View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10320_high_6 (Length: 290)
Name: NF10320_high_6
Description: NF10320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10320_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 38742464 - 38742202
Alignment:
| Q |
12 |
taatgacaatgaagacacactccacttataaggactgacctaaacgaaaacaactattttcttttttaaaagaaagataaaagaaaactatgggctattt |
111 |
Q |
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| T |
38742464 |
taatgataatgaagacacactccacttataaggactgacctaaacgaaaacaactattttcttttttaaaagaaagataaaagaaaactatgggctattt |
38742365 |
T |
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| Q |
112 |
tatcttccacccaatttactatcagatgtggtatccacataaaaacaactttttccacccaataactttaactattttcatgctttatattacattttta |
211 |
Q |
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| T |
38742364 |
tatcttccacccaatttactatcagatgtggtatccacataaaaacaactttttccacccaataactttaactattttcatgctttatattacattttta |
38742265 |
T |
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| Q |
212 |
tgttggatttacaagaacttcaatacaatttggacaaaaaagtggacgatctaatggaaaaat |
274 |
Q |
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| T |
38742264 |
tgttggatttacaagaacttcaatacaatttggacaaaaaagtggacgatctaatggaaaaat |
38742202 |
T |
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