View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10320_low_18 (Length: 250)
Name: NF10320_low_18
Description: NF10320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10320_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 43183874 - 43184086
Alignment:
| Q |
1 |
ctgagagtactgcaaa-gcttccccctcatgaactaacagtttcggagtcacgaacaaaagctttcccacccagcaaaagctgtaacaaactgtctgaag |
99 |
Q |
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| T |
43183874 |
ctgagagtactgcaaaagcttccccctcatgaactaacagtttcggagtcacgaataaaagctttccaacccagcaaaagctgtaacaaactgtctgaag |
43183973 |
T |
|
| Q |
100 |
gagtcacgaatgaagcacctgaaacctgtctttgttagcagactgctaaagcttgcattcacattacatttcagaacacctataggcggacgacaccact |
199 |
Q |
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|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
43183974 |
gagtcacgaacgaagcacctgaagcctgtctttgttagcagactgctaaagcttgcattcacattacatttcagaacacctataggcagacgacaccact |
43184073 |
T |
|
| Q |
200 |
gaattctgcaatg |
212 |
Q |
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||||||| ||||| |
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| T |
43184074 |
gaattctacaatg |
43184086 |
T |
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