View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10325_high_24 (Length: 238)
Name: NF10325_high_24
Description: NF10325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10325_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 34330271 - 34330049
Alignment:
| Q |
1 |
ttcatcagaagctagctggaacagtcaacaaggtttgttatcacacccagcaggtgctatctcagttaacatcaaaaacccttcaaatccaaatcctaac |
100 |
Q |
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| T |
34330271 |
ttcatcagaagctagctggaacagtcaacaaggtttgttatcacacccagcaggtgctatctcagttaacatcaaaaacccttcaaatccaaatcctaac |
34330172 |
T |
|
| Q |
101 |
aacagcaacaaacacaaatcatcactttctaaaccaaattggtttttaaggagaaaatgtccctgcacaggtaaaaaatcagttcaagtcaatgnnnnnn |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34330171 |
aacagcaacaaacacaaatcatcactttctaaaccaaattggtttttaaggagaaaatgtccctgcacaggtaaaaaatcagttcaagtcaatgaaaaaa |
34330072 |
T |
|
| Q |
201 |
nnttaacagaattacccaaaaac |
223 |
Q |
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||||||||||||||||||||| |
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| T |
34330071 |
aattaacagaattacccaaaaac |
34330049 |
T |
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