View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10324_low_1 (Length: 591)
Name: NF10324_low_1
Description: NF10324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10324_low_1 |
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Alignment Details
Target: chr1 (Bit Score: 568; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 568; E-Value: 0
Query Start/End: Original strand, 1 - 584
Target Start/End: Original strand, 8437871 - 8438454
Alignment:
| Q |
1 |
tgcaaaaataacagtatcattcatttgtctcgacaacttaatcactgtcggataaaccttaacacatggcccacaatgtttaagaccaacatcaagaaca |
100 |
Q |
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| T |
8437871 |
tgcaaaaataacagtatcattcatttgtctcgacaacttaatcactgtcggataaaccttaacacatggcccacaatgtttaagaccaacatcaagaaca |
8437970 |
T |
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| Q |
101 |
ataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctgttgtgaagttgcactacacctgaatggttatcaccgtagtataaca |
200 |
Q |
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| T |
8437971 |
ataagcttatgatcaatcttatgatcctcaataagtttctcaacatcttctctgttgtgaagttgcactacacctgaatggttatcaccgtagtataaaa |
8438070 |
T |
|
| Q |
201 |
catcaccaacaagcatatctggaccaatagcttcttcttcatgaattttttctttgctcttgtagaaagtgaagtgtggtactttatcaaccttttctct |
300 |
Q |
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| T |
8438071 |
catcaccaacaagcatatctggaccaatagcttcttcttcatgaattttttctttgctcttgtagaaagtgaagtgtggtactttatcaaccttttctct |
8438170 |
T |
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| Q |
301 |
tttacagagttcttttgttttctctgattcatctcccataacaagaagaaactcaacatcgttacatgttcggcttaggtcaaccaagaaagggtatatc |
400 |
Q |
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| T |
8438171 |
tttacagagttcttttgttttctctgattcatctcccataacaagaagaaactcaacatcgttacatgttcggcttaggtcaaccaagaaagggtatatc |
8438270 |
T |
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| Q |
401 |
tctatgctttctgagtcgtcgcttgtagcgtactcaacaacaacgagtttgtcttttgctgattcaagtgcttcgtcgaactcttctatgctgtgaactc |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8438271 |
tctatgctttctgagtcgtcgcttgtagcgtactcaacaacaacgagtttatcttttgctgattcaagtgcttcgtcgaactcttctatgctatgaactc |
8438370 |
T |
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| Q |
501 |
tttgaactcttgcatcttttttcttcttagcatctgaagctgctgtgcctgttgcttttgtgataacaacacgtcgtctctgct |
584 |
Q |
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| T |
8438371 |
tttgaactcttgcatcttttttcttcttagcatctgaagctgctgtgcctgttgctttggtgataacaacacgtcgtctctgct |
8438454 |
T |
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