctcttc 98  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| || |||||||    
T  8346463 ggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttttctctcctctttttctcttc 8346364  T
Q  99 ctaatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||| |||||||| |||||||| ||||||| ||| | |||||||||||||||    
T  8346363 ctaatgcatggagtgtacaaaggtgtatgagaataaatggtatttatgtatcattactc 8346305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 44548451 - 44548301
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  44548451 ggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcttcttctctcttcc 44548352  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactctt 158  Q
    |||||||||         | ||||||||||||| ||| ||||||||||||||||||||||    
T  44548351 taatgcatg---------acggtgtatgggaataaaatgtgtctatgtatcattactctt 44548301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45044635 - 45044500
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  ||||||||||| |||||| ||||||| |||| |||  ||||||||||||| |||| |||||||||| ||| ||||||||||||||    
T  45044635 ggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctcttctcttctctcttcc 45044536  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| |||||||||||||||||||||| |||||||    
T  45044535 taatgtatggggtgtacaagggtgtatgagaataaa 45044500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 49811602 - 49811449
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||||  ||||||| |||||||||| |||||||||||| ||    ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  49811602 ggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctcttttctctcctcttctctcttcc 49811503  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| ||| |||| ||||||||||||| ||||||| |||||||||||| ||||    
T  49811502 taatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatt 49811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 26274458 - 26274612
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttccta 101  Q
    |||||||||||   ||||||| ||||| |||| |||||||| |||||||| ||| || ||||||| ||||||| |||||| ||| |||||||||||||||    
T  26274458 gtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttctttt-ctc-tcttctctcttccta 26274555  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactct 157  Q
    ||||||| | || ||||||||||||||||||||| ||||||||||||||||||||||    
T  26274556 atgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcattactct 26274612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 13414791 - 13414910
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||| |||||||||| | || ||||||||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttctatcatcttctctcttcctaatg 13414890  T
Q  105 catggggtgtacaagggtgt 124  Q
    ||||| |||||| |||||||    
T  13414891 catggagtgtactagggtgt 13414910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 50591075 - 50590948
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  50591075 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 50590976  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| |||||||||||||||||||||||    
T  50590975 taatacatggggtgtacaagggtgtatg 50590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 5959074 - 5958948
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcct 100  Q
    ||||||||||||   ||||||||||||||||| ||||||| || ||||   |||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  5959074 gtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcct 5958975  T
Q  101 aatgcatggggtgtacaagggtgtatg 127  Q
    ||| |||||||||||||||||||||||    
T  5958974 aatacatggggtgtacaagggtgtatg 5958948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 11152453 - 11152308
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||| |||| |||||||||| ||||||||||||||| |  |||||||||||||||| |||||| |||  ||||||||||||||||||    
T  11152453 ggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctcctcttctctcttcc 11152354  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctat 144  Q
     | ||||||||||||| |||| |||||| ||||||| |||||||||    
T  11152353 cagtgcatggggtgtagaaggatgtatgagaataaatggtgtctat 11152308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37926513 - 37926368
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||   ||| ||||||||| |||| |||||||||| | |||  ||| |||| ||||| |||||||||||||| ||| ||||||||||||||    
T  37926513 ggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctcttttctcttctcttctctcttcc 37926414  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctat 144  Q
    ||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  37926413 taatgtatggggtgtacaaggatgtatgtgaataaatggtgtctat 37926368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 41608568 - 41608441
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| || | ||   |||||||| ||||| ||||||||||||| |||| ||||||||||||||    
T  41608568 ggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctctttcttcttctcttctctcttcc 41608469  T
Q  100 taatgcatggggtgtacaagggtgtatg 127  Q
    |||| ||| |||||||||||||||||||    
T  41608468 taatacatagggtgtacaagggtgtatg 41608441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23597166 - 23597031
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||||||||| ||||||| |||| |||||||||| | ||||  ||||  |||||| |||||||| |||||| |||||| |||||| ||||    
T  23597166 ggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacactttatcttttctctcctattctctattcc 23597067  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    || | |||| ||||| ||||| |||||| |||||||    
T  23597066 tagttcatgaggtgtccaaggatgtatgagaataaa 23597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 47748468 - 47748620
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| ||| |||||||| | |||| ||||||| || | ||   ||| |||||||||| | ||||||||||| |||| ||||||||||||||    
T  47748468 ggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttctctttcttcttctcttctctcttcc 47748566  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| ||||||||||||||| |||||||  | | ||||||||||||||| ||||    
T  47748567 taatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgtaacatt 47748620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 3302590 - 3302471
Alignment:
Q  19 gacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtaca 117  Q
    ||||||||||||||| ||||||||||| |||   |||||||  ||||||||||||||| |||  |||| ||||||||||||| |||  || |||||||||    
T  3302590 gacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctttttcatctcatcttctctcttccaaatatatagggtgtaca 3302491  T
Q  118 agggtgtatgggaataaagg 137  Q
    ||||||||||  ||||||||    
T  3302490 agggtgtatgttaataaagg 3302471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 44454020 - 44454116
Alignment:
Q  17 ttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggt 112  Q
    |||| |||||||||||| ||||||| || || ||| ||| ||| |||||||||||||| |||||  |||| ||||||||||||||||||||||||||    
T  44454020 ttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttcctctcatcttctctcttcctaatgcatggggt 44454116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 26440764 - 26440886
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcctaatgc 105  Q
    |||||||| |||| |||||||||||||| |||||||||| | |||  ||| |||||| ||||||||||||||||         |||||||||| |||||     
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctctt---------ttctctcttcgtaatgt 26440854  T
Q  106 atggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||  ||||||||||||||| ||||||||||    
T  26440855 atggaatgtacaagggtgtataggaataaagg 26440886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 44332394 - 44332319
Alignment:
Q  53 ggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaagggtgtatg 127  Q
    |||||||||||||| | ||||||||||| |||| |||||||||||||||||| ||| | |||||||||||||||||    
T  44332394 ggaccccgcacaagtatactttctctttcttcttctcttctctcttcctaatacatagagtgtacaagggtgtatg 44332319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 6260914 - 6261048
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgcatggggtgtacaa 118  Q
    ||||||||| |||| ||| ||| || |||||| |||||||||| ||||||| ||||| ||| ||||||||||||||||| ||| |  || ||||||||||    
T  6260914 acacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctatttcttctcctcttctctctttctagtatatagggtgtacaa 6261013  T
Q  119 gggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
     ||||||||  |||||| ||||| |||||| ||||    
T  6261014 aggtgtatgaaaataaatggtgtgtatgtaacatt 6261048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 48489343 - 48489426
Alignment:
Q  19 gacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||| |||||||||| ||||||| || |||||| ||| |||||||||||||| ||||| |||| || |||||||||||||||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttctattttctcacctcttctctcttccta 48489426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 9501643 - 9501586
Alignment:
Q  92 tctcttcctaatgcatggggtgtacaagggtgtatgggaataaaggtgtctatgtatc 149  Q
    ||||||| |||||||||| ||||||||||||||||| |||||| | | ||||||||||    
T  9501643 tctcttcttaatgcatggcgtgtacaagggtgtatgtgaataaggatatctatgtatc 9501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 750239 - 750301
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaa 65  Q
    |||||||||||| |||| ||||||||||||||||||||||||| || ||  ||||||| |||||    
T  750239 gtggcaatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccccacacaa 750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 4401494 - 4401453
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  4401494 gtggcaatacacccttt-acacccacacaaaattctgacacgt 4401453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 7447991 - 7447950
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  7447991 gtggcaatacacccttt-acacccacacaaaattctgacacgt 7447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 24769433 - 24769474
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  24769433 gtggcaatacactcttt-acatccacacaaaattctgacacgt 24769474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44334245 - 44334175
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacac 71  Q
    ||||| ||||||| | |||||| ||||||||||  |||||||||||||||  |||||| |||||| |||||    
T  44334245 ggtggtaatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 50448194 - 50448235
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  50448194 gtggcaatacacccttt-acacccacacaaaattctgacacgt 50448235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2740299 - 2740458
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||    
T  2740299 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctccccttctctcttcc 2740398  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  2740399 taatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcattactctt 2740458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 18520959 - 18520800
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18520959 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctcttcc 18520860  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactctt 158  Q
    ||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  18520859 taatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcattactctt 18520800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 14831839 - 14831996
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttc-tctttttctcctcttctctcttcc 99  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  14831839 ggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttcttttttttctcctcttctctcttcc 14831938  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14831939 taatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcattactc 14831996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 33149713 - 33149553
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  33149713 ggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcc 33149614  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  33149613 taatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcattactcttt 33149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 40145432 - 40145592
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40145432 ggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 40145531  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    ||||||| | ||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  40145532 taatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcattactcttt 40145592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35785224 - 35785381
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||||| |||| |||||||||||||    
T  35785224 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttttctctcatcttctctcttcc 35785323  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcattactc 156  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  35785324 taatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcattactc 35785381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 36733013 - 36732880
Alignment:
Q  5 gcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaat 103  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36733013 gcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaat 36732914  T
Q  104 gcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||| ||||||||||||||||||||||||||||    
T  36732913 gcatgaggtgtacaagggtgtatgggaataaagg 36732880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13811677 - 13811826
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctt-tttctcctcttctctcttcc 99  Q
    ||||||||||||   |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  13811677 ggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctctctcctcttctctcttcc 13811776  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtat 148  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  13811777 taatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgtat 13811826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 15409685 - 15409548
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| ||||||| |||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  15409685 ggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctcttttctctcctcttctctcttcc 15409586  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  15409585 taatgtatggggtgtacaagggtgtatgcgaataaagg 15409548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 6679723 - 6679876
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||||||||||||  |||||||||||||||||| |||||||||| |||||  ||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  6679723 ggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctcttttctctcctcttctctcttcc 6679822  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    ||||| || |||||||||||||||||||  |||||| | |||||||||| ||||    
T  6679823 taatgtatagggtgtacaagggtgtatgacaataaatgatgtctatgtaacatt 6679876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 31009013 - 31009166
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    |||| ||||||| ||||  |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||  ||| ||||||||||||||    
T  31009013 ggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctcttctcttctctcttcc 31009112  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || |||||||||||||||| |||||||| ||||||| |||||||||||| ||||    
T  31009113 tagtgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatt 31009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 35943967 - 35943814
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||   |||||||||||||||||| ||||||||||||| ||| ||| ||| ||||||||||||||||||||  ||||||||| ||||||||    
T  35943967 ggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctttcctctcctcttttctcttcc 35943868  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    || |||||||||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  35943867 tagtgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatt 35943814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28177800 - 28177914
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  28177800 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctcttttctctcctcttccctcttcc 28177899  T
Q  100 taatgcatggggtgt 114  Q
    ||||| |||||||||    
T  28177900 taatgtatggggtgt 28177914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26720541 - 26720676
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||||| ||| |||| |||||||||| | |||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  26720541 ggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcc 26720640  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| ||||||||||| |||||||||| |||||||    
T  26720641 taatgtatggggtgtactagggtgtatgagaataaa 26720676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26990290 - 26990425
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||||| ||| |||| |||||||||| | |||  ||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  26990290 ggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctcttcc 26990389  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    ||||| ||||||||||| |||||||||| |||||||    
T  26990390 taatgtatggggtgtactagggtgtatgagaataaa 26990425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 42414377 - 42414275
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||| | ||||||||||||||||    
T  42414377 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttttctttcctcttctctcttcc 42414278  T
Q  100 taa 102  Q
    |||    
T  42414277 taa 42414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 2252243 - 2252090
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  2252243 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 2252144  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  2252143 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 2252090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 3921340 - 3921187
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || | ||   |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  3921340 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcc 3921241  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||||  ||||||||||||||||||||||  | | ||||||||||||||| ||||    
T  3921240 taatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 3921187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 33825399 - 33825246
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||  ||| | | |||   ||||||||||||||||||||| ||| ||||||||||||||    
T  33825399 ggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttttatcttctcttctctcttcc 33825300  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
    || ||||||||||||| |||| |||||| ||||||| |||||| ||||| ||||    
T  33825299 tagtgcatggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacatt 33825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36875678 - 36875564
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttttt-ctcctcttctctcttcc 99  Q
    ||||||||||||| ||||||||||||||||||| |         ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  36875678 ggtggcaatacaccctttgacacccacacaaaaat---------agtcacgtggatcccgcacaagcacactttctcttttttctcctcttctctcttcc 36875588  T
Q  100 taatgcatggggtgtacaagggtg 123  Q
    |||| |||||||||||||||||||    
T  36875587 taatacatggggtgtacaagggtg 36875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 31132392 - 31132516
Alignment:
Q  24 ccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttcctaatgcatggggtgtacaagggtg 123  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||| ||||| ||||||         ||||||| |||||||||| ||||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttctttt---------ctctctttctaatgcatgaggtgtacaagggtg 31132482  T
Q  124 tatgggaataaa-ggtgtctatgtatcattactc 156  Q
    ||||  |||||| ||||| |||||||||||||||    
T  31132483 tatgaaaataaagggtgtttatgtatcattactc 31132516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 6260076 - 6259939
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    |||| |||||||| |||| |||||||| ||||| ||| |||| | |||||  ||||| | || |||||||||||||||||  |||||||||||||||  |    
T  6260076 ggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttctctttcatctcctcttctctctcac 6259977  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    ||||| ||||| |||||||| |||||| ||||||||||    
T  6259976 taatgtatgggatgtacaagtgtgtataggaataaagg 6259939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 135
Target Start/End: Complemental strand, 39557569 - 39557457
Alignment:
Q  24 ccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggt 122  Q
    |||||||||| ||||||||||  ||||  |||||||  |||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||| || |    
T  39557569 ccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctctcttcctaatacatgaggtgtacatggat 39557470  T
Q  123 gtatgggaataaa 135  Q
     |||| |||||||    
T  39557469 ctatgagaataaa 39557457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 39688971 - 39688819
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcct 100  Q
    |||||||||||  | ||||||||||||||||| ||||| | || ||||   | |||||||| ||| ||||||||||||| ||||  ||||||||||||||    
T  39688971 gtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctctttcttcttttcttctctcttcct 39688872  T
Q  101 aatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    ||| ||| |||||||||| ||||||||  | | ||||||||||||||| ||||    
T  39688871 aatacatagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacatt 39688819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 2177436 - 2177524
Alignment:
Q  48 cacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaa 135  Q
    |||| ||| ||| |||||||||| |||||||||  |||||||||||||||||||| ||||| || |||||||||||||||| |||||||    
T  2177436 cacgtggatcccacacaagcacattttctctttcctctcctcttctctcttcctagtgcattggatgtacaagggtgtatgagaataaa 2177524  T

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Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 20073586 - 20073456
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatg 104  Q
    |||||||| ||||||||| |||| |||| |||  |||||   |||| |||||| ||||||||||||||||| |||  |||||||||||||||||||| |     
T  20073586 caatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttctatttcctctcctcttctctcttcctagtt 20073487  T
Q  105 catggggtgtacaagggtgtatgggaataaa 135  Q
    |||| | | ||||| |||||||| |||||||    
T  20073486 catgagatttacaaaggtgtatgagaataaa 20073456  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 9603844 - 9603991
Alignment:
Q  7 aatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcctaatgc 105  Q
    ||||||||| || ||||| |||||||| |||||||| | ||||   |||||||  |||| ||||||||||||||  | || |||||||||||| || |||    
T  9603844 aatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcatttcgtcttctctcttcttagtgc 9603943  T
Q  106 atggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcatt 152  Q
     |||| ||||||| |||||||| ||||||| |||||||| ||| ||||    
T  9603944 ttgggatgtacaaaggtgtatgagaataaatggtgtctacgtaacatt 9603991  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 21370048 - 21370130
Alignment:
Q  20 acacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttccta 101  Q
    |||||||| ||||| ||||||| || |||||| ||||||||||||| |||| |||||||||  |||| |||||| ||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctcatcttctttcttccta 21370130  T

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Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 33801635 - 33801594
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  33801635 gtggcaatacactcttt-acacccacacaaaattctgacacgt 33801594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 16115296 - 16115247
Alignment:
Q  111 gtgtacaagggtgtatgggaataaagg-tgtctatgtatcattactcttt 159  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||||    
T  16115296 gtgtacaagagtgtatgagaataaagggtgtctatgtatcattactcttt 16115247  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 16327926 - 16328041
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||  | |||||||||||| |||| ||||||||||  ||| | | ||| | |||||||||||||| |||||  | | ||||||||||| ||    
T  16327926 ggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcattttctcttctctctccc 16328025  T
Q  100 taatgcatggggtgta 115  Q
    ||||  ||||||||||    
T  16328026 taatatatggggtgta 16328041  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 38296249 - 38296352
Alignment:
Q  22 acccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctc-tttttctcctcttctctcttcctaatgcatggggtgtacaagg 120  Q
    |||||||||||| || |||||||||  ||| ||| ||  ||||||||||||||||| ||  ||||||||||| ||||| || | ||||||||||| || |    
T  38296249 acccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttctcattcatctcctcttctttcttcttactacatggggtgtataaag 38296348  T
Q  121 gtgt 124  Q
    ||||    
T  38296349 gtgt 38296352  T

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Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 41470462 - 41470425
Alignment:
Q  30 aaaattctgacacgtagtcacgcggaccccgcacaagc 67  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  41470462 aaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 4056 - 4214
Alignment:
Q  3 tggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttccta 101  Q
    |||||||||||  ||| |||||||||||||| ||||||||||||| ||| ||| |||||| |||||||||||||||||| ||| ||||||||||||||||    
T  4056 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttccta 4155  T
Q  102 atgcatggggtgtacaagggtgtatgggaataaa-ggtgtctatgtatcattactcttt 159  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4156 atgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcattactcttt 4214  T

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Target: scaffold0321 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 10184 - 10025
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||  |||||||| ||||| |||| ||||||||||||||||| ||||| || |||||||||||||||||||| ||||||||||||||||||    
T  10184 ggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctcttttctctcctcttctctcttcc 10085  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataa-aggtgtctatgtatcattactctt 158  Q
    |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  10084 taatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcattactctt 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1004 - 867
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||| ||||||||||  |||||||||||||||| | | ||||||||||||||||||||||||  ||||||||||||||||||    
T  1004 ggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcc 905  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || ||||||||||||||||| |||||||||||||||||    
T  904 tagtgcatggggtgtacaagagtgtatgggaataaagg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1004 - 867
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcc 99  Q
    ||||||||||||| |||| ||| ||||||||||  |||||||||||||||| | | ||||||||||||||||||||||||  ||||||||||||||||||    
T  1004 ggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctcttcc 905  T
Q  100 taatgcatggggtgtacaagggtgtatgggaataaagg 137  Q
    || ||||||||||||||||| |||||||||||||||||    
T  904 tagtgcatggggtgtacaagagtgtatgggaataaagg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 152523 - 152676
Alignment:
Q  1 ggtggcaatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctcttt-ttctcctcttctctcttcc 99  Q
    ||||||||||||| | ||||||||||||||||| ||||||| || ||||   ||| |||||||||  ||||||||||||| |||| |||||||||||| |    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctcttctctctttc 152622  T
Q  100 taatgcatggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
    |||| |||||| ||||||||||||||||  | | ||||||||||||||| ||||    
T  152623 taatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 152676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 8933 - 8785
Alignment:
Q  6 caatacactctttgacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttt-tctcctcttctctcttcctaatg 104  Q
    ||||||||| ||||||| | |||||||| | |||||| |||||||| ||||||| |||||| ||| |||||||||  || | |||||||||||||||||     
T  8933 caatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttctctttcctcccatcttctctcttcctaata 8834  T
Q  105 catggggtgtacaagggtgtatgggaat-aaaggtgtctatgtatcatt 152  Q
     |||||||||||||||||||||  |||| ||||||||||||||| ||||    
T  8833 tatggggtgtacaagggtgtataagaataaaaggtgtctatgtaacatt 8785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17097 - 17175
Alignment:
Q  19 gacacccacacaaaattctgacacgtagtcacgcggaccccgcacaagcacactttctctttttctcctcttctctcttccta 101  Q
    |||| |||||||||| ||||||| || |||||  |||||||||||||||||| ||||||||    ||||||||||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctt----tcctcttctctcttccta 17175  T

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Target: scaffold0119 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 851 - 810
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgt 44  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  851 gtggcaatacacccttt-acacccacacaaaattctgacacgt 810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 11417 - 11374
Alignment:
Q  2 gtggcaatacactctttgacacccacacaaaattctgacacgtag 46  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||    
T  11417 gtggcaatacactattt-acacctacacaaaattctgacacgtag 11374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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