View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10321_low_1 (Length: 409)
Name: NF10321_low_1
Description: NF10321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10321_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 14 - 390
Target Start/End: Original strand, 15908127 - 15908503
Alignment:
| Q |
14 |
cagtttctagtaatagtggatgaagaccacagtaatggtcctagttttgtgacagacacacataaatgcctgcatataatgttcattcatcatcaaagtt |
113 |
Q |
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| T |
15908127 |
cagtttctagtaatagtggatgaagaccacagtaatggtcctagttttgtgacagacacacataaatgcctgcatataatgttcattcatcatcaaagtt |
15908226 |
T |
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| Q |
114 |
tctggaaatgttttgtttacacttttgaacttttttctaagaaaattctctctgactacttcttcttctatttttggtttagtaaagtttcctctgtttt |
213 |
Q |
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| T |
15908227 |
tctggaaatgttttgtttacacttttgaactttttt-taagaaaattctctctgactagttcttcttctatttttggtttagtaaagtttcctctgtttt |
15908325 |
T |
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| Q |
214 |
gacaaatttactcaaacaagaaattagtactgtttctattttannnnnnnaaaaggctaaaatgttagtacagtttctatat-tggcttgaatctatgca |
312 |
Q |
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| T |
15908326 |
gacaaatttactcaaacaagaaactagtactgtttctattttattttttgaaaaggctaaaatgttagtacagttgctatatatggcttgaatctatgca |
15908425 |
T |
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| Q |
313 |
tacaaaaaggcagcaacaaaatcttgcaagataatattttcagatcatggtatgaatttctgttgttagtgtcaaaat |
390 |
Q |
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| T |
15908426 |
tacaaaaaggcagcaacaaaatcttgcaagataatattttcagatcatggtttgaatttctattgttggtgtcaaaat |
15908503 |
T |
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