View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10321_high_3 (Length: 208)
Name: NF10321_high_3
Description: NF10321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10321_high_3 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 5396697 - 5396529
Alignment:
| Q |
19 |
acacagcagcaaaaacgttcataccagaaaataacttagaattgaaatgtgactacattgttgaaatttaaagaaaaataagcatggaagatacacttat |
118 |
Q |
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| T |
5396697 |
acacagcagcaaaaacgttcacaccagaaaataacttagaattgaaatgtgactacattgttgaaatttaaagaaaaataagcatggaagatacacttat |
5396598 |
T |
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| Q |
119 |
atttttatagcttgaattcgttttcagttgacgattagggttcaaaatgtaagtattcaaccttgttta |
187 |
Q |
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||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
5396597 |
attcttatagcttgaattcgttttcagttgatgattagggttcaaaatgtaagtattcaaccttgttta |
5396529 |
T |
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