View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10325_high_14 (Length: 274)
Name: NF10325_high_14
Description: NF10325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10325_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 43287282 - 43287032
Alignment:
| Q |
1 |
agcaggctaaatatgtcagattaagttagtatcggtctcagcatttcagacttaaaaaaccctccaattactatacactctaaaatgacactaaatcatg |
100 |
Q |
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| T |
43287282 |
agcaggctaaatatgtcagattaagttagtatcggtctcagcatttcagacttaaaaaaccctccaattactatacactctaaaatgacactaaatcatg |
43287183 |
T |
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| Q |
101 |
catataacagtaacattgaaaaatagttgaaacaccaaactacaatgattaaattaaatggacaaacaagaccataaagttttgattgcattgatagtgt |
200 |
Q |
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| T |
43287182 |
catataacagtaacattgaaaaatagttgaaacacc-aactagaatgattaaattaaatggacaaataagaccataaagttttgattgcattgatagtgt |
43287084 |
T |
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| Q |
201 |
gggtaggggactagtttggccaatgccttataggttcatgatctgtgtcctt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43287083 |
gggtaggggactagtttggccaatgccttataggttcatgatctgtgtcctt |
43287032 |
T |
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