View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10322_low_10 (Length: 244)
Name: NF10322_low_10
Description: NF10322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10322_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 32958802 - 32958612
Alignment:
| Q |
17 |
catgttagctattaaatcatcatcaaaaattactataaactaaaaccaatacaacaacccattatcataaaatactcatatacatcaaattaacatcatt |
116 |
Q |
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| T |
32958802 |
catgttaagtattaaatcatcatcaaaaattactataaactaaaaccaatacaacaacccattatcataaaatactcatatacatcaaattaacatcatt |
32958703 |
T |
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| Q |
117 |
tatgcacaaaaatacgaaaacatagatactactccggtcttaaatataagaaacagagtcaaacttaaagttgatgtattcagtggttttt |
207 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
32958702 |
tatgcacaaaaatacaaaaacatagatactactccggtcttaaatataagaaacagagtcaaacttaaagttgatgtattcggtcgttttt |
32958612 |
T |
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