View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10325_high_12 (Length: 284)

Name: NF10325_high_12
Description: NF10325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10325_high_12
NF10325_high_12
[»] chr3 (33 HSPs)
chr3 (20-250)||(3264152-3264377)
chr3 (20-250)||(36528501-36528730)
chr3 (52-247)||(14966801-14966997)
chr3 (52-243)||(52989097-52989289)
chr3 (47-88)||(15958760-15958801)
chr3 (43-88)||(21026152-21026197)
chr3 (25-85)||(16358226-16358286)
chr3 (28-74)||(13436653-13436699)
chr3 (46-88)||(17792870-17792912)
chr3 (46-88)||(19101310-19101352)
chr3 (28-74)||(41124293-41124339)
chr3 (28-74)||(46822615-46822661)
chr3 (28-73)||(20629955-20630000)
chr3 (29-74)||(29544604-29544649)
chr3 (25-74)||(55319066-55319115)
chr3 (52-88)||(3264502-3264538)
chr3 (25-77)||(26055024-26055076)
chr3 (36-74)||(10557270-10557308)
chr3 (35-73)||(10557462-10557500)
chr3 (28-74)||(12119416-12119462)
chr3 (28-74)||(12567913-12567959)
chr3 (28-74)||(13544377-13544423)
chr3 (28-74)||(15412785-15412831)
chr3 (28-74)||(16282520-16282566)
chr3 (52-102)||(21025977-21026027)
chr3 (28-74)||(53301266-53301312)
chr3 (28-74)||(54521176-54521222)
chr3 (25-74)||(10379678-10379727)
chr3 (25-74)||(13937542-13937591)
chr3 (25-74)||(24514027-24514076)
chr3 (25-74)||(27165796-27165845)
chr3 (25-74)||(38961407-38961456)
chr3 (25-73)||(8500064-8500112)
[»] chr4 (30 HSPs)
chr4 (25-250)||(14185679-14185904)
chr4 (52-250)||(10057296-10057495)
chr4 (46-238)||(20872477-20872663)
chr4 (46-123)||(9886553-9886630)
chr4 (46-102)||(18321772-18321828)
chr4 (46-102)||(18453118-18453174)
chr4 (137-237)||(22201181-22201281)
chr4 (28-74)||(14970469-14970515)
chr4 (28-74)||(15534535-15534581)
chr4 (28-73)||(3515361-3515406)
chr4 (25-74)||(18214773-18214822)
chr4 (25-73)||(14970277-14970325)
chr4 (25-73)||(52313105-52313153)
chr4 (35-74)||(3515561-3515600)
chr4 (58-101)||(16283500-16283543)
chr4 (35-74)||(19617636-19617675)
chr4 (35-73)||(362734-362772)
chr4 (35-73)||(15495937-15495975)
chr4 (46-88)||(17338311-17338353)
chr4 (28-74)||(19857932-19857978)
chr4 (28-74)||(36038224-36038270)
chr4 (28-74)||(49547536-49547582)
chr4 (28-74)||(52872835-52872881)
chr4 (25-74)||(362917-362966)
chr4 (28-77)||(1837279-1837328)
chr4 (28-77)||(14048931-14048980)
chr4 (25-74)||(52313298-52313347)
chr4 (46-98)||(9610935-9610987)
chr4 (25-73)||(15495744-15495792)
chr4 (25-73)||(19858122-19858170)
[»] scaffold0153 (2 HSPs)
scaffold0153 (52-250)||(11941-12140)
scaffold0153 (52-250)||(4921-5120)
[»] scaffold0686 (1 HSPs)
scaffold0686 (52-250)||(1060-1259)
[»] scaffold0032 (1 HSPs)
scaffold0032 (55-250)||(67921-68117)
[»] chr2 (38 HSPs)
chr2 (52-250)||(20915929-20916128)
chr2 (52-250)||(27473077-27473276)
chr2 (52-250)||(34858424-34858623)
chr2 (52-250)||(34873486-34873685)
chr2 (46-239)||(22497454-22497640)
chr2 (46-87)||(23652374-23652415)
chr2 (25-72)||(23709104-23709151)
chr2 (52-107)||(29638909-29638964)
chr2 (28-74)||(10684525-10684571)
chr2 (28-74)||(20261573-20261619)
chr2 (28-74)||(22105819-22105865)
chr2 (20-74)||(24529116-24529170)
chr2 (25-74)||(6726591-6726640)
chr2 (25-74)||(21154577-21154626)
chr2 (28-77)||(24918494-24918543)
chr2 (25-74)||(32214499-32214548)
chr2 (52-88)||(21554511-21554547)
chr2 (35-74)||(21154384-21154423)
chr2 (35-74)||(24368380-24368419)
chr2 (51-97)||(18985618-18985664)
chr2 (28-74)||(21154770-21154816)
chr2 (35-73)||(22106019-22106057)
chr2 (28-74)||(23131216-23131262)
chr2 (28-74)||(23133683-23133729)
chr2 (28-74)||(24368180-24368226)
chr2 (52-102)||(24788053-24788103)
chr2 (25-75)||(25616532-25616582)
chr2 (28-74)||(28577452-28577498)
chr2 (28-74)||(34402284-34402330)
chr2 (28-73)||(23706980-23707025)
chr2 (28-73)||(23931814-23931859)
chr2 (28-73)||(24529310-24529355)
chr2 (28-73)||(24642512-24642557)
chr2 (36-77)||(24907867-24907908)
chr2 (28-73)||(32214694-32214739)
chr2 (25-74)||(41523449-41523498)
chr2 (46-82)||(22497873-22497909)
chr2 (25-73)||(45027475-45027523)
[»] chr7 (23 HSPs)
chr7 (52-250)||(11091268-11091467)
chr7 (52-250)||(46579953-46580152)
chr7 (52-182)||(48812662-48812792)
chr7 (28-77)||(10500987-10501036)
chr7 (25-74)||(38897797-38897846)
chr7 (46-89)||(12346623-12346666)
chr7 (28-74)||(11303601-11303647)
chr7 (28-74)||(14156648-14156694)
chr7 (28-74)||(23664715-23664761)
chr7 (28-74)||(29796964-29797010)
chr7 (28-74)||(29800783-29800829)
chr7 (28-73)||(10501157-10501202)
chr7 (25-74)||(15081411-15081460)
chr7 (28-73)||(16214038-16214083)
chr7 (25-73)||(8940827-8940875)
chr7 (35-74)||(8941030-8941069)
chr7 (28-74)||(8940633-8940679)
chr7 (28-74)||(13869702-13869748)
chr7 (28-74)||(16108451-16108497)
chr7 (25-74)||(14269526-14269575)
chr7 (28-73)||(15081605-15081650)
chr7 (25-70)||(16214228-16214273)
chr7 (29-73)||(14269334-14269378)
[»] scaffold0395 (1 HSPs)
scaffold0395 (52-249)||(11521-11719)
[»] scaffold0174 (1 HSPs)
scaffold0174 (52-250)||(13258-13457)
[»] chr6 (21 HSPs)
chr6 (52-250)||(20733476-20733675)
chr6 (52-250)||(27851827-27852026)
chr6 (28-74)||(1598410-1598456)
chr6 (28-74)||(26924403-26924449)
chr6 (28-74)||(30676472-30676518)
chr6 (28-77)||(34963727-34963776)
chr6 (35-74)||(1598610-1598649)
chr6 (26-77)||(27557074-27557125)
chr6 (28-74)||(15892171-15892217)
chr6 (28-74)||(17377610-17377656)
chr6 (28-74)||(22782580-22782626)
chr6 (28-74)||(25535761-25535807)
chr6 (28-74)||(25688856-25688902)
chr6 (35-73)||(25689056-25689094)
chr6 (25-74)||(1927-1976)
chr6 (25-74)||(8886-8935)
chr6 (25-74)||(23415315-23415364)
chr6 (28-73)||(28289100-28289145)
chr6 (25-73)||(25737186-25737234)
chr6 (46-90)||(28842165-28842209)
chr6 (25-73)||(30676280-30676328)
[»] chr8 (28 HSPs)
chr8 (52-249)||(22237283-22237481)
chr8 (52-250)||(21321380-21321578)
chr8 (52-250)||(19807626-19807825)
chr8 (52-250)||(21325978-21326176)
chr8 (25-91)||(16401284-16401350)
chr8 (28-74)||(16401687-16401733)
chr8 (28-74)||(19896868-19896914)
chr8 (28-74)||(27472179-27472225)
chr8 (28-74)||(45290404-45290450)
chr8 (25-74)||(15071104-15071153)
chr8 (36-77)||(25657912-25657953)
chr8 (28-73)||(45290311-45290356)
chr8 (25-73)||(19897058-19897106)
chr8 (35-74)||(32122282-32122321)
chr8 (28-74)||(4483634-4483680)
chr8 (46-88)||(9798924-9798966)
chr8 (28-74)||(14824128-14824174)
chr8 (28-74)||(15070914-15070960)
chr8 (28-74)||(16198248-16198294)
chr8 (28-74)||(16401494-16401540)
chr8 (28-74)||(18677827-18677873)
chr8 (28-74)||(24485806-24485852)
chr8 (28-73)||(15202942-15202987)
chr8 (28-73)||(24048964-24049009)
chr8 (25-74)||(27471986-27472035)
chr8 (28-73)||(38549768-38549813)
chr8 (25-73)||(15202556-15202604)
chr8 (25-73)||(20403823-20403871)
[»] scaffold0074 (2 HSPs)
scaffold0074 (52-250)||(1559-1758)
scaffold0074 (28-74)||(38418-38464)
[»] chr5 (26 HSPs)
chr5 (52-239)||(32948472-32948653)
chr5 (52-239)||(25581593-25581773)
chr5 (46-207)||(13938625-13938779)
chr5 (28-77)||(20901680-20901729)
chr5 (52-99)||(24144373-24144420)
chr5 (146-239)||(24564665-24564758)
chr5 (146-239)||(24605700-24605793)
chr5 (25-73)||(29330526-29330574)
chr5 (28-74)||(17516926-17516972)
chr5 (28-74)||(32027799-32027845)
chr5 (28-74)||(38619790-38619836)
chr5 (28-74)||(39363738-39363784)
chr5 (35-74)||(17516540-17516579)
chr5 (35-74)||(32028193-32028232)
chr5 (28-74)||(20917609-20917655)
chr5 (46-88)||(24144200-24144242)
chr5 (28-74)||(37804665-37804711)
chr5 (28-74)||(42245128-42245174)
chr5 (28-73)||(264532-264577)
chr5 (28-77)||(295841-295890)
chr5 (25-74)||(17516733-17516782)
chr5 (51-116)||(24564581-24564646)
chr5 (51-116)||(24605616-24605681)
chr5 (46-83)||(25581933-25581970)
chr5 (25-73)||(296038-296086)
chr5 (47-91)||(23908673-23908717)
[»] chr1 (15 HSPs)
chr1 (172-250)||(21995896-21995975)
chr1 (46-124)||(17451124-17451202)
chr1 (28-74)||(15859771-15859817)
chr1 (28-77)||(22122774-22122823)
chr1 (25-74)||(29298785-29298834)
chr1 (46-90)||(23034857-23034901)
chr1 (28-74)||(21841120-21841166)
chr1 (35-73)||(22122585-22122623)
chr1 (20-74)||(23593496-23593550)
chr1 (28-74)||(27161349-27161395)
chr1 (52-90)||(35764317-35764355)
chr1 (43-88)||(29777109-29777154)
chr1 (25-74)||(31613102-31613151)
chr1 (54-102)||(31343559-31343607)
chr1 (52-88)||(31343715-31343751)
[»] scaffold0207 (2 HSPs)
scaffold0207 (55-177)||(1063-1179)
scaffold0207 (46-83)||(1342-1379)
[»] scaffold0364 (1 HSPs)
scaffold0364 (52-226)||(14241-14409)
[»] scaffold0381 (1 HSPs)
scaffold0381 (46-123)||(11914-11991)
[»] scaffold0747 (2 HSPs)
scaffold0747 (19-74)||(934-989)
scaffold0747 (21-74)||(1249-1301)
[»] scaffold0043 (3 HSPs)
scaffold0043 (35-74)||(10345-10384)
scaffold0043 (28-74)||(10145-10191)
scaffold0043 (25-74)||(10528-10577)
[»] scaffold1427 (1 HSPs)
scaffold1427 (28-74)||(1782-1828)
[»] scaffold0741 (2 HSPs)
scaffold0741 (35-77)||(3676-3718)
scaffold0741 (28-77)||(4062-4111)
[»] scaffold0574 (2 HSPs)
scaffold0574 (28-74)||(6805-6851)
scaffold0574 (20-74)||(6990-7044)
[»] scaffold0422 (1 HSPs)
scaffold0422 (28-74)||(3377-3423)
[»] scaffold0317 (2 HSPs)
scaffold0317 (20-74)||(6505-6559)
scaffold0317 (35-74)||(6698-6737)
[»] scaffold0306 (3 HSPs)
scaffold0306 (20-74)||(10909-10963)
scaffold0306 (35-74)||(11102-11141)
scaffold0306 (25-74)||(15273-15322)
[»] scaffold0151 (1 HSPs)
scaffold0151 (25-74)||(36961-37010)
[»] scaffold0022 (1 HSPs)
scaffold0022 (25-74)||(53634-53683)
[»] scaffold0716 (1 HSPs)
scaffold0716 (25-77)||(5238-5290)
[»] scaffold0138 (1 HSPs)
scaffold0138 (26-73)||(33523-33570)
[»] scaffold0001 (1 HSPs)
scaffold0001 (35-74)||(501618-501657)
[»] scaffold1296 (1 HSPs)
scaffold1296 (28-74)||(1801-1847)
[»] scaffold0695 (1 HSPs)
scaffold0695 (28-74)||(6300-6346)
[»] scaffold0494 (1 HSPs)
scaffold0494 (28-74)||(286-332)
[»] scaffold0436 (1 HSPs)
scaffold0436 (43-77)||(8387-8421)
[»] scaffold0290 (2 HSPs)
scaffold0290 (51-97)||(12238-12284)
scaffold0290 (46-87)||(12613-12654)
[»] scaffold0278 (1 HSPs)
scaffold0278 (28-74)||(8093-8139)
[»] scaffold0040 (1 HSPs)
scaffold0040 (28-74)||(43093-43139)
[»] scaffold0023 (1 HSPs)
scaffold0023 (28-74)||(94764-94810)
[»] scaffold1792 (2 HSPs)
scaffold1792 (28-73)||(561-606)
scaffold1792 (25-73)||(911-959)
[»] scaffold0230 (2 HSPs)
scaffold0230 (28-73)||(23294-23339)
scaffold0230 (25-73)||(22941-22989)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-77)||(113370-113419)
[»] scaffold0293 (1 HSPs)
scaffold0293 (25-73)||(19852-19900)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 5e-99; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 3264377 - 3264152
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3264377 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactg 3264278  T
Q  120 agacaataaaaacacattttgcacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatact 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |      ||  ||||||||||||||||||||||    
T  3264277 agacaataaaaactcattttgcacactgacagcaaaatcgcagttcagctgcgatttcgcctttggaa-----cttaaactccgttttcgacccaatact 3264183  T
Q  220 ctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||| |||||||||||||||||||||||    
T  3264182 ctccaaacttgaccctaatcattaccctatg 3264152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 20 - 250
Target Start/End: Original strand, 36528501 - 36528730
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactg 119  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||| ||   |||||||||||||||| ||||||||||||||||||||||    
T  36528501 atttagacgtcaaaccaatggcattagaaagctaacatccatacctacaactttcgtgtttacacctaaacccagtttggaacttaaacttgtcaaactg 36528600  T
Q  120 agacaataaaaacacattttgcacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatact 219  Q
    ||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||| ||||    
T  36528601 agacaataaaa-cgcgttttgaacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatattttcgattccgttttcgatccattact 36528699  T
Q  220 ctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||  ||||||||||||||||||||||    
T  36528700 ctccaaacatgaccctaatcattaccctatg 36528730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 52 - 247
Target Start/End: Original strand, 14966801 - 14966997
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  |||||||||  ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  14966801 taacatccatatatacaacttttgtgaaggcaccttaacccagttcgaaacttaaacttgtcaaaatgagacaataaaaacgcgttttgcacactaacag 14966900  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccct 247  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  14966901 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaatcattaccct 14966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 52989289 - 52989097
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  52989289 taacatccatatctacaactttcgtgaaggcacctaaatccagttcgaaacttaaacttgtcaaactgagactataaaaacacgttttgcacactgacag 52989190  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcatta 243  Q
    |||||||| ||||||| |||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||    
T  52989189 caaaatcgtagttcagttgcgatttcgcctttgggaaaatcttttcgactctgttttcgatccaatactctccaaacatgaccctaatcatta 52989097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 15958801 - 15958760
Alignment:
Q  47 aaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15958801 aaatctaacatccatacctacaactttcatgaagacacctaa 15958760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 21026152 - 21026197
Alignment:
Q  43 ttagaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  21026152 ttagaaatctaacatccatacctacaactttcatgaagacccctaa 21026197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 16358286 - 16358226
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacc 85  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||||||| ||||||||||    
T  16358286 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttcgtgaagacacc 16358226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 13436653 - 13436699
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  13436653 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 13436699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 17792870 - 17792912
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  17792870 gaaaactaacatccatacctaaaactttcatgaagacacctaa 17792912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 19101310 - 19101352
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  19101310 gaaaactaacatccatacctaaaactttcatgaagacacctaa 19101352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 41124293 - 41124339
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  41124293 gtcaaatcaacggcattagaaagctaacattcatacctacaactttc 41124339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 46822615 - 46822661
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  46822615 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 46822661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 20630000 - 20629955
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  20630000 gtcaaaccaacggcattagaaagctaacatccatacctacaacttt 20629955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 29544649 - 29544604
Alignment:
Q  29 tcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29544649 tcaaaccaacggcattagaaagctaacatccatacctacaactttc 29544604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 55319115 - 55319066
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  55319115 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 55319066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 3264538 - 3264502
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaa 88  Q
    ||||||||||||||||||||||| |||||||||||||    
T  3264538 taacatccatacctacaactttcgtgaagacacctaa 3264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 26055076 - 26055024
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    ||||||| | ||| ||| ||||||| |||||||||||||||||||||||||||    
T  26055076 gacgtcagaccaaaggcattagaaagctaacatccatacctacaactttcatg 26055024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 10557270 - 10557308
Alignment:
Q  36 aacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  10557270 aacggcattagaaagctaacatccatacctacaactttc 10557308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 10557462 - 10557500
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  10557462 caacggcattagaaagctaacatccatacctacaacttt 10557500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 12119462 - 12119416
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  12119462 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 12119416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 12567913 - 12567959
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  12567913 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 12567959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 13544377 - 13544423
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  13544377 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 13544423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15412785 - 15412831
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  15412785 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 15412831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 16282566 - 16282520
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||| ||| ||||||||||||||| ||||||||||||||||    
T  16282566 gtcaaaccaatggcattagaaatctaacattcatacctacaactttc 16282520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 21025977 - 21026027
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaac 102  Q
    |||||||||||||||||||||||||| | ||||||| | ||| ||||||||    
T  21025977 taacatccatacctacaactttcatggatacacctatatccaattcggaac 21026027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 53301312 - 53301266
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  53301312 gtcaaaccaacggcattagaaagctaatatccatacctacaactttc 53301266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 54521176 - 54521222
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| |||||||||||||| |||||||||    
T  54521176 gtcaaaccaacggcattagaaagctaacatccatacccacaactttc 54521222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 10379678 - 10379727
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  10379678 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 10379727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 13937591 - 13937542
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  13937591 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 13937542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 24514027 - 24514076
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  24514027 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 24514076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 27165796 - 27165845
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||| ||||||||||||||||    
T  27165796 gacgtcagaccaacggcattagaaagctaacatacatacctacaactttc 27165845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 38961456 - 38961407
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  38961456 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 38961407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 8500064 - 8500112
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| |||||||| ||||||||||||||    
T  8500064 gacgtcagaccaacggcattagaaagctaacatctatacctacaacttt 8500112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 250
Target Start/End: Original strand, 14185679 - 14185904
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagaca 124  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| || |||||||||||||||||||||||    
T  14185679 gacgtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgaagactcctaaacccagttcagaccttaaacttgtcaaactgagaca 14185778  T
Q  125 ataaaaacacattttgcacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctcca 224  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  14185779 ataaaaacgcgttttgcacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgacttcgttttcgatccaatactttcca 14185878  T
Q  225 aaattgaccctaatcattaccctatg 250  Q
    || |||||||||||||||||||||||    
T  14185879 aacttgaccctaatcattaccctatg 14185904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 10057296 - 10057495
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| | ||| ||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  10057296 taacatccatatctacaactttcgttaaggcacctaaacccagttcgaaatttaaacttgtcaaactgagacaataaaaacgcgttttgcacactgacag 10057395  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||  | ||| ||||||||||||||||    
T  10057396 caaaatcgcagttcagttgcgatttcgcctttggggaaatcttttcgactccgttttcgatccgatactctccaaacataaccataatcattaccctatg 10057495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 238
Target Start/End: Complemental strand, 20872663 - 20872477
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacac 145  Q
    |||| |||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||| || ||     ||||      
T  20872663 gaaacctaacatccatatctacaatgttcatgaagacacctaaacccaattcagaacttaaacttgtcaaactaagagagtaagaa-ac-----gcacgg 20872570  T
Q  146 tgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaat 238  Q
    |||||||||||| ||||||  ||||||||||||| ||||||||  |||||||||||||||||||| |   ||||||||||| | |||||||||    
T  20872569 tgacagcaaaattgcagttgtgctgcgatttcgctttggggaacccttttcgactccgttttcgatcatgtactctccaaactcgaccctaat 20872477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 9886553 - 9886630
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagac 123  Q
    |||| |||||||||||| |||||| ||| || |||||||||||||||| |||  |||||||||||| |||||||||||    
T  9886553 gaaaactaacatccatatctacaaattttataaagacacctaaacccaattcataacttaaacttgccaaactgagac 9886630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 18321828 - 18321772
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaac 102  Q
    |||| |||||||||||| |||||| ||||||||||||||||||| ||| ||||||||    
T  18321828 gaaagctaacatccatatctacaattttcatgaagacacctaaatccaattcggaac 18321772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 18453118 - 18453174
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaac 102  Q
    |||| |||||||||||| |||||| ||||||||||||||||||| ||| ||||||||    
T  18453118 gaaagctaacatccatatctacaattttcatgaagacacctaaatccaattcggaac 18453174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 22201181 - 22201281
Alignment:
Q  137 tttgcacactgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgacccta 236  Q
    |||||||| ||||| ||||||||| |||  |||| ||||| ||||| ||| |  ||||||||||||||||||||    |||||||||||| |||||||||    
T  22201181 tttgcacagtgacaacaaaatcgcggttttgctgtgattttgccttaggggacccttttcgactccgttttcgattatatactctccaaacttgacccta 22201280  T
Q  237 a 237  Q
    |    
T  22201281 a 22201281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 14970515 - 14970469
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  14970515 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 14970469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15534535 - 15534581
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  15534535 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 15534581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 3515361 - 3515406
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  3515361 gtcaaaccaacggcattagaaagctaacatccatacctacaacttt 3515406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 18214822 - 18214773
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  18214822 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 18214773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 14970325 - 14970277
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||||||    
T  14970325 gacgtcagaccaacggcattagaaagctaacatccatacctacaacttt 14970277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 52313105 - 52313153
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||| ||| |||||||||||||||||||||||||||||||    
T  52313105 gacgtcataccaaaggcattagaaatctaacatccatacctacaacttt 52313153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 3515561 - 3515600
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  3515561 caacggcattagaaagctaacatccatacctacaactttc 3515600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 16283543 - 16283500
Alignment:
Q  58 ccatacctacaactttcatgaagacacctaaacccagttcggaa 101  Q
    ||||||||||||||||||||||||||||||| | || |||||||    
T  16283543 ccatacctacaactttcatgaagacacctaagctcaattcggaa 16283500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 19617675 - 19617636
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  19617675 caacggcattagaaagctaacatccatacctacaactttc 19617636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 362734 - 362772
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  362734 caacggcattagaaagctaacatccatacctacaacttt 362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 15495975 - 15495937
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  15495975 caacggcattagaaagctaacatccatacctacaacttt 15495937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 17338311 - 17338353
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||| |||||||||||| |||||||||||||||||||| ||||    
T  17338311 gaaagctaacatccatatctacaactttcatgaagacatctaa 17338353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 19857932 - 19857978
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  19857932 gtcaaaccaacggcattagaaagctaacatacatacctacaactttc 19857978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 36038224 - 36038270
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  36038224 gtcaaaccaacggtattagaaagctaacatccatacctacaactttc 36038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 49547582 - 49547536
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||| ||||    
T  49547582 gtcaaaccaacggcattagaaagctaacatccatacctacaaatttc 49547536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 52872881 - 52872835
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  52872881 gtcaaaccaacggcattagaaagctagcatccatacctacaactttc 52872835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 362917 - 362966
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  362917 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 362966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 1837328 - 1837279
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| ||||||| |||||||  ||||||||||||||||||    
T  1837328 gtcaaaccaacggcattagaaagctaacatttatacctacaactttcatg 1837279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 14048931 - 14048980
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| ||||||| ||||||| |||||| ||||||||||||    
T  14048931 gtcaaaccaacggcattagaaagctaacattcatacccacaactttcatg 14048980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 52313298 - 52313347
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| |||||||||||||||| |||||||    
T  52313298 gacgtcagaccaacggcattagaaagctaacatccatacctataactttc 52313347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 9610935 - 9610987
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcg 98  Q
    ||||| || |||||||| ||||||||||||| ||||||| |||||||| ||||    
T  9610935 gaaatatagcatccatatctacaactttcattaagacacataaacccaattcg 9610987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 15495792 - 15495744
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||||||    
T  15495792 gacgtcagaccaacgacattagaaagctaacatccatacctacaacttt 15495744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 19858122 - 19858170
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||||||    
T  19858122 gacgtcagaccaacgacattagaaagctaacatccatacctacaacttt 19858170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 11941 - 12140
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  11941 taacatccatatctacaactttcgtgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgtgttttgcacactgacag 12040  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  12041 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaatcattaccctatg 12140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 4921 - 5120
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||   |||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  4921 taacatccatatctacaactttcgtgaaagaacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgtgttttgcacactgacag 5020  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||    
T  5021 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccattttcgatccaatactctccaaacatgaccctaatcattaccctatg 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 1060 - 1259
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  1060 taacatccatgtctacaactttcgtgaagacacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgcgttttgcacactgacag 1159  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||    
T  1160 caaagtcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatacaatactctccaaacatgaccctaatcattaccctatg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 67921 - 68117
Alignment:
Q  55 catccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacagcaa 154  Q
    ||||||||  |||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  67921 catccatatatacaactttcgtgaaggcacctaaatccagttcgaaacttaaacttgtcaaactgagacaataaaaacacgttttgcacactgacagcaa 68020  T
Q  155 aatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  68021 aatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaattattaccctatg 68117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 9e-76; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 20915929 - 20916128
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  20915929 taacatccatatctacaacttttgtgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaatgcgttttgcacactgacag 20916028  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  20916029 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgaatccgttttcgatccaatactctccaaacctgaccctaatcattaccctatg 20916128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 27473077 - 27473276
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| |||||| |||| ||||| |||||||||| |||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  27473077 taacatccatatctacaaatttcgtgaaggcacctaaacctagtttgaaacttaaacttgtcaaactgagacaataaaaacgcgttttgcacactgacag 27473176  T
Q  152 caaaatcgcagttcagctgcgatttcgc-cttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  27473177 caaaatcgcagttcagctgcgatttcgcttttggggaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaatcattaccctatg 27473276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 34858623 - 34858424
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||| || ||    
T  34858623 taacatccatatgtacaacttttatgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgtgttttgcacaccgaaag 34858524  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||    
T  34858523 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatacaatactctccaaacatgaccctaatcattaccctatg 34858424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 34873685 - 34873486
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  ||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||| || ||    
T  34873685 taacatccatatgtacaacttttatgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgtgttttgcacaccgaaag 34873586  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||||||||||    
T  34873585 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatacaatactctccaaacatgaccctaatcattaccctatg 34873486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 239
Target Start/End: Complemental strand, 22497640 - 22497454
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtc-aaactgagacaataaaaacacattttgcaca 144  Q
    |||| |||||| ||||| ||||||||||||||||||||| ||| |||| ||  ||||||||||| ||| |||| ||||||||||||| ||     ||||     
T  22497640 gaaagctaacaaccatatctacaactttcatgaagacacgtaa-cccaatttagaacttaaact-gtcgaaaccgagacaataaaaa-ac-----gcacg 22497549  T
Q  145 ctgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatc 239  Q
     |||||||||||| | |||||||||||||||| |||||| ||||  ||||| ||||| ||||| || || |||||||||||||| ||||||||||    
T  22497548 gtgacagcaaaattgtagttcagctgcgattttgccttgaggaaccctttttgactctgtttttgatcctatactctccaaaatcgaccctaatc 22497454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 23652415 - 23652374
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacaccta 87  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  23652415 gaaatctaacatccatacctacaactttcatgaagataccta 23652374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 23709151 - 23709104
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactt 72  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  23709151 gacgtcagaccaacggcattagaaatctaacatccatacctacaactt 23709104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 29638909 - 29638964
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaa 107  Q
    ||||||||| | |||||||||||||||| ||||||||||||| |||||||| ||||    
T  29638909 taacatccacatctacaactttcatgaatacacctaaacccaattcggaacataaa 29638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 10684571 - 10684525
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  10684571 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 10684525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 20261573 - 20261619
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  20261573 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 20261619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 22105819 - 22105865
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  22105819 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 22105865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 24529170 - 24529116
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||| ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  24529170 attttgacgtcataccaacggcattagaaagctaacatccatacctacaactttc 24529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 6726591 - 6726640
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  6726591 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 6726640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 21154626 - 21154577
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  21154626 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 21154577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 24918494 - 24918543
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  24918494 gtcaaaccaacggaattagaaagctaacatccatacctacaactttcatg 24918543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 32214548 - 32214499
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  32214548 gacgtcagagcaacggcattagaaagctaacatccatacctacaactttc 32214499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 21554547 - 21554511
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaa 88  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21554547 taacatcaatacctacaactttcatgaagacacctaa 21554511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 21154423 - 21154384
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  21154423 caacggcattagaaagctaacatccatacctacaactttc 21154384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 24368380 - 24368419
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  24368380 caacggcattagaaagctaacatccatacctacaactttc 24368419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 18985664 - 18985618
Alignment:
Q  51 ctaacatccatacctacaactttcatgaagacacctaaacccagttc 97  Q
    ||||||| |||| |||||||||||||||||||||| ||||| |||||    
T  18985664 ctaacattcatatctacaactttcatgaagacaccgaaacctagttc 18985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 21154816 - 21154770
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  21154816 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 21154770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 22106019 - 22106057
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  22106019 caacggcattagaaagctaacatccatacctacaacttt 22106057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 23131216 - 23131262
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  23131216 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 23131262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 23133683 - 23133729
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  23133683 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 23133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 24368180 - 24368226
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  24368180 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 24368226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 24788053 - 24788103
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaac 102  Q
    ||||||||||||||||||||||||||   ||||| | ||||||||||||||    
T  24788053 taacatccatacctacaactttcatgtttacaccaatacccagttcggaac 24788103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 25616532 - 25616582
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttca 75  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||||||||    
T  25616532 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttca 25616582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 28577452 - 28577498
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  28577452 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 28577498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 34402330 - 34402284
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  34402330 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 34402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 23707025 - 23706980
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||  ||||||| |||||||||||||||||||||||    
T  23707025 gtcaaaccaacggaattagaaagctaacatccatacctacaacttt 23706980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 23931814 - 23931859
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  23931814 gtcaaaccaacggcattagaaagctaacatcaatacctacaacttt 23931859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 24529355 - 24529310
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| |||||||  ||||||||||||||||||||||    
T  24529355 gtcaaaccaacggcattagaaaggtaacatccatacctacaacttt 24529310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 24642557 - 24642512
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||    
T  24642557 gtcaaaccaacgacattagaaagctaacatccatacctacaacttt 24642512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 24907908 - 24907867
Alignment:
Q  36 aacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| ||||||| |||||||||||||||||||    
T  24907908 aacggcattagaaagctaacattcatacctacaactttcatg 24907867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 32214739 - 32214694
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||| ||| ||||||| |||||||||||||||||||||||    
T  32214739 gtcaaaccaatggcattagaaagctaacatccatacctacaacttt 32214694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 41523498 - 41523449
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  41523498 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 41523449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 22497909 - 22497873
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagac 82  Q
    |||||||||||||||||  ||||||||||||||||||    
T  22497909 gaaatctaacatccatatttacaactttcatgaagac 22497873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 45027523 - 45027475
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||| | || ||||||||||||||||||||||||||||    
T  45027523 gacgtcagaccaacgacattcgaaatctaacatccatacctacaacttt 45027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 5e-71; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 11091268 - 11091467
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| |||||||||| | ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11091268 taacatccatatctacaacttttacgaagaaacctaaacccatttcgaaacttaaacttgtcaaactgagacaataaaaacgcattttgcacactgacag 11091367  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||||| |||||||||||||||  ||||||||||||||||||||||    
T  11091368 caaaatcgtagttcagctgcgatttcgcctttgaggaaatcttttcaactccattttcgatccaatactctccaaacatgaccctaatcattaccctatg 11091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 46580152 - 46579953
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||||||  || |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  46580152 taacatccatatctacaacttttgtgaaggcacctaaacccagttcaaaagttaaacttgtcaaactgagacaataaaaacgcgttttgcacactgacag 46580053  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  46580052 caaaatcgcagttcagctgcgatttcgcctttgggtaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaataattaccctatg 46579953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 48812662 - 48812792
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||  | ||||||||| | |||     
T  48812662 taacatccatatctacaacttttgtgaaggcacctaaacccagttcgaaacttaaacttgtcaaattgagacaataaaaatgcgttttgcacattaacaa 48812761  T
Q  152 caaaatcgcagttcagctgcgatttcgcctt 182  Q
    |||||||||||||||||||||||||| ||||    
T  48812762 caaaatcgcagttcagctgcgatttcacctt 48812792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 10501036 - 10500987
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||||||    
T  10501036 gtcaaaccaacggcattagaaagctaacatccatacctacaactttcatg 10500987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 38897846 - 38897797
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  38897846 gacgtcaaaccaacggcattagaaagctaacatccatacctacaactttc 38897797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 12346666 - 12346623
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaa 89  Q
    |||||||||||| |||| ||||||||||||||||||||||||||    
T  12346666 gaaatctaacatacatatctacaactttcatgaagacacctaaa 12346623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 11303601 - 11303647
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  11303601 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 11303647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 14156694 - 14156648
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  14156694 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 14156648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 23664761 - 23664715
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  23664761 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 23664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 29796964 - 29797010
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29796964 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 29797010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 29800783 - 29800829
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29800783 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 29800829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 10501202 - 10501157
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||| | |||||||||||||||||||||||||||||||    
T  10501202 gtcaaaccaacgacattagaaatctaacatccatacctacaacttt 10501157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 15081460 - 15081411
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  15081460 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 15081411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 16214038 - 16214083
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  16214038 gtcaaaccaacggcattagaaagctaacatccatacctacaacttt 16214083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 8940827 - 8940875
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||||||    
T  8940827 gacgtcagaccaacggcattagaaagctaacatccatacctacaacttt 8940875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 8941030 - 8941069
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  8941030 caacggcattagaaagctaacatccatacctacaactttc 8941069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 8940633 - 8940679
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  8940633 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 8940679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 13869702 - 13869748
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  13869702 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 13869748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 16108497 - 16108451
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||| || ||||||| ||||||||||||||||||||||||    
T  16108497 gtcaaaccaacagcattagaaaactaacatccatacctacaactttc 16108451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 14269575 - 14269526
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||| ||| ||||||| ||||||||||||||||||||||||    
T  14269575 gacgtcataccaaaggcattagaaagctaacatccatacctacaactttc 14269526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15081650 - 15081605
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  15081650 gtcaaaccaacggcattagaaagctaacattcatacctacaacttt 15081605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 16214228 - 16214273
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaac 70  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||    
T  16214228 gacgtcataccaacggcattagaaagctaacatccatacctacaac 16214273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 14269378 - 14269334
Alignment:
Q  29 tcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||| ||||||  ||||||| |||||||||||||||||||||||    
T  14269378 tcaaaccaacggaattagaaagctaacatccatacctacaacttt 14269334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 52 - 249
Target Start/End: Original strand, 11521 - 11719
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||   ||||||||||||| |     
T  11521 taacatccatatctacaactttcgtgaaggcacctaaacccagttcgaaacctaaacttgtcaaactgagacaataaaaacgtgttttgcacactgatat 11620  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctat 249  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||    
T  11621 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatccaatattctccaaacatgaccctaatcattaccctat 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 13258 - 13457
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||   |||||||||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||||     
T  13258 taacatccatatctacaactttcgtgaaagaacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgtgttttgcacactgacaa 13357  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||    
T  13358 caaaatcccagttcagctgcgatttcgcctttggggaaatcttttcgactcctttttcgatccaatactctccaaacatgaccctaatcattaccctatg 13457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 20733675 - 20733476
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||| || ||||||| |||||||||||||||||||||  | |||||||||| |||||    
T  20733675 taacatccatatctacaactttcgtgaaggcacctaaacccagttcgaaatttaaactcgtcaaactgagacaataaaaatgcgttttgcacaccgacag 20733576  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  20733575 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcaactccgttttcgatccaatactctccaaacatgaccctaatcattatcctatg 20733476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 27851827 - 27852026
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  |||||||||| ||| | ||||||||||||||||| |||||||||||||||||||| ||||||||||||   ||||||||| ||| ||    
T  27851827 taacatccatatatacaactttcgtgagggcacctaaacccagttcgaaacttaaacttgtcaaactgcgacaataaaaacgtgttttgcacattgatag 27851926  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  27851927 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaatcattaccctatg 27852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 1598410 - 1598456
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  1598410 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 1598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 26924449 - 26924403
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  26924449 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 26924403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 30676518 - 30676472
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  30676518 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 30676472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 34963727 - 34963776
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||||||    
T  34963727 gtcaaaccaacgacattagaaagctaacatccatacctacaactttcatg 34963776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 1598610 - 1598649
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  1598610 caacggcattagaaagctaacatccatacctacaactttc 1598649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 27557074 - 27557125
Alignment:
Q  26 acgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| | ||| ||| ||||||| |||||||||||||||||||||||||||    
T  27557074 acgtcagaccaatggcattagaaagctaacatccatacctacaactttcatg 27557125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 15892217 - 15892171
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  15892217 gtcaaaccaacggcattagaaagctagcatccatacctacaactttc 15892171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 17377656 - 17377610
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  17377656 gtcaaaccaatggcattagaaagctaacatccatacctacaactttc 17377610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 22782580 - 22782626
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  22782580 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 22782626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 25535761 - 25535807
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  25535761 gtcaaaccaacgacattagaaagctaacatccatacctacaactttc 25535807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 25688856 - 25688902
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  25688856 gtcaaaccaacggcattacaaagctaacatccatacctacaactttc 25688902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 25689056 - 25689094
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  25689056 caacggcattagaaagctaacatccatacctacaacttt 25689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 1976 - 1927
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  1976 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 1927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 8935 - 8886
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  8935 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 23415315 - 23415364
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||| ||| ||||||| ||||||||||||||||||||||||    
T  23415315 gacgtcagaccaatggcattagaaaactaacatccatacctacaactttc 23415364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 28289145 - 28289100
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||    
T  28289145 gtcaaaccaacgacattagaaagctaacatccatacctacaacttt 28289100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 25737186 - 25737234
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||||||    
T  25737186 gacgtcagaccaacgacattagaaagctaacatccatacctacaacttt 25737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 28842209 - 28842165
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaac 90  Q
    |||| ||||||||||||  ||||||||||| ||||||||||||||    
T  28842209 gaaagctaacatccatatatacaactttcaggaagacacctaaac 28842165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 30676328 - 30676280
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||  ||||||| |||||||||||||||||||||||    
T  30676328 gacgtcagagcaacggaattagaaagctaacatccatacctacaacttt 30676280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 52 - 249
Target Start/End: Complemental strand, 22237481 - 22237283
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||| |||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||  | | ||||||||||||||    
T  22237481 taacattcatatctacaactttcgtgaaggcacctaaacccagttcgaaacttaaatttgtcaaactgagacaataaaaatgcgtgttgcacactgacag 22237382  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctat 249  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||  |||||||||||||||||||||    
T  22237381 caaaatcgcagttcagctgggatttcgcctttggggaaatcttttcgactccgtttttgatccaatactctccaaacatgaccctaatcattaccctat 22237283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 21321578 - 21321380
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||| ||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |||||| ||||| | | ||||||||||||||    
T  21321578 taacatctatatctacaactttcgtgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgcgacaatgaaaacgcgtcttgcacactgacag 21321479  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||  |||||||||||| |||||||||    
T  21321478 caaaatcgcagttcagctgcgatttcgcctttggggaaatcttttcgactccgtgttcgatccaatactctccaaacatgaccctaatca-taccctatg 21321380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 19807825 - 19807626
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||||||| ||||||||||   |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||||    
T  19807825 taacatccatatctacaacttttgcgaaggcacctaaacccagttcgaaacttaaacttgtcaaactgagacaataaaaacgcgttttgcacattgacag 19807726  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||| |||||||| |||| |||||||| ||||  |||||||||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  19807725 caaaattgcagttcaactgcaatttcgcctttggaaaaatcttttcgactccgttttcgatccaatactctccaaacatgaccctaaccattaccctatg 19807626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 52 - 250
Target Start/End: Complemental strand, 21326176 - 21325978
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||| ||| ||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||| |||||| ||||| | | ||||||||| ||||    
T  21326176 taacatctatatctacaactttcgtgaaggcacctaaacccaattcgaaacttaaacttgtcaaactgcgacaatgaaaacgcgtcttgcacactaacag 21326077  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| |||||||||||||||  |||||||||||| |||||||||    
T  21326076 caaaatcgcagttcagctgcgattccgcctttgggaaaatcttttcgactccgtgttcgatccaatactctccaaacatgaccctaatca-taccctatg 21325978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 16401350 - 16401284
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatgaagacacctaaacc 91  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||   |||||||||||    
T  16401350 gacgtcaaaccaacggcattagaaagctaacatccatacctacaactttcgtgtttacacctaaacc 16401284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 16401733 - 16401687
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||||    
T  16401733 gtcaaaccaacggcattagaaatctaacatcaatacctacaactttc 16401687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 19896868 - 19896914
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  19896868 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 19896914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 27472225 - 27472179
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||| | ||||||||||||||||||||||||||||||||    
T  27472225 gtcaaaccaacgacattagaaatctaacatccatacctacaactttc 27472179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 45290450 - 45290404
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  45290450 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 45290404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 15071104 - 15071153
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  15071104 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 15071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 25657953 - 25657912
Alignment:
Q  36 aacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  25657953 aacggcattagaaagctaacatccatacctacaactttcatg 25657912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 45290356 - 45290311
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  45290356 gtcaaaccaacggcattagaaagctaacatccatacctacaacttt 45290311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 19897058 - 19897106
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||||||||||| |||||||||||||||    
T  19897058 gacgtcagaccaacggcattagaaatctaacattcatacctacaacttt 19897106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 32122282 - 32122321
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  32122282 caacggcattagaaagctaacatccatacctacaactttc 32122321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 4483634 - 4483680
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  4483634 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 4483680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 9798966 - 9798924
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||| ||||||| |||| |||||||||||||||||||||||||    
T  9798966 gaaagctaacattcatatctacaactttcatgaagacacctaa 9798924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 14824128 - 14824174
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  14824128 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 14824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 15070914 - 15070960
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  15070914 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 15070960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 16198248 - 16198294
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  16198248 gtcaaaccaacggcattagaaagctaatatccatacctacaactttc 16198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 16401540 - 16401494
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| || |||| ||||||||||||||||||||||||    
T  16401540 gtcaaaccaacggcgttggaaagctaacatccatacctacaactttc 16401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 18677873 - 18677827
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  18677873 gtcaaaccaacggcactagaaagctaacatccatacctacaactttc 18677827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 24485852 - 24485806
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  24485852 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 24485806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 15202987 - 15202942
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  15202987 gtcaaaccaacggcattagaaagctaacattcatacctacaacttt 15202942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 24048964 - 24049009
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||    
T  24048964 gtcaaaccaacgacattagaaagctaacatccatacctacaacttt 24049009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 27472035 - 27471986
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  27472035 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 27471986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 38549813 - 38549768
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||| | ||||||| |||||||||||||||||||||||    
T  38549813 gtcaaaccaacgacattagaaaactaacatccatacctacaacttt 38549768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 15202604 - 15202556
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||  ||||||| |||||||||||||||||||||||    
T  15202604 gacgtcagaccaacggtattagaaagctaacatccatacctacaacttt 15202556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 20403823 - 20403871
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| ||||||| |||||||||||||||    
T  20403823 gacgtcagaccaacggcattagaaagctaacattcatacctacaacttt 20403871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 52 - 250
Target Start/End: Original strand, 1559 - 1758
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    ||||||| ||| ||||||||||| |||||  ||||||| |||||||| |||||||||||||||||||||||||||||| || | ||||||||||||||||    
T  1559 taacatctatatctacaactttcgtgaaggtacctaaatccagttcgaaacttaaacttgtcaaactgagacaataaacacgccttttgcacactgacag 1658  T
Q  152 caaaatcgcagttcagctgcgatttcgcc-ttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    |||||||||||||||||||||||| |||| || ||||||||||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  1659 caaaatcgcagttcagctgcgattccgcctttagggaaatcttttcgactacgttttcgatccaatactctccaaacatgaccctaatcattaccctatg 1758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 38464 - 38418
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  38464 gtcaaaccaacgacattagaaagctaacatccatacctacaactttc 38418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 239
Target Start/End: Original strand, 32948472 - 32948653
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  |||| |||||||||||||| |||||| |||||||||||||||||||||||||  |||||| ||| || |||     |||| ||||||    
T  32948472 taacatccatatatacatctttcatgaagacatctaaactcagttcggaacttaaacttgtcaaatagagacagtaagaa-aca-----cacagtgacag 32948565  T
Q  152 caaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatc 239  Q
    |||||||||||||| ||||||||||| | ||||||||  |||||| |||  ||||| || |  |||||||||||| | ||||||||||    
T  32948566 caaaatcgcagttctgctgcgatttcactttggggaacccttttctactttgtttttgatcatatactctccaaattcgaccctaatc 32948653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 239
Target Start/End: Complemental strand, 25581773 - 25581593
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||| ||       |||||  ||| ||    
T  25581773 taacatccatatatacaactttcatgatgacacttaaacccatttcggaacttaaacttgtcaaactgagacagtaagaa------atgcacggtgatag 25581680  T
Q  152 caaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatc 239  Q
    ||||||| |||||  |||||| ||||  ||| |||||  ||||||||||||||||| || |  |||||||||||| | ||||||||||    
T  25581679 caaaatcacagttatgctgcgttttc-acttcgggaacccttttcgactccgtttttgatcgtatactctccaaactcgaccctaatc 25581593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 207
Target Start/End: Original strand, 13938625 - 13938779
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacac 145  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||||  ||  |||||||||||| ||||  |||||| ||| || |||     ||||     
T  13938625 gaaatctaacattcatatctacaactttcatgaagacacataaaccca-atcataacttaaacttgccaaatcgagacagtaagaa-aca-----cacag 13938717  T
Q  146 tgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgtttt 207  Q
     |||| |||||||| ||||| ||||||||||||| ||||||||  ||||| |||||| ||||    
T  13938718 cgacaacaaaatcgtagttctgctgcgatttcgctttggggaacccttttagactccatttt 13938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 20901729 - 20901680
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  20901729 gtcaaaccaacggcattagaaatctaacatccatacctacaactttcatg 20901680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 24144420 - 24144373
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcgg 99  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  24144420 taacattcatacctacagctttcatgaagacacctaaacccagttcgg 24144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 24564665 - 24564758
Alignment:
Q  146 tgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatc 239  Q
    ||||||||||||||||||||  |||||||||  | ||||||||  ||||| |||||||||||||| |  |||||||| ||||| | ||||||||    
T  24564665 tgacagcaaaatcgcagttcttctgcgatttaactttggggaaccctttttgactccgttttcgatcatatactctctaaaatcggccctaatc 24564758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 24605700 - 24605793
Alignment:
Q  146 tgacagcaaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatc 239  Q
    ||||||||||||||||||||  |||||||||  | ||||||||  ||||| |||||||||||||| |  |||||||| ||||| | ||||||||    
T  24605700 tgacagcaaaatcgcagttcttctgcgatttaactttggggaaccctttttgactccgttttcgatcatatactctctaaaatcggccctaatc 24605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 29330526 - 29330574
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  29330526 gacgtcagaccaacggccttagaaagctaacatccatacctacaacttt 29330574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 17516972 - 17516926
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  17516972 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 17516926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 32027799 - 32027845
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  32027799 gtcaaaccaacggcattagaaatctaacattcatacctacaactttc 32027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 38619790 - 38619836
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||||||||||||||||||||||||||||    
T  38619790 gtcaaaccaacggcactagaaatctaacatccatacctacaactttc 38619836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 39363738 - 39363784
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||    
T  39363738 gtcaaatcaacggcactagaaagctaacatccatacctacaactttc 39363784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 17516579 - 17516540
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  17516579 caacggcattagaaagctaacatccatacctacaactttc 17516540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 32028193 - 32028232
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  32028193 caacggcattagaaagctaacatccatacctacaactttc 32028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 20917655 - 20917609
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  20917655 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 20917609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 24144242 - 24144200
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    |||||| ||||| |||| |||||||||||||||||||||||||    
T  24144242 gaaatcaaacattcatatctacaactttcatgaagacacctaa 24144200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 37804711 - 37804665
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  37804711 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 37804665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 42245174 - 42245128
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| |||||||||||||||  |||||||||||||||    
T  42245174 gtcaaaccaacggcattagaaatctaacatttatacctacaactttc 42245128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 264577 - 264532
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| |||||||||||||||  ||||||||||||||    
T  264577 gtcaaaccaacggcattagaaatctaacatttatacctacaacttt 264532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 295890 - 295841
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||| ||||||| | ||||||| ||||||| |||||||||||||||||||    
T  295890 gtcagatcaacgacattagaaagctaacattcatacctacaactttcatg 295841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 17516782 - 17516733
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||| | ||||||| ||||||||||||||||||||||||    
T  17516782 gacgtcagaccaacgacattagaaagctaacatccatacctacaactttc 17516733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 24564581 - 24564646
Alignment:
Q  51 ctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaa 116  Q
    |||||||||||| ||||||||||  |||| ||||||||| ||| ||| ||||||||| ||| ||||    
T  24564581 ctaacatccatatctacaacttttgtgaatacacctaaatccatttcagaacttaaagttgccaaa 24564646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 24605616 - 24605681
Alignment:
Q  51 ctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaa 116  Q
    |||||||||||| ||||||||||  |||| ||||||||| ||| ||| ||||||||| ||| ||||    
T  24605616 ctaacatccatatctacaacttttgtgaatacacctaaatccatttcagaacttaaagttgccaaa 24605681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 25581970 - 25581933
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagaca 83  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  25581970 gaaatgtaacatccatatctacaactttcatgaagaca 25581933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 296086 - 296038
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||| | ||||||| |||||||||||||||||||||||    
T  296086 gacgtcagaccaacgtcattagaaagctaacatccatacctacaacttt 296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 23908673 - 23908717
Alignment:
Q  47 aaatctaacatccatacctacaactttcatgaagacacctaaacc 91  Q
    |||| |||||| |||| |||||||||||||||||||||| |||||    
T  23908673 aaatttaacattcatatctacaactttcatgaagacaccaaaacc 23908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 21995975 - 21995896
Alignment:
Q  172 gatttcgcctt-ggggaaatcttttcgactccgttttcgacccaatactctccaaaattgaccctaatcattaccctatg 250  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||||||    
T  21995975 gatttcgcctttggggaaatcttttcgactccgtttttgatccaatactctccaaacatgaccctaatcattaccctatg 21995896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 17451124 - 17451202
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagaca 124  Q
    ||||||||||||||||  ||| || |||||||||||| || ||||| | ||||||||||||||||| ||||| ||||||    
T  17451124 gaaatctaacatccatgtctataattttcatgaagacgcccaaacctaattcggaacttaaacttgccaaacagagaca 17451202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 15859817 - 15859771
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  15859817 gtcaaaccaacggcattagaaaactaacatccatacctacaactttc 15859771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 22122823 - 22122774
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||||| ||||||| ||| |||||||||||||||||||||||    
T  22122823 gtcaaaccaacggcattagaaagctagcatccatacctacaactttcatg 22122774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 29298785 - 29298834
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  29298785 gacgtcagaacaacggcattagaaagctaacatccatacctacaactttc 29298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 23034857 - 23034901
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaac 90  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||    
T  23034857 gaaagctaacatccatatctacaaatttcatgaagacacctaaac 23034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 21841120 - 21841166
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  21841120 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 21841166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 22122623 - 22122585
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  22122623 caacggcattagaaagctaacatccatacctacaacttt 22122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 23593550 - 23593496
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||| ||||||| | ||||||| ||||||| ||||||| ||||||||||||||||    
T  23593550 attttgacgtcagaccaacggcattagaaagctaacatacatacctacaactttc 23593496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 27161395 - 27161349
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  27161395 gtcaaaccaacgacattagaaagctaacatccatacctacaactttc 27161349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 35764355 - 35764317
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaac 90  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  35764355 taacattcatacctacaattttcatgaagacacctaaac 35764317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 29777109 - 29777154
Alignment:
Q  43 ttagaaatctaacatccatacctacaactttcatgaagacacctaa 88  Q
    ||||||| |||||||||||||||||||||||| |||  ||||||||    
T  29777109 ttagaaagctaacatccatacctacaactttcgtgattacacctaa 29777154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 31613102 - 31613151
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||  ||||||| ||||||||||||||||||||||||    
T  31613102 gacgtcagaccaacggtattagaaacctaacatccatacctacaactttc 31613151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 31343559 - 31343607
Alignment:
Q  54 acatccatacctacaactttcatgaagacacctaaacccagttcggaac 102  Q
    ||||| ||| ||||||||||||||||||||||||||  || ||||||||    
T  31343559 acatcaatatctacaactttcatgaagacacctaaattcaattcggaac 31343607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 31343715 - 31343751
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaa 88  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  31343715 taacatccatatctataactttcatgaagacacctaa 31343751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 1179 - 1063
Alignment:
Q  55 catccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacagcaa 154  Q
    |||||||| || |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||| || ||     ||||  |||||||||    
T  1179 catccatatctgcaactttcatgaagacacttaaacccagttcagaacttaaacttgtcaaactgagacagtaagaa-ac-----gcacggtgacagcaa 1086  T
Q  155 aatcgcagttcagctgcgatttc 177  Q
    |||| |||||| |||||||||||    
T  1085 aatcacagttctgctgcgatttc 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 1379 - 1342
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagaca 83  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  1379 gaaatttaacatccatatctacaactttcatgaagaca 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 14241 - 14409
Alignment:
Q  52 taacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagacaataaaaacacattttgcacactgacag 151  Q
    |||||||||||  |||||||||||   ||||| |||||||||||| ||||||||||||||  ||||||||||| ||| || ||     ||||  ||||||    
T  14241 taacatccatatatacaactttcacacagacaactaaacccagtttggaacttaaacttgcaaaactgagacagtaagaa-ac-----gcacggtgacag 14334  T
Q  152 caaaatcgcagttcagctgcgatttcgccttggggaaatcttttcgactccgttttcgacccaatactctccaaa 226  Q
    |||||||||||||| ||||||||||| | ||  ||||  |||||||||| |||||| || |  ||||||||||||    
T  14335 caaaatcgcagttctgctgcgatttcactttaaggaacccttttcgacttcgtttttgatcatatactctccaaa 14409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 11991 - 11914
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacacctaaacccagttcggaacttaaacttgtcaaactgagac 123  Q
    |||| |||||||||||| |||||| ||| || |||||||||||||||| |||  |||||||||||| |||||||||||    
T  11991 gaaaactaacatccatatctacaaattttataaagacacctaaacccaattcataacttaaacttgccaaactgagac 11914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 934 - 989
Alignment:
Q  19 aatttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||| || |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  934 aattttgaagtcaaaccaacggcattagaaagctaacatccatacctacaactttc 989  T

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Target: scaffold0747; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 1249 - 1301
Alignment:
Q  21 tttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||||||| | ||||||| | ||||| ||||||||||||||||||||||||    
T  1249 tttagacgtcagaccaacggcat-agaaagctaacatccatacctacaactttc 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 10345 - 10384
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  10345 caacggcattagaaatctaacatccatacctacaactttc 10384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 10145 - 10191
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| |||||||  |||||| ||||||||||||||||||||||||    
T  10145 gtcaaaccaacggcaatagaaagctaacatccatacctacaactttc 10191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 10528 - 10577
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||  ||||||| ||||||||||||||||||||||||    
T  10528 gacgtcagaccaacggtattagaaagctaacatccatacctacaactttc 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 1782 - 1828
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  1782 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 1828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 3718 - 3676
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  3718 caacggcattagaaagctaacatccatacctacaactttcatg 3676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 4111 - 4062
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||| | ||||||| |||||||||||||||||| ||||||||    
T  4111 gtcaaaccaacgacattagaaagctaacatccatacctacacctttcatg 4062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 6805 - 6851
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  6805 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 6990 - 7044
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||| ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  6990 attttgacgtcataccaacggcattagaaagctaacatccatacctacaactttc 7044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 3377 - 3423
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  3377 gtcaaaccaacggcattagaaagctaacatccatacctacaactttc 3423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 6559 - 6505
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||| ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  6559 attttgacgtcagaccaacggcattagaaaactaacatccatacctacaactttc 6505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 6737 - 6698
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  6737 caacggcattggaaatctaacatccatacctacaactttc 6698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10963 - 10909
Alignment:
Q  20 atttagacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||| ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  10963 attttgacgtcagaccaacggcattagaaaactaacatccatacctacaactttc 10909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Complemental strand, 11141 - 11102
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  11141 caacggcattggaaatctaacatccatacctacaactttc 11102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 15273 - 15322
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | || |||| ||||||| ||||||||||||||||||||||||    
T  15273 gacgtcagaccagcggcattagaaagctaacatccatacctacaactttc 15322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 37010 - 36961
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  37010 gacgtcagaccaacggcattagaaagctaacatccatacctacaactttc 36961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 53683 - 53634
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  53683 gacgtcaaaccaatggcattagaaagctaacatccatacctacaactttc 53634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 5238 - 5290
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    ||||||| | ||||||| | ||||| |||||||||||||||||||||||||||    
T  5238 gacgtcagaccaacggcataagaaaactaacatccatacctacaactttcatg 5290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 33523 - 33570
Alignment:
Q  26 acgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| | ||||| | |||||||||||||||||||||||||||||||    
T  33523 acgtcagaccaacgacattagaaatctaacatccatacctacaacttt 33570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 501618 - 501657
Alignment:
Q  35 caacggccttagaaatctaacatccatacctacaactttc 74  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  501618 caacggcattagaaagctaacatccatacctacaactttc 501657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 1801 - 1847
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||| | ||||||| ||||||||||||||||||||||||    
T  1801 gtcaaaccaacgacattagaaagctaacatccatacctacaactttc 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 6300 - 6346
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  6300 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 6346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 332 - 286
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  332 gtcaaaccaacggcattagaaagctaacatccatacctataactttc 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 8387 - 8421
Alignment:
Q  43 ttagaaatctaacatccatacctacaactttcatg 77  Q
    ||||||| |||||||||||||||||||||||||||    
T  8387 ttagaaagctaacatccatacctacaactttcatg 8421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 12284 - 12238
Alignment:
Q  51 ctaacatccatacctacaactttcatgaagacacctaaacccagttc 97  Q
    ||||||| |||| |||||||||||||||||||||| ||||| |||||    
T  12284 ctaacattcatatctacaactttcatgaagacaccgaaacctagttc 12238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 12654 - 12613
Alignment:
Q  46 gaaatctaacatccatacctacaactttcatgaagacaccta 87  Q
    ||||||||||| | |||||||||| |||||||||||||||||    
T  12654 gaaatctaacaccaatacctacaattttcatgaagacaccta 12613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 8093 - 8139
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||  ||||||| ||||||||||||||||||||||||    
T  8093 gtcaaaccaacggaattagaaagctaacatccatacctacaactttc 8139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 43093 - 43139
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  43093 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 43139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 94764 - 94810
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttc 74  Q
    |||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  94764 gtcaaaccaacggcattagaaagctaacattcatacctacaactttc 94810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 561 - 606
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  561 gtcaaaccaacggcattagaaagctaacatctatacctacaacttt 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 911 - 959
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| |||||||||||| ||||||||||    
T  911 gacgtcagaccaacggcattagaaagctaacatccatatctacaacttt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 23339 - 23294
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    |||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  23339 gtcaaaccaacggcattagaaagctaacatctatacctacaacttt 23294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 22989 - 22941
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||||||| ||||||| |||||||||||| ||||||||||    
T  22989 gacgtcagaccaacggcattagaaagctaacatccatatctacaacttt 22941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 113370 - 113419
Alignment:
Q  28 gtcaaatcaacggccttagaaatctaacatccatacctacaactttcatg 77  Q
    |||||| ||||| | |||||||| ||||||||||||||||||||| ||||    
T  113370 gtcaaaccaacgtcattagaaatgtaacatccatacctacaacttccatg 113419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 19900 - 19852
Alignment:
Q  25 gacgtcaaatcaacggccttagaaatctaacatccatacctacaacttt 73  Q
    ||||||| | ||| ||| ||||||| |||||||||||||||||||||||    
T  19900 gacgtcagaccaatggcattagaaagctaacatccatacctacaacttt 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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