View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10325_high_21 (Length: 241)

Name: NF10325_high_21
Description: NF10325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10325_high_21
NF10325_high_21
[»] chr3 (23 HSPs)
chr3 (1-228)||(3263924-3264151)
chr3 (1-228)||(36528731-36528958)
chr3 (151-226)||(16979926-16980001)
chr3 (152-226)||(15446831-15446905)
chr3 (143-226)||(24177699-24177782)
chr3 (169-226)||(37641467-37641524)
chr3 (151-226)||(52988821-52988896)
chr3 (156-221)||(14967203-14967268)
chr3 (125-190)||(16050915-16050980)
chr3 (181-226)||(31223815-31223860)
chr3 (121-190)||(40807980-40808049)
chr3 (121-190)||(44274402-44274471)
chr3 (122-190)||(12509349-12509417)
chr3 (121-189)||(17044950-17045018)
chr3 (121-189)||(17047110-17047178)
chr3 (121-189)||(22306583-22306651)
chr3 (143-190)||(11563731-11563778)
chr3 (143-189)||(22652779-22652825)
chr3 (121-190)||(10563692-10563761)
chr3 (128-189)||(17541425-17541486)
chr3 (121-190)||(40812817-40812886)
chr3 (121-190)||(49900714-49900783)
chr3 (121-189)||(35354586-35354654)
[»] chr4 (14 HSPs)
chr4 (1-113)||(14185905-14186017)
chr4 (151-226)||(15008977-15009052)
chr4 (152-228)||(14186973-14187049)
chr4 (123-226)||(40620517-40620621)
chr4 (151-218)||(10057675-10057742)
chr4 (121-190)||(15613074-15613143)
chr4 (121-190)||(15115206-15115275)
chr4 (121-190)||(51993545-51993614)
chr4 (121-189)||(11425927-11425995)
chr4 (121-189)||(16998509-16998577)
chr4 (121-189)||(25091637-25091705)
chr4 (121-189)||(53630474-53630542)
chr4 (121-190)||(37019654-37019723)
chr4 (121-189)||(10356436-10356504)
[»] scaffold0034 (1 HSPs)
scaffold0034 (151-226)||(29179-29254)
[»] chr1 (12 HSPs)
chr1 (143-226)||(46197708-46197791)
chr1 (151-226)||(29763595-29763670)
chr1 (152-226)||(12327706-12327780)
chr1 (152-226)||(51336494-51336568)
chr1 (151-226)||(50001490-50001565)
chr1 (165-226)||(21995627-21995688)
chr1 (174-226)||(24007188-24007240)
chr1 (121-189)||(19676695-19676763)
chr1 (121-189)||(21046049-21046117)
chr1 (121-190)||(42697767-42697837)
chr1 (121-190)||(16058313-16058382)
chr1 (121-190)||(42913033-42913102)
[»] chr2 (19 HSPs)
chr2 (143-224)||(21080934-21081015)
chr2 (152-226)||(357896-357970)
chr2 (121-226)||(40912304-40912409)
chr2 (151-226)||(21915638-21915713)
chr2 (151-226)||(25184203-25184278)
chr2 (165-224)||(34858157-34858216)
chr2 (165-224)||(34873219-34873278)
chr2 (174-226)||(34491203-34491255)
chr2 (184-226)||(18240824-18240866)
chr2 (121-190)||(22501954-22502024)
chr2 (121-190)||(22509888-22509958)
chr2 (121-190)||(24516170-24516239)
chr2 (121-190)||(25046101-25046171)
chr2 (121-190)||(17307470-17307539)
chr2 (121-189)||(2523747-2523815)
chr2 (121-189)||(5031129-5031197)
chr2 (123-189)||(24780840-24780906)
chr2 (164-226)||(27484452-27484514)
chr2 (121-189)||(9975913-9975981)
[»] scaffold0515 (1 HSPs)
scaffold0515 (143-226)||(5035-5118)
[»] scaffold0306 (1 HSPs)
scaffold0306 (143-226)||(5035-5118)
[»] scaffold0138 (2 HSPs)
scaffold0138 (151-226)||(21111-21186)
scaffold0138 (151-226)||(34126-34201)
[»] scaffold0057 (1 HSPs)
scaffold0057 (143-226)||(69816-69899)
[»] chr8 (18 HSPs)
chr8 (151-226)||(23479096-23479171)
chr8 (153-226)||(19880838-19880911)
chr8 (69-190)||(20397509-20397632)
chr8 (151-226)||(16198850-16198925)
chr8 (151-226)||(17158926-17159001)
chr8 (151-226)||(26454722-26454797)
chr8 (159-226)||(41680096-41680163)
chr8 (121-189)||(39936007-39936075)
chr8 (151-226)||(22237013-22237088)
chr8 (159-226)||(12577901-12577968)
chr8 (124-190)||(23419427-23419494)
chr8 (121-179)||(5082222-5082280)
chr8 (95-190)||(22583659-22583756)
chr8 (121-190)||(5761518-5761586)
chr8 (121-190)||(6101752-6101821)
chr8 (126-190)||(4380616-4380680)
chr8 (121-189)||(20083638-20083706)
chr8 (121-189)||(42817907-42817975)
[»] chr5 (17 HSPs)
chr5 (152-226)||(10774627-10774701)
chr5 (151-226)||(17011742-17011817)
chr5 (152-226)||(31456975-31457049)
chr5 (151-226)||(21554266-21554341)
chr5 (143-226)||(29448846-29448929)
chr5 (156-226)||(21556912-21556982)
chr5 (152-226)||(30616629-30616703)
chr5 (151-226)||(26832635-26832710)
chr5 (184-226)||(22240882-22240924)
chr5 (184-226)||(22241878-22241920)
chr5 (184-226)||(22242874-22242916)
chr5 (184-226)||(22243870-22243912)
chr5 (121-190)||(10954073-10954142)
chr5 (69-190)||(31622047-31622170)
chr5 (143-189)||(266044-266090)
chr5 (145-190)||(20469175-20469220)
chr5 (145-190)||(21617927-21617972)
[»] chr6 (15 HSPs)
chr6 (121-226)||(27329944-27330049)
chr6 (121-226)||(27390684-27390789)
chr6 (151-226)||(15173416-15173491)
chr6 (151-227)||(28103410-28103486)
chr6 (151-226)||(15900617-15900692)
chr6 (151-226)||(27852220-27852295)
chr6 (121-190)||(15890711-15890780)
chr6 (165-226)||(20733207-20733268)
chr6 (128-189)||(18703559-18703620)
chr6 (128-189)||(18709494-18709555)
chr6 (121-189)||(7827956-7828024)
chr6 (121-189)||(19655231-19655299)
chr6 (121-189)||(23150287-23150355)
chr6 (121-188)||(24267833-24267900)
chr6 (122-190)||(12041619-12041688)
[»] scaffold0058 (1 HSPs)
scaffold0058 (151-226)||(6382-6457)
[»] chr7 (24 HSPs)
chr7 (151-226)||(29052145-29052220)
chr7 (151-226)||(16549968-16550043)
chr7 (151-226)||(16615619-16615694)
chr7 (151-226)||(30820114-30820189)
chr7 (169-226)||(19485936-19485993)
chr7 (151-226)||(36685109-36685184)
chr7 (121-190)||(12127162-12127231)
chr7 (121-202)||(13147459-13147540)
chr7 (165-226)||(46579722-46579783)
chr7 (121-189)||(20620270-20620338)
chr7 (121-190)||(20586336-20586405)
chr7 (121-190)||(24269946-24270015)
chr7 (121-189)||(8851159-8851227)
chr7 (121-189)||(12372258-12372326)
chr7 (121-189)||(12465260-12465328)
chr7 (143-190)||(35771440-35771487)
chr7 (124-190)||(10658850-10658916)
chr7 (139-189)||(16078332-16078382)
chr7 (143-189)||(18074647-18074693)
chr7 (145-190)||(4071828-4071873)
chr7 (125-190)||(12754611-12754676)
chr7 (121-189)||(11067452-11067520)
chr7 (121-189)||(12322930-12322998)
chr7 (121-189)||(32433589-32433657)
[»] scaffold0436 (1 HSPs)
scaffold0436 (151-224)||(8974-9047)
[»] scaffold0046 (1 HSPs)
scaffold0046 (151-226)||(21740-21815)
[»] scaffold0819 (1 HSPs)
scaffold0819 (152-226)||(5381-5455)
[»] scaffold0104 (2 HSPs)
scaffold0104 (152-226)||(14972-15046)
scaffold0104 (152-226)||(16992-17066)
[»] scaffold0071 (1 HSPs)
scaffold0071 (152-226)||(15287-15361)
[»] scaffold0632 (1 HSPs)
scaffold0632 (119-226)||(1147-1254)
[»] scaffold0577 (1 HSPs)
scaffold0577 (151-226)||(9073-9148)
[»] scaffold0462 (1 HSPs)
scaffold0462 (151-226)||(11237-11312)
[»] scaffold0083 (1 HSPs)
scaffold0083 (151-226)||(1951-2026)
[»] scaffold0156 (1 HSPs)
scaffold0156 (122-226)||(16589-16693)
[»] scaffold1941 (1 HSPs)
scaffold1941 (121-190)||(122-191)
[»] scaffold0174 (1 HSPs)
scaffold0174 (151-226)||(13651-13726)
[»] scaffold0671 (1 HSPs)
scaffold0671 (121-190)||(4923-4993)
[»] scaffold0112 (1 HSPs)
scaffold0112 (98-190)||(2848-2942)
[»] scaffold1766 (1 HSPs)
scaffold1766 (121-190)||(695-764)
[»] scaffold0153 (2 HSPs)
scaffold0153 (165-214)||(5325-5374)
scaffold0153 (165-214)||(12345-12394)
[»] scaffold0077 (1 HSPs)
scaffold0077 (121-190)||(5934-6003)
[»] scaffold1633 (1 HSPs)
scaffold1633 (121-189)||(1189-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (121-189)||(468-536)
[»] scaffold0686 (1 HSPs)
scaffold0686 (170-226)||(1471-1527)
[»] scaffold0036 (1 HSPs)
scaffold0036 (121-189)||(78185-78253)
[»] scaffold0019 (1 HSPs)
scaffold0019 (121-189)||(24131-24199)
[»] scaffold0802 (1 HSPs)
scaffold0802 (143-190)||(4708-4755)
[»] scaffold0139 (1 HSPs)
scaffold0139 (159-226)||(23556-23623)
[»] scaffold0111 (1 HSPs)
scaffold0111 (121-188)||(12534-12601)
[»] scaffold0113 (1 HSPs)
scaffold0113 (121-203)||(35474-35555)
[»] scaffold0037 (1 HSPs)
scaffold0037 (145-191)||(117805-117851)
[»] scaffold0956 (1 HSPs)
scaffold0956 (121-186)||(2539-2604)
[»] scaffold0379 (1 HSPs)
scaffold0379 (98-185)||(10757-10846)
[»] scaffold0207 (1 HSPs)
scaffold0207 (121-190)||(13391-13460)
[»] scaffold0064 (1 HSPs)
scaffold0064 (121-202)||(58730-58811)
[»] scaffold0020 (2 HSPs)
scaffold0020 (121-190)||(168998-169067)
scaffold0020 (121-189)||(143595-143663)
[»] scaffold0001 (3 HSPs)
scaffold0001 (121-190)||(77671-77740)
scaffold0001 (121-189)||(31978-32046)
scaffold0001 (121-189)||(37285-37353)
[»] scaffold0737 (1 HSPs)
scaffold0737 (121-189)||(4714-4782)
[»] scaffold0149 (1 HSPs)
scaffold0149 (122-190)||(29572-29640)
[»] scaffold0047 (1 HSPs)
scaffold0047 (121-189)||(79033-79101)


Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 3264151 - 3263924
Alignment:
Q  1 attaacttatcattagaacaccaattattgatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaaccct 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3264151 attaacttatcattagaacaccaattattcatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaaccct 3264052  T
Q  101 aattctcaaattcacaacaaaacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3264051 aattctcaaattcacaacaaaacatgttaaacccaatctcataattatattacttagaattagagaaggttaatccgacccttaccttagtattgatgat 3263952  T
Q  201 cgacggtccctctccctcttggttcttc 228  Q
    || ||||| |||||||||||||||||||    
T  3263951 cggcggtctctctccctcttggttcttc 3263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 36528731 - 36528958
Alignment:
Q  1 attaacttatcattagaacaccaattattgatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattctcaaccct 100  Q
    |||||| |||| ||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  36528731 attaacctatcgttataacaccaattattcatcaacctactgtatgcaaattcaaaggggttcttaaatctattaacaacctgttacaattctcaaccct 36528830  T
Q  101 aattctcaaattcacaacaaaacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgat 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  36528831 aattctcaaattcacaacaaaacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttaccttagtattgatgat 36528930  T
Q  201 cgacggtccctctccctcttggttcttc 228  Q
    || ||||| |||||||||||||||||||    
T  36528931 cggcggtctctctccctcttggttcttc 36528958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16979926 - 16980001
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  16979926 tacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcgacggtctctctctctcttggttct 16980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 15446905 - 15446831
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| |||| |||||| |||||||||||| ||||||||| || || |||||||||||||||||    
T  15446905 acttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttct 15446831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 24177782 - 24177699
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||  ||||| |||||||||| |||  |||||| ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  24177782 aattatacaacttataattagagaaagtttgtcccacccttaccttagtattgataatcggcggtctctctccctcttggttct 24177699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 37641524 - 37641467
Alignment:
Q  169 gttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  37641524 gttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 37641467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 52988896 - 52988821
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||||||| || ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  52988896 tactcagaattattgaaggttagtctcacccttaccttagtattgatgatctgcggtctctctccctcttggttct 52988821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 14967203 - 14967268
Alignment:
Q  156 agaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttg 221  Q
    |||||||  |||||||| |||| | |||||||||||||||||||||| ||||| ||||||||||||    
T  14967203 agaattattgaaggttagtcccccccttaccttagtattgatgatcggcggtctctctccctcttg 14967268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 16050915 - 16050980
Alignment:
Q  125 tgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||||| ||| ||| |||  |||||||||||||||| |||| |||||| ||||||||||    
T  16050915 tgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 31223860 - 31223815
Alignment:
Q  181 cttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||    
T  31223860 cttaccttagtattgatgatcggtggtctctctccctcttggttct 31223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 40807980 - 40808049
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  40807980 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 44274402 - 44274471
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  44274402 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 12509417 - 12509349
Alignment:
Q  122 acatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||||| ||||||||||    
T  12509417 acatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttaccttag 12509349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 17044950 - 17045018
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  17044950 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 17047110 - 17047178
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  17047110 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 22306651 - 22306583
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  22306651 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 11563731 - 11563778
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||  ||||||||||||||||||||| |||||| ||||||||||    
T  11563731 aattataccacttagaattagagaaggttagtcccacccttaccttag 11563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 22652779 - 22652825
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||    
T  22652779 aattaaattacttagaattagagaaagttagtcccactcttacctta 22652825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 10563692 - 10563761
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| |||||||||||  ||||| |||||||||| |||| ||||||  |||||||||    
T  10563692 aacatgctaaactcaatttcataattatacaacttaaaattagagaaagttagtcccaccattaccttag 10563761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 17541425 - 17541486
Alignment:
Q  128 taaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  17541425 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 40812817 - 40812886
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| ||||||   |||||||||||||||| |||| |||||| ||||||||||    
T  40812817 aacatgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttaccttag 40812886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 49900714 - 49900783
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  ||||||||||||||||  ||| |||||| ||||||||||    
T  49900714 aacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 49900783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 35354586 - 35354654
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  ||||| |||||||||| |||| ||||||||||| ||||    
T  35354586 aacatgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccacacttagctta 35354654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 14185905 - 14186017
Alignment:
Q  1 attaacttatcattagaacaccaattattgatcaatctactgtatgcaaattcaaaggggttctcaaatctattaacaacctattacaattc-tcaaccc 99  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| | ||||     
T  14185905 attaacctatcattagaacaccaattattcatcaacctactgtatgcaaattcaaa-aggttctcaaatctattaacaacctattacaattcttaaacct 14186003  T
Q  100 taattctcaaattc 113  Q
    ||||||||||||||    
T  14186004 taattctcaaattc 14186017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 15008977 - 15009052
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  15008977 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 15009052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 14186973 - 14187049
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttcttc 228  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  14186973 acttagaattagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctccctcgtggttcttc 14187049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 40620517 - 40620621
Alignment:
Q  123 catgttaaacccaatct-cataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttg 221  Q
    ||||||||| ||||| | || ||||| | ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||     
T  40620517 catgttaaatccaattttcagaattaaaatacttagaattagagaaagttattcccacccttaccttagtattgatgatcggcggtctctctccctctta 40620616  T
Q  222 gttct 226  Q
    |||||    
T  40620617 gttct 40620621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 10057675 - 10057742
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctc 218  Q
    |||| |||||||  |||||||| |||||| |||||||||||||||||||||| ||||| |||||||||    
T  10057675 tactcagaattattgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctc 10057742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 15613074 - 15613143
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| ||| |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  15613074 aacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 15613143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 15115206 - 15115275
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  15115206 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 51993545 - 51993614
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| ||| ||||| |  ||||||||||| ||||||||| |||||| ||||||||||    
T  51993545 aacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttaccttag 51993614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 11425927 - 11425995
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  11425927 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 16998509 - 16998577
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| |||| || ||| |||||||||    
T  16998509 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttagtctcactcttacctta 16998577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 25091637 - 25091705
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  25091637 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 53630542 - 53630474
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  53630542 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 37019654 - 37019723
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  ||||| |||||||||| |||| || ||| ||||||||||    
T  37019654 aacatgttaaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 10356504 - 10356436
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||  |||||||||    
T  10356504 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttacctta 10356436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 29254 - 29179
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29254 tacttagaattagagaaagttagtcccactcttaccttagtattgatgatcgacggtctctctccctcttggttct 29179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 46197791 - 46197708
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  46197791 aattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacagtctctctccctcttggttct 46197708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 29763670 - 29763595
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  29763670 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgtcggtctctctccctcttggttct 29763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 12327780 - 12327706
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| |||| || ||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  12327780 acttagaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttct 12327706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 51336494 - 51336568
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| | |||||||||||||||    
T  51336494 acttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctccctcttggttct 51336568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 50001490 - 50001565
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||| |||| |||| |||||| |||||||||||||||||||||| ||||| |||||||| ||| ||||    
T  50001490 tacttagaattaaagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcccttttgattct 50001565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 21995688 - 21995627
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||| |||||| |||| ||||||||||||||||| ||||| |||||||||||||||||    
T  21995688 gaaggttagtcccacccttatcttagtattgatgatcggcggtctctctccctcttggttct 21995627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 24007240 - 24007188
Alignment:
Q  174 tcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  24007240 tcccacccttaccttagtatagatgatcgacggtctctctccctcttggttct 24007188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 19676695 - 19676763
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  19676695 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 21046117 - 21046049
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  21046117 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 42697767 - 42697837
Alignment:
Q  121 aacatgttaaacccaat-ctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| |||| |||||||  ||||||||||| ||||||||| || ||| ||||||||||    
T  42697767 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcacccttaccttag 42697837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 16058382 - 16058313
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  ||||||||||||||||  ||| |||||| ||||||||||    
T  16058382 aacatgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttaccttag 16058313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 42913033 - 42913102
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| ||||||||||    
T  42913033 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 42913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 21081015 - 21080934
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggtt 224  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  21081015 aattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 21080934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 357896 - 357970
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  357896 acttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 357970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 40912304 - 40912409
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctctt 220  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||||||||||||||   ||| ||||| |||||    
T  40912304 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggttgtctctctctctctt 40912403  T
Q  221 ggttct 226  Q
    ||||||    
T  40912404 ggttct 40912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 21915638 - 21915713
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| || ||| ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  21915638 tacttagaattagagaaagttagtcacacccttactttagtattgatgatcggcggtctctctccctcttggttct 21915713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 25184203 - 25184278
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| || ||| |||||||||||||||||||| | ||||| ||||||||||| |||||    
T  25184203 tacttagaattagagaaagttagtctcacccttaccttagtattgatgattggcggtctctctccctcttcgttct 25184278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 34858216 - 34858157
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggtt 224  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  34858216 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 34858157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 34873278 - 34873219
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggtt 224  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||    
T  34873278 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggtt 34873219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 34491255 - 34491203
Alignment:
Q  174 tcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  34491255 tcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 34491203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 18240824 - 18240866
Alignment:
Q  184 accttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  18240824 accttagtattgatgatcgacggtctctctccctcttggttct 18240866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 22501954 - 22502024
Alignment:
Q  121 aacatgttaaacccaat-ctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  22501954 aacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttaccttag 22502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 22509888 - 22509958
Alignment:
Q  121 aacatgttaaacccaat-ctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  22509888 aacatgttaaatccaattctcagaattaaattacttagaattagagaaagttagtcccacccttaccttag 22509958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 24516170 - 24516239
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  24516170 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 25046101 - 25046171
Alignment:
Q  121 aacatgttaaacccaat-ctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| |||| |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  25046101 aacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 25046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 17307470 - 17307539
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  17307470 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 17307539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 2523815 - 2523747
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||||||||| |||| | | |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  2523815 aacatgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 5031197 - 5031129
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 24780906 - 24780840
Alignment:
Q  123 catgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  24780906 catgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 27484514 - 27484452
Alignment:
Q  164 agaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||| || ||| ||||||||||||||||||||||  |||  |||||||||||||||||    
T  27484514 agaaagttagtctcacccttaccttagtattgatgatcggtggtatctctccctcttggttct 27484452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 9975913 - 9975981
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||| || |||||||||    
T  9975913 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttacctta 9975981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 5035 - 5118
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  5035 aattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttct 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 5035 - 5118
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  5035 aattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttct 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 21111 - 21186
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  21111 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 21186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 34126 - 34201
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  34126 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 34201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 69899 - 69816
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | ||| |||||||||||||||||    
T  69899 aattaaattacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctccctcttggttct 69816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 23479096 - 23479171
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  23479096 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 23479171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 19880838 - 19880911
Alignment:
Q  153 cttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  19880838 cttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 19880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 20397632 - 20397509
Alignment:
Q  69 tctattaacaaccta-ttacaattctcaaccctaattctcaaattcacaacaa-aacatgttaaacccaatctcataattatattacttagaattagaga 166  Q
    ||||||||||||||| |||||| | | || |||||||| |||| ||||||||| |||||| ||||| |||| ||| |||||||  |||||||||||||||    
T  20397632 tctattaacaacctaattacaactttaaaacctaattcccaaaatcacaacaacaacatgctaaactcaatttcagaattatacaacttagaattagaga 20397533  T
Q  167 aggttaatcccacacttaccttag 190  Q
    | ||||||||||| ||||||||||    
T  20397532 aagttaatcccacccttaccttag 20397509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16198850 - 16198925
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| ||||||  |||||||||||||||||||||  |||| |||||||||||||||||    
T  16198850 tacttagaattagagaaagttagtcccacttttaccttagtattgatgatcggtggtctctctccctcttggttct 16198925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 17159001 - 17158926
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||||  |||| ||||||| |||||||||    
T  17159001 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtggtctctctcccccttggttct 17158926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 26454722 - 26454797
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| || ||  ||||||||||||||||    
T  26454722 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcgatctttctccctcttggttct 26454797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 41680163 - 41680096
Alignment:
Q  159 attagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| ||||||||| ||||||  ||||||||||||||||||||| ||||| |||||||||||||||||    
T  41680163 attaaagaaggttagtcccacctttaccttagtattgatgatcggcggtctctctccctcttggttct 41680096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 39936075 - 39936007
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| ||||||||||| |||||||||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttacctta 39936007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 22237088 - 22237013
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||| ||| |||||| |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  22237088 tactcagaattattgaagattactcccacccttaccttagtattgatgatcggcggtctctctccttcttggttct 22237013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 12577901 - 12577968
Alignment:
Q  159 attagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||| |||| |||||| |||||||||||||||||||||  | ||| |||||||||||| ||||    
T  12577901 attagagaaagttagtcccacccttaccttagtattgatgatcagcagtctctctccctcttgattct 12577968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 23419427 - 23419494
Alignment:
Q  124 atgttaaacccaat-ctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||| ||||| |||| |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  23419427 atgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 23419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 5082280 - 5082222
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccac 179  Q
    |||||| ||||| |||| |||||||||||  |||||||||||||||| |||| ||||||    
T  5082280 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttagtcccac 5082222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 190
Target Start/End: Complemental strand, 22583756 - 22583659
Alignment:
Q  95 aaccctaattctcaaattcacaacaaa--acatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| |||||||| ||  ||  ||||||||||  |||| ||| |||||||  || |||||||| |||| ||||||||||| ||||||||||    
T  22583756 aaccctaattcccaaattcataaacaactacatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttaccttag 22583659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 5761518 - 5761586
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  5761518 aacatgctaaactcaatttcaaaattatac-acttagaattagagaaagttagtcccacccttaccttag 5761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 6101821 - 6101752
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||||||  |||||||||    
T  6101821 aacatgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttaccttag 6101752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 4380680 - 4380616
Alignment:
Q  126 gttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||  | ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  4380680 gttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 20083706 - 20083638
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  20083706 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 42817975 - 42817907
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| || | |||||| |||||||||    
T  42817975 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttacctta 42817907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 226
Target Start/End: Complemental strand, 10774701 - 10774627
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  10774701 acttagaattagtgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 10774627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 17011742 - 17011817
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||| ||||| |||||| ||||||||||    
T  17011742 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctccttcttggttct 17011817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 31456975 - 31457049
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| |||||||||| |||| || ||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  31456975 acttaaaattagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttct 31457049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 21554341 - 21554266
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||||||| |||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  21554341 tactcagaattactgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccctcttggttct 21554266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 29448846 - 29448929
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||||||||||| |||| || ||   |||||||||||||||||||||  |||| |||||||||||||||||    
T  29448846 aattaaattacttagaattagagaaagttagtctcatcattaccttagtattgatgatcggtggtctctctccctcttggttct 29448929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 21556982 - 21556912
Alignment:
Q  156 agaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||  |||||||| || ||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  21556982 agaattactgaaggttagtctcacccttaccttagtattgatgatcggcggtctctctccctcttggttct 21556912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 30616629 - 30616703
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| || | |||||| |||||| || |||||||||||| ||||| |||||||||||||||||    
T  30616629 acttagaattagagaaagtcagtcccacccttaccataatattgatgatcggcggtctctctccctcttggttct 30616703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 26832635 - 26832710
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||  |||||||| |||||| |||||| ||||||||||| ||  ||||| |||||||||||||||||    
T  26832635 tacttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctcttggttct 26832710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22240924 - 22240882
Alignment:
Q  184 accttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  22240924 accttagtattgatgatcgacggtctctctccctcttggttct 22240882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22241920 - 22241878
Alignment:
Q  184 accttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  22241920 accttagtattgatgatcgacggtctctctccctcttggttct 22241878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22242916 - 22242874
Alignment:
Q  184 accttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  22242916 accttagtattgatgatcgacggtctctctccctcttggttct 22242874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22243912 - 22243870
Alignment:
Q  184 accttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  22243912 accttagtattgatgatcgacggtctctctccctcttggttct 22243870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 10954073 - 10954142
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| ||||| ||||||||| |  |||||||||||  |||||||| |||||| ||||||||||    
T  10954073 aacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttaccttag 10954142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 31622047 - 31622170
Alignment:
Q  69 tctattaacaacctattacaattctcaaccctaattctcaaattcacaa-caa-aacatgttaaacccaatctcataattatattacttagaattagaga 166  Q
    ||||||||||||| ||||| | |   || |||||||| |||||| |||| ||| |||||| ||||| |||| ||| |||||||  || || |||||||||    
T  31622047 tctattaacaaccaattacgacttcaaaacctaattcccaaatttacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagaga 31622146  T
Q  167 aggttaatcccacacttaccttag 190  Q
    | ||||||||||| ||||||||||    
T  31622147 aagttaatcccacccttaccttag 31622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 266044 - 266090
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||||||    
T  266044 aattaaattacttagaattagagaaagttagtcccacccttacctta 266090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 20469220 - 20469175
Alignment:
Q  145 ttatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| |||||||||||||||| |||| |||||| ||||||||||    
T  20469220 ttatatcacttagaattagagaaagttagtcccacccttaccttag 20469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 21617972 - 21617927
Alignment:
Q  145 ttatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| |||||||||||||||| |||| |||||| ||||||||||    
T  21617972 ttatatcacttagaattagagaaagttagtcccacccttaccttag 21617927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 27330049 - 27329944
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctctt 220  Q
    |||||||||||| |||| ||| |||||||  || ||||||||||||| |||| || ||| |||||||||||||||||||||| ||||| ||||||||||     
T  27330049 aacatgttaaactcaatttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccctctg 27329950  T
Q  221 ggttct 226  Q
    ||||||    
T  27329949 ggttct 27329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 27390789 - 27390684
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctctt 220  Q
    |||||||||||| |||| ||| |||||||  || ||||||||||||| |||| || ||| |||||||||||||||||||||| ||||| ||||||||||     
T  27390789 aacatgttaaactcaatttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctccctctg 27390690  T
Q  221 ggttct 226  Q
    ||||||    
T  27390689 ggttct 27390684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 15173491 - 15173416
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| ||||||  ||||||||||||||||||||| ||||| |||||||||||||||||    
T  15173491 tacttagaattagagaaagttagtcccaccattaccttagtattgatgatcggcggtctctctccctcttggttct 15173416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 28103486 - 28103410
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttctt 227  Q
    |||| |||||||  |||| ||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28103486 tactcagaattattgaagattagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttctt 28103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 15900692 - 15900617
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||  || ||| |||||||||||||||| ||||| ||||| |||||||||||||||||    
T  15900692 tacttagaattagagaaagttggtctcacccttaccttagtattgaagatcggcggtctctctccctcttggttct 15900617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 27852220 - 27852295
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||| |  |||||||| |||||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  27852220 tacttagaatgattgaaggttagtcccacccttaccttagtattgatgatcagcggtctctctccctcttggttct 27852295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 15890780 - 15890711
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  15890780 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 20733268 - 20733207
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||| || ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  20733268 gaaggttagtctcacccttaccttagtattgatgatcagcggtctctctccctcttggttct 20733207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 18703559 - 18703620
Alignment:
Q  128 taaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    ||||| |||| ||| |||||||  |||||||||||||||| |||| ||||||||||||||||    
T  18703559 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 18703620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 18709494 - 18709555
Alignment:
Q  128 taaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    ||||| |||| ||| |||||||  |||||||||||||||| |||| ||||||||||||||||    
T  18709494 taaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 18709555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 7827956 - 7828024
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  7827956 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 19655299 - 19655231
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  19655299 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 23150355 - 23150287
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  23150355 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 24267833 - 24267900
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctt 188  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||    
T  24267833 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 12041688 - 12041619
Alignment:
Q  122 acatgttaaacccaatct-cataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||| ||||| | || |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  12041688 acatgttaaatccaattttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 12041619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 6382 - 6457
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  6382 tacttagaattagagaaagttagtcccacccttacattagtattgatgatcggcggtctctctccctcttggttct 6457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 29052220 - 29052145
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||  ||||||||||| |||||    
T  29052220 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcgacggtttctctccctcttagttct 29052145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 16550043 - 16549968
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||  |||||||||||||||||||||| | ||| |||||||||||||||||    
T  16550043 tacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttct 16549968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 16615619 - 16615694
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||  |||||||||||||||||||||| | ||| |||||||||||||||||    
T  16615619 tacttagaattagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctccctcttggttct 16615694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 30820189 - 30820114
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||||||| |||||| || ||||||||||||||||||| ||||| |||||||||||||||||    
T  30820189 tactcagaattactgaaggttagtcccaccctcaccttagtattgatgatcggcggtctctctccctcttggttct 30820114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 19485993 - 19485936
Alignment:
Q  169 gttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  19485993 gttagtcccacccttaccttagtattgatgatcggcggtctctctccctcttggttct 19485936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 36685184 - 36685109
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||||||  | |||| ||||||||||||||||||||| |||||| |||||||||||||||||    
T  36685184 tactcagaattattgaaggttggttccacccttaccttagtattgatgatcaacggtctctctccctcttggttct 36685109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 12127231 - 12127162
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  12127231 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 12127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 13147540 - 13147459
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcg 202  Q
    |||||| ||||| |||| ||| |||||||| |||||||||||||||| |||| |||||| ||||||||| | | ||||||||    
T  13147540 aacatgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaatttagatgatcg 13147459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Complemental strand, 46579783 - 46579722
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||  |||||| |||||||||||||||||||||| ||||| |||||||| ||||||||    
T  46579783 gaaggttgttcccacccttaccttagtattgatgatcggcggtctctctccctattggttct 46579722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 20620270 - 20620338
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||||||||||||||||    
T  20620270 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttacctta 20620338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 20586336 - 20586405
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  20586336 aacatggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 24270015 - 24269946
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  ||||| |||||||||| ||||||||||| ||||||||||    
T  24270015 aacatgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttag 24269946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 8851227 - 8851159
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  8851227 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 12372258 - 12372326
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  12372258 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 12465328 - 12465260
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  12465328 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 35771487 - 35771440
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||| |||||||||||||||| |||| |||||| ||||||||||    
T  35771487 aattatatcacttagaattagagaaagttagtcccacccttaccttag 35771440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 10658916 - 10658850
Alignment:
Q  124 atgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||| ||||| ||| ||| |||  ||||||||||| ||||||||| |||||| ||||||||||    
T  10658916 atgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttaccttag 10658850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 16078332 - 16078382
Alignment:
Q  139 tcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||||||||  |||||||||||||||| |||| |||||| |||||||||    
T  16078332 tcataattataccacttagaattagagaaagttagtcccacccttacctta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 18074693 - 18074647
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||||  |||||||||||||||| ||||||||||| |||||||||    
T  18074693 aattataccacttagaattagagaaagttaatcccactcttacctta 18074647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 4071828 - 4071873
Alignment:
Q  145 ttatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| |||||||||||||||| |||| |||||| ||||||||||    
T  4071828 ttatatcacttagaattagagaaagttagtcccacccttaccttag 4071873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 12754676 - 12754611
Alignment:
Q  125 tgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||| ||| | ||| ||| |||| |||||||||||||||| |||| |||||| ||||||||||    
T  12754676 tgttaaatccagtttcagaatcatataacttagaattagagaaagttagtcccacccttaccttag 12754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 11067452 - 11067520
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  11067452 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 12322998 - 12322930
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| | |||| |||||||||    
T  12322998 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttacctta 12322930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 32433657 - 32433589
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  32433657 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 8974 - 9047
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggtt 224  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||||  |||| |||||||||||||||    
T  8974 tacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggtggtcactctccctcttggtt 9047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 226
Target Start/End: Complemental strand, 21815 - 21740
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||||||| |||| |||||  ||||||||||||||||||||||  |||| |||||||||||||||||    
T  21815 tacttagaattagagaaagttagtcccatccttaccttagtattgatgatcggtggtctctctccctcttggttct 21740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 5381 - 5455
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||| |||||||| |||||| |||||||||| ||| ||||||| ||||| |||||||||||||||||    
T  5381 acttagaattagtgaaggttagtcccacccttaccttagaattaatgatcggcggtctctctccctcttggttct 5455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 14972 - 15046
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||| | ||| ||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  14972 acttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttggttct 15046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 16992 - 17066
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||| | ||| ||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  16992 acttagaattatataagtttagtcccaccctcaccttagtattgatgatcgacggtctctctccctcttggttct 17066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 226
Target Start/End: Original strand, 15287 - 15361
Alignment:
Q  152 acttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||||| |||| |||||| |||||||||||| ||||||||| || || |||||||||||||||||    
T  15287 acttagaattagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctccctcttggttct 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 1147 - 1254
Alignment:
Q  119 aaaacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctc 218  Q
    |||||||| ||||  |||| ||| |||||||  ||||||||||||  || |||| || ||| ||||||||||||||||| |||| ||||| |||||||||    
T  1147 aaaacatgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttagtattgataatcggcggtctctctccctc 1246  T
Q  219 ttggttct 226  Q
    ||||||||    
T  1247 ttggttct 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 9073 - 9148
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||| |||||||  |||||||| |||||| |||||||||||||||||||||| ||||| |||||||| ||||||||    
T  9073 tactcagaattactgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctccctattggttct 9148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 11237 - 11312
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||| ||||||||||| ||||  | ||| |||||||||||||||||||||| ||||| |||||||||||||||||    
T  11237 tacttggaattagagaaagttagactcacccttaccttagtattgatgatcggcggtctctctccctcttggttct 11312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 1951 - 2026
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||||||| || |||| |||||| ||| ||||||||||||||||||  |||| |||||||||||||||||    
T  1951 tacttagaattagataaagttagtcccaccctttccttagtattgatgatcggtggtctctctccctcttggttct 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 16589 - 16693
Alignment:
Q  122 acatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttg 221  Q
    |||||||||| ||| | ||| ||| |||  ||||||||||||| ||  ||| |||||| |||  ||||||||||||||||| ||||| ||||||||||||    
T  16589 acatgttaaatccagtttcagaatcatacaacttagaattagataaatttagtcccaccctttgcttagtattgatgatcgtcggtctctctccctcttg 16688  T
Q  222 gttct 226  Q
    |||||    
T  16689 gttct 16693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 122 - 191
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||||    
T  122 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 226
Target Start/End: Original strand, 13651 - 13726
Alignment:
Q  151 tacttagaattagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||||||  |||||||| |||||| |||||| ||||||||||| ||  ||||| |||||||| ||||||||    
T  13651 tacttagaattattgaaggttactcccacccttaccgtagtattgatggtcagcggtctctctccctgttggttct 13726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 4923 - 4993
Alignment:
Q  121 aacatgttaaacccaa-tctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||||||| |||| ||||| |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  4923 aacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 4993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 2848 - 2942
Alignment:
Q  98 cctaattctcaaattcacaa-caa-aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||| ||||||||||| ||| |||||| ||||| |||| ||| |||||||  || || |||||||||| ||||||||||| ||||||||||    
T  2848 cctaattcacaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 764 - 695
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| | ||||||||    
T  764 aacatgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctaccttag 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 5325 - 5374
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctc 214  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  5325 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 12345 - 12394
Alignment:
Q  165 gaaggttaatcccacacttaccttagtattgatgatcgacggtccctctc 214  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  12345 gaaggttagtcccacccttaccttagtattgatgatcggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 5934 - 6003
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||||||||  |||| ||| |||||||  ||||||||||| ||||||||| |||||| ||||||||||    
T  5934 aacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttag 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 1189 - 1257
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  1189 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 536 - 468
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  536 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 1471 - 1527
Alignment:
Q  170 ttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    |||||||||| |||||||||||||||||||||| ||| |  ||||||| ||||||||    
T  1471 ttaatcccacccttaccttagtattgatgatcggcggcctgtctcccttttggttct 1527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 78253 - 78185
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  78253 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 24199 - 24131
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| |||||||||    
T  24199 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 4755 - 4708
Alignment:
Q  143 aattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||||| ||||||||||||||||| |||| |||||| ||||||||||    
T  4755 aattatactacttagaattagagaaagttagtcccacccttaccttag 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 23556 - 23623
Alignment:
Q  159 attagagaaggttaatcccacacttaccttagtattgatgatcgacggtccctctccctcttggttct 226  Q
    ||||||||| | || ||| || |||||||||||||||||||||| | ||| || ||||||||||||||    
T  23556 attagagaaagctagtcctacccttaccttagtattgatgatcggcagtctctttccctcttggttct 23623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 12601 - 12534
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctt 188  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||||    
T  12601 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttattcccacccttacctt 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 35474 - 35555
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcga 203  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||| |||||| |||||    
T  35474 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag-attgatcatcga 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 117851 - 117805
Alignment:
Q  145 ttatattacttagaattagagaaggttaatcccacacttaccttagt 191  Q
    |||||| |||||||||||||||| |||| |||||| |||||||||||    
T  117851 ttatatcacttagaattagagaaagttagtcccacccttaccttagt 117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 2539 - 2604
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacc 186  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| ||||||    
T  2539 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 10757 - 10846
Alignment:
Q  98 cctaattctcaaattcacaa-caa-aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttac 185  Q
    |||||||| ||||||||||| ||| |||||| ||||| |||| ||| |||||||  || || |||||||||| ||||||||||| |||||    
T  10757 cctaattcccaaattcacaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttac 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 13460 - 13391
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||| ||||||||||| |||| |||||| ||||||||||    
T  13460 aacatgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttaccttag 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 58730 - 58811
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttagtattgatgatcg 202  Q
    |||||| ||||| |||| ||| |||| ||  |||||||||||||||| |||| |||||| ||||||||| | | ||||||||    
T  58730 aacatgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaatttagatgatcg 58811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 169067 - 168998
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| |||||| | ||||||||    
T  169067 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctaccttag 168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 143595 - 143663
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  143595 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 77671 - 77740
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| ||||||||||    
T  77671 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 77740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 31978 - 32046
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  31978 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 37285 - 37353
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  37285 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 4782 - 4714
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| ||| || |||||||||    
T  4782 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttacctta 4714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 29640 - 29572
Alignment:
Q  122 acatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttaccttag 190  Q
    ||||| ||||| |||| ||| |||||||  ||||||||||| |||| |||| |||||| ||||||||||    
T  29640 acatgctaaactcaatttcagaattatacaacttagaattatagaaagttagtcccacccttaccttag 29572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 79033 - 79101
Alignment:
Q  121 aacatgttaaacccaatctcataattatattacttagaattagagaaggttaatcccacacttacctta 189  Q
    |||||| ||||| |||| ||| |||||||  |||||||||||||||| |||| || ||| |||||||||    
T  79033 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University