View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10321_low_5 (Length: 252)

Name: NF10321_low_5
Description: NF10321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10321_low_5
NF10321_low_5
[»] chr5 (37 HSPs)
chr5 (103-246)||(21961245-21961388)
chr5 (114-245)||(5213033-5213164)
chr5 (114-241)||(39036433-39036560)
chr5 (176-245)||(40512853-40512922)
chr5 (174-246)||(32300588-32300660)
chr5 (176-235)||(23988608-23988667)
chr5 (176-235)||(35448170-35448229)
chr5 (176-235)||(42148336-42148395)
chr5 (181-235)||(32334818-32334872)
chr5 (176-245)||(5364439-5364508)
chr5 (114-223)||(22613820-22613929)
chr5 (176-233)||(38697994-38698051)
chr5 (103-235)||(39894810-39894942)
chr5 (176-235)||(29627297-29627356)
chr5 (114-233)||(32002125-32002244)
chr5 (176-235)||(37516173-37516232)
chr5 (114-235)||(4924949-4925070)
chr5 (114-235)||(35290315-35290436)
chr5 (114-235)||(37843686-37843807)
chr5 (129-222)||(39405806-39405899)
chr5 (103-223)||(970179-970299)
chr5 (174-246)||(25946266-25946340)
chr5 (129-223)||(43067270-43067364)
chr5 (129-235)||(43517186-43517292)
chr5 (174-223)||(4300003-4300052)
chr5 (174-223)||(16048124-16048173)
chr5 (191-246)||(966076-966131)
chr5 (176-235)||(14475407-14475466)
chr5 (176-235)||(19868858-19868917)
chr5 (176-235)||(19889683-19889742)
chr5 (176-223)||(41411331-41411378)
chr5 (176-235)||(42421714-42421773)
chr5 (181-235)||(30779923-30779977)
chr5 (176-217)||(1830701-1830742)
chr5 (174-235)||(15268139-15268200)
chr5 (176-217)||(40316168-40316209)
chr5 (55-107)||(25563693-25563745)
[»] chr4 (49 HSPs)
chr4 (109-246)||(10181006-10181143)
chr4 (114-241)||(3442455-3442582)
chr4 (174-235)||(5735300-5735361)
chr4 (174-235)||(5744254-5744315)
chr4 (186-246)||(37715614-37715674)
chr4 (176-235)||(3901312-3901371)
chr4 (176-235)||(4264163-4264222)
chr4 (176-235)||(6494617-6494676)
chr4 (114-233)||(19631339-19631458)
chr4 (176-235)||(28166303-28166362)
chr4 (176-235)||(45198513-45198572)
chr4 (176-235)||(46212523-46212582)
chr4 (176-235)||(46803660-46803719)
chr4 (181-246)||(27976748-27976816)
chr4 (174-235)||(55190885-55190946)
chr4 (176-232)||(37688206-37688262)
chr4 (176-235)||(1377061-1377120)
chr4 (176-235)||(5123330-5123389)
chr4 (176-235)||(26205877-26205936)
chr4 (176-235)||(28152020-28152079)
chr4 (191-246)||(40250605-40250660)
chr4 (176-235)||(47579316-47579375)
chr4 (114-233)||(3443498-3443617)
chr4 (176-235)||(4209392-4209451)
chr4 (176-235)||(18360146-18360205)
chr4 (176-235)||(21859092-21859151)
chr4 (176-235)||(21914955-21915014)
chr4 (174-233)||(32154717-32154776)
chr4 (176-235)||(36602723-36602782)
chr4 (114-237)||(39193939-39194062)
chr4 (176-235)||(39786529-39786588)
chr4 (176-235)||(50033049-50033108)
chr4 (181-235)||(23603825-23603879)
chr4 (129-223)||(25644400-25644494)
chr4 (181-235)||(53568383-53568437)
chr4 (129-235)||(55014291-55014397)
chr4 (182-235)||(19731344-19731397)
chr4 (175-223)||(6923112-6923160)
chr4 (128-232)||(55997146-55997250)
chr4 (114-217)||(19170650-19170753)
chr4 (176-235)||(19634021-19634080)
chr4 (176-235)||(23255964-23256023)
chr4 (176-235)||(49768474-49768533)
chr4 (189-232)||(53816427-53816470)
chr4 (181-223)||(19525892-19525934)
chr4 (181-234)||(51737131-51737184)
chr4 (174-218)||(6234948-6234992)
chr4 (191-235)||(14958037-14958081)
chr4 (191-235)||(39195669-39195713)
[»] chr1 (41 HSPs)
chr1 (174-246)||(27990885-27990956)
chr1 (176-235)||(48264984-48265043)
chr1 (114-235)||(25531807-25531928)
chr1 (174-235)||(32988520-32988581)
chr1 (176-235)||(39354437-39354496)
chr1 (176-235)||(48219815-48219874)
chr1 (176-235)||(50539289-50539348)
chr1 (176-235)||(52379018-52379077)
chr1 (186-246)||(33034197-33034258)
chr1 (181-245)||(45235023-45235087)
chr1 (176-235)||(38458758-38458817)
chr1 (176-235)||(42708533-42708592)
chr1 (129-223)||(16265074-16265168)
chr1 (129-223)||(16266203-16266297)
chr1 (129-223)||(26441678-26441772)
chr1 (181-235)||(49805430-49805484)
chr1 (174-246)||(51924797-51924866)
chr1 (114-235)||(3529205-3529326)
chr1 (129-217)||(3898697-3898785)
chr1 (114-214)||(23330502-23330602)
chr1 (103-235)||(31971487-31971619)
chr1 (176-235)||(29161871-29161930)
chr1 (176-235)||(32565775-32565834)
chr1 (176-235)||(50876393-50876452)
chr1 (181-235)||(1849728-1849782)
chr1 (181-235)||(14075764-14075818)
chr1 (129-223)||(24982392-24982486)
chr1 (191-245)||(43729764-43729818)
chr1 (181-235)||(47222243-47222297)
chr1 (114-235)||(30529161-30529282)
chr1 (114-235)||(37281121-37281242)
chr1 (114-235)||(38738089-38738210)
chr1 (174-223)||(50481319-50481368)
chr1 (176-223)||(23569847-23569894)
chr1 (174-217)||(43680116-43680159)
chr1 (181-235)||(4605027-4605081)
chr1 (181-235)||(16751631-16751685)
chr1 (181-223)||(48376199-48376241)
chr1 (174-235)||(31698759-31698820)
chr1 (54-102)||(2612080-2612128)
chr1 (211-247)||(43452908-43452944)
[»] chr3 (43 HSPs)
chr3 (103-246)||(8440567-8440709)
chr3 (114-235)||(45167328-45167449)
chr3 (174-246)||(9794346-9794418)
chr3 (176-235)||(8559178-8559237)
chr3 (174-235)||(18659081-18659142)
chr3 (176-245)||(38492071-38492140)
chr3 (176-245)||(38833683-38833752)
chr3 (176-245)||(51062409-51062478)
chr3 (114-235)||(54840239-54840360)
chr3 (176-235)||(7459993-7460052)
chr3 (176-235)||(21907025-21907084)
chr3 (129-223)||(4238746-4238840)
chr3 (129-223)||(10435175-10435269)
chr3 (114-235)||(10437311-10437432)
chr3 (176-241)||(37832923-37832988)
chr3 (174-235)||(53066403-53066464)
chr3 (103-235)||(10571244-10571376)
chr3 (103-223)||(32951236-32951356)
chr3 (181-245)||(34827341-34827405)
chr3 (189-241)||(35322230-35322282)
chr3 (176-235)||(43137880-43137939)
chr3 (176-235)||(46483580-46483639)
chr3 (176-235)||(51392465-51392524)
chr3 (129-223)||(17052905-17052999)
chr3 (181-235)||(45093749-45093803)
chr3 (182-235)||(28690545-28690598)
chr3 (114-235)||(32285287-32285408)
chr3 (114-235)||(35717966-35718087)
chr3 (176-235)||(1327340-1327399)
chr3 (103-246)||(5504982-5505124)
chr3 (176-235)||(25097360-25097419)
chr3 (176-235)||(27848981-27849040)
chr3 (176-235)||(48707016-48707075)
chr3 (114-233)||(3547532-3547650)
chr3 (174-236)||(9776670-9776732)
chr3 (176-222)||(47638097-47638143)
chr3 (114-235)||(29728209-29728330)
chr3 (186-246)||(8437295-8437355)
chr3 (174-246)||(15514348-15514420)
chr3 (176-235)||(9145531-9145590)
chr3 (176-223)||(49057897-49057944)
chr3 (174-218)||(35764880-35764924)
chr3 (174-222)||(36665061-36665109)
[»] chr8 (28 HSPs)
chr8 (114-242)||(25173780-25173909)
chr8 (174-235)||(38739686-38739747)
chr8 (114-235)||(29790971-29791092)
chr8 (174-235)||(37709928-37709989)
chr8 (174-235)||(38845229-38845290)
chr8 (176-235)||(40013680-40013739)
chr8 (176-235)||(45081841-45081900)
chr8 (181-235)||(43066156-43066210)
chr8 (176-241)||(2805649-2805714)
chr8 (114-235)||(13138243-13138364)
chr8 (176-233)||(30380561-30380618)
chr8 (55-107)||(9420746-9420798)
chr8 (176-235)||(3293275-3293334)
chr8 (176-235)||(30289953-30290012)
chr8 (129-223)||(31127931-31128025)
chr8 (176-245)||(2986358-2986426)
chr8 (114-235)||(6470874-6470995)
chr8 (114-235)||(8350991-8351112)
chr8 (174-246)||(148197-148269)
chr8 (181-233)||(9302531-9302583)
chr8 (103-223)||(18809317-18809437)
chr8 (103-231)||(39361158-39361286)
chr8 (129-235)||(12893560-12893666)
chr8 (114-235)||(1580876-1580997)
chr8 (174-246)||(120313-120384)
chr8 (206-246)||(35583843-35583883)
chr8 (55-102)||(11988727-11988774)
chr8 (176-234)||(886240-886298)
[»] chr7 (37 HSPs)
chr7 (181-246)||(42493808-42493873)
chr7 (176-245)||(44479893-44479962)
chr7 (176-245)||(47713675-47713744)
chr7 (103-235)||(10464215-10464347)
chr7 (174-246)||(39982285-39982357)
chr7 (176-235)||(36819725-36819784)
chr7 (176-235)||(42086811-42086870)
chr7 (181-245)||(31466536-31466600)
chr7 (176-235)||(19072798-19072857)
chr7 (176-235)||(36905555-36905614)
chr7 (176-235)||(37951118-37951177)
chr7 (191-246)||(46074532-46074587)
chr7 (176-235)||(47081009-47081068)
chr7 (129-223)||(35500873-35500967)
chr7 (176-245)||(23474142-23474211)
chr7 (109-246)||(26203168-26203305)
chr7 (176-233)||(36859381-36859438)
chr7 (181-222)||(42834470-42834511)
chr7 (103-223)||(36643203-36643323)
chr7 (176-235)||(2400314-2400373)
chr7 (191-246)||(3680524-3680579)
chr7 (176-235)||(21392047-21392106)
chr7 (176-235)||(28185581-28185640)
chr7 (176-235)||(32619115-32619174)
chr7 (129-223)||(34478137-34478231)
chr7 (174-235)||(4033320-4033381)
chr7 (174-223)||(37231735-37231784)
chr7 (114-235)||(48531351-48531472)
chr7 (181-241)||(4612265-4612325)
chr7 (114-235)||(31497815-31497935)
chr7 (114-217)||(47537970-47538073)
chr7 (198-245)||(47713774-47713821)
chr7 (176-217)||(27916641-27916682)
chr7 (174-217)||(2450735-2450779)
chr7 (31-79)||(9136686-9136734)
chr7 (186-246)||(23348538-23348598)
chr7 (109-165)||(41796755-41796811)
[»] chr2 (31 HSPs)
chr2 (114-234)||(4045344-4045464)
chr2 (103-245)||(42038542-42038684)
chr2 (174-235)||(27559604-27559665)
chr2 (174-235)||(44330413-44330474)
chr2 (103-235)||(23671405-23671537)
chr2 (114-245)||(7443002-7443133)
chr2 (176-235)||(14372106-14372165)
chr2 (181-235)||(14707712-14707766)
chr2 (176-233)||(20517450-20517507)
chr2 (174-246)||(25786580-25786653)
chr2 (174-235)||(34826941-34827002)
chr2 (176-233)||(41172930-41172987)
chr2 (174-246)||(19192829-19192901)
chr2 (103-235)||(40898669-40898799)
chr2 (176-235)||(3987405-3987464)
chr2 (176-235)||(16941984-16942043)
chr2 (176-235)||(17012649-17012708)
chr2 (176-235)||(18718268-18718327)
chr2 (114-245)||(30708747-30708878)
chr2 (176-235)||(40425422-40425481)
chr2 (176-235)||(36199124-36199183)
chr2 (176-235)||(41463690-41463749)
chr2 (176-235)||(44283452-44283511)
chr2 (181-235)||(4083236-4083290)
chr2 (186-235)||(38588072-38588121)
chr2 (174-223)||(40598169-40598218)
chr2 (211-246)||(15770902-15770937)
chr2 (176-235)||(32776073-32776132)
chr2 (181-235)||(38137708-38137762)
chr2 (197-246)||(5471714-5471763)
chr2 (191-235)||(5030459-5030503)
[»] chr6 (20 HSPs)
chr6 (114-235)||(643542-643663)
chr6 (174-235)||(22020305-22020366)
chr6 (176-235)||(7098046-7098105)
chr6 (176-235)||(8796079-8796138)
chr6 (176-235)||(29986331-29986390)
chr6 (174-241)||(31854841-31854908)
chr6 (176-235)||(13207126-13207185)
chr6 (176-235)||(20662232-20662291)
chr6 (176-235)||(24150770-24150829)
chr6 (176-235)||(29403673-29403732)
chr6 (176-245)||(18991923-18991992)
chr6 (176-235)||(11114594-11114653)
chr6 (176-223)||(25435452-25435499)
chr6 (129-223)||(25163205-25163299)
chr6 (114-223)||(33121583-33121692)
chr6 (199-246)||(6612658-6612704)
chr6 (129-235)||(17417553-17417659)
chr6 (174-235)||(16434699-16434760)
chr6 (181-246)||(23635965-23636030)
chr6 (176-235)||(30237194-30237254)
[»] scaffold0294 (1 HSPs)
scaffold0294 (174-246)||(12617-12689)
[»] scaffold0051 (1 HSPs)
scaffold0051 (176-235)||(41390-41449)
[»] scaffold0027 (1 HSPs)
scaffold0027 (181-235)||(117350-117404)
[»] scaffold0459 (1 HSPs)
scaffold0459 (176-245)||(12771-12840)
[»] scaffold0366 (2 HSPs)
scaffold0366 (176-245)||(10412-10481)
scaffold0366 (176-245)||(14078-14147)
[»] scaffold0092 (1 HSPs)
scaffold0092 (176-235)||(44281-44340)
[»] scaffold0111 (1 HSPs)
scaffold0111 (114-217)||(38471-38574)


Alignment Details
Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 21961388 - 21961245
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    |||||| ||| ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        |||||| |||| |||||||||||||||||    
T  21961388 tatcaattaagatgttgttggattcgtctcgatgaatattttcaaaatattaaattttaataattttttctaatagataattaaagatattaaagataaa 21961289  T
Q  203 acatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    ||||||  |||| |||||||||||||||||||||| ||||||||    
T  21961288 acatatgaattgatatgtgtgacagagtcaactgtatcacttaa 21961245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 5213033 - 5213164
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||||||||||||||||||| ||||    
T  5213033 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatattaaagataaaacatatgcatt 5213132  T
Q  214 ggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| ||||| |||||||||||  ||||||||    
T  5213133 ggtacgtgtgtcagagtcaactaggtcactta 5213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 241
Target Start/End: Complemental strand, 39036560 - 39036433
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||||||||    
T  39036560 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatacatt 39036461  T
Q  214 ggtatgtgtgacagagtcaactgtgtca 241  Q
    |||| ||||| ||||||||||| |||||    
T  39036460 ggtacgtgtgtcagagtcaactatgtca 39036433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 40512853 - 40512922
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  40512853 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 40512922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 32300660 - 32300588
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| |||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||| ||||    
T  32300660 aatagataattaaagatattaaagataaaaaatatgcattgatatttgtgacagagtcaactgtgtcatttaa 32300588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 23988667 - 23988608
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  23988667 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 23988608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 35448170 - 35448229
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  35448170 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 35448229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 42148395 - 42148336
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  42148395 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 42148336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 32334818 - 32334872
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  32334818 aattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 32334872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 5364508 - 5364439
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| ||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  5364508 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 5364439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 22613820 - 22613929
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    |||||||||||   ||||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| ||||    
T  22613820 atgttgttggaatcatctcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcatt 22613919  T
Q  214 ggtatgtgtg 223  Q
    |||| |||||    
T  22613920 ggtacgtgtg 22613929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 38698051 - 38697994
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  38698051 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 38697994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 39894942 - 39894810
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||   |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||    
T  39894942 tatcatataagatgttgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaa 39894843  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| ||||||||||| || |||||||||||    
T  39894842 acatatgcattggtatgtatgtcagagtcaact 39894810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 29627356 - 29627297
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||    
T  29627356 tagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaact 29627297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 32002125 - 32002244
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    |||||||||||| | |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  32002125 atgttgttggatttgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 32002224  T
Q  214 ggtatgtgtgacagagtcaa 233  Q
    ||||||| || |||||||||    
T  32002225 ggtatgtatgtcagagtcaa 32002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 37516232 - 37516173
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  37516232 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 37516173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 4924949 - 4925070
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  4924949 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 4925048  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| ||| |||||||    
T  4925049 ggtacgtgtgtcagggtcaact 4925070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 35290436 - 35290315
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||| |||| ||||    
T  35290436 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcatt 35290337  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  35290336 ggtacgtgtgtcagagtcaact 35290315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 37843686 - 37843807
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||          |||| |||||||||||| ||| ||||||||||| ||||    
T  37843686 atgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagatatcaaatataaaacatatgcatt 37843785  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  37843786 ggtacgtgtgtcagagtcaact 37843807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 39405899 - 39405806
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgt 222  Q
    ||||||||||  |||| ||||||||||  ||||||||        |||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  39405899 tctcgatgaatctttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgt 39405806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 970299 - 970179
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| |||||||||||    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||  |||||||||    
T  970299 tatcatataagatgttgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataacaaagataaa 970200  T
Q  203 acatatacattggtatgtgtg 223  Q
    |||||| |||||||| |||||    
T  970199 acatatgcattggtacgtgtg 970179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 25946266 - 25946340
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatata--cattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| |||||| ||||||||||| |||||  ||||| ||| |||||||||||||||| ||||||||||    
T  25946266 aatagaaaattaaagataataaagataaaaaatatatacattgatatatgtgacagagtcaactatgtcacttaa 25946340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 43067364 - 43067270
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||| | |||||||||||| ||||||||||||||| |||||||| |||||    
T  43067364 tctcgatgaatatttttaaaatattaagttttcataattttttttaataaagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 43067270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 43517186 - 43517292
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacaga 228  Q
    |||||||||| ||||| ||||||||||| ||| ||||        | |||| |||||| ||||| ||||||||||||||| |||| ||| ||||| ||||    
T  43517186 tctcgatgaatatttttaaaatattaattttttataattttttttagtagagaattgatgatatcaaagataaaacatatgcattagtacgtgtgtcaga 43517285  T
Q  229 gtcaact 235  Q
    |||||||    
T  43517286 gtcaact 43517292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 4300003 - 4300052
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  4300003 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 4300052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 16048173 - 16048124
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  16048173 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 16048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 966076 - 966131
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    ||||||||||||| |||| |||| |||| | ||||| |||||||||||||||||||    
T  966076 attaaagataaaaaatatgcattagtatatatgacaaagtcaactgtgtcacttaa 966131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 14475407 - 14475466
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||| ||| ||||| | |||||||||    
T  14475407 tagagaattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaact 14475466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 19868858 - 19868917
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| |||  ||||||||||||||| |||||||| ||||| | |||||||||    
T  19868858 tagacaattgaaaatagcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 19868917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 19889742 - 19889683
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||  | |||||||||    
T  19889742 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaact 19889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 41411331 - 41411378
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  41411331 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 41411378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 42421773 - 42421714
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||| |||| ||||| | |||||||||    
T  42421773 tagagaattgaagatatcaaagataaaacatatgcataggtacgtgtgtcggagtcaact 42421714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 30779923 - 30779977
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| |||||||||||||||  ||||||| ||||| | |||||||||    
T  30779923 aattgaagatatgaaagataaaacatatgtattggtacgtgtgtcggagtcaact 30779977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 1830742 - 1830701
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggta 217  Q
    |||| |||||||||||| ||||||||||||||| ||||||||    
T  1830742 tagagaattgaagatatcaaagataaaacatatgcattggta 1830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 15268200 - 15268139
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||||||| ||||||||||| ||||  || ||||| | |||||||||    
T  15268200 aatagagaattgaagatattaaaaataaaacatatgcattaatacgtgtgtcggagtcaact 15268139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 40316209 - 40316168
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggta 217  Q
    |||| |||||||||||| ||||||||||||||| ||||||||    
T  40316209 tagagaattgaagatatcaaagataaaacatatgcattggta 40316168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 25563745 - 25563693
Alignment:
Q  55 taatagatgatctatttgataatgtacattattgatctaacatatttttatca 107  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||| ||| ||||    
T  25563745 taatagatgacctagttgacaatgtacattattgatttaacatactttgatca 25563693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 10181143 - 10181006
Alignment:
Q  109 ataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatat 208  Q
    |||| |||||||||||| | ||| ||| || ||||| ||||||||||  ||||||||        |||||| ||||||| ||||||||||||||||||||    
T  10181143 ataagatgttgttggatttgtcttgataaatatttttaaaatattaaattttcataattttttctaatagataattgaaaatattaaagataaaacatat 10181044  T
Q  209 acattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
      ||||||||||||||||||||||||||| ||| ||||    
T  10181043 gtattggtatgtgtgacagagtcaactgtatcaattaa 10181006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 3442455 - 3442582
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||  ||||| |||||||||| |||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  3442455 atgttgttggattcgtctcgatgagtatttttaaaatattaaaattttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 3442554  T
Q  214 ggtatgtgtgacagagtcaactgtgtca 241  Q
    |||||||||| ||||||||||| |||||    
T  3442555 ggtatgtgtgtcagagtcaactatgtca 3442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 5735361 - 5735300
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  5735361 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 5735300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 5744254 - 5744315
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  5744254 aatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaact 5744315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 37715674 - 37715614
Alignment:
Q  186 aagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||    
T  37715674 aagatattaaagataaaaaatatacattggtatgtacgacagaatcaactgtgtcacttaa 37715614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 3901312 - 3901371
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  3901312 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 3901371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 4264222 - 4264163
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  4264222 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 4264163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 6494676 - 6494617
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  6494676 tagagaattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaact 6494617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 233
Target Start/End: Complemental strand, 19631458 - 19631339
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   ||| |||||| ||||||||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| ||||    
T  19631458 atgttgttggattcgtcttgatgaatattttaaaaatattaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcatt 19631359  T
Q  214 ggtatgtgtgacagagtcaa 233  Q
    |||| ||||| | |||||||    
T  19631358 ggtacgtgtgtcggagtcaa 19631339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 28166362 - 28166303
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  28166362 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 28166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 45198513 - 45198572
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  45198513 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 45198572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 46212523 - 46212582
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  46212523 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 46212582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 46803719 - 46803660
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  46803719 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 46803660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 27976748 - 27976816
Alignment:
Q  181 aattgaagatattaaagataaaacatatac---attggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||||||||||||||||||| |   |||||||||||||||| | |||||||||||||||||    
T  27976748 aattgaagatattaaagataaaacatatgcattattggtatgtgtgacaaaatcaactgtgtcacttaa 27976816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 55190885 - 55190946
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  55190885 aatagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaact 55190946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 37688206 - 37688262
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtca 232  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| ||||||||    
T  37688206 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtca 37688262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 1377120 - 1377061
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| || ||||||||    
T  1377120 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcatagtcaact 1377061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 5123330 - 5123389
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  5123330 tagataattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 5123389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 26205877 - 26205936
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||    
T  26205877 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaact 26205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 28152079 - 28152020
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  28152079 tagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaact 28152020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 40250660 - 40250605
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||    
T  40250660 attaaagataaaacatatacatggatatgtgtgatagagtcaactgtatcacttaa 40250605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 47579375 - 47579316
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||    
T  47579375 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaact 47579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 3443498 - 3443617
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  3443498 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 3443597  T
Q  214 ggtatgtgtgacagagtcaa 233  Q
     ||| ||||| |||||||||    
T  3443598 tgtacgtgtgtcagagtcaa 3443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 4209451 - 4209392
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||||||||  ||||||| ||||| |||||||||||    
T  4209451 tagagaattgaagatatcaaagataaaacatatgtattggtacgtgtgtcagagtcaact 4209392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 18360146 - 18360205
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||| | |||||||||||    
T  18360146 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaact 18360205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 21859092 - 21859151
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| |||| |||||||||||||||  ||||||||||||| |||||||||||    
T  21859092 tagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaact 21859151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 21914955 - 21915014
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| |||| |||||||||||||||  ||||||||||||| |||||||||||    
T  21914955 tagagaattgaaaatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaact 21915014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 32154776 - 32154717
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||||| |||| || |||||| |||||||| ||||||||||||||||| |||||||||||    
T  32154776 aatagataattaaatatattatagataaaatatatacattggtatgtgagacagagtcaa 32154717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 36602782 - 36602723
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||| | |||||||||||    
T  36602782 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgcgtcagagtcaact 36602723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 39194062 - 39193939
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||  ||||| ||||||||||  ||||||||        |||||| |||  |||||||||||||||||| |||| ||||    
T  39194062 atgttgttggattcgtctcgatgagtatttttaaaatattaaattttcataattgtttttaatagagaatgaaagatattaaagataaaagatatgcatt 39193963  T
Q  214 ggtatgtgtgacagagtcaactgt 237  Q
    | ||| |||| |||||||||||||    
T  39193962 gatatatgtgtcagagtcaactgt 39193939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 39786529 - 39786588
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||| || ||||| |||||||||||    
T  39786529 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaact 39786588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 50033108 - 50033049
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  50033108 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 50033049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 23603825 - 23603879
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| |||||||||||| || |||||||| ||||| |||||||||||    
T  23603825 aattgaagatatcaaagataaaacagatgcattggtacgtgtgtcagagtcaact 23603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 25644494 - 25644400
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| |||||| |||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  25644494 tctcgatgaatatttttaaaatagtaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 25644400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 53568437 - 53568383
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| ||||| |||||||| | |||||||||    
T  53568437 aattgaagatatcaaagataaaacatatgcattgatatgtgtgtcggagtcaact 53568383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 55014397 - 55014291
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacaga 228  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||| ||||||||| |||| ||||||||||||||| |||| ||| ||||| | ||    
T  55014397 tctcgatgaatatttttaaaatattaaattttcataatttttcttaatacacaattgaatatatcaaagataaaacatatgcattagtacgtgtgtcgga 55014298  T
Q  229 gtcaact 235  Q
    |||||||    
T  55014297 gtcaact 55014291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 19731344 - 19731397
Alignment:
Q  182 attgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  19731344 attgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 19731397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 6923112 - 6923160
Alignment:
Q  175 atagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    ||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  6923112 atagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 6923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 55997250 - 55997146
Alignment:
Q  128 atctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacag 227  Q
    ||||||||||| ||||| ||||||| ||  ||||||||        |||||| |||||||||||| ||||||||||| ||| |||||||| ||||| | |    
T  55997250 atctcgatgaatatttttaaaatataaaattttcataattttttttaatagagaattgaagatatcaaagataaaacgtatgcattggtacgtgtgtcgg 55997151  T
Q  228 agtca 232  Q
    |||||    
T  55997150 agtca 55997146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 19170650 - 19170753
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||          |||| ||||||||||||||||||||||| |||| ||||    
T  19170650 atgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatattaaagataaaatatatgcatt 19170749  T
Q  214 ggta 217  Q
    ||||    
T  19170750 ggta 19170753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 19634021 - 19634080
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||||||||  ||||||| ||||| | |||||||||    
T  19634021 tagagaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcggagtcaact 19634080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 23256023 - 23255964
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||| |||||| |||| |||||||| ||||| |||||||||||    
T  23256023 tagagaattgaagatatcaaatataaaatatatgcattggtacgtgtgtcagagtcaact 23255964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 49768533 - 49768474
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||| ||||| || || ||||||||    
T  49768533 tagagaattgaagatatcaaagataaaacatatgcattgatatgtatgtcatagtcaact 49768474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 53816470 - 53816427
Alignment:
Q  189 atattaaagataaaacatatacattggtatgtgtgacagagtca 232  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  53816470 atattaaagataaaaaatatacatcggtatatgtgacagagtca 53816427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Original strand, 19525892 - 19525934
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||||| ||||||||||||||| |||||||| |||||    
T  19525892 aattgaagatatcaaagataaaacatatgcattggtacgtgtg 19525934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 51737131 - 51737184
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaac 234  Q
    ||||||| |||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  51737131 aattgaaaatataaaagataaaacatatgcattggtacgtgtgtcggagtcaac 51737184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 6234948 - 6234992
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtat 218  Q
    |||||| |||| |||||||||||||||||| |||| |||||||||    
T  6234948 aatagataatttaagatattaaagataaaaaatatgcattggtat 6234992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 14958081 - 14958037
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||| || |||| |||||||||||||| |||||||||||    
T  14958081 attaaagatataaaatatgcattggtatgtgtgtcagagtcaact 14958037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 39195669 - 39195713
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||||||||| |||| ||||| |||||||| |||||||||||    
T  39195669 attaaagataaaaaatatgcattgatatgtgtgtcagagtcaact 39195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 27990885 - 27990956
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27990885 aatagagaattgaagatattaaagatgaaa-atatacattggtatgtgtgacagcgtcaactgtgtcacttaa 27990956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 48264984 - 48265043
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  48264984 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaact 48265043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 25531928 - 25531807
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  25531928 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 25531829  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||||||||| |||||||||||    
T  25531828 ggtatgtgtgtcagagtcaact 25531807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 32988520 - 32988581
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  32988520 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 32988581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 39354437 - 39354496
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  39354437 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 39354496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 48219815 - 48219874
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  48219815 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 48219874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 50539348 - 50539289
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  50539348 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 50539289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 52379077 - 52379018
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  52379077 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 52379018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 33034197 - 33034258
Alignment:
Q  186 aagatattaaagataaaaca-tatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||||    
T  33034197 aagatattaaagataaaaaaatatgcattggtatgtgtgacagagtcaaccgtgtcacttaa 33034258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 45235023 - 45235087
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||  ||||||||    
T  45235023 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcactta 45235087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 38458817 - 38458758
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||    
T  38458817 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaact 38458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 42708592 - 42708533
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  42708592 tagagaattgaagatatcaaatataaaacatatgcattggtatgtgtgtcagagtcaact 42708533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 16265168 - 16265074
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  16265168 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 16265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 16266297 - 16266203
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  16266297 tctcgatgaatatttttaaaatattaagttttcataaatttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 16266203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 26441772 - 26441678
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  26441772 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 26441678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 49805430 - 49805484
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| ||||||||||| || |||||||||||    
T  49805430 aattgaagatatcaaagataaaacatatgcattggtatgtttgtcagagtcaact 49805484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 51924866 - 51924797
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| |||||||||||||||||   ||| ||||||||||||||| ||||||||||||||| |||||    
T  51924866 aatagataattaaagatattaaagataaa---tatgcattggtatgtgtgatagagtcaactgtgtcccttaa 51924797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 3529326 - 3529205
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   ||||||| || ||||| ||||||||||  ||||||||        | |||| ||||||| |||| ||||||||||||||| ||||    
T  3529326 atgttgttggattcgtctcgatcaatatttttaaaatattaaattttcataaattgttttagtagagaattgaatatatcaaagataaaacatatgcatt 3529227  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  3529226 ggtacgtgtgtcagagtcaact 3529205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 3898697 - 3898785
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggta 217  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| ||||||||    
T  3898697 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggta 3898785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 23330602 - 23330502
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    |||||||||||| | ||||||| || ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| ||||    
T  23330602 atgttgttggatttgtctcgataaatatttttaaaatattaaattttcataattttttttaatagagaattgaagatatgaaagataaaacatatgcatt 23330503  T
Q  214 g 214  Q
    |    
T  23330502 g 23330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 31971487 - 31971619
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||        | |||| | ||||| |||| |||||||||    
T  31971487 tatcatataagatgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagagagttgaatatatcaaagataaa 31971586  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| ||||||||  |||| |||||||||||    
T  31971587 acatatgcattggtacatgtgtcagagtcaact 31971619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 29161930 - 29161871
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||||||||  ||||||| ||||| |||||||||||    
T  29161930 tagaaaattgaagatatcaaagataaaacatatgaattggtacgtgtgtcagagtcaact 29161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 32565834 - 32565775
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||| ||||||||| |||||||| ||||| |||||||||||    
T  32565834 tagagaattgaagatatcaaagagaaaacatatgcattggtacgtgtgtcagagtcaact 32565775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 50876452 - 50876393
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||| ||||  ||||||||||    
T  50876452 tagagaattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaact 50876393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 1849782 - 1849728
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||  ||||||||||    
T  1849782 aattgaagatatcaaagataaaacatatgcattggtatatgtgttagagtcaact 1849728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 14075818 - 14075764
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||| ||||||||||| |||||||||||||| | |||||||||    
T  14075818 aattgaagatatcaaatataaaacatatgcattggtatgtgtgtcggagtcaact 14075764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 24982486 - 24982392
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||| ||||||||||| |||||||| |||||    
T  24982486 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaatataaaacatatgcattggtacgtgtg 24982392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 43729818 - 43729764
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||||| || ||| |||| |||||||||||||| |||||||||||||||||||||    
T  43729818 attaaaaattaaaaatatgcattggtatgtgtgtcagagtcaactgtgtcactta 43729764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 47222297 - 47222243
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  47222297 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 47222243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 30529161 - 30529282
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| ||||||||||||  |||||||||||||| ||||    
T  30529161 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcatt 30529260  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    ||||  |||| |||||||||||    
T  30529261 ggtacttgtgtcagagtcaact 30529282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 37281242 - 37281121
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||||| || ||||    
T  37281242 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatataaaagataaaacacatgcatt 37281143  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
     |||||| || |||||||||||    
T  37281142 tgtatgtttgtcagagtcaact 37281121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 38738089 - 38738210
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||        | | || ||||||| |||| ||||||||||||||| ||||    
T  38738089 atgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttacttgagaattgaacatatcaaagataaaacatatgcatt 38738188  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| | |||||||||    
T  38738189 ggtacgtgtgtcggagtcaact 38738210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 50481368 - 50481319
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  50481368 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 50481319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 23569847 - 23569894
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  23569847 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 23569894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 43680159 - 43680116
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggta 217  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||    
T  43680159 aatagagaattgaagatatcaaagataaaacatatgcattggta 43680116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 4605081 - 4605027
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  4605081 aattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 4605027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 16751631 - 16751685
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  16751631 aattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 16751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 223
Target Start/End: Complemental strand, 48376241 - 48376199
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||||| ||||||||||||||| |||||||| |||||    
T  48376241 aattgaagatatcaaagataaaacatatgcattggtacgtgtg 48376199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 31698759 - 31698820
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||| || ||||||||||| ||| |||| ||||| |||||||| |||||||||||    
T  31698759 aatagataattaaatatattaaagattaaatatatgcattgatatgtgtgtcagagtcaact 31698820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 2612128 - 2612080
Alignment:
Q  54 gtaatagatgatctatttgataatgtacattattgatctaacatatttt 102  Q
    ||||||||| |||||||||| |||||  |||||||| ||||||||||||    
T  2612128 gtaatagataatctatttgacaatgttgattattgacctaacatatttt 2612080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 43452908 - 43452944
Alignment:
Q  211 attggtatgtgtgacagagtcaactgtgtcacttaac 247  Q
    ||||||||||||||||  |||||||||||||||||||    
T  43452908 attggtatgtgtgacaaggtcaactgtgtcacttaac 43452944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 8440567 - 8440709
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||  |||| |||||| ||||| ||||||||| ||||| ||||        |||||| || ||||||| |||||||||||    
T  8440567 tatcatataagatgttgttggattcatctggatgaatatttttaaaatatta-tattttataattttttataatagagaactgaagatgttaaagataaa 8440665  T
Q  203 acatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    | ||||||||||||||  ||||||||||||||||| ||||||||    
T  8440666 aaatatacattggtataagtgacagagtcaactgtatcacttaa 8440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 45167449 - 45167328
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||  ||||||||||||||||  ||| ||||        |||||| |||||||||||| ||||||||||||||| ||||    
T  45167449 atgttgttggattcgtctcgatgattattttaaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcatt 45167350  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||||||||| |||||||||||    
T  45167349 ggtatgtgtgtcagagtcaact 45167328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 9794346 - 9794418
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||||||||||||||||||||||  ||| ||||| ||||||||| |||||||||||||||||||||    
T  9794346 aatagataattgaagatattaaagataaaaattattcattgatatgtgtgatagagtcaactgtgtcacttaa 9794418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 8559178 - 8559237
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  8559178 tagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaact 8559237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 18659142 - 18659081
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  18659142 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 18659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 38492140 - 38492071
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||  ||||||||    
T  38492140 tagagaattgaagatattaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcactta 38492071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 38833752 - 38833683
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  38833752 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 38833683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 51062478 - 51062409
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  51062478 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 51062409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 54840239 - 54840360
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||  ||||||||||  ||||| ||||||||||  ||| ||||        |||| | |||||||||||| ||||||||||||||| ||||    
T  54840239 atgttgttggattcatctcgatgagtatttttaaaatattaaatttttataattttttttaataaagaattgaagatatcaaagataaaacatatgcatt 54840338  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||||||||| |||||||||||    
T  54840339 ggtatgtgtgtcagagtcaact 54840360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 7459993 - 7460052
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  7459993 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 7460052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 21907084 - 21907025
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  21907084 tagataattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 21907025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 4238746 - 4238840
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  4238746 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtg 4238840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 10435269 - 10435175
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  10435269 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattggtacgtgtg 10435175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 10437432 - 10437311
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    |||||||||||| | |||||||||| ||||| ||||||||||  ||| ||||        | || | |||||||||||| |||||||||||||||| |||    
T  10437432 atgttgttggatttgtctcgatgaatatttttaaaatattaaatttttataagtttttttagtaaagaattgaagatatcaaagataaaacatataaatt 10437333  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  10437332 ggtacgtgtgtcagagtcaact 10437311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 37832988 - 37832923
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtca 241  Q
    |||| |||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  37832988 tagagaattgaagatatcaaaaataaaacatatgcattggtatgtgtgtcagagtcaactatgtca 37832923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 53066464 - 53066403
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  53066464 aatagataattgaagatatcaaagataaaacatatgcattggtaagtgtgtcagagtcaact 53066403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 10571244 - 10571376
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    |||||| ||| ||||||||||||   |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||    
T  10571244 tatcaagtaagatgttgttggattcttctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaa 10571343  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||  ||||||||||||| |||||||||||    
T  10571344 acatatgtattggtatgtgtgtcagagtcaact 10571376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 32951236 - 32951356
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| |||||||||||    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||  |||||||||    
T  32951236 tatcatataagatgttgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataccaaagataaa 32951335  T
Q  203 acatatacattggtatgtgtg 223  Q
    |||||| ||||||||||||||    
T  32951336 acatatgcattggtatgtgtg 32951356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 34827405 - 34827341
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||  ||||||||    
T  34827405 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcactta 34827341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 35322282 - 35322230
Alignment:
Q  189 atattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtca 241  Q
    ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||    
T  35322282 atattaaagataaaaaatatatattggtatgtgcgacagagtcaactgtgtca 35322230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 43137939 - 43137880
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||    
T  43137939 tagagaattgaaaatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 43137880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 46483639 - 46483580
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  46483639 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 46483580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 51392465 - 51392524
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||    
T  51392465 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtaagagtcaact 51392524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 17052999 - 17052905
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  17052999 tctcgatgaatatttttaaaatattaaattttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattggtacgtgtg 17052905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 45093803 - 45093749
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  45093803 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 45093749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 28690598 - 28690545
Alignment:
Q  182 attgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||||||| ||||||||||||||| |||||||||||||| | |||||||||    
T  28690598 attgaagatatcaaagataaaacatatgcattggtatgtgtgtcggagtcaact 28690545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 32285287 - 32285408
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    |||||||||||| | |||||||||| ||||| ||||||||||   || ||||        | |||| |||||||||||| |||||||||||||||  |||    
T  32285287 atgttgttggatttgtctcgatgaatatttttaaaatattaaatctttataagtttttttagtagagaattgaagatatcaaagataaaacatatgtatt 32285386  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  32285387 ggtacgtgtgtcagagtcaact 32285408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 35717966 - 35718087
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| | ||| ||||||||||  ||||||||        | |||| |||||||||||| || |||||||||||| ||||    
T  35717966 atgttgttggattcgtctcgatgaatacttttaaaatattaaattttcataatattttttagtagaaaattgaagatatcaaggataaaacatatgcatt 35718065  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  35718066 ggtacgtgtgtcagagtcaact 35718087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 1327399 - 1327340
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| ||  ||||||||||    
T  1327399 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtaagagtcaact 1327340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 5504982 - 5505124
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| || |||||||||   |||||||||| || || ||||||||||  ||||||||        |||||| |||| |||||||||||||||||    
T  5504982 tatcatataaaatattgttggattcgtctcgatgaatatattcaaaatattaagttttcataatttttcctaatagagaattaaagatattaaagataaa 5505081  T
Q  203 acatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    | |  | |||||||||||||||| ||||||||||| ||| ||||    
T  5505082 aaacgt-cattggtatgtgtgacggagtcaactgtatcatttaa 5505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 25097360 - 25097419
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||  ||||||||||    
T  25097360 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgttagagtcaact 25097419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 27849040 - 27848981
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| || || ||||||||    
T  27849040 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcaaagtcaact 27848981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 48707016 - 48707075
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| || |||| ||||||    
T  48707016 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagaatcaact 48707075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 3547532 - 3547650
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  3547532 atgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttt-agtagataattgaagatatcaaagataaaacatatgcatt 3547630  T
Q  214 ggtatgtgtgacagagtcaa 233  Q
    |||| ||||| | |||||||    
T  3547631 ggtacgtgtgtcggagtcaa 3547650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 9776670 - 9776732
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactg 236  Q
    |||||| |||||||||||||||||||||||  ||| ||||| ||| ||| |||||||||||||    
T  9776670 aatagataattgaagatattaaagataaaaattattcattgatatatgtaacagagtcaactg 9776732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 47638143 - 47638097
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgt 222  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||    
T  47638143 tagagaattgaagatattaaagataaaacatatgcattggtacgtgt 47638097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 29728209 - 29728330
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| ||||||||||||  |||||||||||||| ||||    
T  29728209 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattgaagatatctaagataaaacatatgcatt 29728308  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    ||||  |||| |||||||||||    
T  29728309 ggtacttgtgtcagagtcaact 29728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 8437295 - 8437355
Alignment:
Q  186 aagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    ||||| ||||||||||||  || ||||||||||  |||| |||||||||||||||||||||    
T  8437295 aagatgttaaagataaaaagtacacattggtataagtgatagagtcaactgtgtcacttaa 8437355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 15514420 - 15514348
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| |||||| || |||||||| ||||||||||  |||||| | ||||| |||||||||||||||    
T  15514420 aatagataattaaagataatatagataaaaaatatacattgacatgtgtaagagagttaactgtgtcacttaa 15514348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 9145590 - 9145531
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||| ||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  9145590 tagaaaattcaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 9145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 49057944 - 49057897
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  49057944 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 49057897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 35764880 - 35764924
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtat 218  Q
    |||||| |||| |||||||||||||||||| |||| |||||||||    
T  35764880 aatagataatttaagatattaaagataaaaaatatgcattggtat 35764924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 36665109 - 36665061
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgt 222  Q
    |||||| || ||||||||| ||||||||||||||| |||||||| ||||    
T  36665109 aatagagaaatgaagatatcaaagataaaacatatgcattggtacgtgt 36665061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 25173780 - 25173909
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatattt-cataannnnnnnnaatagacaattgaagatattaaagataaaacatatacat 212  Q
    ||||||||||||   |||||||||| ||||| |||||| ||| |||| |||||        |||||| ||||||||||||||||||||||||||||  ||    
T  25173780 atgttgttggattcgtctcgatgaatatttttaaaataataaaattttcataaatttttttaatagaaaattgaagatattaaagataaaacatatgtat 25173879  T
Q  213 tggtatgtgtgacagagtcaactgtgtcac 242  Q
    ||||||| |||||||| |||||||||||||    
T  25173880 tggtatgcgtgacagaatcaactgtgtcac 25173909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 38739747 - 38739686
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  38739747 aatagagaattgaagatattaaagataaaacatatgcattggtatgtgtgtcagagtcaact 38739686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 29791092 - 29790971
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  29791092 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 29790993  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||||||||| |||||||||||    
T  29790992 ggtatgtgtgtcagagtcaact 29790971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 37709989 - 37709928
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  37709989 aatagagaattgaagatatcaaagataaaacatatacattggtatgtgtgttagagtcaact 37709928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 38845290 - 38845229
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  38845290 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 38845229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 40013739 - 40013680
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  40013739 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 40013680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 45081900 - 45081841
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  45081900 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 45081841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43066210 - 43066156
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  43066210 aattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 43066156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 2805649 - 2805714
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtca 241  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  2805649 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaactgggtca 2805714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 13138243 - 13138364
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  13138243 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 13138342  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  13138343 ggtacgtgtgtcagagtcaact 13138364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 30380618 - 30380561
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  30380618 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 30380561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 9420798 - 9420746
Alignment:
Q  55 taatagatgatctatttgataatgtacattattgatctaacatatttttatca 107  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  9420798 taatagatgatctatttgaaaatgtgcattattgatctaacatattttgatca 9420746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 3293275 - 3293334
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  3293275 tagagaattgaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaact 3293334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 30290012 - 30289953
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||| || |||||||||||    
T  30290012 tagagaattgaagatatcaaagataaaacatatgcattggtatgtatgtcagagtcaact 30289953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 31127931 - 31128025
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  31127931 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 31128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 2986426 - 2986358
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| || |||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  2986426 tagagaattgaagatatcaa-gataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 2986358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 6470995 - 6470874
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  6470995 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 6470896  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    | || ||||| |||||||||||    
T  6470895 gatacgtgtgtcagagtcaact 6470874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 8350991 - 8351112
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| || |    
T  8350991 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcact 8351090  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||| ||||| |||||||||||    
T  8351091 ggtacgtgtgtcagagtcaact 8351112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 148197 - 148269
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| || ||||||||||||||| ||||  |||| ||||||||||||| |||||||| ||||||||    
T  148197 aatagataattaaaaatattaaagataaaaaatatgtattgatatgtgtgacagaatcaactgtatcacttaa 148269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9302531 - 9302583
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||||||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  9302531 aattgaagatatcaaagataaaacatatacatttatatgtgtgccagagtcaa 9302583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 18809437 - 18809317
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| |||||||||||    |||||||||| ||||| ||||| ||||  ||||||||        |||||| |||||||||||| |||||||||    
T  18809437 tatcatataagatgttgttggaatcgtctcgatgaatatttttaaaatgttaagttttcataattttttttaatagagaattgaagatatcaaagataaa 18809338  T
Q  203 acatatacattggtatgtgtg 223  Q
    |||||| |||||||| |||||    
T  18809337 acatatgcattggtacgtgtg 18809317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 231
Target Start/End: Complemental strand, 39361286 - 39361158
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||   |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||| |||||    
T  39361286 tatcatataagatgttgttggattcgtctcgatgagtatttttaaaatattaaatttttataaaattttttagtagagaattgaagatatcaaaaataaa 39361187  T
Q  203 acatatacattggtatgtgtgacagagtc 231  Q
    |||||| |||||||||||||| |||||||    
T  39361186 acatatgcattggtatgtgtgtcagagtc 39361158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 12893666 - 12893560
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacaga 228  Q
    |||||||||| ||||| ||||||||||  ||||||||        | |||| |||||||||||| ||||||||||||||| ||||| || ||||| | ||    
T  12893666 tctcgatgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcgga 12893567  T
Q  229 gtcaact 235  Q
    |||||||    
T  12893566 gtcaact 12893560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 1580876 - 1580997
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||| |||| ||||    
T  1580876 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaatatatgcatt 1580975  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    | || ||||| |||||||||||    
T  1580976 gatacgtgtgtcagagtcaact 1580997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 120384 - 120313
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| ||||||||||||||| || ||||| |||||| ||| ||| |||||||||||||| ||||||    
T  120384 aatagataattaaagatattaaagatagaa-atatatattggtgtgtttgatagagtcaactgtgtaacttaa 120313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 35583883 - 35583843
Alignment:
Q  206 tatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35583883 tatacatttgtatgtgtgatagagtcaactgtgtcacttaa 35583843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 11988727 - 11988774
Alignment:
Q  55 taatagatgatctatttgataatgtacattattgatctaacatatttt 102  Q
    |||||||||| |||||||| |||||||||||||||  |||||||||||    
T  11988727 taatagatgacctatttgaaaatgtacattattgacttaacatatttt 11988774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 886240 - 886298
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaac 234  Q
    |||| |||| ||||||| ||||||||||||||| |||||||| ||||| | ||||||||    
T  886240 tagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaac 886298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 42493808 - 42493873
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||    
T  42493808 aattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaa 42493873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 44479893 - 44479962
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  44479893 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 44479962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 47713675 - 47713744
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  47713675 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 47713744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 10464215 - 10464347
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| |||||||||||    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| |||||||||    
T  10464215 tatcatataagatgttgttggaatcttctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaa 10464314  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||| ||||| || ||||||||    
T  10464315 acatatgcattggtacgtgtgtcaaagtcaact 10464347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 39982285 - 39982357
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||| |  ||||||||||||    
T  39982285 aatagagaattgaagatattaaagataaaacatatgcattattatgtgtgacagagtgagatgtgtcacttaa 39982357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 36819784 - 36819725
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  36819784 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 36819725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 42086811 - 42086870
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  42086811 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 42086870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 31466536 - 31466600
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||  ||||||||    
T  31466536 aattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcactta 31466600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 19072857 - 19072798
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||    
T  19072857 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaact 19072798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 36905614 - 36905555
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||||||||  ||||||||||||| |||||||||||    
T  36905614 tagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaact 36905555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 37951118 - 37951177
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||| | |||||||||||    
T  37951118 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgcgtcagagtcaact 37951177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 46074532 - 46074587
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    ||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||    
T  46074532 attaaagataaaaaatatacattgctatgtgcgtcagagtcaactgtgtcacttaa 46074587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 47081068 - 47081009
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||| ||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  47081068 tagagaatttaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 47081009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 35500873 - 35500967
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  35500873 tctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 35500967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 23474142 - 23474211
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| ||||| || ||||| |||||||||||  ||||||||    
T  23474142 tagagaattgaagatatcaaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcactta 23474211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 26203168 - 26203305
Alignment:
Q  109 ataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatat 208  Q
    |||| ||||||||||||   |||||||||| ||||||||||||||||  ||||||||        |||| | |||| ||||||||||| |||||| ||||    
T  26203168 ataagatgttgttggattcgtctcgatgaatattttaaaaatattaaattttcataattttttctaatatataattaaagatattaaaaataaaaaatat 26203267  T
Q  209 acattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
      ||| |||||||||| || |||||||| |||| ||||    
T  26203268 gtattagtatgtgtgatagggtcaactgagtcagttaa 26203305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 36859381 - 36859438
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||  ||||||||    
T  36859381 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgttagagtcaa 36859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 42834470 - 42834511
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgt 222  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  42834470 aattgaagatatcaaagataaaacatatacattggtatgtgt 42834511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 36643323 - 36643203
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| |||||||||||    ||||||| || ||||| ||||||||||  ||||||||        |||||| |||||||||||| |||||||||    
T  36643323 tatcatataagatgttgttggaatcgtctcgataaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaa 36643224  T
Q  203 acatatacattggtatgtgtg 223  Q
    |||||| |||||||| |||||    
T  36643223 acatatgcattggtacgtgtg 36643203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 2400373 - 2400314
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||| |||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  2400373 tagagaatggaagatatcaaagataaaacatatgcattggtatatgtgtcagagtcaact 2400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 3680524 - 3680579
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||||||||| ||||| ||||||||| ||| |||||| ||||||||||    
T  3680524 attaaagataaaacatatgcattgatatgtgtgatagaatcaactatgtcacttaa 3680579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 21392106 - 21392047
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||| ||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  21392106 tagagaattaaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 21392047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 28185581 - 28185640
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||| ||||||| |||||||||||||||  ||||||||||||| |||||||||||    
T  28185581 tagagaattaaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaact 28185640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 32619115 - 32619174
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||| ||||||||||| ||||| |||||||| |||||||||||    
T  32619115 tagagaattgaagatatcaaaaataaaacatatgcattgatatgtgtgtcagagtcaact 32619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 34478137 - 34478231
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        | |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  34478137 tctcgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 34478231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 4033381 - 4033320
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||| || ||||||||||||||| |||| ||||| |||||||| |||||||||||    
T  4033381 aatagataattaaatatattaaagataaaaaatatgcattgatatgtgtgtcagagtcaact 4033320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 37231735 - 37231784
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  37231735 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 37231784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 48531472 - 48531351
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||| |||| ||||    
T  48531472 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattgaagatatcaaagataaaatatatgcatt 48531373  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    | || ||||| |||||||||||    
T  48531372 gatacgtgtgtcagagtcaact 48531351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 4612265 - 4612325
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtca 241  Q
    |||||||||||| ||| |||||| |||| ||||||||| |||| |||||||||||| ||||    
T  4612265 aattgaagatatcaaacataaaatatatgcattggtatttgtgtcagagtcaactgggtca 4612325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 31497815 - 31497935
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||        | |||| |||||||||||| |||||||||||||||  |||    
T  31497815 atgttgttggattggtctcgatgaatatttttaaaatattaaattttcataactttttt-agtagataattgaagatatcaaagataaaacatatgtatt 31497913  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
     ||||||||| | |||||||||    
T  31497914 agtatgtgtgtcggagtcaact 31497935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 47538073 - 47537970
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  47538073 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 47537974  T
Q  214 ggta 217  Q
    ||||    
T  47537973 ggta 47537970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 47713774 - 47713821
Alignment:
Q  198 ataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    ||||||||||| |||||||||||||| |||||||||||  ||||||||    
T  47713774 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcactta 47713821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 27916682 - 27916641
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggta 217  Q
    |||| |||||||||||| ||| ||||||||||||||||||||    
T  27916682 tagataattgaagatatcaaaaataaaacatatacattggta 27916641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 2450779 - 2450735
Alignment:
Q  174 aatagacaattgaagatattaaagat-aaaacatatacattggta 217  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||    
T  2450779 aatagagaattgaagatattaaagataaaaacatatgcattggta 2450735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 9136734 - 9136686
Alignment:
Q  31 ttattgattactccctcaatccggtaatagatgatctatttgataatgt 79  Q
    ||||| ||||||||||| |||| | ||||||||||| ||||||||||||    
T  9136734 ttatttattactccctccatcccgcaatagatgatccatttgataatgt 9136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Original strand, 23348538 - 23348598
Alignment:
Q  186 aagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||| ||  ||| |||| ||||| ||| ||||| |||||||||||||||||||||    
T  23348538 aagatattaatgacgaaaaatatgcattgatatatgtgaaagagtcaactgtgtcacttaa 23348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 41796811 - 41796755
Alignment:
Q  109 ataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataa 165  Q
    |||| |||||||| ||| |||||||||||| ||||| ||||||||||  ||||||||    
T  41796811 ataaaatgttgttagatttatctcgatgaatatttttaaaatattaaattttcataa 41796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 234
Target Start/End: Original strand, 4045344 - 4045464
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        |||||| |||||||||||| ||||||||||||||| ||||    
T  4045344 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttaatagagaattgaagatatcaaagataaaacatatgcatt 4045443  T
Q  214 ggtatgtgtgacagagtcaac 234  Q
    |||||||||| ||||||||||    
T  4045444 ggtatgtgtgtcagagtcaac 4045464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 42038684 - 42038542
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||   |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||    
T  42038684 tatcatataagatgttgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaa 42038585  T
Q  203 acatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||||| |||||||||||||| |||||||||||  ||||||||    
T  42038584 acatatgcattggtatgtgtgtcagagtcaactaggtcactta 42038542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 27559665 - 27559604
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  27559665 aatagagaattgaagatatcaaagataaaacatatacattgatatgtgtgtcagagtcaact 27559604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 44330474 - 44330413
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  44330474 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 44330413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 23671537 - 23671405
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    ||||| |||| ||||||||||||   |||||||||  ||||| ||||||||||  ||| ||||        | |||| |||||||||||| |||||||||    
T  23671537 tatcatataagatgttgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaa 23671438  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||||| |||||||||||    
T  23671437 acatatgcattggtatgtgtgtcagagtcaact 23671405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 245
Target Start/End: Original strand, 7443002 - 7443133
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  7443002 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 7443101  T
Q  214 ggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| ||||| |||||||||||  ||||||||    
T  7443102 ggtacgtgtgtcagagtcaactaggtcactta 7443133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 14372165 - 14372106
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  14372165 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 14372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 14707712 - 14707766
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  14707712 aattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 14707766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 20517507 - 20517450
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  20517507 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 20517450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 25786653 - 25786580
Alignment:
Q  174 aatagacaattgaagatattaaagataaaaca-tatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| ||||||||||||||| ||||||| | ||| |||||||||||| ||||||||||||||||||| ||||    
T  25786653 aatagagaattgaagatattaaggataaaaaaatatgcattggtatgtgggacagagtcaactgtgtcatttaa 25786580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 34827002 - 34826941
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||    
T  34827002 aatagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaact 34826941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 41172930 - 41172987
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaa 233  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  41172930 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaa 41172987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 19192829 - 19192901
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| |||| |||||||||||||||||| |||||||||| ||| |||||||||||||| | | ||||||||    
T  19192829 aatagataattaaagatattaaagataaaaaatatacattgatatatgtgacagagtcaagtatatcacttaa 19192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 235
Target Start/End: Complemental strand, 40898799 - 40898669
Alignment:
Q  103 tatcaaataacatgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaa 202  Q
    |||||| ||| ||||||||||||  || |||||||| ||||||||| ||||||| ||||||||        | |||| |||||||||||| |||||||||    
T  40898799 tatcaagtaagatgttgttggattcatttcgatgaatattttaaaa-tattaat-tttcataattttttttagtagagaattgaagatatcaaagataaa 40898702  T
Q  203 acatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||||||| ||| ||||| | |||||||||    
T  40898701 acatatacattagtacgtgtgtcggagtcaact 40898669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 3987405 - 3987464
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||||||||  ||||||||||||| |||||||||||    
T  3987405 tagagaattgaagatatcaaagataaaacatatgtattggtatgtgtgtcagagtcaact 3987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 16941984 - 16942043
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||    
T  16941984 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 16942043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 17012649 - 17012708
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||    
T  17012649 tagagaattgaatatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 17012708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 18718327 - 18718268
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||    
T  18718327 tagagaattgaagatatcaaagataaaacatatgcattgatatgtgtgtcagagtcaact 18718268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 245
Target Start/End: Complemental strand, 30708878 - 30708747
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  30708878 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 30708779  T
Q  214 ggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| ||||| || ||||||||  ||||||||    
T  30708778 ggtacgtgtgtcaaagtcaactaggtcactta 30708747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 40425422 - 40425481
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||| ||||||    
T  40425422 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaact 40425481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 36199124 - 36199183
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||| |||||||| ||||||||||||||| |||| ||||||||| |||||||||||    
T  36199124 tagagaatcgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaact 36199183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 41463690 - 41463749
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||    
T  41463690 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcggagtcaact 41463749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 44283452 - 44283511
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||||| |||| ||||||    
T  44283452 tagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagaatcaact 44283511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 4083290 - 4083236
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| | |||||||||    
T  4083290 aattaaagatattaaagataaaacatatgcattgatatgtgtgtcggagtcaact 4083236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38588072 - 38588121
Alignment:
Q  186 aagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||| ||||||||||||||| |||||||||||||  |||||||||||    
T  38588072 aagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaact 38588121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 40598218 - 40598169
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  40598218 aatagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 40598169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 211 - 246
Target Start/End: Complemental strand, 15770937 - 15770902
Alignment:
Q  211 attggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||| |||||||||||||||||||||||    
T  15770937 attggtatgtgtaacagagtcaactgtgtcacttaa 15770902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 32776073 - 32776132
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||  | |||||||||    
T  32776073 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcggagtcaact 32776132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 38137708 - 38137762
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||| ||||||||||||||| |||| ||| ||||| | |||||||||    
T  38137708 aattgaagatatcaaagataaaacatatgcatttgtacgtgtgtcggagtcaact 38137762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 5471763 - 5471714
Alignment:
Q  197 gataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||||| ||||| |||||| |||||| ||| |||||||||||||    
T  5471763 gataaaacatatgcattgatatgtgcgacagaatcagctgtgtcacttaa 5471714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 5030459 - 5030503
Alignment:
Q  191 attaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    ||||||||||||| |||| |||||||||||||| || ||||||||    
T  5030459 attaaagataaaaaatatgcattggtatgtgtgtcaaagtcaact 5030503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 643542 - 643663
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||| ||||        | |||| |||||||||||| ||||||||||||||| ||||    
T  643542 atgttgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcatt 643641  T
Q  214 ggtatgtgtgacagagtcaact 235  Q
    |||||||||| |||||||||||    
T  643642 ggtatgtgtgtcagagtcaact 643663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 22020366 - 22020305
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  22020366 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 22020305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 7098046 - 7098105
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  7098046 tagaaaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 7098105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 8796138 - 8796079
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  8796138 tagagaattaaagatatcaaagataaaacatatacattggtatgtgtgtcagagtcaact 8796079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 29986331 - 29986390
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  29986331 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 29986390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 241
Target Start/End: Complemental strand, 31854908 - 31854841
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtca 241  Q
    |||||| |||||||||||| ||||||||||||||| |||||||||||||  |||||||||||| ||||    
T  31854908 aatagagaattgaagatatcaaagataaaacatatgcattggtatgtgtatcagagtcaactgggtca 31854841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 13207126 - 13207185
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  13207126 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtgtcagagtcaact 13207185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 20662232 - 20662291
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||||||||||||||||||| ||||||||||| || ||||| |||||    
T  20662232 tagagaattgaagatattaaagataaaacatatgcattggtatgtatgtcagaggcaact 20662291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 24150829 - 24150770
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| |||||||||| |||| |||||||||||||| |||||||||||    
T  24150829 tagagaattgaagatatcaaagataaaatatatgcattggtatgtgtgtcagagtcaact 24150770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 29403732 - 29403673
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||  |||||||||||||| |||||||||||    
T  29403732 tagagaattgaagatatcaaagataaaacatacgcattggtatgtgtgtcagagtcaact 29403673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 18991992 - 18991923
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||| ||||||||||| |||||||| ||||| |||||||||||  ||||||||    
T  18991992 tagaaaattgaagatatcaaaaataaaacatatgcattggtacgtgtgtcagagtcaactaggtcactta 18991923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 11114653 - 11114594
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||| |||||||| ||||||||||||||| |||||||||||||| |||| ||||||    
T  11114653 tagagaatcgaagatatcaaagataaaacatatgcattggtatgtgtgtcagaatcaact 11114594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 25435499 - 25435452
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  25435499 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtg 25435452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 25163299 - 25163205
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtg 223  Q
    |||||||||| ||||| ||||||||||  ||||||||        || ||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  25163299 tctcgatgaatatttttaaaatattaagttttcataattttttttaacagagaattgaagatatcaaagataaaacatatgcattggtacgtgtg 25163205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 223
Target Start/End: Complemental strand, 33121692 - 33121583
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||||||||||   |||||||||| ||||| ||||||||||  ||||||||          |||| |||||||||||| ||||||||||||||| ||||    
T  33121692 atgttgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcatt 33121593  T
Q  214 ggtatgtgtg 223  Q
    |||| |||||    
T  33121592 ggtacgtgtg 33121583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 6612658 - 6612704
Alignment:
Q  199 taaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  6612658 taaaacatat-cattgatatatgtgacagagtcaactgtgtcacttaa 6612704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 17417659 - 17417553
Alignment:
Q  129 tctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacaga 228  Q
    ||||||| || ||||| ||||||||||  ||||||||        |||||| |||| |||||||||||| ||||| |||||||| |||||||||  || |    
T  17417659 tctcgatcaatatttttaaaatattaaattttcataattttttcaaatagataattaaagatattaaagttaaaaaatatacatcggtatgtgtatcaaa 17417560  T
Q  229 gtcaact 235  Q
    |||||||    
T  17417559 gtcaact 17417553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 16434699 - 16434760
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||| |||| |||||||||||||||| | |||| |||||||||| ||| | |||||||||    
T  16434699 aatagataattaaagatattaaagataagaaatatgcattggtatgagtgtctgagtcaact 16434760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 23636030 - 23635965
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||| ||||||||||| |||||| |||||||||| ||  |||||||||||||| ||| ||| ||||    
T  23636030 aattaaagatattaaaaataaaaaatatacattgataaatgtgacagagtcaattgtatcatttaa 23635965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 30237254 - 30237194
Alignment:
Q  176 tagacaattgaagatattaaagataaaa-catatacattggtatgtgtgacagagtcaact 235  Q
    |||| ||| |||||||| |||||||||| ||||| |||||||| ||||| |||||||||||    
T  30237254 tagagaatcgaagatatcaaagataaaaacatatgcattggtacgtgtgtcagagtcaact 30237194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 12617 - 12689
Alignment:
Q  174 aatagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcacttaa 246  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||| | |||| ||||||||||||    
T  12617 aatagagaattgaagatattaacgataaaacatatgcattggtatatgtgacaaaatcaattgtgtcacttaa 12689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 41390 - 41449
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||| |||||||||||    
T  41390 tagagaattgaagatatcaaagataaaacatatgcattggtatgtgtgtcagagtcaact 41449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 117404 - 117350
Alignment:
Q  181 aattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  117404 aattgaagatattaaagataaaacatatgcattgatatgtgtgtcagagtcaact 117350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 12840 - 12771
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||  ||||||||    
T  12840 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcactta 12771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 10481 - 10412
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||  ||||||||    
T  10481 tagagaattgaagatatcaaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcactta 10412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 14147 - 14078
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaactgtgtcactta 245  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||  |||||||||||  ||||||||    
T  14147 tagagaattgaagatatcaaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcactta 14078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 44281 - 44340
Alignment:
Q  176 tagacaattgaagatattaaagataaaacatatacattggtatgtgtgacagagtcaact 235  Q
    |||| |||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||    
T  44281 tagagaattgaagatatcaaagataaaacatatgcattggtatgcgtgtcagagtcaact 44340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 38471 - 38574
Alignment:
Q  114 atgttgttggatgtatctcgatgaacattttaaaaatattaatatttcataannnnnnnnaatagacaattgaagatattaaagataaaacatatacatt 213  Q
    ||||| |||||| | |||||||||| ||||| ||||||||||  |||||||         | |||| |||||||||||| ||||||||||||||| ||||    
T  38471 atgtttttggatttgtctcgatgaatatttttaaaatattaaattttcatagttttttttagtagataattgaagatatcaaagataaaacatatgcatt 38570  T
Q  214 ggta 217  Q
    ||||    
T  38571 ggta 38574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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