View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10322_low_5 (Length: 381)
Name: NF10322_low_5
Description: NF10322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10322_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 44 - 365
Target Start/End: Complemental strand, 22313364 - 22313043
Alignment:
| Q |
44 |
gccaaagttttctttccaatattgtttgttttcttaggaaacaaacaagaaattgtgttagaatctcctcagctgttttatcatagtcccgttcaactgt |
143 |
Q |
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| T |
22313364 |
gccaaagttttctttccaatattgtttgttttcttaggaaacaaacaagaaattgtgttagaatctcctcagctgttttatcatagtcccattcaactgt |
22313265 |
T |
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| Q |
144 |
tttgtcgatttcacacacattaataggaaccaagagacaatttttccttctagccatgttgagtaataaatatttgtgttaaacttttcataaggaccat |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22313264 |
tttgtcgatttcacacacattaataggaaccaagagacaatttttccttctagccatgttgagtaataaatatttgtgttaaacttttcataaggaccat |
22313165 |
T |
|
| Q |
244 |
taaggttactaatattgcaattagatgtatatttcgtgtatagttnnnnnnnnctaatttggcgaaagtttattttaatttgattcttatttgtgaaatt |
343 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
22313164 |
taaggttactaatattgcaattagatgtatatttcgtgtatagttaaaaaaaactaatttggtgaaagtttattttaatttgattcttatttgtgaaatt |
22313065 |
T |
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| Q |
344 |
aaaatgttaccaaattcattta |
365 |
Q |
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|||||||||||||||||||||| |
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| T |
22313064 |
aaaatgttaccaaattcattta |
22313043 |
T |
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