View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10323_low_7 (Length: 299)

Name: NF10323_low_7
Description: NF10323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10323_low_7
NF10323_low_7
[»] scaffold0449 (1 HSPs)
scaffold0449 (1-202)||(4104-4286)
[»] chr5 (39 HSPs)
chr5 (226-281)||(37722909-37722964)
chr5 (226-281)||(6634015-6634070)
chr5 (226-281)||(9764338-9764393)
chr5 (226-281)||(15374064-15374119)
chr5 (226-281)||(40643921-40643976)
chr5 (228-282)||(28828369-28828423)
chr5 (228-281)||(2721575-2721628)
chr5 (224-281)||(15804320-15804377)
chr5 (228-281)||(28828451-28828504)
chr5 (226-281)||(2316378-2316433)
chr5 (226-281)||(9764442-9764497)
chr5 (228-275)||(13243514-13243561)
chr5 (226-281)||(16515122-16515177)
chr5 (226-281)||(22303885-22303940)
chr5 (226-281)||(22766952-22767007)
chr5 (226-281)||(26281284-26281339)
chr5 (226-281)||(32390076-32390131)
chr5 (226-281)||(40090429-40090484)
chr5 (227-281)||(3563278-3563332)
chr5 (226-281)||(13243457-13243514)
chr5 (227-281)||(20523237-20523291)
chr5 (228-281)||(32389974-32390027)
chr5 (228-280)||(15804399-15804451)
chr5 (226-281)||(927302-927357)
chr5 (226-281)||(15373960-15374015)
chr5 (226-281)||(23091963-23092017)
chr5 (226-281)||(25935305-25935360)
chr5 (226-281)||(32250113-32250167)
chr5 (226-281)||(35379344-35379398)
chr5 (226-281)||(41762230-41762285)
chr5 (228-281)||(19533922-19533975)
chr5 (226-281)||(20523133-20523188)
chr5 (226-277)||(23092070-23092121)
chr5 (227-274)||(33245394-33245441)
chr5 (226-281)||(34982216-34982270)
chr5 (226-281)||(40809341-40809396)
chr5 (234-275)||(12991333-12991374)
chr5 (228-281)||(37145516-37145569)
chr5 (226-281)||(32470986-32471039)
[»] chr4 (34 HSPs)
chr4 (226-281)||(4896648-4896703)
chr4 (226-281)||(15660287-15660342)
chr4 (228-281)||(26250911-26250964)
chr4 (226-281)||(2125857-2125912)
chr4 (226-281)||(15660183-15660238)
chr4 (226-281)||(49111416-49111471)
chr4 (228-281)||(4896736-4896789)
chr4 (226-281)||(857343-857398)
chr4 (226-281)||(1107156-1107211)
chr4 (226-281)||(1112605-1112660)
chr4 (226-281)||(5715744-5715799)
chr4 (226-281)||(7352916-7352971)
chr4 (226-281)||(11040968-11041022)
chr4 (226-281)||(31473849-31473904)
chr4 (226-281)||(36455907-36455962)
chr4 (226-281)||(41498594-41498649)
chr4 (227-281)||(4441338-4441392)
chr4 (226-280)||(14982280-14982334)
chr4 (228-278)||(42844650-42844700)
chr4 (228-281)||(7352814-7352867)
chr4 (228-281)||(10127976-10128029)
chr4 (229-281)||(10633035-10633087)
chr4 (226-281)||(10128078-10128133)
chr4 (226-281)||(11348341-11348396)
chr4 (226-281)||(28845975-28846030)
chr4 (226-280)||(16516171-16516225)
chr4 (228-281)||(31742778-31742831)
chr4 (226-275)||(31742874-31742923)
chr4 (234-281)||(1539649-1539696)
chr4 (226-281)||(36456030-36456085)
chr4 (231-281)||(28845876-28845926)
chr4 (228-281)||(19461754-19461807)
chr4 (228-273)||(42542979-42543024)
chr4 (226-281)||(1107051-1107107)
[»] chr3 (37 HSPs)
chr3 (226-281)||(9129448-9129503)
chr3 (226-281)||(9137555-9137610)
chr3 (226-281)||(46429500-46429555)
chr3 (226-281)||(47284330-47284385)
chr3 (226-281)||(5415783-5415838)
chr3 (226-281)||(46672820-46672875)
chr3 (226-281)||(49457343-49457398)
chr3 (226-281)||(5415887-5415942)
chr3 (226-281)||(7302346-7302401)
chr3 (226-281)||(27251998-27252053)
chr3 (226-281)||(36398006-36398061)
chr3 (226-281)||(44436258-44436313)
chr3 (226-281)||(44692822-44692877)
chr3 (226-281)||(44692926-44692981)
chr3 (226-281)||(46001364-46001419)
chr3 (226-281)||(47767432-47767487)
chr3 (226-281)||(53129860-53129915)
chr3 (226-280)||(42005971-42006025)
chr3 (228-281)||(42130694-42130747)
chr3 (226-281)||(9129344-9129399)
chr3 (226-281)||(9137451-9137506)
chr3 (230-281)||(21307549-21307600)
chr3 (226-281)||(28092214-28092269)
chr3 (226-281)||(31189414-31189469)
chr3 (226-281)||(37054394-37054449)
chr3 (226-281)||(37321550-37321605)
chr3 (226-281)||(53470446-53470501)
chr3 (230-280)||(35279920-35279970)
chr3 (228-274)||(39215949-39215995)
chr3 (245-281)||(31070510-31070546)
chr3 (226-281)||(671636-671691)
chr3 (234-281)||(31070415-31070461)
chr3 (226-281)||(34088571-34088626)
chr3 (226-281)||(39110394-39110449)
chr3 (226-281)||(46635857-46635912)
chr3 (226-257)||(47284226-47284257)
chr3 (230-274)||(1146969-1147013)
[»] chr2 (30 HSPs)
chr2 (226-281)||(17180297-17180352)
chr2 (226-281)||(784897-784952)
chr2 (226-281)||(14365700-14365755)
chr2 (226-281)||(41461619-41461674)
chr2 (228-281)||(11532271-11532324)
chr2 (228-281)||(11793897-11793950)
chr2 (228-280)||(41461517-41461569)
chr2 (230-281)||(11684603-11684654)
chr2 (226-281)||(14365803-14365858)
chr2 (226-281)||(14537199-14537254)
chr2 (226-281)||(27033490-27033545)
chr2 (226-280)||(45094490-45094544)
chr2 (228-281)||(44256211-44256263)
chr2 (226-281)||(769036-769091)
chr2 (226-281)||(1583827-1583882)
chr2 (226-281)||(10244177-10244232)
chr2 (226-281)||(10480119-10480174)
chr2 (226-281)||(11141305-11141360)
chr2 (226-281)||(11716408-11716463)
chr2 (234-281)||(11716503-11716550)
chr2 (226-281)||(33189275-33189330)
chr2 (226-281)||(35047697-35047752)
chr2 (227-280)||(30751365-30751418)
chr2 (229-281)||(28740599-28740651)
chr2 (226-281)||(13017779-13017834)
chr2 (226-281)||(17905654-17905709)
chr2 (234-281)||(30698289-30698336)
chr2 (226-280)||(7228031-7228085)
chr2 (226-275)||(11981580-11981629)
chr2 (232-280)||(40026070-40026118)
[»] chr1 (38 HSPs)
chr1 (226-280)||(8224768-8224822)
chr1 (228-281)||(40264134-40264187)
chr1 (226-281)||(4038179-4038234)
chr1 (226-281)||(15034763-15034818)
chr1 (226-281)||(23536067-23536122)
chr1 (226-281)||(38277415-38277470)
chr1 (227-281)||(32573026-32573080)
chr1 (228-281)||(38277519-38277571)
chr1 (228-281)||(50005183-50005236)
chr1 (229-281)||(37036967-37037019)
chr1 (226-281)||(4038075-4038130)
chr1 (226-281)||(15034659-15034714)
chr1 (226-281)||(24273238-24273293)
chr1 (226-281)||(26501097-26501152)
chr1 (226-281)||(30190240-30190295)
chr1 (226-281)||(34756427-34756482)
chr1 (226-281)||(44410415-44410470)
chr1 (226-281)||(50005079-50005134)
chr1 (228-281)||(28632603-28632656)
chr1 (228-281)||(28745799-28745852)
chr1 (226-279)||(31166310-31166363)
chr1 (228-281)||(34756531-34756584)
chr1 (229-281)||(45565397-45565449)
chr1 (226-281)||(6470704-6470759)
chr1 (230-281)||(27804269-27804320)
chr1 (226-281)||(27935589-27935644)
chr1 (226-281)||(47165230-47165285)
chr1 (231-281)||(28745900-28745950)
chr1 (235-280)||(37448420-37448465)
chr1 (226-278)||(10166499-10166551)
chr1 (226-274)||(43623003-43623051)
chr1 (226-281)||(25889158-25889212)
chr1 (226-281)||(27804369-27804424)
chr1 (226-281)||(29446750-29446805)
chr1 (226-281)||(32287951-32288006)
chr1 (226-256)||(17502198-17502228)
chr1 (228-281)||(34003379-34003432)
chr1 (233-281)||(37447920-37447968)
[»] scaffold0044 (1 HSPs)
scaffold0044 (230-281)||(56378-56429)
[»] chr8 (31 HSPs)
chr8 (226-281)||(14800064-14800119)
chr8 (226-281)||(24044960-24045015)
chr8 (226-280)||(37268112-37268166)
chr8 (228-281)||(4156271-4156324)
chr8 (228-281)||(13404829-13404882)
chr8 (226-281)||(3853616-3853671)
chr8 (226-281)||(3858074-3858129)
chr8 (226-281)||(14991692-14991747)
chr8 (226-281)||(17110869-17110924)
chr8 (226-281)||(31807409-31807463)
chr8 (226-281)||(33902667-33902722)
chr8 (226-281)||(42711384-42711439)
chr8 (228-281)||(3853720-3853773)
chr8 (228-281)||(3858178-3858231)
chr8 (226-281)||(11744747-11744802)
chr8 (226-281)||(17110973-17111028)
chr8 (226-281)||(28324690-28324745)
chr8 (226-281)||(29257379-29257434)
chr8 (226-281)||(33377325-33377380)
chr8 (226-281)||(40046804-40046859)
chr8 (226-281)||(44889354-44889409)
chr8 (228-281)||(29482835-29482888)
chr8 (226-274)||(32626069-32626117)
chr8 (226-281)||(14239-14293)
chr8 (226-281)||(23011734-23011789)
chr8 (226-281)||(33986004-33986059)
chr8 (226-281)||(36103101-36103156)
chr8 (230-281)||(44346706-44346757)
chr8 (243-281)||(13404931-13404969)
chr8 (243-281)||(40046894-40046932)
chr8 (226-271)||(27322687-27322732)
[»] chr7 (34 HSPs)
chr7 (226-281)||(2057499-2057554)
chr7 (226-281)||(35776959-35777014)
chr7 (226-281)||(40110737-40110792)
chr7 (226-281)||(43955517-43955572)
chr7 (228-281)||(43955618-43955671)
chr7 (226-281)||(2057395-2057450)
chr7 (226-281)||(5644781-5644836)
chr7 (226-281)||(6498769-6498824)
chr7 (230-281)||(23455251-23455302)
chr7 (226-281)||(25189230-25189285)
chr7 (226-281)||(26162141-26162196)
chr7 (226-281)||(28539172-28539227)
chr7 (226-281)||(31632722-31632777)
chr7 (226-275)||(34398959-34399008)
chr7 (226-281)||(5644677-5644732)
chr7 (226-281)||(14603266-14603321)
chr7 (226-281)||(21635885-21635940)
chr7 (226-281)||(29065819-29065874)
chr7 (226-281)||(29065923-29065978)
chr7 (226-273)||(29195709-29195756)
chr7 (226-281)||(34388369-34388424)
chr7 (226-281)||(35455804-35455859)
chr7 (226-281)||(39342646-39342701)
chr7 (226-281)||(40110842-40110897)
chr7 (226-281)||(44915195-44915250)
chr7 (227-281)||(9784935-9784989)
chr7 (226-281)||(18789250-18789305)
chr7 (226-281)||(23548615-23548670)
chr7 (226-281)||(34388265-34388320)
chr7 (226-281)||(49052786-49052840)
chr7 (228-277)||(18926812-18926861)
chr7 (224-257)||(19865564-19865597)
chr7 (232-280)||(21635990-21636038)
chr7 (228-280)||(22391592-22391644)
[»] chr6 (13 HSPs)
chr6 (226-281)||(9285647-9285702)
chr6 (226-281)||(9763116-9763171)
chr6 (226-281)||(6919811-6919866)
chr6 (226-281)||(34244998-34245053)
chr6 (226-281)||(8574695-8574750)
chr6 (226-281)||(8574769-8574824)
chr6 (226-281)||(29889452-29889507)
chr6 (228-281)||(6919710-6919763)
chr6 (228-281)||(9763014-9763067)
chr6 (226-281)||(13487275-13487330)
chr6 (230-281)||(15299529-15299579)
chr6 (226-281)||(28918165-28918220)
chr6 (226-266)||(33733432-33733472)
[»] scaffold1562 (2 HSPs)
scaffold1562 (228-281)||(509-562)
scaffold1562 (226-281)||(405-460)
[»] scaffold1158 (2 HSPs)
scaffold1158 (228-281)||(2031-2084)
scaffold1158 (226-281)||(2133-2188)
[»] scaffold0400 (1 HSPs)
scaffold0400 (227-281)||(4516-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (227-281)||(5160-5214)
[»] scaffold0048 (1 HSPs)
scaffold0048 (228-281)||(82945-82998)
[»] scaffold0169 (1 HSPs)
scaffold0169 (226-281)||(4075-4130)
[»] scaffold0129 (1 HSPs)
scaffold0129 (228-275)||(19200-19247)
[»] scaffold0009 (2 HSPs)
scaffold0009 (226-281)||(41997-42052)
scaffold0009 (226-281)||(42082-42137)
[»] scaffold0318 (1 HSPs)
scaffold0318 (226-281)||(2867-2922)
[»] scaffold0301 (1 HSPs)
scaffold0301 (228-281)||(7153-7206)


Alignment Details
Target: scaffold0449 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 4104 - 4286
Alignment:
Q  1 caaaggccaagaatgtatactgaaattttctcaatgtcatctttcaagtcctcagaaaggccaagaatgcataccttttggattgtgatagtgatatcat 100  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||              
T  4104 caaaggccaagaatgcatactgaaattttctcaatgtgatctttcaagtcctgagaaaggccaagaatgcataccttttgggttgtgata---------- 4193  T
Q  101 ttgtatcagatagccatggtgagggaggagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgag---atttatatataccattt 197  Q
                |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  4194 ------------gccatggtgagggaagagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgagggaatttatatataccattt 4281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 37722964 - 37722909
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattc 37722909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 6634015 - 6634070
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattc 6634070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 9764338 - 9764393
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 9764393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 15374119 - 15374064
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 15374064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 40643976 - 40643921
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 40643921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 28828369 - 28828423
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattct 282  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattct 28828423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 2721628 - 2721575
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 2721575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 15804320 - 15804377
Alignment:
Q  224 tgagagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  15804320 tgagagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattc 15804377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 28828504 - 28828451
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattc 28828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2316378 - 2316433
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattc 2316433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 9764497 - 9764442
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| ||| |||| |||||||||||||||||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattc 9764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 13243561 - 13243514
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 16515177 - 16515122
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattc 16515122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 22303940 - 22303885
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 22303885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 22766952 - 22767007
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattc 22767007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 26281339 - 26281284
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattc 26281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 32390131 - 32390076
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||| || |||| |||||||| |||||||||||||||||||||||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattc 32390076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 40090484 - 40090429
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattc 40090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 3563278 - 3563332
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattc 3563332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 13243457 - 13243514
Alignment:
Q  226 agagtgtgtttg--gatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 20523291 - 20523237
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 20523237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 32389974 - 32390027
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattc 32390027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 15804451 - 15804399
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 927302 - 927357
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| |||||| ||||||||||||||||    
T  927302 agagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattc 927357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 15373960 - 15374015
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||   |||| |||||||| |||||||||||||||||||||||    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattc 15374015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 23091963 - 23092017
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttgaaggaattc 23092017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 25935360 - 25935305
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||| |||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattc 25935305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 32250167 - 32250113
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||    
T  32250167 agagtgtgtttggatg-gggaatgttttgagggaaagtaatgttttgagggaattc 32250113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 35379344 - 35379398
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  35379344 agagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattc 35379398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 41762285 - 41762230
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 41762230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 19533975 - 19533922
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  ||||| |||||||| ||||||||||| |||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattc 19533922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 20523133 - 20523188
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| | |||| |||||||| |||||||| || |||||||||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattc 20523188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 23092121 - 23092070
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgaggga 277  Q
    |||||||||||||||| |||||| ||||||   |||||||||||||||||||    
T  23092121 agagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgaggga 23092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 274
Target Start/End: Complemental strand, 33245441 - 33245394
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 274  Q
    ||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgag 33245394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 34982216 - 34982270
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  |||||| |||||||| ||||| |||||||||||||||||    
T  34982216 agagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattc 34982270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 40809341 - 40809396
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||  ||| |||||||||||||||||||    
T  40809341 agagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattc 40809396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 12991374 - 12991333
Alignment:
Q  234 tttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    ||||||||||||||| |||||||| || ||||||||||||||    
T  12991374 tttggatgagggaatgttttgaggtaaagtaatgttttgagg 12991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 37145569 - 37145516
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||| ||||||||| |||||| |||||||| ||||||||||| |||| ||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattc 37145516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 32471039 - 32470986
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| ||  |||| |||||||||||||||||||||||    
T  32471039 agagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattc 32470986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 4896648 - 4896703
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattc 4896703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 15660342 - 15660287
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 15660287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 26250911 - 26250964
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattc 26250964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2125857 - 2125912
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattc 2125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 15660183 - 15660238
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattc 15660238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 49111471 - 49111416
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 49111416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 4896789 - 4896736
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattc 4896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 857398 - 857343
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 857343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 1107211 - 1107156
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattc 1107156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 1112605 - 1112660
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| ||||||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattc 1112660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 5715744 - 5715799
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattc 5715799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 7352971 - 7352916
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||||||||||    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 7352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 11040968 - 11041022
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  11040968 agagtgtgtttggatg-gggaatattttgagggaatgtaatgttttgagagaattc 11041022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 31473849 - 31473904
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 31473904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 36455907 - 36455962
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattc 36455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 41498649 - 41498594
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattc 41498594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 4441338 - 4441392
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattc 4441392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 14982280 - 14982334
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatt 14982334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 42844700 - 42844650
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaa 278  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaa 42844650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 7352814 - 7352867
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattc 7352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 10127976 - 10128029
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||| |||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattc 10128029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 10633035 - 10633087
Alignment:
Q  229 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 10633087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 10128133 - 10128078
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| |||||||| |||||| |||||||  |||||||||||||||||||||||    
T  10128133 agagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 10128078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 11348396 - 11348341
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| |||||||| |||||| |||| ||| |||||||||||||||||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattc 11348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 28846030 - 28845975
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| ||| |||||||||||||||||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattc 28845975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 16516171 - 16516225
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||| ||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatt 16516225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 31742778 - 31742831
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  |||||||||| ||| | |||||||||||||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattc 31742831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 31742923 - 31742874
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 1539649 - 1539696
Alignment:
Q  234 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 1539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 36456085 - 36456030
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||| |||||||| |||||    
T  36456085 agagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattc 36456030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 28845876 - 28845926
Alignment:
Q  231 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||  ||||| |||||||| |||||||||||| ||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattc 28845926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 19461807 - 19461754
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||| |||||||| || |||||||||| | |||||||||||||||| ||||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattc 19461754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 273  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 1107051 - 1107107
Alignment:
Q  226 agagtgtgtttggatgagggaa-tattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||| || | |||| ||| ||||||||||||||| |||||||    
T  1107051 agagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattc 1107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 9129503 - 9129448
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9129503 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 9129448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 9137610 - 9137555
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  9137610 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 9137555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 46429555 - 46429500
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattc 46429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 47284385 - 47284330
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattc 47284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 5415783 - 5415838
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattc 5415838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 46672875 - 46672820
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 46672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 49457343 - 49457398
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 49457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 5415942 - 5415887
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| |||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattc 5415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 7302346 - 7302401
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattc 7302401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 27252053 - 27251998
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||| || |||||||| |||||||||||||||||||||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattc 27251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 36398061 - 36398006
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattc 36398006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 44436258 - 44436313
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 44436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 44692822 - 44692877
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattc 44692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 44692981 - 44692926
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 44692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 46001364 - 46001419
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattc 46001419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 47767432 - 47767487
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 47767487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 53129915 - 53129860
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattc 53129860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 42006025 - 42005971
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatt 42005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 42130694 - 42130747
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattc 42130747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 9129344 - 9129399
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| |||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattc 9129399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 9137451 - 9137506
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| |||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattc 9137506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 21307600 - 21307549
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||||| ||||| || |||||||||||||||||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattc 21307549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 28092214 - 28092269
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||| |||||||||| |||||| |||||||| ||||| |||||||||||||||||    
T  28092214 agagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattc 28092269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 31189469 - 31189414
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||||| ||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattc 31189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 37054394 - 37054449
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||||| |||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattc 37054449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 37321550 - 37321605
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| |||||||| ||||||||||||||| || |||||||||||||| |||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattc 37321605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 53470501 - 53470446
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||| ||| |||||||| ||| || ||||||||||||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattc 53470446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 35279970 - 35279920
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||| |||||| |||||||| |||||||||||||||| |||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 39215995 - 39215949
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 274  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgag 39215949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 31070546 - 31070510
Alignment:
Q  245 gaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattc 31070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 671691 - 671636
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| |||||||  |||||| |||||||| |||||| ||||||||||||||||    
T  671691 agagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattc 671636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 31070415 - 31070461
Alignment:
Q  234 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||    
T  31070415 tttggatg-gggaatgttttgagggaatgtaatgttttgagggaattc 31070461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 34088571 - 34088626
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  | ||| |||||||| |||||| ||||||||||||||||    
T  34088571 agagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattc 34088626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 39110394 - 39110449
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| ||||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattc 39110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 46635857 - 46635912
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||  ||| |||||||  ||||||||||||||||| |||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattc 46635912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 257
Target Start/End: Complemental strand, 47284257 - 47284226
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgagg 257  Q
    ||||||||||||||||||||||||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagg 47284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 1147013 - 1146969
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 274  Q
    |||||||| ||||||||||||||||||  |||||||| |||||||    
T  1147013 tgtgtttgaatgagggaatattttgagctaatgtaattttttgag 1146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 17180297 - 17180352
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 17180352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 784952 - 784897
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattc 784897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 14365700 - 14365755
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 14365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 41461674 - 41461619
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 41461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 11532324 - 11532271
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattc 11532271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 11793897 - 11793950
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattc 11793950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 41461517 - 41461569
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatt 41461569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 11684603 - 11684654
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 11684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 14365858 - 14365803
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 14365803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 14537199 - 14537254
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattc 14537254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 27033490 - 27033545
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 27033545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 45094544 - 45094490
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatt 45094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 44256263 - 44256211
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattc 44256211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 769036 - 769091
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 769091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 1583882 - 1583827
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 1583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 10244177 - 10244232
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattc 10244232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 10480119 - 10480174
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||  ||||||||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattc 10480174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 11141305 - 11141360
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 11141360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 11716408 - 11716463
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||   |||| |||||||| |||||||||||||||||||||||    
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattc 11716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 281
Target Start/End: Complemental strand, 11716550 - 11716503
Alignment:
Q  234 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 11716503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 33189330 - 33189275
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 33189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 35047752 - 35047697
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattc 35047697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 30751418 - 30751365
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||| |||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatt 30751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 28740599 - 28740651
Alignment:
Q  229 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||| ||| || ||| |||||||| |||||||||||||||||||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattc 28740651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 13017779 - 13017834
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| |||||||| |||| |||||||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattc 13017834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 17905654 - 17905709
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||| |||||||||||| |||||||  ||||||||||||| | |||||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattc 17905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 281
Target Start/End: Original strand, 30698289 - 30698336
Alignment:
Q  234 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 30698336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 7228085 - 7228031
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||||| || ||| |||||||  ||||||||||||||| ||||||    
T  7228085 agagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatt 7228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 11981629 - 11981580
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    |||||||||||||||||  |||||||||  || |||||||||||||||||    
T  11981629 agagtgtgtttggatgaaagaatattttagggtaatgtaatgttttgagg 11981580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 40026070 - 40026118
Alignment:
Q  232 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||| ||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatt 40026118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 8224768 - 8224822
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaatt 8224822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 40264187 - 40264134
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattc 40264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 4038234 - 4038179
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 4038179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 15034818 - 15034763
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 15034763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 23536067 - 23536122
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 23536122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 38277415 - 38277470
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattc 38277470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 32573080 - 32573026
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattc 32573026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 38277571 - 38277519
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttgagggaattc 38277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 50005236 - 50005183
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattc 50005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 281
Target Start/End: Complemental strand, 37037019 - 37036967
Alignment:
Q  229 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattc 37036967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 4038075 - 4038130
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||| || |||||| |||||||| |||||||||||||||||||||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattc 4038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 15034659 - 15034714
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 15034714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 24273293 - 24273238
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 24273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 26501152 - 26501097
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 26501097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 30190295 - 30190240
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattc 30190240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 34756427 - 34756482
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 34756482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 44410470 - 44410415
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  ||||||||||||||| ||||||| |||||||||||||||    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattc 44410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 50005079 - 50005134
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattc 50005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 28632656 - 28632603
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattc 28632603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 28745799 - 28745852
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattc 28745852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 31166310 - 31166363
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaat 279  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| |||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaat 31166363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 34756584 - 34756531
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| ||| |||||||||||||||||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattc 34756531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 45565397 - 45565449
Alignment:
Q  229 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 45565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 6470759 - 6470704
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||  |||||||||||||||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattc 6470704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 27804269 - 27804320
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||||| |||||||| |||||||| ||||||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattc 27804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 27935644 - 27935589
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  | |||||||||||| ||||||||||||||||| |||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattc 27935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 47165285 - 47165230
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattc 47165230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 28745950 - 28745900
Alignment:
Q  231 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||| ||||||||| ||| |||||||| ||||||||||||||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattc 28745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 37448465 - 37448420
Alignment:
Q  235 ttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatt 37448420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 10166499 - 10166551
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaa 278  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||| ||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaa 10166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 43623051 - 43623003
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 274  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgag 43623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 25889158 - 25889212
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||||| |||||||    
T  25889158 agagtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattc 25889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 27804424 - 27804369
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||| || |||||||    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattc 27804369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 29446750 - 29446805
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| | | |||||| |||||| | |||||||||||||||||||||||    
T  29446750 agagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattc 29446805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 32288006 - 32287951
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||  |||||||| ||||||||||||||||| |||||    
T  32288006 agagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattc 32287951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 256
Target Start/End: Original strand, 17502198 - 17502228
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgag 256  Q
    |||||||||||||||||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgag 17502228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 34003379 - 34003432
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||| | ||||| |||| ||||||||| ||||    
T  34003379 agtgtgtttggatgagtgaatattttaaagcaatataatattttgagggcattc 34003432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 37447968 - 37447920
Alignment:
Q  233 gtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||  |||||||||| |||| ||||||||||||||| |||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattc 37447920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 56429 - 56378
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattc 56378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 14800119 - 14800064
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 14800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 24044960 - 24045015
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattc 24045015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 37268166 - 37268112
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatt 37268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 4156324 - 4156271
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattc 4156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 13404829 - 13404882
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattc 13404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 3853616 - 3853671
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 3853671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 3858074 - 3858129
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 3858129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 14991692 - 14991747
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattc 14991747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 17110869 - 17110924
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||| |||||||||||||||||||||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 17110924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 31807409 - 31807463
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattc 31807463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 33902667 - 33902722
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 33902722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 42711439 - 42711384
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  |||||| |||||||| |||||||||||||||||||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattc 42711384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 3853773 - 3853720
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| |||||||||||| ||||||||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattc 3853720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 3858231 - 3858178
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| || |||||||||||| |||||||||||| ||||||||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattc 3858178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 11744802 - 11744747
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||| |||||||    
T  11744802 agagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattc 11744747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 17111028 - 17110973
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattc 17110973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 28324745 - 28324690
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||| |||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattc 28324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 29257434 - 29257379
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 29257379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 33377380 - 33377325
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||    
T  33377380 agagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattc 33377325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 40046804 - 40046859
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||   |||| |||||||| |||||||||||||||||||||||    
T  40046804 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattc 40046859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 44889354 - 44889409
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| ||| |||||||||||||||||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattc 44889409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 29482888 - 29482835
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| || ||| ||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattc 29482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 32626117 - 32626069
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 274  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 14239 - 14293
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||| |||||||||    
T  14239 agagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattc 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 23011734 - 23011789
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| | | |||| |||||||| ||||||||||| |||||||||||    
T  23011734 agagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattc 23011789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 33986004 - 33986059
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| | |||| | |||||||||||||||| ||||||    
T  33986004 agagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattc 33986059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 36103101 - 36103156
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| |||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattc 36103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 44346757 - 44346706
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 44346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 13404969 - 13404931
Alignment:
Q  243 gggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattc 13404931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Complemental strand, 40046932 - 40046894
Alignment:
Q  243 gggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  40046932 gggaatgttttgaggtaatgtaatgttttgagggaattc 40046894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 271  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 2057554 - 2057499
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 2057499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 35777014 - 35776959
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattc 35776959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 40110737 - 40110792
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 40110792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 43955517 - 43955572
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 43955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 43955671 - 43955618
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 43955618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2057395 - 2057450
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattc 2057450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 5644836 - 5644781
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattc 5644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 6498824 - 6498769
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 6498769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 23455302 - 23455251
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattc 23455251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 25189285 - 25189230
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||| ||||||||||||||||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattc 25189230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 26162196 - 26162141
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 26162141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 28539227 - 28539172
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattc 28539172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 31632722 - 31632777
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 31632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 34399008 - 34398959
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 34398959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 5644677 - 5644732
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||  ||||| |||||||| |||||||||||||||||||||||    
T  5644677 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattc 5644732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 14603321 - 14603266
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 14603266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 21635885 - 21635940
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||||| ||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattc 21635940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 29065819 - 29065874
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||   |||| |||||||| |||||||||||||||||||||||    
T  29065819 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattc 29065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 29065978 - 29065923
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||| ||| |||||||||||||||||||||||    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattc 29065923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 29195709 - 29195756
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 273  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 34388424 - 34388369
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattc 34388369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 35455804 - 35455859
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 35455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 39342701 - 39342646
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 39342646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 40110897 - 40110842
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| ||| |||| |||||||||||||||||||||||    
T  40110897 agagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattc 40110842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 44915195 - 44915250
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||| |||| |||||||| || |||||||||||| |||||||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattc 44915250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 9784989 - 9784935
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||  ||||| |||||||| |||||| ||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattc 9784935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 18789305 - 18789250
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  |||||||||||||  ||| ||||||| |||||||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattc 18789250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 23548670 - 23548615
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||| |||||||||| |||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattc 23548615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 34388265 - 34388320
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || |||||||||||| || |||||||| |||| ||||||    
T  34388265 agagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattc 34388320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 49052786 - 49052840
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||||||| ||||||    
T  49052786 agagtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattc 49052840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 18926861 - 18926812
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgaggga 277  Q
    ||||||||| |||| ||| | ||||||||| |||||||||||||||||||    
T  18926861 agtgtgttttgatggggggacattttgaggtaatgtaatgttttgaggga 18926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 19865597 - 19865564
Alignment:
Q  224 tgagagtgtgtttggatgagggaatattttgagg 257  Q
    ||||||||||||||||||||||||| ||||||||    
T  19865597 tgagagtgtgtttggatgagggaatgttttgagg 19865564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 21636038 - 21635990
Alignment:
Q  232 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||| || ||| |||||||| ||||||||||||||| ||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatt 21635990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 22391644 - 22391592
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 280  Q
    |||||||||| |||||  ||| |||||||| |||||||||||||||| |||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatt 22391592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 9285647 - 9285702
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 9285702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 9763171 - 9763116
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattc 9763116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 6919866 - 6919811
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattc 6919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 34245053 - 34244998
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 34244998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 8574695 - 8574750
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattc 8574750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 8574824 - 8574769
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||    
T  8574824 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattc 8574769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 29889507 - 29889452
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||| | |||||||||||||||||||||||    
T  29889507 agagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattc 29889452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 6919710 - 6919763
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  |||||  ||||||| |||||||||||||||||||||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattc 6919763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 9763014 - 9763067
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| | || ||| |||||||| |||||||||||||||||||||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattc 9763067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 13487275 - 13487330
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||| |||| |||||| |||||||| |||||| |||| |||||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattc 13487330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 15299579 - 15299529
Alignment:
Q  230 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  15299579 tgtgtttggatg-gggaatgttttgagggaatgtaatgttttgaaggaattc 15299529  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 28918165 - 28918220
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| |||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattc 28918220  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaat 266  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

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Target: scaffold1562 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 562 - 509
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 509  T

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Target: scaffold1562; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 405 - 460
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattc 460  T

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Target: scaffold1158 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 2031 - 2084
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 2084  T

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Target: scaffold1158; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 2188 - 2133
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattc 2133  T

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Target: scaffold0400 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 4570 - 4516
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattc 4516  T

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Target: scaffold0365 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 5214 - 5160
Alignment:
Q  227 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattc 5160  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 82945 - 82998
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||| | |||| |||||||| |||||||||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattc 82998  T

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Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 4075 - 4130
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||| | ||||| |||||||  |||||||||||||||||||||||    
T  4075 agagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattc 4130  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 19200 - 19247
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 275  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttgagg 19247  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 41997 - 42052
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||| |||  ||||| |||||||| |||||||||||||||||||||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattc 42052  T

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Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 42137 - 42082
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||| ||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattc 42082  T

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Target: scaffold0318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2867 - 2922
Alignment:
Q  226 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||| |||| |||||| ||| |||  |||||||||||||||||||||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattc 2922  T

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Target: scaffold0301 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 7153 - 7206
Alignment:
Q  228 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 281  Q
    ||||||||||||||  ||||| |||||||| |||||| |||||| |||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattc 7206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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