View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1031_low_7 (Length: 329)
Name: NF1031_low_7
Description: NF1031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1031_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 29618517 - 29618741
Alignment:
| Q |
95 |
agaaacagaagagagggaggaaaatgtagaaccagaaccaaacaacccggaaaatgagaatgaagaagaatgcaacgctgtggtggtggtggaggagatc |
194 |
Q |
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| T |
29618517 |
agaaacagaagagagggaggaaaatgtagaaccagaaccaaacaacccggaaaatgagaatgaagaagaatgcaacgctgtggtggtggtggaggagatc |
29618616 |
T |
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| Q |
195 |
caaggactcatcgaatcggtggttcaattcggtgaatacagaagaacacaaaggaaagaatcacacaacctcgctcgtcgtttcaaacacatgttgcctc |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29618617 |
caaggactcatcgaatcggtggttcaattcggtgaatacagaagaacacaaaggaaagaatcacacaacctcgctcgtcgtttcaaacacatgttgcctc |
29618716 |
T |
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| Q |
295 |
ttatggaagaccttcgtgacctttg |
319 |
Q |
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| T |
29618717 |
ttatggaagaccttcgtgacctttg |
29618741 |
T |
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